HEADER TRANSFERASE 17-OCT-05 2BB3 TITLE CRYSTAL STRUCTURE OF COBALAMIN BIOSYNTHESIS PRECORRIN-6Y METHYLASE TITLE 2 (CBIE) FROM ARCHAEOGLOBUS FULGIDUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: COBALAMIN BIOSYNTHESIS PRECORRIN-6Y METHYLASE (CBIE); COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CBIE; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 224325; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BETA, ALPHA-BETA-ALPHA SANDWICH, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,A.JOACHIMIAK,X.XU,A.SAVCHENKO,A.EDWARDS,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 5 20-NOV-24 2BB3 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 2BB3 1 VERSN REVDAT 3 24-FEB-09 2BB3 1 VERSN REVDAT 2 06-DEC-05 2BB3 1 JRNL REVDAT 1 29-NOV-05 2BB3 0 JRNL AUTH Y.KIM,X.XU,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF COBALAMIN BIOSYNTHESIS PRECORRIN-6Y JRNL TITL 2 METHYLASE (CBIE) FROM ARCHAEOGLOBUS FULGIDUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1862364.670 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 19665 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1985 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2358 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 260 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3043 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.83000 REMARK 3 B22 (A**2) : 2.88000 REMARK 3 B33 (A**2) : -4.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.28 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.970 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.100 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.580 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.810 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.360 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.29 REMARK 3 BSOL : 40.79 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : SAH.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : SAH.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2BB3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1000034896. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22771 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 44.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.80800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 11% PEG10K, 2% REMARK 280 ISO-PROPANOL,10MM SAH, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.96600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.96600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.09550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.20900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.09550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.20900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.96600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.09550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.20900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.96600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.09550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.20900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE AUTHORS STATE THE REMARK 300 BIOLOGICAL UNIT COULD BE A DIMER. THE ASYMMETRIC UNIT REMARK 300 CONTAINS TWO "HALF DIMERS". REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 57.96600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 115.93200 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 288 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 ARG A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 HIS A 124 REMARK 465 ALA A 125 REMARK 465 LYS A 126 REMARK 465 ASP A 127 REMARK 465 MSE A 196 REMARK 465 GLU A 197 REMARK 465 GLY A 198 REMARK 465 SER A 199 REMARK 465 MSE B -21 REMARK 465 GLY B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 SER B -10 REMARK 465 GLY B -9 REMARK 465 ARG B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 SER B -2 REMARK 465 ALA B 125 REMARK 465 LYS B 126 REMARK 465 ASP B 127 REMARK 465 PHE B 128 REMARK 465 ASP B 129 REMARK 465 MSE B 196 REMARK 465 GLU B 197 REMARK 465 GLY B 198 REMARK 465 SER B 199 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE ARG A 110 O HOH A 257 2.11 REMARK 500 O GLN A 13 O HOH A 254 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 410 O HOH B 410 4556 1.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 78 34.33 -97.85 REMARK 500 GLU A 91 97.85 -65.59 REMARK 500 ASP A 92 -63.04 -96.99 REMARK 500 LEU A 132 -87.41 -89.70 REMARK 500 GLU A 134 -72.63 -60.75 REMARK 500 GLU A 152 -75.35 -45.88 REMARK 500 ARG A 153 1.48 -53.80 REMARK 500 ARG A 153 43.25 -80.87 REMARK 500 LEU A 154 -4.30 -161.17 REMARK 500 GLU A 183 -12.63 -146.85 REMARK 500 TYR A 186 72.12 -112.55 REMARK 500 HIS B 0 78.89 -102.72 REMARK 500 LEU B 132 -75.06 -102.81 REMARK 500 GLU B 134 -71.01 -69.41 REMARK 500 GLU B 183 -18.11 -143.32 REMARK 500 TYR B 186 72.18 -115.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5543 RELATED DB: TARGETDB DBREF 2BB3 A 1 197 UNP O29536 O29536_ARCFU 1 197 DBREF 2BB3 B 1 197 UNP O29536 O29536_ARCFU 1 197 SEQADV 2BB3 MSE A -21 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLY A -20 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER A -19 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER A -18 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A -17 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A -16 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A -15 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A -14 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A -13 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A -12 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER A -11 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER A -10 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLY A -9 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 ARG A -8 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLU A -7 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 ASN A -6 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 LEU A -5 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 TYR A -4 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 PHE A -3 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER A -2 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLY A -1 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS A 0 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 MSE A 1 UNP O29536 MET 1 MODIFIED RESIDUE SEQADV 2BB3 MSE A 61 UNP O29536 MET 61 MODIFIED RESIDUE SEQADV 2BB3 MSE A 78 UNP O29536 MET 78 MODIFIED RESIDUE SEQADV 2BB3 MSE A 167 UNP O29536 MET 167 MODIFIED RESIDUE SEQADV 2BB3 MSE A 196 UNP O29536 MET 196 MODIFIED RESIDUE SEQADV 2BB3 GLY A 198 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER A 199 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 MSE B -21 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLY B -20 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER B -19 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER B -18 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B -17 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B -16 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B -15 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B -14 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B -13 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B -12 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER B -11 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER B -10 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLY B -9 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 ARG B -8 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLU B -7 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 ASN B -6 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 LEU B -5 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 TYR B -4 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 PHE B -3 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER B -2 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 GLY B -1 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 HIS B 0 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 MSE B 1 UNP O29536 MET 1 MODIFIED RESIDUE SEQADV 2BB3 MSE B 61 UNP O29536 MET 61 MODIFIED RESIDUE SEQADV 2BB3 MSE B 78 UNP O29536 MET 78 MODIFIED RESIDUE SEQADV 2BB3 MSE B 167 UNP O29536 MET 167 MODIFIED RESIDUE SEQADV 2BB3 MSE B 196 UNP O29536 MET 196 MODIFIED RESIDUE SEQADV 2BB3 GLY B 198 UNP O29536 CLONING ARTIFACT SEQADV 2BB3 SER B 199 UNP O29536 CLONING ARTIFACT SEQRES 1 A 221 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 221 ARG GLU ASN LEU TYR PHE SER GLY HIS MSE ILE TRP ILE SEQRES 3 A 221 VAL GLY SER GLY THR CYS ARG GLY GLN THR THR GLU ARG SEQRES 4 A 221 ALA LYS GLU ILE ILE GLU ARG ALA GLU VAL ILE TYR GLY SEQRES 5 A 221 SER ARG ARG ALA LEU GLU LEU ALA GLY VAL VAL ASP ASP SEQRES 6 A 221 SER ARG ALA ARG ILE LEU ARG SER PHE LYS GLY ASP GLU SEQRES 7 A 221 ILE ARG ARG ILE MSE GLU GLU GLY ARG GLU ARG GLU VAL SEQRES 8 A 221 ALA VAL ILE SER THR GLY ASP PRO MSE VAL ALA GLY LEU SEQRES 9 A 221 GLY ARG VAL LEU ARG GLU ILE ALA GLU ASP VAL GLU ILE SEQRES 10 A 221 LYS ILE GLU PRO ALA ILE SER SER VAL GLN VAL ALA LEU SEQRES 11 A 221 ALA ARG LEU LYS VAL ASP LEU SER GLU VAL ALA VAL VAL SEQRES 12 A 221 ASP CYS HIS ALA LYS ASP PHE ASP ALA GLU LEU THR GLU SEQRES 13 A 221 LEU LEU LYS TYR ARG HIS LEU LEU ILE LEU ALA ASP SER SEQRES 14 A 221 HIS PHE PRO LEU GLU ARG LEU GLY LYS ARG ARG VAL VAL SEQRES 15 A 221 LEU LEU GLU ASN LEU CYS MSE GLU GLY GLU ARG ILE ARG SEQRES 16 A 221 GLU GLY ASN ALA ASP SER ILE GLU LEU GLU SER ASP TYR SEQRES 17 A 221 THR ILE ILE PHE VAL GLU ARG GLU VAL MSE GLU GLY SER SEQRES 1 B 221 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 221 ARG GLU ASN LEU TYR PHE SER GLY HIS MSE ILE TRP ILE SEQRES 3 B 221 VAL GLY SER GLY THR CYS ARG GLY GLN THR THR GLU ARG SEQRES 4 B 221 ALA LYS GLU ILE ILE GLU ARG ALA GLU VAL ILE TYR GLY SEQRES 5 B 221 SER ARG ARG ALA LEU GLU LEU ALA GLY VAL VAL ASP ASP SEQRES 6 B 221 SER ARG ALA ARG ILE LEU ARG SER PHE LYS GLY ASP GLU SEQRES 7 B 221 ILE ARG ARG ILE MSE GLU GLU GLY ARG GLU ARG GLU VAL SEQRES 8 B 221 ALA VAL ILE SER THR GLY ASP PRO MSE VAL ALA GLY LEU SEQRES 9 B 221 GLY ARG VAL LEU ARG GLU ILE ALA GLU ASP VAL GLU ILE SEQRES 10 B 221 LYS ILE GLU PRO ALA ILE SER SER VAL GLN VAL ALA LEU SEQRES 11 B 221 ALA ARG LEU LYS VAL ASP LEU SER GLU VAL ALA VAL VAL SEQRES 12 B 221 ASP CYS HIS ALA LYS ASP PHE ASP ALA GLU LEU THR GLU SEQRES 13 B 221 LEU LEU LYS TYR ARG HIS LEU LEU ILE LEU ALA ASP SER SEQRES 14 B 221 HIS PHE PRO LEU GLU ARG LEU GLY LYS ARG ARG VAL VAL SEQRES 15 B 221 LEU LEU GLU ASN LEU CYS MSE GLU GLY GLU ARG ILE ARG SEQRES 16 B 221 GLU GLY ASN ALA ASP SER ILE GLU LEU GLU SER ASP TYR SEQRES 17 B 221 THR ILE ILE PHE VAL GLU ARG GLU VAL MSE GLU GLY SER MODRES 2BB3 MSE A 1 MET SELENOMETHIONINE MODRES 2BB3 MSE A 61 MET SELENOMETHIONINE MODRES 2BB3 MSE A 78 MET SELENOMETHIONINE MODRES 2BB3 MSE A 167 MET SELENOMETHIONINE MODRES 2BB3 MSE B 1 MET SELENOMETHIONINE MODRES 2BB3 MSE B 61 MET SELENOMETHIONINE MODRES 2BB3 MSE B 78 MET SELENOMETHIONINE MODRES 2BB3 MSE B 167 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 61 8 HET MSE A 78 8 HET MSE A 167 8 HET MSE B 1 8 HET MSE B 61 8 HET MSE B 78 8 HET MSE B 167 8 HET SAH A 201 26 HET SAH B 203 26 HETNAM MSE SELENOMETHIONINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 5 HOH *180(H2 O) HELIX 1 1 THR A 15 ALA A 25 1 11 HELIX 2 2 SER A 31 ALA A 38 1 8 HELIX 3 3 LYS A 53 ARG A 67 1 15 HELIX 4 4 LEU A 82 GLU A 88 1 7 HELIX 5 5 SER A 102 LYS A 112 1 11 HELIX 6 6 ASP A 114 SER A 116 5 3 HELIX 7 7 ASP A 129 GLU A 134 1 6 HELIX 8 8 GLU A 134 ARG A 139 1 6 HELIX 9 9 LEU A 151 GLY A 155 5 5 HELIX 10 10 THR B 15 ALA B 25 1 11 HELIX 11 11 SER B 31 ALA B 38 1 8 HELIX 12 12 LYS B 53 ARG B 67 1 15 HELIX 13 13 LEU B 82 ARG B 87 1 6 HELIX 14 14 SER B 102 LYS B 112 1 11 HELIX 15 15 ASP B 114 SER B 116 5 3 HELIX 16 16 GLU B 134 TYR B 138 5 5 HELIX 17 17 PRO B 150 GLY B 155 5 6 HELIX 18 18 ASP B 178 ILE B 180 5 3 SHEET 1 A 5 ALA A 46 ILE A 48 0 SHEET 2 A 5 VAL A 27 GLY A 30 1 N ILE A 28 O ARG A 47 SHEET 3 A 5 VAL A 69 SER A 73 1 O ALA A 70 N TYR A 29 SHEET 4 A 5 MSE A 1 GLY A 6 1 N VAL A 5 O VAL A 71 SHEET 5 A 5 GLU A 94 GLU A 98 1 O GLU A 98 N ILE A 4 SHEET 1 B 5 VAL A 118 ASP A 122 0 SHEET 2 B 5 HIS A 140 ALA A 145 1 O LEU A 144 N VAL A 121 SHEET 3 B 5 THR A 187 VAL A 191 -1 O THR A 187 N ALA A 145 SHEET 4 B 5 ARG A 158 GLU A 163 -1 N VAL A 160 O PHE A 190 SHEET 5 B 5 ARG A 171 ASN A 176 -1 O GLY A 175 N VAL A 159 SHEET 1 C 5 ALA B 46 ILE B 48 0 SHEET 2 C 5 VAL B 27 GLY B 30 1 N ILE B 28 O ARG B 247 SHEET 3 C 5 VAL B 69 SER B 73 1 O ILE B 72 N TYR B 29 SHEET 4 C 5 MSE B 1 GLY B 6 1 N VAL B 5 O VAL B 71 SHEET 5 C 5 GLU B 94 GLU B 98 1 O GLU B 98 N ILE B 4 SHEET 1 D 5 VAL B 118 ASP B 122 0 SHEET 2 D 5 HIS B 140 ALA B 145 1 O LEU B 144 N VAL B 121 SHEET 3 D 5 THR B 187 VAL B 191 -1 O THR B 187 N ALA B 145 SHEET 4 D 5 ARG B 158 GLU B 163 -1 N VAL B 160 O PHE B 190 SHEET 5 D 5 ARG B 171 ASN B 176 -1 O GLY B 175 N VAL B 159 SSBOND 1 CYS A 10 CYS A 166 1555 1555 2.02 SSBOND 2 CYS B 10 CYS B 166 1555 1555 2.02 LINK C HIS A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C ILE A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N GLU A 62 1555 1555 1.33 LINK C PRO A 77 N MSE A 78 1555 1555 1.32 LINK C MSE A 78 N VAL A 79 1555 1555 1.33 LINK C CYS A 166 N MSE A 167 1555 1555 1.32 LINK C MSE A 167 N AGLU A 168 1555 1555 1.32 LINK C MSE A 167 N BGLU A 168 1555 1555 1.34 LINK C HIS B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N ILE B 2 1555 1555 1.33 LINK C ILE B 60 N MSE B 61 1555 1555 1.33 LINK C MSE B 61 N GLU B 62 1555 1555 1.33 LINK C PRO B 77 N MSE B 78 1555 1555 1.32 LINK C MSE B 78 N VAL B 79 1555 1555 1.34 LINK C CYS B 166 N MSE B 167 1555 1555 1.32 LINK C MSE B 167 N BGLU B 368 1555 1555 1.32 LINK C MSE B 167 N AGLU B 368 1555 1555 1.33 SITE 1 AC1 19 THR A 74 GLY A 75 ASP A 76 VAL A 79 SITE 2 AC1 19 ALA A 80 SER A 102 SER A 103 LEU A 144 SITE 3 AC1 19 ALA A 145 LEU A 165 MSE A 167 ASP A 185 SITE 4 AC1 19 TYR A 186 THR A 187 ILE A 188 HOH A 208 SITE 5 AC1 19 HOH A 213 HOH A 225 HOH A 292 SITE 1 AC2 17 THR B 74 GLY B 75 ASP B 76 VAL B 79 SITE 2 AC2 17 ALA B 80 SER B 102 SER B 103 LEU B 144 SITE 3 AC2 17 ALA B 145 LEU B 162 LEU B 165 MSE B 167 SITE 4 AC2 17 ASP B 185 TYR B 186 THR B 187 ILE B 188 SITE 5 AC2 17 HOH B 376 CRYST1 88.191 88.418 115.932 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011339 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011310 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008626 0.00000