HEADER TRANSFERASE 23-MAR-05 2BNF TITLE THE STRUCTURE OF E. COLI UMP KINASE IN COMPLEX WITH UTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: URIDYLATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: UMP KINASE, UK, URIDINE MONOPHOSPHATE KINASE; COMPND 5 EC: 2.7.4.4; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, NUCLEOSIDE MONOPHOSPHATE KINASE, PYRIMIDINE BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR P.BRIOZZO,C.EVRIN,P.MEYER,L.ASSAIRI,N.JOLY,O.BARZU,A.M.GILLES REVDAT 4 20-NOV-24 2BNF 1 LINK REVDAT 3 24-FEB-09 2BNF 1 VERSN REVDAT 2 06-JUL-05 2BNF 1 JRNL REVDAT 1 27-APR-05 2BNF 0 JRNL AUTH P.BRIOZZO,C.EVRIN,P.MEYER,L.ASSAIRI,N.JOLY,O.BARZU, JRNL AUTH 2 A.M.GILLES JRNL TITL STRUCTURE OF ESCHERICHIA COLI UMP KINASE DIFFERS FROM THAT JRNL TITL 2 OF OTHER NUCLEOSIDE MONOPHOSPHATE KINASES AND SHEDS NEW JRNL TITL 3 LIGHT ON ENZYME REGULATION. JRNL REF J.BIOL.CHEM. V. 280 25533 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15857829 JRNL DOI 10.1074/JBC.M501849200 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 15479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 745 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3571 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.78600 REMARK 3 B22 (A**2) : -2.78600 REMARK 3 B33 (A**2) : 5.57100 REMARK 3 B12 (A**2) : -5.53500 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.230 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 34.93 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2BNF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1290023418. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.981019 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 70.95500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.96589 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.12667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 70.95500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 40.96589 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.12667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 70.95500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 40.96589 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.12667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 81.93178 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 40.25333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 81.93178 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 40.25333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 81.93178 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 40.25333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASP 158 TO ASN REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ASP 158 TO ASN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 112 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 GLY B 26 REMARK 465 GLY B 112 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 27 148.87 -173.33 REMARK 500 LEU A 60 -61.88 -137.58 REMARK 500 ASP A 178 102.86 -179.91 REMARK 500 LYS A 234 109.20 -49.33 REMARK 500 GLU A 235 119.23 -166.30 REMARK 500 ALA B 5 -83.10 -27.00 REMARK 500 LYS B 6 131.00 81.59 REMARK 500 THR B 24 137.24 82.57 REMARK 500 LEU B 60 -57.57 -125.06 REMARK 500 PHE B 142 -0.17 74.47 REMARK 500 ASP B 174 109.63 -51.64 REMARK 500 VAL B 199 -56.93 -128.13 REMARK 500 MSE B 200 -131.60 -146.96 REMARK 500 LEU B 202 -51.67 -18.20 REMARK 500 LYS B 234 98.99 -56.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP A1242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP B1242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1244 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BND RELATED DB: PDB REMARK 900 THE STRUCTURE OF E. COLI UMP KINASE IN COMPLEX WITH UDP RELATED REMARK 900 ENTRIES REMARK 900 RELATED ID: 2BNE RELATED DB: PDB REMARK 900 THE STRUCTURE OF E. COLI UMP KINASE IN COMPLEX WITH UMP DBREF 2BNF A 1 1 PDB 2BNF 2BNF 1 1 DBREF 2BNF A 2 241 UNP P29464 PYRH_ECOLI 1 240 DBREF 2BNF B 1 1 PDB 2BNF 2BNF 1 1 DBREF 2BNF B 2 241 UNP P29464 PYRH_ECOLI 1 240 SEQADV 2BNF ASN A 159 UNP P29464 ASP 158 ENGINEERED MUTATION SEQADV 2BNF ASN B 159 UNP P29464 ASP 158 ENGINEERED MUTATION SEQRES 1 A 241 MSE ALA THR ASN ALA LYS PRO VAL TYR LYS ARG ILE LEU SEQRES 2 A 241 LEU LYS LEU SER GLY GLU ALA LEU GLN GLY THR GLU GLY SEQRES 3 A 241 PHE GLY ILE ASP ALA SER ILE LEU ASP ARG MSE ALA GLN SEQRES 4 A 241 GLU ILE LYS GLU LEU VAL GLU LEU GLY ILE GLN VAL GLY SEQRES 5 A 241 VAL VAL ILE GLY GLY GLY ASN LEU PHE ARG GLY ALA GLY SEQRES 6 A 241 LEU ALA LYS ALA GLY MSE ASN ARG VAL VAL GLY ASP HIS SEQRES 7 A 241 MSE GLY MSE LEU ALA THR VAL MSE ASN GLY LEU ALA MSE SEQRES 8 A 241 ARG ASP ALA LEU HIS ARG ALA TYR VAL ASN ALA ARG LEU SEQRES 9 A 241 MSE SER ALA ILE PRO LEU ASN GLY VAL CYS ASP SER TYR SEQRES 10 A 241 SER TRP ALA GLU ALA ILE SER LEU LEU ARG ASN ASN ARG SEQRES 11 A 241 VAL VAL ILE LEU SER ALA GLY THR GLY ASN PRO PHE PHE SEQRES 12 A 241 THR THR ASP SER ALA ALA CYS LEU ARG GLY ILE GLU ILE SEQRES 13 A 241 GLU ALA ASN VAL VAL LEU LYS ALA THR LYS VAL ASP GLY SEQRES 14 A 241 VAL PHE THR ALA ASP PRO ALA LYS ASP PRO THR ALA THR SEQRES 15 A 241 MSE TYR GLU GLN LEU THR TYR SER GLU VAL LEU GLU LYS SEQRES 16 A 241 GLU LEU LYS VAL MSE ASP LEU ALA ALA PHE THR LEU ALA SEQRES 17 A 241 ARG ASP HIS LYS LEU PRO ILE ARG VAL PHE ASN MSE ASN SEQRES 18 A 241 LYS PRO GLY ALA LEU ARG ARG VAL VAL MSE GLY GLU LYS SEQRES 19 A 241 GLU GLY THR LEU ILE THR GLU SEQRES 1 B 241 MSE ALA THR ASN ALA LYS PRO VAL TYR LYS ARG ILE LEU SEQRES 2 B 241 LEU LYS LEU SER GLY GLU ALA LEU GLN GLY THR GLU GLY SEQRES 3 B 241 PHE GLY ILE ASP ALA SER ILE LEU ASP ARG MSE ALA GLN SEQRES 4 B 241 GLU ILE LYS GLU LEU VAL GLU LEU GLY ILE GLN VAL GLY SEQRES 5 B 241 VAL VAL ILE GLY GLY GLY ASN LEU PHE ARG GLY ALA GLY SEQRES 6 B 241 LEU ALA LYS ALA GLY MSE ASN ARG VAL VAL GLY ASP HIS SEQRES 7 B 241 MSE GLY MSE LEU ALA THR VAL MSE ASN GLY LEU ALA MSE SEQRES 8 B 241 ARG ASP ALA LEU HIS ARG ALA TYR VAL ASN ALA ARG LEU SEQRES 9 B 241 MSE SER ALA ILE PRO LEU ASN GLY VAL CYS ASP SER TYR SEQRES 10 B 241 SER TRP ALA GLU ALA ILE SER LEU LEU ARG ASN ASN ARG SEQRES 11 B 241 VAL VAL ILE LEU SER ALA GLY THR GLY ASN PRO PHE PHE SEQRES 12 B 241 THR THR ASP SER ALA ALA CYS LEU ARG GLY ILE GLU ILE SEQRES 13 B 241 GLU ALA ASN VAL VAL LEU LYS ALA THR LYS VAL ASP GLY SEQRES 14 B 241 VAL PHE THR ALA ASP PRO ALA LYS ASP PRO THR ALA THR SEQRES 15 B 241 MSE TYR GLU GLN LEU THR TYR SER GLU VAL LEU GLU LYS SEQRES 16 B 241 GLU LEU LYS VAL MSE ASP LEU ALA ALA PHE THR LEU ALA SEQRES 17 B 241 ARG ASP HIS LYS LEU PRO ILE ARG VAL PHE ASN MSE ASN SEQRES 18 B 241 LYS PRO GLY ALA LEU ARG ARG VAL VAL MSE GLY GLU LYS SEQRES 19 B 241 GLU GLY THR LEU ILE THR GLU MODRES 2BNF MSE A 37 MET SELENOMETHIONINE MODRES 2BNF MSE A 71 MET SELENOMETHIONINE MODRES 2BNF MSE A 79 MET SELENOMETHIONINE MODRES 2BNF MSE A 81 MET SELENOMETHIONINE MODRES 2BNF MSE A 86 MET SELENOMETHIONINE MODRES 2BNF MSE A 91 MET SELENOMETHIONINE MODRES 2BNF MSE A 105 MET SELENOMETHIONINE MODRES 2BNF MSE A 183 MET SELENOMETHIONINE MODRES 2BNF MSE A 200 MET SELENOMETHIONINE MODRES 2BNF MSE A 220 MET SELENOMETHIONINE MODRES 2BNF MSE A 231 MET SELENOMETHIONINE MODRES 2BNF MSE B 37 MET SELENOMETHIONINE MODRES 2BNF MSE B 71 MET SELENOMETHIONINE MODRES 2BNF MSE B 79 MET SELENOMETHIONINE MODRES 2BNF MSE B 81 MET SELENOMETHIONINE MODRES 2BNF MSE B 86 MET SELENOMETHIONINE MODRES 2BNF MSE B 91 MET SELENOMETHIONINE MODRES 2BNF MSE B 105 MET SELENOMETHIONINE MODRES 2BNF MSE B 183 MET SELENOMETHIONINE MODRES 2BNF MSE B 200 MET SELENOMETHIONINE MODRES 2BNF MSE B 220 MET SELENOMETHIONINE MODRES 2BNF MSE B 231 MET SELENOMETHIONINE HET MSE A 37 8 HET MSE A 71 8 HET MSE A 79 8 HET MSE A 81 8 HET MSE A 86 8 HET MSE A 91 8 HET MSE A 105 8 HET MSE A 183 8 HET MSE A 200 8 HET MSE A 220 8 HET MSE A 231 8 HET MSE B 37 8 HET MSE B 71 8 HET MSE B 79 8 HET MSE B 81 8 HET MSE B 86 8 HET MSE B 91 8 HET MSE B 105 8 HET MSE B 183 8 HET MSE B 200 8 HET MSE B 220 8 HET MSE B 231 8 HET UTP A1242 29 HET GOL A1243 6 HET GOL A1244 6 HET GOL A1245 6 HET GOL A1246 6 HET GOL A1247 6 HET UTP B1242 29 HET GOL B1243 6 HET GOL B1244 6 HETNAM MSE SELENOMETHIONINE HETNAM UTP URIDINE 5'-TRIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 22(C5 H11 N O2 SE) FORMUL 3 UTP 2(C9 H15 N2 O15 P3) FORMUL 4 GOL 7(C3 H8 O3) FORMUL 12 HOH *74(H2 O) HELIX 1 1 SER A 17 GLN A 22 5 6 HELIX 2 2 ASP A 30 LEU A 47 1 18 HELIX 3 3 ARG A 62 ALA A 69 1 8 HELIX 4 4 ASN A 72 ALA A 98 1 27 HELIX 5 5 SER A 118 ASN A 128 1 11 HELIX 6 6 THR A 144 ILE A 156 1 13 HELIX 7 7 THR A 188 LYS A 195 1 8 HELIX 8 8 ASP A 201 HIS A 211 1 11 HELIX 9 9 GLY A 224 MSE A 231 1 8 HELIX 10 10 GLY B 18 GLN B 22 5 5 HELIX 11 11 ASP B 30 LEU B 47 1 18 HELIX 12 12 ARG B 62 ALA B 69 1 8 HELIX 13 13 ASN B 72 ARG B 97 1 26 HELIX 14 14 SER B 118 ASN B 128 1 11 HELIX 15 15 THR B 144 ILE B 156 1 13 HELIX 16 16 TYR B 189 LYS B 195 1 7 HELIX 17 17 ASP B 201 HIS B 211 1 11 HELIX 18 18 GLY B 224 GLY B 232 1 9 SHEET 1 AA 9 ASP A 115 SER A 116 0 SHEET 2 AA 9 ALA A 102 SER A 106 1 O LEU A 104 N ASP A 115 SHEET 3 AA 9 VAL A 131 SER A 135 1 O VAL A 131 N ARG A 103 SHEET 4 AA 9 GLN A 50 ILE A 55 1 O VAL A 51 N VAL A 132 SHEET 5 AA 9 ARG A 11 LEU A 16 1 O ILE A 12 N GLY A 52 SHEET 6 AA 9 VAL A 160 THR A 165 1 O VAL A 160 N LEU A 13 SHEET 7 AA 9 ILE A 215 ASN A 219 1 O ARG A 216 N LYS A 163 SHEET 8 AA 9 THR A 237 ILE A 239 -1 O THR A 237 N VAL A 217 SHEET 9 AA 9 GLN A 186 LEU A 187 1 N LEU A 187 O LEU A 238 SHEET 1 AB 2 VAL A 170 PHE A 171 0 SHEET 2 AB 2 MSE A 183 TYR A 184 -1 O TYR A 184 N VAL A 170 SHEET 1 BA 9 ASP B 115 SER B 116 0 SHEET 2 BA 9 ALA B 102 SER B 106 1 O LEU B 104 N ASP B 115 SHEET 3 BA 9 VAL B 131 SER B 135 1 O VAL B 131 N ARG B 103 SHEET 4 BA 9 GLN B 50 ILE B 55 1 O VAL B 51 N VAL B 132 SHEET 5 BA 9 ARG B 11 LEU B 16 1 O ILE B 12 N GLY B 52 SHEET 6 BA 9 VAL B 160 THR B 165 1 O VAL B 160 N LEU B 13 SHEET 7 BA 9 ILE B 215 ASN B 219 1 O ARG B 216 N LYS B 163 SHEET 8 BA 9 THR B 237 THR B 240 -1 O THR B 237 N VAL B 217 SHEET 9 BA 9 GLN B 186 THR B 188 1 O LEU B 187 N THR B 240 SHEET 1 BB 2 VAL B 170 PHE B 171 0 SHEET 2 BB 2 MSE B 183 TYR B 184 -1 O TYR B 184 N VAL B 170 LINK C ARG A 36 N MSE A 37 1555 1555 1.33 LINK C MSE A 37 N ALA A 38 1555 1555 1.33 LINK C GLY A 70 N MSE A 71 1555 1555 1.33 LINK C MSE A 71 N ASN A 72 1555 1555 1.33 LINK C HIS A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N GLY A 80 1555 1555 1.33 LINK C GLY A 80 N MSE A 81 1555 1555 1.33 LINK C MSE A 81 N LEU A 82 1555 1555 1.32 LINK C VAL A 85 N MSE A 86 1555 1555 1.33 LINK C MSE A 86 N ASN A 87 1555 1555 1.34 LINK C ALA A 90 N MSE A 91 1555 1555 1.33 LINK C MSE A 91 N ARG A 92 1555 1555 1.33 LINK C LEU A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N SER A 106 1555 1555 1.33 LINK C THR A 182 N MSE A 183 1555 1555 1.33 LINK C MSE A 183 N TYR A 184 1555 1555 1.33 LINK C VAL A 199 N MSE A 200 1555 1555 1.33 LINK C MSE A 200 N ASP A 201 1555 1555 1.33 LINK C ASN A 219 N MSE A 220 1555 1555 1.33 LINK C MSE A 220 N ASN A 221 1555 1555 1.33 LINK C VAL A 230 N MSE A 231 1555 1555 1.33 LINK C MSE A 231 N GLY A 232 1555 1555 1.33 LINK C ARG B 36 N MSE B 37 1555 1555 1.33 LINK C MSE B 37 N ALA B 38 1555 1555 1.33 LINK C GLY B 70 N MSE B 71 1555 1555 1.32 LINK C MSE B 71 N ASN B 72 1555 1555 1.33 LINK C HIS B 78 N MSE B 79 1555 1555 1.32 LINK C MSE B 79 N GLY B 80 1555 1555 1.33 LINK C GLY B 80 N MSE B 81 1555 1555 1.33 LINK C MSE B 81 N LEU B 82 1555 1555 1.34 LINK C VAL B 85 N MSE B 86 1555 1555 1.33 LINK C MSE B 86 N ASN B 87 1555 1555 1.33 LINK C ALA B 90 N MSE B 91 1555 1555 1.33 LINK C MSE B 91 N ARG B 92 1555 1555 1.33 LINK C LEU B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N SER B 106 1555 1555 1.33 LINK C THR B 182 N MSE B 183 1555 1555 1.33 LINK C MSE B 183 N TYR B 184 1555 1555 1.33 LINK C VAL B 199 N MSE B 200 1555 1555 1.33 LINK C MSE B 200 N ASP B 201 1555 1555 1.33 LINK C ASN B 219 N MSE B 220 1555 1555 1.33 LINK C MSE B 220 N ASN B 221 1555 1555 1.33 LINK C VAL B 230 N MSE B 231 1555 1555 1.33 LINK C MSE B 231 N GLY B 232 1555 1555 1.33 SITE 1 AC1 20 LYS A 15 SER A 17 GLY A 18 GLY A 56 SITE 2 AC1 20 GLY A 57 GLY A 58 PHE A 61 ARG A 62 SITE 3 AC1 20 GLY A 63 ASP A 77 GLY A 80 MSE A 81 SITE 4 AC1 20 THR A 138 ASN A 140 PRO A 141 PHE A 143 SITE 5 AC1 20 THR A 144 THR A 145 HOH A2009 HOH A2040 SITE 1 AC2 21 LYS B 15 SER B 17 GLY B 18 GLU B 19 SITE 2 AC2 21 GLY B 56 GLY B 57 GLY B 58 PHE B 61 SITE 3 AC2 21 ARG B 62 GLY B 63 ASP B 77 GLY B 80 SITE 4 AC2 21 MSE B 81 THR B 138 ASN B 140 PRO B 141 SITE 5 AC2 21 PHE B 143 THR B 144 THR B 145 HOH B2012 SITE 6 AC2 21 HOH B2025 SITE 1 AC3 5 GLN A 39 LYS A 42 GOL A1244 GLN B 39 SITE 2 AC3 5 GLU B 46 SITE 1 AC4 5 GLN A 39 GLU A 46 GOL A1243 GLN B 39 SITE 2 AC4 5 LYS B 42 SITE 1 AC5 4 GLY A 58 LEU A 60 PHE A 61 ARG A 62 SITE 1 AC6 7 VAL A 192 LEU A 193 LEU A 197 VAL A 199 SITE 2 AC6 7 MSE A 200 LEU A 202 HOH A2033 SITE 1 AC7 4 VAL A 100 ASN A 101 ARG A 127 HOH A2041 SITE 1 AC8 3 ASP A 210 HIS A 211 ARG B 73 SITE 1 AC9 3 VAL B 100 ASN B 101 HOH B2033 CRYST1 141.910 141.910 60.380 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007047 0.004068 0.000000 0.00000 SCALE2 0.000000 0.008137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016562 0.00000