data_2BCU # _entry.id 2BCU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2BCU pdb_00002bcu 10.2210/pdb2bcu/pdb NDB PD0724 ? ? RCSB RCSB034943 ? ? WWPDB D_1000034943 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2BCQ . unspecified PDB 2BCR . unspecified PDB 2BCS . unspecified PDB 2BCV . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BCU _pdbx_database_status.recvd_initial_deposition_date 2005-10-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Garcia-Diaz, M.' 1 'Bebenek, K.' 2 'Krahn, J.M.' 3 'Pedersen, L.C.' 4 'Kunkel, T.A.' 5 # _citation.id primary _citation.title 'Structural analysis of strand misalignment during DNA synthesis by a human DNA polymerase' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 124 _citation.page_first 331 _citation.page_last 342 _citation.year 2006 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16439207 _citation.pdbx_database_id_DOI 10.1016/j.cell.2005.10.039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Garcia-Diaz, M.' 1 ? primary 'Bebenek, K.' 2 ? primary 'Krahn, J.M.' 3 ? primary 'Pedersen, L.C.' 4 ? primary 'Kunkel, T.A.' 5 ? # _cell.entry_id 2BCU _cell.length_a 55.998 _cell.length_b 62.667 _cell.length_c 140.494 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BCU _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*GP*CP*CP*G)-3'" 1191.818 1 ? ? ? Template 2 polymer syn "5'-D(*CP*AP*GP*TP*TP*CP*G)-3'" 2113.410 1 ? ? ? Primer 3 polymer syn "5'-D(*CP*GP*GP*CP*CP*GP*AP*TP*AP*CP*TP*G)-3'" 3663.392 1 ? ? ? 'Downstream primer' 4 polymer man 'DNA polymerase lambda' 37479.750 1 '2.7.7.7, 4.2.99.-' ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 6 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 7 water nat water 18.015 245 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name 'Pol Lambda, DNA polymerase kappa, DNA polymerase beta-2, Pol beta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)' GCCG D ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DT)(DT)(DC)(DG)' CAGTTCG P ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DC)(DC)(DG)(DA)(DT)(DA)(DC)(DT)(DG)' CGGCCGATACTG T ? 4 'polypeptide(L)' no no ;MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESG HLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVF RLLGLPYREPAERDW ; ;MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESG HLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVF RLLGLPYREPAERDW ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DG n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DT n 2 5 DT n 2 6 DC n 2 7 DG n 3 1 DC n 3 2 DG n 3 3 DG n 3 4 DC n 3 5 DC n 3 6 DG n 3 7 DA n 3 8 DT n 3 9 DA n 3 10 DC n 3 11 DT n 3 12 DG n 4 1 MET n 4 2 ALA n 4 3 GLN n 4 4 PRO n 4 5 SER n 4 6 SER n 4 7 GLN n 4 8 LYS n 4 9 ALA n 4 10 THR n 4 11 ASN n 4 12 HIS n 4 13 ASN n 4 14 LEU n 4 15 HIS n 4 16 ILE n 4 17 THR n 4 18 GLU n 4 19 LYS n 4 20 LEU n 4 21 GLU n 4 22 VAL n 4 23 LEU n 4 24 ALA n 4 25 LYS n 4 26 ALA n 4 27 TYR n 4 28 SER n 4 29 VAL n 4 30 GLN n 4 31 GLY n 4 32 ASP n 4 33 LYS n 4 34 TRP n 4 35 ARG n 4 36 ALA n 4 37 LEU n 4 38 GLY n 4 39 TYR n 4 40 ALA n 4 41 LYS n 4 42 ALA n 4 43 ILE n 4 44 ASN n 4 45 ALA n 4 46 LEU n 4 47 LYS n 4 48 SER n 4 49 PHE n 4 50 HIS n 4 51 LYS n 4 52 PRO n 4 53 VAL n 4 54 THR n 4 55 SER n 4 56 TYR n 4 57 GLN n 4 58 GLU n 4 59 ALA n 4 60 CYS n 4 61 SER n 4 62 ILE n 4 63 PRO n 4 64 GLY n 4 65 ILE n 4 66 GLY n 4 67 LYS n 4 68 ARG n 4 69 MET n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ILE n 4 75 GLU n 4 76 ILE n 4 77 LEU n 4 78 GLU n 4 79 SER n 4 80 GLY n 4 81 HIS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 ASP n 4 87 HIS n 4 88 ILE n 4 89 SER n 4 90 GLU n 4 91 SER n 4 92 VAL n 4 93 PRO n 4 94 VAL n 4 95 LEU n 4 96 GLU n 4 97 LEU n 4 98 PHE n 4 99 SER n 4 100 ASN n 4 101 ILE n 4 102 TRP n 4 103 GLY n 4 104 ALA n 4 105 GLY n 4 106 THR n 4 107 LYS n 4 108 THR n 4 109 ALA n 4 110 GLN n 4 111 MET n 4 112 TRP n 4 113 TYR n 4 114 GLN n 4 115 GLN n 4 116 GLY n 4 117 PHE n 4 118 ARG n 4 119 SER n 4 120 LEU n 4 121 GLU n 4 122 ASP n 4 123 ILE n 4 124 ARG n 4 125 SER n 4 126 GLN n 4 127 ALA n 4 128 SER n 4 129 LEU n 4 130 THR n 4 131 THR n 4 132 GLN n 4 133 GLN n 4 134 ALA n 4 135 ILE n 4 136 GLY n 4 137 LEU n 4 138 LYS n 4 139 HIS n 4 140 TYR n 4 141 SER n 4 142 ASP n 4 143 PHE n 4 144 LEU n 4 145 GLU n 4 146 ARG n 4 147 MET n 4 148 PRO n 4 149 ARG n 4 150 GLU n 4 151 GLU n 4 152 ALA n 4 153 THR n 4 154 GLU n 4 155 ILE n 4 156 GLU n 4 157 GLN n 4 158 THR n 4 159 VAL n 4 160 GLN n 4 161 LYS n 4 162 ALA n 4 163 ALA n 4 164 GLN n 4 165 ALA n 4 166 PHE n 4 167 ASN n 4 168 SER n 4 169 GLY n 4 170 LEU n 4 171 LEU n 4 172 CYS n 4 173 VAL n 4 174 ALA n 4 175 CYS n 4 176 GLY n 4 177 SER n 4 178 TYR n 4 179 ARG n 4 180 ARG n 4 181 GLY n 4 182 LYS n 4 183 ALA n 4 184 THR n 4 185 CYS n 4 186 GLY n 4 187 ASP n 4 188 VAL n 4 189 ASP n 4 190 VAL n 4 191 LEU n 4 192 ILE n 4 193 THR n 4 194 HIS n 4 195 PRO n 4 196 ASP n 4 197 GLY n 4 198 ARG n 4 199 SER n 4 200 HIS n 4 201 ARG n 4 202 GLY n 4 203 ILE n 4 204 PHE n 4 205 SER n 4 206 ARG n 4 207 LEU n 4 208 LEU n 4 209 ASP n 4 210 SER n 4 211 LEU n 4 212 ARG n 4 213 GLN n 4 214 GLU n 4 215 GLY n 4 216 PHE n 4 217 LEU n 4 218 THR n 4 219 ASP n 4 220 ASP n 4 221 LEU n 4 222 VAL n 4 223 SER n 4 224 GLN n 4 225 GLU n 4 226 GLU n 4 227 ASN n 4 228 GLY n 4 229 GLN n 4 230 GLN n 4 231 GLN n 4 232 LYS n 4 233 TYR n 4 234 LEU n 4 235 GLY n 4 236 VAL n 4 237 CYS n 4 238 ARG n 4 239 LEU n 4 240 PRO n 4 241 GLY n 4 242 PRO n 4 243 GLY n 4 244 ARG n 4 245 ARG n 4 246 HIS n 4 247 ARG n 4 248 ARG n 4 249 LEU n 4 250 ASP n 4 251 ILE n 4 252 ILE n 4 253 VAL n 4 254 VAL n 4 255 PRO n 4 256 TYR n 4 257 SER n 4 258 GLU n 4 259 PHE n 4 260 ALA n 4 261 CYS n 4 262 ALA n 4 263 LEU n 4 264 LEU n 4 265 TYR n 4 266 PHE n 4 267 THR n 4 268 GLY n 4 269 SER n 4 270 ALA n 4 271 HIS n 4 272 PHE n 4 273 ASN n 4 274 ARG n 4 275 SER n 4 276 MET n 4 277 ARG n 4 278 ALA n 4 279 LEU n 4 280 ALA n 4 281 LYS n 4 282 THR n 4 283 LYS n 4 284 GLY n 4 285 MET n 4 286 SER n 4 287 LEU n 4 288 SER n 4 289 GLU n 4 290 HIS n 4 291 ALA n 4 292 LEU n 4 293 SER n 4 294 THR n 4 295 ALA n 4 296 VAL n 4 297 VAL n 4 298 ARG n 4 299 ASN n 4 300 THR n 4 301 HIS n 4 302 GLY n 4 303 CYS n 4 304 LYS n 4 305 VAL n 4 306 GLY n 4 307 PRO n 4 308 GLY n 4 309 ARG n 4 310 VAL n 4 311 LEU n 4 312 PRO n 4 313 THR n 4 314 PRO n 4 315 THR n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 VAL n 4 320 PHE n 4 321 ARG n 4 322 LEU n 4 323 LEU n 4 324 GLY n 4 325 LEU n 4 326 PRO n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 ALA n 4 332 GLU n 4 333 ARG n 4 334 ASP n 4 335 TRP n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP DPOLL_HUMAN Q9UGP5 4 242 ? ? 2 PDB 2BCU 2BCU 1 ? ? ? 3 PDB 2BCU 2BCU 2 ? ? ? 4 PDB 2BCU 2BCU 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2BCU A 2 ? 335 ? Q9UGP5 242 ? 575 ? 242 575 2 2 2BCU D 1 ? 4 ? 2BCU 1 ? 4 ? 1 4 3 3 2BCU P 1 ? 7 ? 2BCU 1 ? 7 ? 1 7 4 4 2BCU T 1 ? 12 ? 2BCU 1 ? 12 ? 1 12 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2BCU _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9UGP5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 241 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2BCU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details 'Sodium citrate, sodium cacodylate, 2-propanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Sodium citrate' ? ? ? 1 2 1 'sodium cacodylate' ? ? ? 1 3 1 2-propanol ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'Sodium citrate' ? ? ? 1 6 2 'sodium cacodylate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2BCU _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.18 _reflns.number_obs 25468 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 30.7 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.18 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 87.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2BCU _refine.ls_number_reflns_obs 24205 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 283992.98 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.03 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 93.8 _refine.ls_R_factor_obs 0.219 _refine.ls_R_factor_all 0.22 _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.247 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 1168 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 44.9 _refine.aniso_B[1][1] -7.12 _refine.aniso_B[2][2] 8.14 _refine.aniso_B[3][3] -1.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.31143 _refine.solvent_model_param_bsol 43.6599 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 1RZT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2BCU _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.27 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.34 _refine_analyze.Luzzati_sigma_a_free 0.30 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2501 _refine_hist.pdbx_number_atoms_nucleic_acid 466 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 245 _refine_hist.number_atoms_total 3224 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 40.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.93 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.41 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.36 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.73 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.96 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 3113 _refine_ls_shell.R_factor_R_work 0.298 _refine_ls_shell.percent_reflns_obs 76.4 _refine_ls_shell.R_factor_R_free 0.312 _refine_ls_shell.R_factor_R_free_error 0.026 _refine_ls_shell.percent_reflns_R_free 4.5 _refine_ls_shell.number_reflns_R_free 147 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 pars.file ion.top 'X-RAY DIFFRACTION' 5 ? tops.file 'X-RAY DIFFRACTION' # _struct.entry_id 2BCU _struct.title 'DNA polymerase lambda in complex with a DNA duplex containing an unpaired Damp and a T:T mismatch' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BCU _struct_keywords.pdbx_keywords 'Transferase, Lyase/DNA' _struct_keywords.text 'misalignment, extrahelical, mutagenesis, mutation, deletion, streisinger, slippage, Transferase, Lyase-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 7 ? J N N 7 ? K N N 7 ? L N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU D 18 ? GLN D 30 ? GLU A 258 GLN A 270 1 ? 13 HELX_P HELX_P2 2 ASP D 32 ? LYS D 47 ? ASP A 272 LYS A 287 1 ? 16 HELX_P HELX_P3 3 SER D 55 ? SER D 61 ? SER A 295 SER A 301 1 ? 7 HELX_P HELX_P4 4 GLY D 66 ? GLY D 80 ? GLY A 306 GLY A 320 1 ? 15 HELX_P HELX_P5 5 LEU D 82 ? ILE D 88 ? LEU A 322 ILE A 328 5 ? 7 HELX_P HELX_P6 6 SER D 91 ? ASN D 100 ? SER A 331 ASN A 340 1 ? 10 HELX_P HELX_P7 7 GLY D 105 ? GLN D 115 ? GLY A 345 GLN A 355 1 ? 11 HELX_P HELX_P8 8 SER D 119 ? ALA D 127 ? SER A 359 ALA A 367 1 ? 9 HELX_P HELX_P9 9 THR D 130 ? HIS D 139 ? THR A 370 HIS A 379 1 ? 10 HELX_P HELX_P10 10 SER D 141 ? GLU D 145 ? SER A 381 GLU A 385 5 ? 5 HELX_P HELX_P11 11 ARG D 149 ? ASN D 167 ? ARG A 389 ASN A 407 1 ? 19 HELX_P HELX_P12 12 CYS D 175 ? ARG D 180 ? CYS A 415 ARG A 420 1 ? 6 HELX_P HELX_P13 13 ILE D 203 ? GLU D 214 ? ILE A 443 GLU A 454 1 ? 12 HELX_P HELX_P14 14 PRO D 255 ? SER D 257 ? PRO A 495 SER A 497 5 ? 3 HELX_P HELX_P15 15 GLU D 258 ? GLY D 268 ? GLU A 498 GLY A 508 1 ? 11 HELX_P HELX_P16 16 SER D 269 ? LYS D 283 ? SER A 509 LYS A 523 1 ? 15 HELX_P HELX_P17 17 THR D 315 ? LEU D 323 ? THR A 555 LEU A 563 1 ? 9 HELX_P HELX_P18 18 GLU D 329 ? ARG D 333 ? GLU A 569 ARG A 573 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B DT 5 OP1 ? ? ? 1_555 F NA . NA ? ? P DT 5 A NA 577 1_555 ? ? ? ? ? ? ? 2.275 ? ? metalc2 metalc ? ? B DG 7 OP1 ? ? ? 1_555 E NA . NA ? ? P DG 7 A NA 576 1_555 ? ? ? ? ? ? ? 2.681 ? ? metalc3 metalc ? ? J HOH . O ? ? ? 1_555 F NA . NA ? ? P HOH 95 A NA 577 1_555 ? ? ? ? ? ? ? 2.666 ? ? metalc4 metalc ? ? K HOH . O ? ? ? 1_555 G NA . NA ? ? T HOH 24 A NA 578 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc5 metalc ? ? K HOH . O ? ? ? 1_555 G NA . NA ? ? T HOH 41 A NA 578 1_555 ? ? ? ? ? ? ? 2.679 ? ? metalc6 metalc ? ? D SER 99 O ? ? ? 1_555 F NA . NA ? ? A SER 339 A NA 577 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc7 metalc ? ? D ILE 101 O ? ? ? 1_555 F NA . NA ? ? A ILE 341 A NA 577 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc8 metalc ? ? D ALA 104 O ? ? ? 1_555 F NA . NA ? ? A ALA 344 A NA 577 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc9 metalc ? ? D ASP 187 OD1 ? ? ? 1_555 E NA . NA ? ? A ASP 427 A NA 576 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc10 metalc ? ? D ASP 189 OD2 ? ? ? 1_555 E NA . NA ? ? A ASP 429 A NA 576 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc11 metalc ? ? D SER 223 O ? ? ? 1_555 G NA . NA ? ? A SER 463 A NA 578 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc12 metalc ? ? E NA . NA ? ? ? 1_555 H PPV . O12 ? ? A NA 576 A PPV 579 1_555 ? ? ? ? ? ? ? 2.258 ? ? metalc13 metalc ? ? E NA . NA ? ? ? 1_555 H PPV . O22 ? ? A NA 576 A PPV 579 1_555 ? ? ? ? ? ? ? 2.935 ? ? metalc14 metalc ? ? E NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 576 A HOH 601 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc15 metalc ? ? E NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 576 A HOH 603 1_555 ? ? ? ? ? ? ? 2.707 ? ? metalc16 metalc ? ? F NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 577 A HOH 611 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc17 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 578 A HOH 692 1_555 ? ? ? ? ? ? ? 2.798 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 C DC 4 N3 ? ? D DG 1 T DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 C DC 4 O2 ? ? D DG 1 T DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 C DC 4 N4 ? ? D DG 1 T DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 3 N1 ? ? D DC 2 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 3 O6 ? ? D DC 2 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 3 N2 ? ? D DC 2 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 C DG 2 N1 ? ? D DC 3 T DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 C DG 2 O6 ? ? D DC 3 T DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 C DG 2 N2 ? ? D DC 3 T DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 C DC 1 N3 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 C DC 1 O2 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 C DC 1 N4 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? P DC 1 T DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? P DC 1 T DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? P DC 1 T DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 11 N3 ? ? P DA 2 T DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 11 O4 ? ? P DA 2 T DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 10 N3 ? ? P DG 3 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 10 O2 ? ? P DG 3 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 10 N4 ? ? P DG 3 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? P DT 4 T DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? P DT 4 T DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DT 8 O4 ? ? P DT 5 T DT 8 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog24 hydrog ? ? B DT 5 O2 ? ? ? 1_555 C DT 8 N3 ? ? P DT 5 T DT 8 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog25 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 6 N1 ? ? P DC 6 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 6 O6 ? ? P DC 6 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 6 N2 ? ? P DC 6 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 5 N3 ? ? P DG 7 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 5 O2 ? ? P DG 7 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 5 N4 ? ? P DG 7 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 268 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 508 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 269 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 509 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET D 147 ? PRO D 148 ? MET A 387 PRO A 388 A 2 THR D 184 ? CYS D 185 ? THR A 424 CYS A 425 B 1 LEU D 171 ? ALA D 174 ? LEU A 411 ALA A 414 B 2 VAL D 188 ? THR D 193 ? VAL A 428 THR A 433 B 3 ARG D 247 ? VAL D 253 ? ARG A 487 VAL A 493 B 4 LYS D 232 ? CYS D 237 ? LYS A 472 CYS A 477 B 5 LEU D 217 ? VAL D 222 ? LEU A 457 VAL A 462 C 1 SER D 286 ? LEU D 287 ? SER A 526 LEU A 527 C 2 LEU D 292 ? THR D 294 ? LEU A 532 THR A 534 C 3 ARG D 309 ? VAL D 310 ? ARG A 549 VAL A 550 D 1 VAL D 297 ? ARG D 298 ? VAL A 537 ARG A 538 D 2 LYS D 304 ? GLY D 306 ? LYS A 544 GLY A 546 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET D 147 ? N MET A 387 O CYS D 185 ? O CYS A 425 B 1 2 N VAL D 173 ? N VAL A 413 O LEU D 191 ? O LEU A 431 B 2 3 N VAL D 188 ? N VAL A 428 O ASP D 250 ? O ASP A 490 B 3 4 O ARG D 247 ? O ARG A 487 N CYS D 237 ? N CYS A 477 B 4 5 O VAL D 236 ? O VAL A 476 N THR D 218 ? N THR A 458 C 1 2 N SER D 286 ? N SER A 526 O SER D 293 ? O SER A 533 C 2 3 N THR D 294 ? N THR A 534 O ARG D 309 ? O ARG A 549 D 1 2 N VAL D 297 ? N VAL A 537 O VAL D 305 ? O VAL A 545 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 576 ? 6 'BINDING SITE FOR RESIDUE NA A 576' AC2 Software A NA 577 ? 6 'BINDING SITE FOR RESIDUE NA A 577' AC3 Software A NA 578 ? 5 'BINDING SITE FOR RESIDUE NA A 578' AC4 Software A PPV 579 ? 13 'BINDING SITE FOR RESIDUE PPV A 579' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP D 187 ? ASP A 427 . ? 1_555 ? 2 AC1 6 ASP D 189 ? ASP A 429 . ? 1_555 ? 3 AC1 6 PPV H . ? PPV A 579 . ? 1_555 ? 4 AC1 6 HOH L . ? HOH A 601 . ? 1_555 ? 5 AC1 6 HOH L . ? HOH A 603 . ? 1_555 ? 6 AC1 6 DG B 7 ? DG P 7 . ? 1_555 ? 7 AC2 6 SER D 99 ? SER A 339 . ? 1_555 ? 8 AC2 6 ILE D 101 ? ILE A 341 . ? 1_555 ? 9 AC2 6 ALA D 104 ? ALA A 344 . ? 1_555 ? 10 AC2 6 HOH L . ? HOH A 611 . ? 1_555 ? 11 AC2 6 DT B 5 ? DT P 5 . ? 1_555 ? 12 AC2 6 HOH J . ? HOH P 95 . ? 1_555 ? 13 AC3 5 SER D 223 ? SER A 463 . ? 1_555 ? 14 AC3 5 HOH L . ? HOH A 692 . ? 1_555 ? 15 AC3 5 DT C 11 ? DT T 11 . ? 1_555 ? 16 AC3 5 HOH K . ? HOH T 24 . ? 1_555 ? 17 AC3 5 HOH K . ? HOH T 41 . ? 1_555 ? 18 AC4 13 ARG D 146 ? ARG A 386 . ? 1_555 ? 19 AC4 13 GLY D 176 ? GLY A 416 . ? 1_555 ? 20 AC4 13 SER D 177 ? SER A 417 . ? 1_555 ? 21 AC4 13 ARG D 180 ? ARG A 420 . ? 1_555 ? 22 AC4 13 GLY D 186 ? GLY A 426 . ? 1_555 ? 23 AC4 13 ASP D 189 ? ASP A 429 . ? 1_555 ? 24 AC4 13 NA E . ? NA A 576 . ? 1_555 ? 25 AC4 13 HOH L . ? HOH A 590 . ? 1_555 ? 26 AC4 13 HOH L . ? HOH A 601 . ? 1_555 ? 27 AC4 13 HOH L . ? HOH A 642 . ? 1_555 ? 28 AC4 13 HOH L . ? HOH A 697 . ? 1_555 ? 29 AC4 13 HOH L . ? HOH A 758 . ? 1_555 ? 30 AC4 13 DG B 7 ? DG P 7 . ? 1_555 ? # _database_PDB_matrix.entry_id 2BCU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2BCU _atom_sites.fract_transf_matrix[1][1] 0.017858 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015957 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007118 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G D . n A 1 2 DC 2 2 2 DC C D . n A 1 3 DC 3 3 3 DC C D . n A 1 4 DG 4 4 4 DG G D . n B 2 1 DC 1 1 1 DC C P . n B 2 2 DA 2 2 2 DA A P . n B 2 3 DG 3 3 3 DG G P . n B 2 4 DT 4 4 4 DT T P . n B 2 5 DT 5 5 5 DT T P . n B 2 6 DC 6 6 6 DC C P . n B 2 7 DG 7 7 7 DG G P . n C 3 1 DC 1 1 1 DC C T . n C 3 2 DG 2 2 2 DG G T . n C 3 3 DG 3 3 3 DG G T . n C 3 4 DC 4 4 4 DC C T . n C 3 5 DC 5 5 5 DC C T . n C 3 6 DG 6 6 6 DG G T . n C 3 7 DA 7 7 7 DA A T . n C 3 8 DT 8 8 8 DT T T . n C 3 9 DA 9 9 9 DA A T . n C 3 10 DC 10 10 10 DC C T . n C 3 11 DT 11 11 11 DT T T . n C 3 12 DG 12 12 12 DG G T . n D 4 1 MET 1 241 ? ? ? A . n D 4 2 ALA 2 242 ? ? ? A . n D 4 3 GLN 3 243 ? ? ? A . n D 4 4 PRO 4 244 ? ? ? A . n D 4 5 SER 5 245 ? ? ? A . n D 4 6 SER 6 246 ? ? ? A . n D 4 7 GLN 7 247 ? ? ? A . n D 4 8 LYS 8 248 ? ? ? A . n D 4 9 ALA 9 249 ? ? ? A . n D 4 10 THR 10 250 250 THR ALA A . n D 4 11 ASN 11 251 251 ASN ALA A . n D 4 12 HIS 12 252 252 HIS ALA A . n D 4 13 ASN 13 253 253 ASN ASN A . n D 4 14 LEU 14 254 254 LEU LEU A . n D 4 15 HIS 15 255 255 HIS ALA A . n D 4 16 ILE 16 256 256 ILE ILE A . n D 4 17 THR 17 257 257 THR THR A . n D 4 18 GLU 18 258 258 GLU GLU A . n D 4 19 LYS 19 259 259 LYS LYS A . n D 4 20 LEU 20 260 260 LEU LEU A . n D 4 21 GLU 21 261 261 GLU GLU A . n D 4 22 VAL 22 262 262 VAL VAL A . n D 4 23 LEU 23 263 263 LEU LEU A . n D 4 24 ALA 24 264 264 ALA ALA A . n D 4 25 LYS 25 265 265 LYS ALA A . n D 4 26 ALA 26 266 266 ALA ALA A . n D 4 27 TYR 27 267 267 TYR TYR A . n D 4 28 SER 28 268 268 SER SER A . n D 4 29 VAL 29 269 269 VAL VAL A . n D 4 30 GLN 30 270 270 GLN GLN A . n D 4 31 GLY 31 271 271 GLY GLY A . n D 4 32 ASP 32 272 272 ASP ASP A . n D 4 33 LYS 33 273 273 LYS LYS A . n D 4 34 TRP 34 274 274 TRP TRP A . n D 4 35 ARG 35 275 275 ARG ARG A . n D 4 36 ALA 36 276 276 ALA ALA A . n D 4 37 LEU 37 277 277 LEU LEU A . n D 4 38 GLY 38 278 278 GLY GLY A . n D 4 39 TYR 39 279 279 TYR TYR A . n D 4 40 ALA 40 280 280 ALA ALA A . n D 4 41 LYS 41 281 281 LYS LYS A . n D 4 42 ALA 42 282 282 ALA ALA A . n D 4 43 ILE 43 283 283 ILE ILE A . n D 4 44 ASN 44 284 284 ASN ASN A . n D 4 45 ALA 45 285 285 ALA ALA A . n D 4 46 LEU 46 286 286 LEU LEU A . n D 4 47 LYS 47 287 287 LYS ALA A . n D 4 48 SER 48 288 288 SER SER A . n D 4 49 PHE 49 289 289 PHE PHE A . n D 4 50 HIS 50 290 290 HIS HIS A . n D 4 51 LYS 51 291 291 LYS LYS A . n D 4 52 PRO 52 292 292 PRO PRO A . n D 4 53 VAL 53 293 293 VAL ALA A . n D 4 54 THR 54 294 294 THR THR A . n D 4 55 SER 55 295 295 SER SER A . n D 4 56 TYR 56 296 296 TYR TYR A . n D 4 57 GLN 57 297 297 GLN ALA A . n D 4 58 GLU 58 298 298 GLU GLU A . n D 4 59 ALA 59 299 299 ALA ALA A . n D 4 60 CYS 60 300 300 CYS CYS A . n D 4 61 SER 61 301 301 SER SER A . n D 4 62 ILE 62 302 302 ILE ILE A . n D 4 63 PRO 63 303 303 PRO PRO A . n D 4 64 GLY 64 304 304 GLY GLY A . n D 4 65 ILE 65 305 305 ILE ILE A . n D 4 66 GLY 66 306 306 GLY GLY A . n D 4 67 LYS 67 307 307 LYS ALA A . n D 4 68 ARG 68 308 308 ARG ARG A . n D 4 69 MET 69 309 309 MET MET A . n D 4 70 ALA 70 310 310 ALA ALA A . n D 4 71 GLU 71 311 311 GLU GLU A . n D 4 72 LYS 72 312 312 LYS LYS A . n D 4 73 ILE 73 313 313 ILE ILE A . n D 4 74 ILE 74 314 314 ILE ILE A . n D 4 75 GLU 75 315 315 GLU GLU A . n D 4 76 ILE 76 316 316 ILE ILE A . n D 4 77 LEU 77 317 317 LEU ALA A . n D 4 78 GLU 78 318 318 GLU GLU A . n D 4 79 SER 79 319 319 SER SER A . n D 4 80 GLY 80 320 320 GLY GLY A . n D 4 81 HIS 81 321 321 HIS HIS A . n D 4 82 LEU 82 322 322 LEU LEU A . n D 4 83 ARG 83 323 323 ARG ALA A . n D 4 84 LYS 84 324 324 LYS LYS A . n D 4 85 LEU 85 325 325 LEU LEU A . n D 4 86 ASP 86 326 326 ASP ASP A . n D 4 87 HIS 87 327 327 HIS HIS A . n D 4 88 ILE 88 328 328 ILE ILE A . n D 4 89 SER 89 329 329 SER SER A . n D 4 90 GLU 90 330 330 GLU GLU A . n D 4 91 SER 91 331 331 SER SER A . n D 4 92 VAL 92 332 332 VAL VAL A . n D 4 93 PRO 93 333 333 PRO PRO A . n D 4 94 VAL 94 334 334 VAL VAL A . n D 4 95 LEU 95 335 335 LEU LEU A . n D 4 96 GLU 96 336 336 GLU GLU A . n D 4 97 LEU 97 337 337 LEU LEU A . n D 4 98 PHE 98 338 338 PHE PHE A . n D 4 99 SER 99 339 339 SER SER A . n D 4 100 ASN 100 340 340 ASN ASN A . n D 4 101 ILE 101 341 341 ILE ILE A . n D 4 102 TRP 102 342 342 TRP TRP A . n D 4 103 GLY 103 343 343 GLY GLY A . n D 4 104 ALA 104 344 344 ALA ALA A . n D 4 105 GLY 105 345 345 GLY GLY A . n D 4 106 THR 106 346 346 THR THR A . n D 4 107 LYS 107 347 347 LYS LYS A . n D 4 108 THR 108 348 348 THR THR A . n D 4 109 ALA 109 349 349 ALA ALA A . n D 4 110 GLN 110 350 350 GLN GLN A . n D 4 111 MET 111 351 351 MET MET A . n D 4 112 TRP 112 352 352 TRP TRP A . n D 4 113 TYR 113 353 353 TYR TYR A . n D 4 114 GLN 114 354 354 GLN GLN A . n D 4 115 GLN 115 355 355 GLN GLN A . n D 4 116 GLY 116 356 356 GLY GLY A . n D 4 117 PHE 117 357 357 PHE PHE A . n D 4 118 ARG 118 358 358 ARG ARG A . n D 4 119 SER 119 359 359 SER SER A . n D 4 120 LEU 120 360 360 LEU LEU A . n D 4 121 GLU 121 361 361 GLU GLU A . n D 4 122 ASP 122 362 362 ASP ASP A . n D 4 123 ILE 123 363 363 ILE ILE A . n D 4 124 ARG 124 364 364 ARG ARG A . n D 4 125 SER 125 365 365 SER SER A . n D 4 126 GLN 126 366 366 GLN GLN A . n D 4 127 ALA 127 367 367 ALA ALA A . n D 4 128 SER 128 368 368 SER SER A . n D 4 129 LEU 129 369 369 LEU LEU A . n D 4 130 THR 130 370 370 THR THR A . n D 4 131 THR 131 371 371 THR THR A . n D 4 132 GLN 132 372 372 GLN GLN A . n D 4 133 GLN 133 373 373 GLN GLN A . n D 4 134 ALA 134 374 374 ALA ALA A . n D 4 135 ILE 135 375 375 ILE ILE A . n D 4 136 GLY 136 376 376 GLY GLY A . n D 4 137 LEU 137 377 377 LEU LEU A . n D 4 138 LYS 138 378 378 LYS LYS A . n D 4 139 HIS 139 379 379 HIS HIS A . n D 4 140 TYR 140 380 380 TYR TYR A . n D 4 141 SER 141 381 381 SER SER A . n D 4 142 ASP 142 382 382 ASP ASP A . n D 4 143 PHE 143 383 383 PHE PHE A . n D 4 144 LEU 144 384 384 LEU LEU A . n D 4 145 GLU 145 385 385 GLU GLU A . n D 4 146 ARG 146 386 386 ARG ARG A . n D 4 147 MET 147 387 387 MET MET A . n D 4 148 PRO 148 388 388 PRO PRO A . n D 4 149 ARG 149 389 389 ARG ARG A . n D 4 150 GLU 150 390 390 GLU GLU A . n D 4 151 GLU 151 391 391 GLU GLU A . n D 4 152 ALA 152 392 392 ALA ALA A . n D 4 153 THR 153 393 393 THR THR A . n D 4 154 GLU 154 394 394 GLU GLU A . n D 4 155 ILE 155 395 395 ILE ILE A . n D 4 156 GLU 156 396 396 GLU GLU A . n D 4 157 GLN 157 397 397 GLN GLN A . n D 4 158 THR 158 398 398 THR THR A . n D 4 159 VAL 159 399 399 VAL VAL A . n D 4 160 GLN 160 400 400 GLN GLN A . n D 4 161 LYS 161 401 401 LYS LYS A . n D 4 162 ALA 162 402 402 ALA ALA A . n D 4 163 ALA 163 403 403 ALA ALA A . n D 4 164 GLN 164 404 404 GLN GLN A . n D 4 165 ALA 165 405 405 ALA ALA A . n D 4 166 PHE 166 406 406 PHE PHE A . n D 4 167 ASN 167 407 407 ASN ASN A . n D 4 168 SER 168 408 408 SER SER A . n D 4 169 GLY 169 409 409 GLY GLY A . n D 4 170 LEU 170 410 410 LEU LEU A . n D 4 171 LEU 171 411 411 LEU LEU A . n D 4 172 CYS 172 412 412 CYS CYS A . n D 4 173 VAL 173 413 413 VAL VAL A . n D 4 174 ALA 174 414 414 ALA ALA A . n D 4 175 CYS 175 415 415 CYS CYS A . n D 4 176 GLY 176 416 416 GLY GLY A . n D 4 177 SER 177 417 417 SER SER A . n D 4 178 TYR 178 418 418 TYR TYR A . n D 4 179 ARG 179 419 419 ARG ARG A . n D 4 180 ARG 180 420 420 ARG ARG A . n D 4 181 GLY 181 421 421 GLY GLY A . n D 4 182 LYS 182 422 422 LYS LYS A . n D 4 183 ALA 183 423 423 ALA ALA A . n D 4 184 THR 184 424 424 THR THR A . n D 4 185 CYS 185 425 425 CYS CYS A . n D 4 186 GLY 186 426 426 GLY GLY A . n D 4 187 ASP 187 427 427 ASP ASP A . n D 4 188 VAL 188 428 428 VAL VAL A . n D 4 189 ASP 189 429 429 ASP ASP A . n D 4 190 VAL 190 430 430 VAL VAL A . n D 4 191 LEU 191 431 431 LEU LEU A . n D 4 192 ILE 192 432 432 ILE ILE A . n D 4 193 THR 193 433 433 THR THR A . n D 4 194 HIS 194 434 434 HIS HIS A . n D 4 195 PRO 195 435 435 PRO PRO A . n D 4 196 ASP 196 436 436 ASP ASP A . n D 4 197 GLY 197 437 437 GLY GLY A . n D 4 198 ARG 198 438 438 ARG ALA A . n D 4 199 SER 199 439 439 SER SER A . n D 4 200 HIS 200 440 440 HIS HIS A . n D 4 201 ARG 201 441 441 ARG ALA A . n D 4 202 GLY 202 442 442 GLY GLY A . n D 4 203 ILE 203 443 443 ILE ILE A . n D 4 204 PHE 204 444 444 PHE PHE A . n D 4 205 SER 205 445 445 SER SER A . n D 4 206 ARG 206 446 446 ARG ARG A . n D 4 207 LEU 207 447 447 LEU LEU A . n D 4 208 LEU 208 448 448 LEU LEU A . n D 4 209 ASP 209 449 449 ASP ASP A . n D 4 210 SER 210 450 450 SER SER A . n D 4 211 LEU 211 451 451 LEU LEU A . n D 4 212 ARG 212 452 452 ARG ARG A . n D 4 213 GLN 213 453 453 GLN GLN A . n D 4 214 GLU 214 454 454 GLU GLU A . n D 4 215 GLY 215 455 455 GLY GLY A . n D 4 216 PHE 216 456 456 PHE PHE A . n D 4 217 LEU 217 457 457 LEU LEU A . n D 4 218 THR 218 458 458 THR THR A . n D 4 219 ASP 219 459 459 ASP ASP A . n D 4 220 ASP 220 460 460 ASP ASP A . n D 4 221 LEU 221 461 461 LEU LEU A . n D 4 222 VAL 222 462 462 VAL VAL A . n D 4 223 SER 223 463 463 SER SER A . n D 4 224 GLN 224 464 464 GLN GLN A . n D 4 225 GLU 225 465 465 GLU GLU A . n D 4 226 GLU 226 466 466 GLU GLU A . n D 4 227 ASN 227 467 467 ASN ASN A . n D 4 228 GLY 228 468 468 GLY GLY A . n D 4 229 GLN 229 469 469 GLN GLN A . n D 4 230 GLN 230 470 470 GLN GLN A . n D 4 231 GLN 231 471 471 GLN GLN A . n D 4 232 LYS 232 472 472 LYS LYS A . n D 4 233 TYR 233 473 473 TYR TYR A . n D 4 234 LEU 234 474 474 LEU LEU A . n D 4 235 GLY 235 475 475 GLY GLY A . n D 4 236 VAL 236 476 476 VAL VAL A . n D 4 237 CYS 237 477 477 CYS CYS A . n D 4 238 ARG 238 478 478 ARG ARG A . n D 4 239 LEU 239 479 479 LEU LEU A . n D 4 240 PRO 240 480 480 PRO PRO A . n D 4 241 GLY 241 481 481 GLY GLY A . n D 4 242 PRO 242 482 482 PRO PRO A . n D 4 243 GLY 243 483 483 GLY GLY A . n D 4 244 ARG 244 484 484 ARG ARG A . n D 4 245 ARG 245 485 485 ARG ARG A . n D 4 246 HIS 246 486 486 HIS HIS A . n D 4 247 ARG 247 487 487 ARG ARG A . n D 4 248 ARG 248 488 488 ARG ARG A . n D 4 249 LEU 249 489 489 LEU LEU A . n D 4 250 ASP 250 490 490 ASP ASP A . n D 4 251 ILE 251 491 491 ILE ILE A . n D 4 252 ILE 252 492 492 ILE ILE A . n D 4 253 VAL 253 493 493 VAL VAL A . n D 4 254 VAL 254 494 494 VAL VAL A . n D 4 255 PRO 255 495 495 PRO PRO A . n D 4 256 TYR 256 496 496 TYR TYR A . n D 4 257 SER 257 497 497 SER SER A . n D 4 258 GLU 258 498 498 GLU GLU A . n D 4 259 PHE 259 499 499 PHE PHE A . n D 4 260 ALA 260 500 500 ALA ALA A . n D 4 261 CYS 261 501 501 CYS CYS A . n D 4 262 ALA 262 502 502 ALA ALA A . n D 4 263 LEU 263 503 503 LEU LEU A . n D 4 264 LEU 264 504 504 LEU LEU A . n D 4 265 TYR 265 505 505 TYR TYR A . n D 4 266 PHE 266 506 506 PHE PHE A . n D 4 267 THR 267 507 507 THR THR A . n D 4 268 GLY 268 508 508 GLY GLY A . n D 4 269 SER 269 509 509 SER SER A . n D 4 270 ALA 270 510 510 ALA ALA A . n D 4 271 HIS 271 511 511 HIS HIS A . n D 4 272 PHE 272 512 512 PHE PHE A . n D 4 273 ASN 273 513 513 ASN ASN A . n D 4 274 ARG 274 514 514 ARG ARG A . n D 4 275 SER 275 515 515 SER SER A . n D 4 276 MET 276 516 516 MET MET A . n D 4 277 ARG 277 517 517 ARG ARG A . n D 4 278 ALA 278 518 518 ALA ALA A . n D 4 279 LEU 279 519 519 LEU LEU A . n D 4 280 ALA 280 520 520 ALA ALA A . n D 4 281 LYS 281 521 521 LYS LYS A . n D 4 282 THR 282 522 522 THR THR A . n D 4 283 LYS 283 523 523 LYS LYS A . n D 4 284 GLY 284 524 524 GLY GLY A . n D 4 285 MET 285 525 525 MET MET A . n D 4 286 SER 286 526 526 SER SER A . n D 4 287 LEU 287 527 527 LEU LEU A . n D 4 288 SER 288 528 528 SER SER A . n D 4 289 GLU 289 529 529 GLU GLU A . n D 4 290 HIS 290 530 530 HIS HIS A . n D 4 291 ALA 291 531 531 ALA ALA A . n D 4 292 LEU 292 532 532 LEU LEU A . n D 4 293 SER 293 533 533 SER SER A . n D 4 294 THR 294 534 534 THR THR A . n D 4 295 ALA 295 535 535 ALA ALA A . n D 4 296 VAL 296 536 536 VAL VAL A . n D 4 297 VAL 297 537 537 VAL VAL A . n D 4 298 ARG 298 538 538 ARG ARG A . n D 4 299 ASN 299 539 539 ASN ASN A . n D 4 300 THR 300 540 540 THR THR A . n D 4 301 HIS 301 541 541 HIS HIS A . n D 4 302 GLY 302 542 542 GLY GLY A . n D 4 303 CYS 303 543 543 CYS ALA A . n D 4 304 LYS 304 544 544 LYS LYS A . n D 4 305 VAL 305 545 545 VAL ALA A . n D 4 306 GLY 306 546 546 GLY GLY A . n D 4 307 PRO 307 547 547 PRO PRO A . n D 4 308 GLY 308 548 548 GLY GLY A . n D 4 309 ARG 309 549 549 ARG ARG A . n D 4 310 VAL 310 550 550 VAL VAL A . n D 4 311 LEU 311 551 551 LEU LEU A . n D 4 312 PRO 312 552 552 PRO PRO A . n D 4 313 THR 313 553 553 THR THR A . n D 4 314 PRO 314 554 554 PRO PRO A . n D 4 315 THR 315 555 555 THR THR A . n D 4 316 GLU 316 556 556 GLU GLU A . n D 4 317 LYS 317 557 557 LYS LYS A . n D 4 318 ASP 318 558 558 ASP ASP A . n D 4 319 VAL 319 559 559 VAL VAL A . n D 4 320 PHE 320 560 560 PHE PHE A . n D 4 321 ARG 321 561 561 ARG ARG A . n D 4 322 LEU 322 562 562 LEU LEU A . n D 4 323 LEU 323 563 563 LEU LEU A . n D 4 324 GLY 324 564 564 GLY GLY A . n D 4 325 LEU 325 565 565 LEU LEU A . n D 4 326 PRO 326 566 566 PRO PRO A . n D 4 327 TYR 327 567 567 TYR TYR A . n D 4 328 ARG 328 568 568 ARG ARG A . n D 4 329 GLU 329 569 569 GLU GLU A . n D 4 330 PRO 330 570 570 PRO PRO A . n D 4 331 ALA 331 571 571 ALA ALA A . n D 4 332 GLU 332 572 572 GLU GLU A . n D 4 333 ARG 333 573 573 ARG ARG A . n D 4 334 ASP 334 574 574 ASP ASP A . n D 4 335 TRP 335 575 575 TRP ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NA 1 576 207 NA NA1 A . F 5 NA 1 577 1 NA NA1 A . G 5 NA 1 578 6 NA NA1 A . H 6 PPV 1 579 338 PPV PPV A . I 7 HOH 1 88 88 HOH TIP D . I 7 HOH 2 93 93 HOH TIP D . I 7 HOH 3 100 100 HOH TIP D . I 7 HOH 4 112 112 HOH TIP D . I 7 HOH 5 140 140 HOH TIP D . I 7 HOH 6 144 144 HOH TIP D . I 7 HOH 7 145 145 HOH TIP D . I 7 HOH 8 160 160 HOH TIP D . I 7 HOH 9 177 177 HOH TIP D . I 7 HOH 10 260 260 HOH TIP D . J 7 HOH 1 17 17 HOH TIP P . J 7 HOH 2 26 26 HOH TIP P . J 7 HOH 3 29 29 HOH TIP P . J 7 HOH 4 47 47 HOH TIP P . J 7 HOH 5 49 49 HOH TIP P . J 7 HOH 6 50 50 HOH TIP P . J 7 HOH 7 71 71 HOH TIP P . J 7 HOH 8 76 76 HOH TIP P . J 7 HOH 9 85 85 HOH TIP P . J 7 HOH 10 95 95 HOH TIP P . J 7 HOH 11 97 97 HOH TIP P . J 7 HOH 12 110 110 HOH TIP P . J 7 HOH 13 113 113 HOH TIP P . J 7 HOH 14 121 121 HOH TIP P . J 7 HOH 15 124 124 HOH TIP P . J 7 HOH 16 152 152 HOH TIP P . J 7 HOH 17 154 154 HOH TIP P . J 7 HOH 18 157 157 HOH TIP P . J 7 HOH 19 180 180 HOH TIP P . J 7 HOH 20 224 224 HOH TIP P . K 7 HOH 1 13 9 HOH TIP T . K 7 HOH 2 14 19 HOH TIP T . K 7 HOH 3 15 35 HOH TIP T . K 7 HOH 4 16 37 HOH TIP T . K 7 HOH 5 17 38 HOH TIP T . K 7 HOH 6 18 44 HOH TIP T . K 7 HOH 7 19 46 HOH TIP T . K 7 HOH 8 20 74 HOH TIP T . K 7 HOH 9 21 75 HOH TIP T . K 7 HOH 10 22 77 HOH TIP T . K 7 HOH 11 23 80 HOH TIP T . K 7 HOH 12 24 84 HOH TIP T . K 7 HOH 13 25 94 HOH TIP T . K 7 HOH 14 26 101 HOH TIP T . K 7 HOH 15 27 106 HOH TIP T . K 7 HOH 16 28 107 HOH TIP T . K 7 HOH 17 29 109 HOH TIP T . K 7 HOH 18 30 111 HOH TIP T . K 7 HOH 19 31 123 HOH TIP T . K 7 HOH 20 32 130 HOH TIP T . K 7 HOH 21 33 131 HOH TIP T . K 7 HOH 22 34 134 HOH TIP T . K 7 HOH 23 35 155 HOH TIP T . K 7 HOH 24 36 159 HOH TIP T . K 7 HOH 25 37 164 HOH TIP T . K 7 HOH 26 38 166 HOH TIP T . K 7 HOH 27 39 170 HOH TIP T . K 7 HOH 28 40 176 HOH TIP T . K 7 HOH 29 41 185 HOH TIP T . K 7 HOH 30 42 190 HOH TIP T . K 7 HOH 31 43 191 HOH TIP T . K 7 HOH 32 44 247 HOH TIP T . K 7 HOH 33 45 249 HOH TIP T . K 7 HOH 34 46 261 HOH TIP T . K 7 HOH 35 47 262 HOH TIP T . L 7 HOH 1 580 1 HOH TIP A . L 7 HOH 2 581 2 HOH TIP A . L 7 HOH 3 582 3 HOH TIP A . L 7 HOH 4 583 4 HOH TIP A . L 7 HOH 5 584 5 HOH TIP A . L 7 HOH 6 585 7 HOH TIP A . L 7 HOH 7 586 8 HOH TIP A . L 7 HOH 8 587 10 HOH TIP A . L 7 HOH 9 588 11 HOH TIP A . L 7 HOH 10 589 12 HOH TIP A . L 7 HOH 11 590 13 HOH TIP A . L 7 HOH 12 591 14 HOH TIP A . L 7 HOH 13 592 15 HOH TIP A . L 7 HOH 14 593 16 HOH TIP A . L 7 HOH 15 594 18 HOH TIP A . L 7 HOH 16 595 20 HOH TIP A . L 7 HOH 17 596 21 HOH TIP A . L 7 HOH 18 597 22 HOH TIP A . L 7 HOH 19 598 23 HOH TIP A . L 7 HOH 20 599 24 HOH TIP A . L 7 HOH 21 600 25 HOH TIP A . L 7 HOH 22 601 27 HOH TIP A . L 7 HOH 23 602 28 HOH TIP A . L 7 HOH 24 603 30 HOH TIP A . L 7 HOH 25 604 31 HOH TIP A . L 7 HOH 26 605 32 HOH TIP A . L 7 HOH 27 606 33 HOH TIP A . L 7 HOH 28 607 34 HOH TIP A . L 7 HOH 29 608 36 HOH TIP A . L 7 HOH 30 609 39 HOH TIP A . L 7 HOH 31 610 40 HOH TIP A . L 7 HOH 32 611 41 HOH TIP A . L 7 HOH 33 612 42 HOH TIP A . L 7 HOH 34 613 43 HOH TIP A . L 7 HOH 35 614 45 HOH TIP A . L 7 HOH 36 615 48 HOH TIP A . L 7 HOH 37 616 51 HOH TIP A . L 7 HOH 38 617 52 HOH TIP A . L 7 HOH 39 618 53 HOH TIP A . L 7 HOH 40 619 54 HOH TIP A . L 7 HOH 41 620 55 HOH TIP A . L 7 HOH 42 621 56 HOH TIP A . L 7 HOH 43 622 57 HOH TIP A . L 7 HOH 44 623 58 HOH TIP A . L 7 HOH 45 624 59 HOH TIP A . L 7 HOH 46 625 60 HOH TIP A . L 7 HOH 47 626 61 HOH TIP A . L 7 HOH 48 627 62 HOH TIP A . L 7 HOH 49 628 63 HOH TIP A . L 7 HOH 50 629 64 HOH TIP A . L 7 HOH 51 630 65 HOH TIP A . L 7 HOH 52 631 66 HOH TIP A . L 7 HOH 53 632 67 HOH TIP A . L 7 HOH 54 633 68 HOH TIP A . L 7 HOH 55 634 69 HOH TIP A . L 7 HOH 56 635 70 HOH TIP A . L 7 HOH 57 636 73 HOH TIP A . L 7 HOH 58 637 78 HOH TIP A . L 7 HOH 59 638 79 HOH TIP A . L 7 HOH 60 639 81 HOH TIP A . L 7 HOH 61 640 82 HOH TIP A . L 7 HOH 62 641 83 HOH TIP A . L 7 HOH 63 642 86 HOH TIP A . L 7 HOH 64 643 87 HOH TIP A . L 7 HOH 65 644 89 HOH TIP A . L 7 HOH 66 645 90 HOH TIP A . L 7 HOH 67 646 91 HOH TIP A . L 7 HOH 68 647 92 HOH TIP A . L 7 HOH 69 648 96 HOH TIP A . L 7 HOH 70 649 98 HOH TIP A . L 7 HOH 71 650 99 HOH TIP A . L 7 HOH 72 651 102 HOH TIP A . L 7 HOH 73 652 103 HOH TIP A . L 7 HOH 74 653 104 HOH TIP A . L 7 HOH 75 654 105 HOH TIP A . L 7 HOH 76 655 108 HOH TIP A . L 7 HOH 77 656 114 HOH TIP A . L 7 HOH 78 657 115 HOH TIP A . L 7 HOH 79 658 116 HOH TIP A . L 7 HOH 80 659 117 HOH TIP A . L 7 HOH 81 660 120 HOH TIP A . L 7 HOH 82 661 122 HOH TIP A . L 7 HOH 83 662 125 HOH TIP A . L 7 HOH 84 663 126 HOH TIP A . L 7 HOH 85 664 127 HOH TIP A . L 7 HOH 86 665 128 HOH TIP A . L 7 HOH 87 666 129 HOH TIP A . L 7 HOH 88 667 132 HOH TIP A . L 7 HOH 89 668 133 HOH TIP A . L 7 HOH 90 669 135 HOH TIP A . L 7 HOH 91 670 136 HOH TIP A . L 7 HOH 92 671 137 HOH TIP A . L 7 HOH 93 672 138 HOH TIP A . L 7 HOH 94 673 139 HOH TIP A . L 7 HOH 95 674 141 HOH TIP A . L 7 HOH 96 675 142 HOH TIP A . L 7 HOH 97 676 143 HOH TIP A . L 7 HOH 98 677 146 HOH TIP A . L 7 HOH 99 678 147 HOH TIP A . L 7 HOH 100 679 149 HOH TIP A . L 7 HOH 101 680 150 HOH TIP A . L 7 HOH 102 681 151 HOH TIP A . L 7 HOH 103 682 153 HOH TIP A . L 7 HOH 104 683 156 HOH TIP A . L 7 HOH 105 684 158 HOH TIP A . L 7 HOH 106 685 161 HOH TIP A . L 7 HOH 107 686 162 HOH TIP A . L 7 HOH 108 687 163 HOH TIP A . L 7 HOH 109 688 165 HOH TIP A . L 7 HOH 110 689 167 HOH TIP A . L 7 HOH 111 690 168 HOH TIP A . L 7 HOH 112 691 169 HOH TIP A . L 7 HOH 113 692 171 HOH TIP A . L 7 HOH 114 693 172 HOH TIP A . L 7 HOH 115 694 173 HOH TIP A . L 7 HOH 116 695 174 HOH TIP A . L 7 HOH 117 696 175 HOH TIP A . L 7 HOH 118 697 178 HOH TIP A . L 7 HOH 119 698 179 HOH TIP A . L 7 HOH 120 699 181 HOH TIP A . L 7 HOH 121 700 182 HOH TIP A . L 7 HOH 122 701 183 HOH TIP A . L 7 HOH 123 702 184 HOH TIP A . L 7 HOH 124 703 186 HOH TIP A . L 7 HOH 125 704 187 HOH TIP A . L 7 HOH 126 705 188 HOH TIP A . L 7 HOH 127 706 189 HOH TIP A . L 7 HOH 128 707 192 HOH TIP A . L 7 HOH 129 708 193 HOH TIP A . L 7 HOH 130 709 194 HOH TIP A . L 7 HOH 131 710 195 HOH TIP A . L 7 HOH 132 711 196 HOH TIP A . L 7 HOH 133 712 197 HOH TIP A . L 7 HOH 134 713 198 HOH TIP A . L 7 HOH 135 714 201 HOH TIP A . L 7 HOH 136 715 202 HOH TIP A . L 7 HOH 137 716 204 HOH TIP A . L 7 HOH 138 717 205 HOH TIP A . L 7 HOH 139 718 206 HOH TIP A . L 7 HOH 140 719 207 HOH TIP A . L 7 HOH 141 720 208 HOH TIP A . L 7 HOH 142 721 209 HOH TIP A . L 7 HOH 143 722 210 HOH TIP A . L 7 HOH 144 723 211 HOH TIP A . L 7 HOH 145 724 214 HOH TIP A . L 7 HOH 146 725 215 HOH TIP A . L 7 HOH 147 726 216 HOH TIP A . L 7 HOH 148 727 217 HOH TIP A . L 7 HOH 149 728 218 HOH TIP A . L 7 HOH 150 729 219 HOH TIP A . L 7 HOH 151 730 220 HOH TIP A . L 7 HOH 152 731 221 HOH TIP A . L 7 HOH 153 732 225 HOH TIP A . L 7 HOH 154 733 226 HOH TIP A . L 7 HOH 155 734 227 HOH TIP A . L 7 HOH 156 735 228 HOH TIP A . L 7 HOH 157 736 229 HOH TIP A . L 7 HOH 158 737 230 HOH TIP A . L 7 HOH 159 738 231 HOH TIP A . L 7 HOH 160 739 232 HOH TIP A . L 7 HOH 161 740 233 HOH TIP A . L 7 HOH 162 741 234 HOH TIP A . L 7 HOH 163 742 235 HOH TIP A . L 7 HOH 164 743 236 HOH TIP A . L 7 HOH 165 744 237 HOH TIP A . L 7 HOH 166 745 239 HOH TIP A . L 7 HOH 167 746 242 HOH TIP A . L 7 HOH 168 747 243 HOH TIP A . L 7 HOH 169 748 244 HOH TIP A . L 7 HOH 170 749 245 HOH TIP A . L 7 HOH 171 750 248 HOH TIP A . L 7 HOH 172 751 250 HOH TIP A . L 7 HOH 173 752 251 HOH TIP A . L 7 HOH 174 753 252 HOH TIP A . L 7 HOH 175 754 253 HOH TIP A . L 7 HOH 176 755 254 HOH TIP A . L 7 HOH 177 756 256 HOH TIP A . L 7 HOH 178 757 257 HOH TIP A . L 7 HOH 179 758 258 HOH TIP A . L 7 HOH 180 759 259 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DT 5 ? P DT 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? J HOH . ? P HOH 95 ? 1_555 88.6 ? 2 OP1 ? B DT 5 ? P DT 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D SER 99 ? A SER 339 ? 1_555 160.5 ? 3 O ? J HOH . ? P HOH 95 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D SER 99 ? A SER 339 ? 1_555 72.8 ? 4 OP1 ? B DT 5 ? P DT 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ILE 101 ? A ILE 341 ? 1_555 104.2 ? 5 O ? J HOH . ? P HOH 95 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ILE 101 ? A ILE 341 ? 1_555 166.9 ? 6 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ILE 101 ? A ILE 341 ? 1_555 94.2 ? 7 OP1 ? B DT 5 ? P DT 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ALA 104 ? A ALA 344 ? 1_555 95.8 ? 8 O ? J HOH . ? P HOH 95 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ALA 104 ? A ALA 344 ? 1_555 88.7 ? 9 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ALA 104 ? A ALA 344 ? 1_555 89.5 ? 10 O ? D ILE 101 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ALA 104 ? A ALA 344 ? 1_555 92.7 ? 11 OP1 ? B DT 5 ? P DT 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? L HOH . ? A HOH 611 ? 1_555 88.6 ? 12 O ? J HOH . ? P HOH 95 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? L HOH . ? A HOH 611 ? 1_555 83.3 ? 13 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? L HOH . ? A HOH 611 ? 1_555 83.7 ? 14 O ? D ILE 101 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? L HOH . ? A HOH 611 ? 1_555 94.0 ? 15 O ? D ALA 104 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? L HOH . ? A HOH 611 ? 1_555 170.8 ? 16 OP1 ? B DG 7 ? P DG 7 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 78.0 ? 17 OP1 ? B DG 7 ? P DG 7 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 80.0 ? 18 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 87.8 ? 19 OP1 ? B DG 7 ? P DG 7 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O12 ? H PPV . ? A PPV 579 ? 1_555 123.7 ? 20 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O12 ? H PPV . ? A PPV 579 ? 1_555 158.3 ? 21 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O12 ? H PPV . ? A PPV 579 ? 1_555 96.7 ? 22 OP1 ? B DG 7 ? P DG 7 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O22 ? H PPV . ? A PPV 579 ? 1_555 78.7 ? 23 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O22 ? H PPV . ? A PPV 579 ? 1_555 137.5 ? 24 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O22 ? H PPV . ? A PPV 579 ? 1_555 122.2 ? 25 O12 ? H PPV . ? A PPV 579 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O22 ? H PPV . ? A PPV 579 ? 1_555 55.7 ? 26 OP1 ? B DG 7 ? P DG 7 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 601 ? 1_555 93.5 ? 27 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 601 ? 1_555 83.4 ? 28 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 601 ? 1_555 170.0 ? 29 O12 ? H PPV . ? A PPV 579 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 601 ? 1_555 93.2 ? 30 O22 ? H PPV . ? A PPV 579 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 601 ? 1_555 63.1 ? 31 OP1 ? B DG 7 ? P DG 7 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 603 ? 1_555 147.3 ? 32 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 603 ? 1_555 78.2 ? 33 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 603 ? 1_555 76.9 ? 34 O12 ? H PPV . ? A PPV 579 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 603 ? 1_555 82.1 ? 35 O22 ? H PPV . ? A PPV 579 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 603 ? 1_555 133.6 ? 36 O ? L HOH . ? A HOH 601 ? 1_555 NA ? E NA . ? A NA 576 ? 1_555 O ? L HOH . ? A HOH 603 ? 1_555 105.7 ? 37 O ? K HOH . ? T HOH 24 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? K HOH . ? T HOH 41 ? 1_555 110.1 ? 38 O ? K HOH . ? T HOH 24 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? D SER 223 ? A SER 463 ? 1_555 101.3 ? 39 O ? K HOH . ? T HOH 41 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? D SER 223 ? A SER 463 ? 1_555 105.1 ? 40 O ? K HOH . ? T HOH 24 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? A HOH 692 ? 1_555 88.5 ? 41 O ? K HOH . ? T HOH 41 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? A HOH 692 ? 1_555 96.8 ? 42 O ? D SER 223 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? A HOH 692 ? 1_555 151.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-03-07 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 4 'Structure model' '_struct_ref_seq_dif.details' 36 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 STRUCTURE 'data reduction' STUDIO ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.519 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.088 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 251 ? ? -60.14 91.23 2 1 ASN A 253 ? ? -151.61 17.21 3 1 LEU A 254 ? ? -46.66 -16.79 4 1 GLU A 258 ? ? -145.65 -38.32 5 1 PHE A 289 ? ? -71.00 -161.13 6 1 HIS A 290 ? ? -137.42 -47.63 7 1 GLU A 318 ? ? -134.66 -51.01 8 1 ASN A 407 ? ? -166.86 93.75 9 1 CYS A 415 ? ? -114.19 -140.85 10 1 ARG A 438 ? ? -150.54 -27.82 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 250 ? OG1 ? D THR 10 OG1 2 1 Y 1 A THR 250 ? CG2 ? D THR 10 CG2 3 1 Y 1 A ASN 251 ? CG ? D ASN 11 CG 4 1 Y 1 A ASN 251 ? OD1 ? D ASN 11 OD1 5 1 Y 1 A ASN 251 ? ND2 ? D ASN 11 ND2 6 1 Y 1 A HIS 252 ? CG ? D HIS 12 CG 7 1 Y 1 A HIS 252 ? ND1 ? D HIS 12 ND1 8 1 Y 1 A HIS 252 ? CD2 ? D HIS 12 CD2 9 1 Y 1 A HIS 252 ? CE1 ? D HIS 12 CE1 10 1 Y 1 A HIS 252 ? NE2 ? D HIS 12 NE2 11 1 Y 1 A HIS 255 ? CG ? D HIS 15 CG 12 1 Y 1 A HIS 255 ? ND1 ? D HIS 15 ND1 13 1 Y 1 A HIS 255 ? CD2 ? D HIS 15 CD2 14 1 Y 1 A HIS 255 ? CE1 ? D HIS 15 CE1 15 1 Y 1 A HIS 255 ? NE2 ? D HIS 15 NE2 16 1 Y 1 A LYS 265 ? CG ? D LYS 25 CG 17 1 Y 1 A LYS 265 ? CD ? D LYS 25 CD 18 1 Y 1 A LYS 265 ? CE ? D LYS 25 CE 19 1 Y 1 A LYS 265 ? NZ ? D LYS 25 NZ 20 1 Y 1 A LYS 287 ? CG ? D LYS 47 CG 21 1 Y 1 A LYS 287 ? CD ? D LYS 47 CD 22 1 Y 1 A LYS 287 ? CE ? D LYS 47 CE 23 1 Y 1 A LYS 287 ? NZ ? D LYS 47 NZ 24 1 Y 1 A VAL 293 ? CG1 ? D VAL 53 CG1 25 1 Y 1 A VAL 293 ? CG2 ? D VAL 53 CG2 26 1 Y 1 A GLN 297 ? CG ? D GLN 57 CG 27 1 Y 1 A GLN 297 ? CD ? D GLN 57 CD 28 1 Y 1 A GLN 297 ? OE1 ? D GLN 57 OE1 29 1 Y 1 A GLN 297 ? NE2 ? D GLN 57 NE2 30 1 Y 1 A LYS 307 ? CG ? D LYS 67 CG 31 1 Y 1 A LYS 307 ? CD ? D LYS 67 CD 32 1 Y 1 A LYS 307 ? CE ? D LYS 67 CE 33 1 Y 1 A LYS 307 ? NZ ? D LYS 67 NZ 34 1 Y 1 A LEU 317 ? CG ? D LEU 77 CG 35 1 Y 1 A LEU 317 ? CD1 ? D LEU 77 CD1 36 1 Y 1 A LEU 317 ? CD2 ? D LEU 77 CD2 37 1 Y 1 A ARG 323 ? CG ? D ARG 83 CG 38 1 Y 1 A ARG 323 ? CD ? D ARG 83 CD 39 1 Y 1 A ARG 323 ? NE ? D ARG 83 NE 40 1 Y 1 A ARG 323 ? CZ ? D ARG 83 CZ 41 1 Y 1 A ARG 323 ? NH1 ? D ARG 83 NH1 42 1 Y 1 A ARG 323 ? NH2 ? D ARG 83 NH2 43 1 Y 1 A ARG 438 ? CG ? D ARG 198 CG 44 1 Y 1 A ARG 438 ? CD ? D ARG 198 CD 45 1 Y 1 A ARG 438 ? NE ? D ARG 198 NE 46 1 Y 1 A ARG 438 ? CZ ? D ARG 198 CZ 47 1 Y 1 A ARG 438 ? NH1 ? D ARG 198 NH1 48 1 Y 1 A ARG 438 ? NH2 ? D ARG 198 NH2 49 1 Y 1 A ARG 441 ? CG ? D ARG 201 CG 50 1 Y 1 A ARG 441 ? CD ? D ARG 201 CD 51 1 Y 1 A ARG 441 ? NE ? D ARG 201 NE 52 1 Y 1 A ARG 441 ? CZ ? D ARG 201 CZ 53 1 Y 1 A ARG 441 ? NH1 ? D ARG 201 NH1 54 1 Y 1 A ARG 441 ? NH2 ? D ARG 201 NH2 55 1 Y 1 A CYS 543 ? SG ? D CYS 303 SG 56 1 Y 1 A VAL 545 ? CG1 ? D VAL 305 CG1 57 1 Y 1 A VAL 545 ? CG2 ? D VAL 305 CG2 58 1 Y 1 A TRP 575 ? CG ? D TRP 335 CG 59 1 Y 1 A TRP 575 ? CD1 ? D TRP 335 CD1 60 1 Y 1 A TRP 575 ? CD2 ? D TRP 335 CD2 61 1 Y 1 A TRP 575 ? NE1 ? D TRP 335 NE1 62 1 Y 1 A TRP 575 ? CE2 ? D TRP 335 CE2 63 1 Y 1 A TRP 575 ? CE3 ? D TRP 335 CE3 64 1 Y 1 A TRP 575 ? CZ2 ? D TRP 335 CZ2 65 1 Y 1 A TRP 575 ? CZ3 ? D TRP 335 CZ3 66 1 Y 1 A TRP 575 ? CH2 ? D TRP 335 CH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 241 ? D MET 1 2 1 Y 1 A ALA 242 ? D ALA 2 3 1 Y 1 A GLN 243 ? D GLN 3 4 1 Y 1 A PRO 244 ? D PRO 4 5 1 Y 1 A SER 245 ? D SER 5 6 1 Y 1 A SER 246 ? D SER 6 7 1 Y 1 A GLN 247 ? D GLN 7 8 1 Y 1 A LYS 248 ? D LYS 8 9 1 Y 1 A ALA 249 ? D ALA 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 NA NA NA N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PPV O11 O N N 417 PPV P1 P N N 418 PPV O21 O N N 419 PPV O31 O N N 420 PPV OPP O N N 421 PPV P2 P N N 422 PPV O12 O N N 423 PPV O22 O N N 424 PPV O32 O N N 425 PPV H11 H N N 426 PPV H21 H N N 427 PPV H12 H N N 428 PPV H32 H N N 429 PRO N N N N 430 PRO CA C N S 431 PRO C C N N 432 PRO O O N N 433 PRO CB C N N 434 PRO CG C N N 435 PRO CD C N N 436 PRO OXT O N N 437 PRO H H N N 438 PRO HA H N N 439 PRO HB2 H N N 440 PRO HB3 H N N 441 PRO HG2 H N N 442 PRO HG3 H N N 443 PRO HD2 H N N 444 PRO HD3 H N N 445 PRO HXT H N N 446 SER N N N N 447 SER CA C N S 448 SER C C N N 449 SER O O N N 450 SER CB C N N 451 SER OG O N N 452 SER OXT O N N 453 SER H H N N 454 SER H2 H N N 455 SER HA H N N 456 SER HB2 H N N 457 SER HB3 H N N 458 SER HG H N N 459 SER HXT H N N 460 THR N N N N 461 THR CA C N S 462 THR C C N N 463 THR O O N N 464 THR CB C N R 465 THR OG1 O N N 466 THR CG2 C N N 467 THR OXT O N N 468 THR H H N N 469 THR H2 H N N 470 THR HA H N N 471 THR HB H N N 472 THR HG1 H N N 473 THR HG21 H N N 474 THR HG22 H N N 475 THR HG23 H N N 476 THR HXT H N N 477 TRP N N N N 478 TRP CA C N S 479 TRP C C N N 480 TRP O O N N 481 TRP CB C N N 482 TRP CG C Y N 483 TRP CD1 C Y N 484 TRP CD2 C Y N 485 TRP NE1 N Y N 486 TRP CE2 C Y N 487 TRP CE3 C Y N 488 TRP CZ2 C Y N 489 TRP CZ3 C Y N 490 TRP CH2 C Y N 491 TRP OXT O N N 492 TRP H H N N 493 TRP H2 H N N 494 TRP HA H N N 495 TRP HB2 H N N 496 TRP HB3 H N N 497 TRP HD1 H N N 498 TRP HE1 H N N 499 TRP HE3 H N N 500 TRP HZ2 H N N 501 TRP HZ3 H N N 502 TRP HH2 H N N 503 TRP HXT H N N 504 TYR N N N N 505 TYR CA C N S 506 TYR C C N N 507 TYR O O N N 508 TYR CB C N N 509 TYR CG C Y N 510 TYR CD1 C Y N 511 TYR CD2 C Y N 512 TYR CE1 C Y N 513 TYR CE2 C Y N 514 TYR CZ C Y N 515 TYR OH O N N 516 TYR OXT O N N 517 TYR H H N N 518 TYR H2 H N N 519 TYR HA H N N 520 TYR HB2 H N N 521 TYR HB3 H N N 522 TYR HD1 H N N 523 TYR HD2 H N N 524 TYR HE1 H N N 525 TYR HE2 H N N 526 TYR HH H N N 527 TYR HXT H N N 528 VAL N N N N 529 VAL CA C N S 530 VAL C C N N 531 VAL O O N N 532 VAL CB C N N 533 VAL CG1 C N N 534 VAL CG2 C N N 535 VAL OXT O N N 536 VAL H H N N 537 VAL H2 H N N 538 VAL HA H N N 539 VAL HB H N N 540 VAL HG11 H N N 541 VAL HG12 H N N 542 VAL HG13 H N N 543 VAL HG21 H N N 544 VAL HG22 H N N 545 VAL HG23 H N N 546 VAL HXT H N N 547 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PPV O11 P1 sing N N 409 PPV O11 H11 sing N N 410 PPV P1 O21 sing N N 411 PPV P1 O31 doub N N 412 PPV P1 OPP sing N N 413 PPV O21 H21 sing N N 414 PPV OPP P2 sing N N 415 PPV P2 O12 sing N N 416 PPV P2 O22 doub N N 417 PPV P2 O32 sing N N 418 PPV O12 H12 sing N N 419 PPV O32 H32 sing N N 420 PRO N CA sing N N 421 PRO N CD sing N N 422 PRO N H sing N N 423 PRO CA C sing N N 424 PRO CA CB sing N N 425 PRO CA HA sing N N 426 PRO C O doub N N 427 PRO C OXT sing N N 428 PRO CB CG sing N N 429 PRO CB HB2 sing N N 430 PRO CB HB3 sing N N 431 PRO CG CD sing N N 432 PRO CG HG2 sing N N 433 PRO CG HG3 sing N N 434 PRO CD HD2 sing N N 435 PRO CD HD3 sing N N 436 PRO OXT HXT sing N N 437 SER N CA sing N N 438 SER N H sing N N 439 SER N H2 sing N N 440 SER CA C sing N N 441 SER CA CB sing N N 442 SER CA HA sing N N 443 SER C O doub N N 444 SER C OXT sing N N 445 SER CB OG sing N N 446 SER CB HB2 sing N N 447 SER CB HB3 sing N N 448 SER OG HG sing N N 449 SER OXT HXT sing N N 450 THR N CA sing N N 451 THR N H sing N N 452 THR N H2 sing N N 453 THR CA C sing N N 454 THR CA CB sing N N 455 THR CA HA sing N N 456 THR C O doub N N 457 THR C OXT sing N N 458 THR CB OG1 sing N N 459 THR CB CG2 sing N N 460 THR CB HB sing N N 461 THR OG1 HG1 sing N N 462 THR CG2 HG21 sing N N 463 THR CG2 HG22 sing N N 464 THR CG2 HG23 sing N N 465 THR OXT HXT sing N N 466 TRP N CA sing N N 467 TRP N H sing N N 468 TRP N H2 sing N N 469 TRP CA C sing N N 470 TRP CA CB sing N N 471 TRP CA HA sing N N 472 TRP C O doub N N 473 TRP C OXT sing N N 474 TRP CB CG sing N N 475 TRP CB HB2 sing N N 476 TRP CB HB3 sing N N 477 TRP CG CD1 doub Y N 478 TRP CG CD2 sing Y N 479 TRP CD1 NE1 sing Y N 480 TRP CD1 HD1 sing N N 481 TRP CD2 CE2 doub Y N 482 TRP CD2 CE3 sing Y N 483 TRP NE1 CE2 sing Y N 484 TRP NE1 HE1 sing N N 485 TRP CE2 CZ2 sing Y N 486 TRP CE3 CZ3 doub Y N 487 TRP CE3 HE3 sing N N 488 TRP CZ2 CH2 doub Y N 489 TRP CZ2 HZ2 sing N N 490 TRP CZ3 CH2 sing Y N 491 TRP CZ3 HZ3 sing N N 492 TRP CH2 HH2 sing N N 493 TRP OXT HXT sing N N 494 TYR N CA sing N N 495 TYR N H sing N N 496 TYR N H2 sing N N 497 TYR CA C sing N N 498 TYR CA CB sing N N 499 TYR CA HA sing N N 500 TYR C O doub N N 501 TYR C OXT sing N N 502 TYR CB CG sing N N 503 TYR CB HB2 sing N N 504 TYR CB HB3 sing N N 505 TYR CG CD1 doub Y N 506 TYR CG CD2 sing Y N 507 TYR CD1 CE1 sing Y N 508 TYR CD1 HD1 sing N N 509 TYR CD2 CE2 doub Y N 510 TYR CD2 HD2 sing N N 511 TYR CE1 CZ doub Y N 512 TYR CE1 HE1 sing N N 513 TYR CE2 CZ sing Y N 514 TYR CE2 HE2 sing N N 515 TYR CZ OH sing N N 516 TYR OH HH sing N N 517 TYR OXT HXT sing N N 518 VAL N CA sing N N 519 VAL N H sing N N 520 VAL N H2 sing N N 521 VAL CA C sing N N 522 VAL CA CB sing N N 523 VAL CA HA sing N N 524 VAL C O doub N N 525 VAL C OXT sing N N 526 VAL CB CG1 sing N N 527 VAL CB CG2 sing N N 528 VAL CB HB sing N N 529 VAL CG1 HG11 sing N N 530 VAL CG1 HG12 sing N N 531 VAL CG1 HG13 sing N N 532 VAL CG2 HG21 sing N N 533 VAL CG2 HG22 sing N N 534 VAL CG2 HG23 sing N N 535 VAL OXT HXT sing N N 536 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2BCU 'double helix' 2BCU 'b-form double helix' 2BCU 'bulge loop' 2BCU 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 C DC 4 1_555 -0.551 0.022 0.016 -17.047 -9.217 -1.238 1 D_DG1:DC4_T D 1 ? T 4 ? 19 1 1 A DC 2 1_555 C DG 3 1_555 -0.035 -0.037 0.086 -10.248 2.671 0.705 2 D_DC2:DG3_T D 2 ? T 3 ? 19 1 1 A DC 3 1_555 C DG 2 1_555 0.439 -0.090 -0.123 1.974 -0.549 2.789 3 D_DC3:DG2_T D 3 ? T 2 ? 19 1 1 A DG 4 1_555 C DC 1 1_555 -0.067 -0.230 0.288 12.687 -2.960 -5.799 4 D_DG4:DC1_T D 4 ? T 1 ? 19 1 1 B DC 1 1_555 C DG 12 1_555 -0.064 -0.244 0.447 -21.394 -17.380 0.319 5 P_DC1:DG12_T P 1 ? T 12 ? 19 1 1 B DA 2 1_555 C DT 11 1_555 0.205 -0.076 -0.005 -7.845 -8.402 0.794 6 P_DA2:DT11_T P 2 ? T 11 ? 20 1 1 B DG 3 1_555 C DC 10 1_555 -0.129 -0.224 -0.091 -5.407 -13.120 -2.332 7 P_DG3:DC10_T P 3 ? T 10 ? 19 1 1 B DT 4 1_555 C DA 9 1_555 -0.072 -0.011 -0.036 -5.741 -7.424 0.671 8 P_DT4:DA9_T P 4 ? T 9 ? 20 1 1 B DT 5 1_555 C DT 8 1_555 1.214 -1.913 -0.256 6.126 -19.289 1.435 9 P_DT5:DT8_T P 5 ? T 8 ? 16 1 1 B DC 6 1_555 C DG 6 1_555 0.142 -0.127 0.306 -7.111 -4.545 -2.580 10 P_DC6:DG6_T P 6 ? T 6 ? 19 1 1 B DG 7 1_555 C DC 5 1_555 -0.164 -0.161 0.504 14.414 7.333 1.422 11 P_DG7:DC5_T P 7 ? T 5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 C DC 4 1_555 A DC 2 1_555 C DG 3 1_555 -0.470 -0.985 3.223 1.530 7.629 35.486 -2.597 0.958 2.934 12.334 -2.474 36.302 1 DD_DG1DC2:DG3DC4_TT D 1 ? T 4 ? D 2 ? T 3 ? 1 A DC 2 1_555 C DG 3 1_555 A DC 3 1_555 C DG 2 1_555 0.718 0.095 3.038 4.416 0.326 38.037 0.107 -0.573 3.100 0.498 -6.748 38.284 2 DD_DC2DC3:DG2DG3_TT D 2 ? T 3 ? D 3 ? T 2 ? 1 A DC 3 1_555 C DG 2 1_555 A DG 4 1_555 C DC 1 1_555 -1.221 0.017 3.103 -4.250 5.449 25.105 -1.427 1.569 3.195 12.241 9.548 26.024 3 DD_DC3DG4:DC1DG2_TT D 3 ? T 2 ? D 4 ? T 1 ? 1 B DC 1 1_555 C DG 12 1_555 B DA 2 1_555 C DT 11 1_555 -0.376 0.762 3.109 2.538 13.544 34.162 -0.627 0.940 3.143 21.979 -4.118 36.760 4 PP_DC1DA2:DT11DG12_TT P 1 ? T 12 ? P 2 ? T 11 ? 1 B DA 2 1_555 C DT 11 1_555 B DG 3 1_555 C DC 10 1_555 0.107 -0.563 3.296 -0.805 4.749 30.357 -1.988 -0.359 3.170 8.997 1.525 30.728 5 PP_DA2DG3:DC10DT11_TT P 2 ? T 11 ? P 3 ? T 10 ? 1 B DG 3 1_555 C DC 10 1_555 B DT 4 1_555 C DA 9 1_555 0.513 -0.646 3.319 1.425 6.582 28.590 -2.687 -0.707 3.117 13.099 -2.836 29.356 6 PP_DG3DT4:DA9DC10_TT P 3 ? T 10 ? P 4 ? T 9 ? 1 B DT 4 1_555 C DA 9 1_555 B DT 5 1_555 C DT 8 1_555 0.499 0.814 3.144 -1.547 0.585 46.288 0.987 -0.760 3.136 0.744 1.967 46.316 7 PP_DT4DT5:DT8DA9_TT P 4 ? T 9 ? P 5 ? T 8 ? 1 B DT 5 1_555 C DT 8 1_555 B DC 6 1_555 C DG 6 1_555 -1.159 -1.435 3.781 -1.392 10.085 24.797 -5.930 2.112 3.033 22.320 3.081 26.775 8 PP_DT5DC6:DG6DT8_TT P 5 ? T 8 ? P 6 ? T 6 ? 1 B DC 6 1_555 C DG 6 1_555 B DG 7 1_555 C DC 5 1_555 0.197 0.056 2.815 -0.782 10.989 22.999 -2.601 -0.640 2.564 25.749 1.832 25.470 9 PP_DC6DG7:DC5DG6_TT P 6 ? T 6 ? P 7 ? T 5 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'SODIUM ION' NA 6 PYROPHOSPHATE PPV 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1RZT _pdbx_initial_refinement_model.details 'pdb entry 1RZT' #