HEADER VIRUS PROTEIN 02-DEC-04 2BF1 TITLE STRUCTURE OF AN UNLIGANDED AND FULLY-GLYCOSYLATED SIV GP120 ENVELOPE TITLE 2 GLYCOPROTEIN CAVEAT 2BF1 NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 FUC B 4 HAS WRONG CAVEAT 2 2BF1 CHIRALITY AT ATOM C1 FUC C 6 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 2BF1 NAG D 1 HAS WRONG CHIRALITY AT ATOM C1 FUC D 3 HAS WRONG CAVEAT 4 2BF1 CHIRALITY AT ATOM C1 NAG E 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 5 2BF1 FUC E 3 HAS WRONG CHIRALITY AT ATOM C1 FUC F 4 HAS WRONG CAVEAT 6 2BF1 CHIRALITY AT ATOM C1 NAG G 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 7 2BF1 NAG H 1 HAS WRONG CHIRALITY AT ATOM C1 FUC H 4 HAS WRONG CAVEAT 8 2BF1 CHIRALITY AT ATOM C1 NAG I 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 9 2BF1 NAG K 1 HAS WRONG CHIRALITY AT ATOM C1 FUC K 6 HAS WRONG CAVEAT 10 2BF1 CHIRALITY AT ATOM C1 NAG L 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTERIOR MEMBRANE GLYCOPROTEIN GP120; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GP120 CORE, RESIDUES 66-109,209-311,342-502; COMPND 5 SYNONYM: SIV GP120; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN IMMUNODEFICIENCY VIRUS; SOURCE 3 ORGANISM_COMMON: SIV; SOURCE 4 ORGANISM_TAXID: 11723; SOURCE 5 STRAIN: MAC32H; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PFAST-BAC1; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSIVGP120CORE KEYWDS VIRUS PROTEIN, SIV, GP120, ENVELOPE GLYCOPROTEIN, AIDS, COAT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.CHEN,E.M.VOGAN,H.GONG,J.J.SKEHEL,D.C.WILEY,S.C.HARRISON REVDAT 7 16-OCT-24 2BF1 1 HETSYN LINK REVDAT 6 29-JUL-20 2BF1 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 08-MAY-19 2BF1 1 REMARK REVDAT 4 03-APR-19 2BF1 1 SOURCE LINK REVDAT 3 29-AUG-18 2BF1 1 CAVEAT COMPND HET HETNAM REVDAT 3 2 1 FORMUL LINK SITE ATOM REVDAT 2 24-FEB-09 2BF1 1 VERSN REVDAT 1 17-FEB-05 2BF1 0 JRNL AUTH B.CHEN,E.M.VOGAN,H.GONG,J.J.SKEHEL,D.C.WILEY,S.C.HARRISON JRNL TITL STRUCTURE OF AN UNLIGANDED SIMIAN IMMUNODEFICIENCY VIRUS JRNL TITL 2 GP120 CORE JRNL REF NATURE V. 433 834 2005 JRNL REFN ISSN 0028-0836 JRNL PMID 15729334 JRNL DOI 10.1038/NATURE03327 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.CHEN,E.M.VOGAN,H.GONG,J.J.SKEHEL,D.C.WILEY,S.C.HARRISON REMARK 1 TITL DETERMINING THE STRUCTURE OF THE UNLIGANDED AND REMARK 1 TITL 2 FULLY-GLYCOSYLATED SIV GP120 ENVELOPE GLYCOPROTEIN. REMARK 1 REF STRUCTURE V. 13 197 2005 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 15698564 REMARK 1 DOI 10.1016/J.STR.2004.12.004 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0003 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOODWITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 5842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.385 REMARK 3 R VALUE (WORKING SET) : 0.385 REMARK 3 FREE R VALUE : 0.388 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 279 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1309 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4030 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.5330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2470 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 615 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 141.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 128.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 1.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 1.697 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 269.262 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.809 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.857 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3207 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4433 ; 2.067 ; 2.150 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 302 ; 8.116 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;45.267 ;23.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;24.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;18.610 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 604 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2043 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1715 ; 0.341 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2100 ; 0.344 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 112 ; 0.268 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 82 ; 0.368 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.194 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 499 REMARK 3 RESIDUE RANGE : A 1500 A 1549 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8277 24.3101 7.6839 REMARK 3 T TENSOR REMARK 3 T11: 0.3099 T22: 0.3770 REMARK 3 T33: -0.1065 T12: 0.1841 REMARK 3 T13: 0.1642 T23: -0.1204 REMARK 3 L TENSOR REMARK 3 L11: 2.5980 L22: 4.3451 REMARK 3 L33: 3.9816 L12: 0.6658 REMARK 3 L13: -0.2382 L23: 1.2659 REMARK 3 S TENSOR REMARK 3 S11: 0.0795 S12: 0.2841 S13: 0.0143 REMARK 3 S21: -0.5748 S22: -0.0061 S23: 0.2420 REMARK 3 S31: 0.0411 S32: -0.1310 S33: -0.0735 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 3.00 REMARK 3 ION PROBE RADIUS : 3.00 REMARK 3 SHRINKAGE RADIUS : 2.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. PLEASE NOTE THAT BECAUSE OF THE LOW RESOLUTION OF THE REMARK 3 EXPERIMENTAL DATA USED TO DETERMINE THIS STRUCTURE, THE REMARK 3 PRECISION OF THE MODEL, PARTICULARLY WITH RESPECT TO SIDE CHAIN REMARK 3 POSITIONS, IS REDUCED. REMARK 4 REMARK 4 2BF1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1290021845. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.916 REMARK 200 MONOCHROMATOR : BENT TRIANGULAR ASYMMETRIC CUT REMARK 200 SI(111) MONOCHROMATER REMARK 200 OPTICS : RH-COATED SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100402 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 26.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.82000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SOLVE, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 15% PEG REMARK 280 6000, 100 MM SODIUM CITRATE, PH 5.0 AND 8% PEG 400 AT 20 DEGREES REMARK 280 C., PH 5.00, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.85050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.02400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.02400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.27575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.02400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.02400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.42525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.02400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.02400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 88.27575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.02400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.02400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.42525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.85050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ALTHOUGH THIS ENTRY DESCRIBES THE MONOMERIC REMARK 300 STRUCTURE OFGP120, A THEORETICAL MODEL OF THE REMARK 300 TRIMERIC FORM OF THEPROTEIN HAS BEEN GENERATED. REMARK 300 THE DETAILS OF THE TRIMER ANDTHE MATRICES RELATING REMARK 300 CHAIN A OF THIS ENTRY TO THECONSTITUENTS OF REMARK 300 THE TRIMERIC STRUCTURE CAN BE FOUND INREMARK 400 REMARK 300 BELOW. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 GP120 IS PRODUCED FROM A PRECURSOR PROTEIN, GP160. THE REMARK 400 PRECURSOR ASSEMBLES INTO A TRIMER, WHICH REMAINS INTACT REMARK 400 AFTER CLEAVAGE OF GP160 TO GP120 AND GP41. A THEORETICAL REMARK 400 MODEL OF THE POSITION AND ORIENTATION OF GP120 WITHIN THIS REMARK 400 TRIMERIC ASSEMBLY HAS BEEN GENERATED. THE MODEL LACKS THE REMARK 400 GP41 STRUCTURE, BUT SPACE HAS BEEN LEFT FOR GP41 AT THE REMARK 400 BASE OF THE TRIMER, RESULTING IN GAPS BETWEEN THE GP120 REMARK 400 CHAINS OF THE MODEL. REMARK 400 REMARK 400 THE TRIMER MODEL CAN BE GENERATED BY APPLYING THE FOLLOWING REMARK 400 TRANSFORMATIONS TO THE COORDINATES OF CHAIN A OF THIS PDB REMARK 400 ENTRY: REMARK 400 REMARK 400 TRANS1 1 -0.932060 0.211070 0.294480 1.43530 REMARK 400 TRANS2 1 0.071796 -0.689070 0.721130 43.48100 REMARK 400 TRANS3 1 0.355130 0.693270 0.627100 -12.91480 REMARK 400 TRANS1 2 0.528220 -0.702280 0.477270 36.93710 REMARK 400 TRANS2 2 0.771290 0.161790 -0.615570 -22.98340 REMARK 400 TRANS3 2 0.355090 0.693270 0.627130 -12.91500 REMARK 400 TRANS1 3 0.403860 0.491250 -0.771730 -38.37270 REMARK 400 TRANS2 3 -0.843070 0.527350 -0.105510 -20.49850 REMARK 400 TRANS3 3 0.355140 0.693230 0.627140 -12.91380 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 220 REMARK 465 LYS A 221 REMARK 465 HIS A 222 REMARK 465 TYR A 223 REMARK 465 TRP A 224 REMARK 465 ASP A 225 REMARK 465 THR A 226 REMARK 465 ILE A 227 REMARK 465 ARG A 228 REMARK 465 GLU A 500 REMARK 465 ILE A 501 REMARK 465 THR A 502 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 354 N GLN A 358 1.91 REMARK 500 N ILE A 437 O ASN A 446 2.05 REMARK 500 O GLU A 355 N THR A 359 2.09 REMARK 500 O ASP A 244 O6 NAG K 1 2.13 REMARK 500 O TRP A 91 OH TYR A 448 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O3 FUC B 4 O3 FUC B 4 8555 0.65 REMARK 500 C3 FUC B 4 O3 FUC B 4 8555 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 244 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 495 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 67 -156.83 -59.31 REMARK 500 LEU A 69 83.55 -151.59 REMARK 500 SER A 74 -142.78 -142.37 REMARK 500 ASN A 80 150.36 -46.76 REMARK 500 THR A 81 -93.21 -112.62 REMARK 500 THR A 83 -80.46 -48.63 REMARK 500 SER A 97 -11.10 -161.98 REMARK 500 PRO A 100 -65.99 -105.26 REMARK 500 CYS A 101 -50.69 -161.56 REMARK 500 PRO A 106 -146.70 -86.18 REMARK 500 LEU A 107 54.66 165.29 REMARK 500 ILE A 109 0.44 -158.72 REMARK 500 HIS A 209 -163.98 -162.91 REMARK 500 GLU A 217 -142.61 174.39 REMARK 500 SER A 218 -155.44 -97.76 REMARK 500 CYS A 232 -79.12 -66.53 REMARK 500 ALA A 233 -46.46 -174.44 REMARK 500 PRO A 235 72.65 -62.25 REMARK 500 CYS A 242 -112.95 -65.48 REMARK 500 ASN A 243 164.06 161.40 REMARK 500 ASP A 244 -86.29 141.76 REMARK 500 SER A 248 -67.94 -153.72 REMARK 500 MET A 251 75.41 77.19 REMARK 500 SER A 255 -93.99 -135.23 REMARK 500 SER A 261 -64.20 -144.02 REMARK 500 CYS A 262 154.82 -41.61 REMARK 500 THR A 263 79.74 -151.41 REMARK 500 MET A 265 -56.98 -18.50 REMARK 500 THR A 268 -141.80 -76.04 REMARK 500 SER A 271 148.71 -172.16 REMARK 500 TRP A 273 -72.36 -109.09 REMARK 500 PHE A 276 -99.24 -77.28 REMARK 500 THR A 279 132.16 74.99 REMARK 500 ARG A 280 59.27 23.99 REMARK 500 ASN A 283 -70.43 -30.54 REMARK 500 THR A 285 154.43 -40.10 REMARK 500 TYR A 288 115.18 -20.28 REMARK 500 ARG A 292 50.47 -157.55 REMARK 500 ASP A 293 -43.95 54.53 REMARK 500 ASN A 294 -53.74 -140.59 REMARK 500 TYR A 304 161.39 -32.58 REMARK 500 ASN A 348 41.20 -97.16 REMARK 500 PRO A 364 87.22 -64.32 REMARK 500 LYS A 374 70.67 -164.91 REMARK 500 THR A 378 -95.36 -156.59 REMARK 500 ALA A 379 29.55 99.26 REMARK 500 PRO A 380 -117.98 -82.91 REMARK 500 ARG A 381 104.88 138.16 REMARK 500 PRO A 385 -130.63 -93.41 REMARK 500 GLU A 386 43.64 164.48 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 IN THE EXPRESSION CONSTRUCT, SHORT LINKERS, GAG HAVE REMARK 999 BEEN SUBSTITUTED FOR THE V1V2 AND V3 LOOPS. THAT IS, REMARK 999 RESIDUES FROM 110 TO 208 WERE REPLACED BY 3 RESIDUES REMARK 999 GAG. RESIDUES FROM 312 TO 341 WERE REPLACED BY THREE REMARK 999 RESIDUES GAG. RESIDUES FROM 220 - 228 AND 500 - 502 REMARK 999 ARE DISORDERED AND NOT SEEN IN THE ELECTRON DENSITY REMARK 999 MAPS. DBREF 2BF1 A 64 65 PDB 2BF1 2BF1 64 65 DBREF 2BF1 A 66 109 UNP Q07374 Q07374 66 109 DBREF 2BF1 A 110 110 PDB 2BF1 2BF1 110 110 DBREF 2BF1 A 207 208 PDB 2BF1 2BF1 207 208 DBREF 2BF1 A 209 311 UNP Q07374 Q07374 209 311 DBREF 2BF1 A 312 313 PDB 2BF1 2BF1 312 313 DBREF 2BF1 A 341 341 PDB 2BF1 2BF1 341 341 DBREF 2BF1 A 342 502 UNP Q07374 Q07374 342 502 SEQRES 1 A 316 HIS MET GLU LEU ALA LEU ASN VAL THR GLU SER PHE ASP SEQRES 2 A 316 ALA TRP GLU ASN THR VAL THR GLU GLN ALA ILE GLU ASP SEQRES 3 A 316 VAL TRP GLN LEU PHE GLU THR SER ILE LYS PRO CYS VAL SEQRES 4 A 316 LYS LEU SER PRO LEU CYS ILE GLY ALA GLY HIS CYS ASN SEQRES 5 A 316 THR SER ILE ILE GLN GLU SER CYS ASP LYS HIS TYR TRP SEQRES 6 A 316 ASP THR ILE ARG PHE ARG TYR CYS ALA PRO PRO GLY TYR SEQRES 7 A 316 ALA LEU LEU ARG CYS ASN ASP THR ASN TYR SER GLY PHE SEQRES 8 A 316 MET PRO LYS CYS SER LYS VAL VAL VAL SER SER CYS THR SEQRES 9 A 316 ARG MET MET GLU THR GLN THR SER THR TRP PHE GLY PHE SEQRES 10 A 316 ASN GLY THR ARG ALA GLU ASN ARG THR TYR ILE TYR TRP SEQRES 11 A 316 HIS GLY ARG ASP ASN ARG THR ILE ILE SER LEU ASN LYS SEQRES 12 A 316 TYR TYR ASN LEU THR MET LYS CYS ARG GLY ALA GLY TRP SEQRES 13 A 316 CYS TRP PHE GLY GLY ASN TRP LYS ASP ALA ILE LYS GLU SEQRES 14 A 316 MET LYS GLN THR ILE VAL LYS HIS PRO ARG TYR THR GLY SEQRES 15 A 316 THR ASN ASN THR ASP LYS ILE ASN LEU THR ALA PRO ARG SEQRES 16 A 316 GLY GLY ASP PRO GLU VAL THR PHE MET TRP THR ASN CYS SEQRES 17 A 316 ARG GLY GLU PHE LEU TYR CYS LYS MET ASN TRP PHE LEU SEQRES 18 A 316 ASN TRP VAL GLU ASP ARG ASP VAL THR ASN GLN ARG PRO SEQRES 19 A 316 LYS GLU ARG HIS ARG ARG ASN TYR VAL PRO CYS HIS ILE SEQRES 20 A 316 ARG GLN ILE ILE ASN THR TRP HIS LYS VAL GLY LYS ASN SEQRES 21 A 316 VAL TYR LEU PRO PRO ARG GLU GLY ASP LEU THR CYS ASN SEQRES 22 A 316 SER THR VAL THR SER LEU ILE ALA ASN ILE ASP TRP THR SEQRES 23 A 316 ASP GLY ASN GLN THR ASN ILE THR MET SER ALA GLU VAL SEQRES 24 A 316 ALA GLU LEU TYR ARG LEU GLU LEU GLY ASP TYR LYS LEU SEQRES 25 A 316 VAL GLU ILE THR MODRES 2BF1 ASN A 70 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 211 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 243 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 246 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 277 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 283 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 294 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 305 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 370 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 376 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 459 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 475 ASN GLYCOSYLATION SITE MODRES 2BF1 ASN A 478 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET FUC C 6 10 HET NAG D 1 14 HET NAG D 2 14 HET FUC D 3 10 HET NAG E 1 14 HET NAG E 2 14 HET FUC E 3 10 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET FUC F 4 10 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET FUC H 4 10 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET MAN I 4 11 HET MAN I 5 11 HET MAN I 6 11 HET MAN I 7 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET MAN J 4 11 HET MAN J 5 11 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET MAN K 4 11 HET MAN K 5 11 HET FUC K 6 10 HET NAG L 1 14 HET NAG L 2 14 HET BMA L 3 11 HET MAN L 4 11 HET NAG A1500 14 HET NAG A1501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 24(C8 H15 N O6) FORMUL 2 BMA 8(C6 H12 O6) FORMUL 2 FUC 7(C6 H12 O5) FORMUL 3 MAN 11(C6 H12 O6) HELIX 1 1 ASN A 80 GLU A 95 1 16 HELIX 2 2 MET A 265 THR A 268 1 4 HELIX 3 3 ASN A 348 HIS A 363 1 16 HELIX 4 4 ASN A 404 LEU A 407 1 4 HELIX 5 5 VAL A 485 LEU A 493 1 9 SHEET 1 AA 2 VAL A 102 LEU A 107 0 SHEET 2 AA 2 ASN A 211 GLN A 216 -1 O ILE A 215 N LYS A 103 SHEET 1 AB 3 LYS A 256 SER A 261 0 SHEET 2 AB 3 ALA A 238 CYS A 242 -1 N LEU A 239 O SER A 260 SHEET 3 AB 3 LYS A 497 VAL A 499 -1 O LYS A 497 N LEU A 240 SHEET 1 AC 7 GLN A 269 THR A 272 0 SHEET 2 AC 7 THR A 388 CYS A 394 -1 O ASN A 393 N THR A 270 SHEET 3 AC 7 PHE A 398 LYS A 402 -1 O LEU A 399 N THR A 392 SHEET 4 AC 7 TYR A 428 ILE A 433 -1 N HIS A 432 O TYR A 400 SHEET 5 AC 7 GLY A 341 GLY A 347 -1 O GLY A 341 N CYS A 431 SHEET 6 AC 7 ASN A 305 ARG A 311 -1 N THR A 307 O GLY A 346 SHEET 7 AC 7 THR A 457 VAL A 462 -1 N CYS A 458 O CYS A 310 SHEET 1 AD 6 THR A 285 TRP A 289 0 SHEET 2 AD 6 ILE A 297 LYS A 302 -1 O ASN A 301 N TYR A 286 SHEET 3 AD 6 THR A 463 TRP A 471 -1 O ALA A 467 N ILE A 298 SHEET 4 AD 6 GLN A 476 MET A 481 -1 O ASN A 478 N ASP A 470 SHEET 5 AD 6 ASP A 373 ASN A 376 1 O ASN A 376 N ILE A 479 SHEET 6 AD 6 VAL A 410 ARG A 413 -1 N GLU A 411 O ILE A 375 SHEET 1 AE 2 ILE A 436 TRP A 440 0 SHEET 2 AE 2 GLY A 444 TYR A 448 -1 O ASN A 446 N ILE A 437 SSBOND 1 CYS A 101 CYS A 219 1555 1555 2.02 SSBOND 2 CYS A 108 CYS A 210 1555 1555 2.03 SSBOND 3 CYS A 232 CYS A 262 1555 1555 2.04 SSBOND 4 CYS A 242 CYS A 254 1555 1555 2.02 SSBOND 5 CYS A 310 CYS A 343 1555 1555 2.05 SSBOND 6 CYS A 394 CYS A 458 1555 1555 2.04 SSBOND 7 CYS A 401 CYS A 431 1555 1555 2.04 LINK ND2 ASN A 70 C1 NAG A1500 1555 1555 1.45 LINK ND2 ASN A 211 C1 NAG A1501 1555 1555 1.46 LINK ND2 ASN A 243 C1 NAG K 1 1555 1555 1.46 LINK ND2 ASN A 246 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 277 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 283 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN A 294 C1 NAG E 1 1555 1555 1.46 LINK ND2 ASN A 305 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN A 370 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN A 376 C1 NAG H 1 1555 1555 1.46 LINK ND2 ASN A 459 C1 NAG I 1 1555 1555 1.46 LINK ND2 ASN A 475 C1 NAG J 1 1555 1555 1.46 LINK ND2 ASN A 478 C1 NAG L 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.42 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.46 LINK O6 NAG C 1 C1 FUC C 6 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.46 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.46 LINK O6 NAG D 1 C1 FUC D 3 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O6 NAG E 1 C1 FUC E 3 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.43 LINK O6 NAG F 1 C1 FUC F 4 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.43 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O6 NAG H 1 C1 FUC H 4 1555 1555 1.44 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.47 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.45 LINK O3 BMA I 3 C1 MAN I 4 1555 1555 1.46 LINK O6 BMA I 3 C1 MAN I 7 1555 1555 1.45 LINK O2 MAN I 4 C1 MAN I 5 1555 1555 1.54 LINK O2 MAN I 5 C1 MAN I 6 1555 1555 1.61 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.46 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.47 LINK O3 BMA J 3 C1 MAN J 4 1555 1555 1.46 LINK O6 BMA J 3 C1 MAN J 5 1555 1555 1.44 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.45 LINK O6 NAG K 1 C1 FUC K 6 1555 1555 1.45 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.45 LINK O3 BMA K 3 C1 MAN K 4 1555 1555 1.46 LINK O6 BMA K 3 C1 MAN K 5 1555 1555 1.45 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.46 LINK O4 NAG L 2 C1 BMA L 3 1555 1555 1.45 LINK O6 BMA L 3 C1 MAN L 4 1555 1555 1.45 CRYST1 108.048 108.048 117.701 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009255 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008496 0.00000