HEADER CHAPERONE 21-MAY-05 2BSI TITLE CRYSTAL STRUCTURE OF THE TYPE III SECRETION CHAPERONE SYCT FROM TITLE 2 YERSINIA ENTEROCOLITICA (CRYSTAL FORM 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: YOPT CHAPERONE SYCT; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTEROCOLITICA; SOURCE 3 ORGANISM_TAXID: 630; SOURCE 4 STRAIN: W22703; SOURCE 5 VARIANT: SEROTYPE O\:9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-M-30; SOURCE 10 OTHER_DETAILS: YERSINIA ENTEROCOLITICA VIRULENCE PLASMID PYVE227 KEYWDS TYPE III SECRETION, YERSINIA, CHAPERONE, EFFECTOR, YOPT EXPDTA X-RAY DIFFRACTION AUTHOR C.R.BUTTNER,G.R.CORNELIS,D.W.HEINZ,H.H.NIEMANN REVDAT 6 13-DEC-23 2BSI 1 REMARK REVDAT 5 15-MAY-19 2BSI 1 REMARK REVDAT 4 03-APR-19 2BSI 1 REMARK LINK REVDAT 3 13-JUL-11 2BSI 1 VERSN REVDAT 2 24-FEB-09 2BSI 1 VERSN REVDAT 1 26-SEP-05 2BSI 0 JRNL AUTH C.R.BUTTNER,G.R.CORNELIS,D.W.HEINZ,H.H.NIEMANN JRNL TITL CRYSTAL STRUCTURE OF YERSINIA ENTEROCOLITICA TYPE III JRNL TITL 2 SECRETION CHAPERONE SYCT. JRNL REF PROTEIN SCI. V. 14 1993 2005 JRNL REFN ISSN 0961-8368 JRNL PMID 16046625 JRNL DOI 10.1110/PS.051474605 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 15511 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 821 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1099 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1876 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.28000 REMARK 3 B22 (A**2) : -2.08000 REMARK 3 B33 (A**2) : 4.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.225 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.329 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2013 ; 0.022 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2745 ; 2.071 ; 1.919 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 246 ; 7.153 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;37.424 ;25.726 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;18.010 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;23.833 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 291 ; 0.150 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1596 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 911 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1375 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 141 ; 0.189 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 61 ; 0.233 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.253 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1254 ; 1.330 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1921 ; 1.957 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 914 ; 3.001 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 824 ; 3.889 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): -20.8630 -14.1680 -15.2750 REMARK 3 T TENSOR REMARK 3 T11: -0.0769 T22: -0.1301 REMARK 3 T33: -0.2515 T12: -0.0053 REMARK 3 T13: 0.0274 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 7.1489 L22: 4.3901 REMARK 3 L33: 1.1075 L12: 2.3633 REMARK 3 L13: 1.4381 L23: 0.1672 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: -0.1441 S13: -0.3817 REMARK 3 S21: 0.1416 S22: -0.0499 S23: 0.2140 REMARK 3 S31: 0.0394 S32: -0.0867 S33: 0.0060 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 113 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7170 2.5000 -15.5030 REMARK 3 T TENSOR REMARK 3 T11: -0.0870 T22: -0.1597 REMARK 3 T33: -0.2362 T12: -0.0035 REMARK 3 T13: -0.0346 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 5.8958 L22: 4.7291 REMARK 3 L33: 1.5335 L12: 1.5562 REMARK 3 L13: -0.4875 L23: -0.0514 REMARK 3 S TENSOR REMARK 3 S11: -0.0611 S12: -0.1212 S13: 0.2786 REMARK 3 S21: 0.0894 S22: 0.0430 S23: -0.4276 REMARK 3 S31: -0.0760 S32: 0.0215 S33: 0.0180 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2BSI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1290023539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16331 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : 0.32000 REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2BSH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 0.1 M CAPS PH REMARK 280 10.5, 150 MM LITHIUM SULFATE HANGING-DROP VAPOR DIFFUSION AT 4 REMARK 280 DEG C, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.76950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.22000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.54500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.22000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.76950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.54500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 PRO A 114 REMARK 465 GLN A 115 REMARK 465 ASN A 116 REMARK 465 THR A 117 REMARK 465 LYS A 118 REMARK 465 PHE A 119 REMARK 465 GLN A 120 REMARK 465 PRO A 121 REMARK 465 ASN A 122 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 PRO B 114 REMARK 465 GLN B 115 REMARK 465 ASN B 116 REMARK 465 THR B 117 REMARK 465 LYS B 118 REMARK 465 PHE B 119 REMARK 465 GLN B 120 REMARK 465 PRO B 121 REMARK 465 ASN B 122 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR B 28 CD1 TYR B 28 CE1 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 55 N - CA - C ANGL. DEV. = 18.8 DEGREES REMARK 500 LEU A 92 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG B 76 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 35 -34.39 -149.91 REMARK 500 GLN A 46 -29.31 -146.24 REMARK 500 LEU A 77 111.00 -167.42 REMARK 500 GLN B 46 -30.53 -145.57 REMARK 500 GLN B 46 -30.53 -136.89 REMARK 500 ASP B 62 -16.28 -48.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2023 DISTANCE = 5.97 ANGSTROMS REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BHO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE YERSINIA ENTEROCOLITICA TYPE III SECRETION REMARK 900 CHAPERONE SYCT REMARK 900 RELATED ID: 2BSH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE YERSINIA ENTEROCOLITICA TYPE III SECRETION REMARK 900 CHAPERONE SYCT (CRYSTAL FORM 2) REMARK 900 RELATED ID: 2BSJ RELATED DB: PDB REMARK 900 NATIVE CRYSTAL STRUCTURE OF THE YERSINIA ENTEROCOLITICA TYPE III REMARK 900 SECRETION CHAPERONE SYCT DBREF 2BSI A -2 1 PDB 2BSI 2BSI -2 1 DBREF 2BSI A 2 122 UNP O85243 SYCT_YEREN 2 122 DBREF 2BSI B -2 1 PDB 2BSI 2BSI -2 1 DBREF 2BSI B 2 122 UNP O85243 SYCT_YEREN 2 122 SEQRES 1 A 125 GLY ALA MSE GLY GLN THR THR PHE THR GLU LEU MSE GLN SEQRES 2 A 125 GLN LEU PHE LEU LYS LEU GLY LEU ASN HIS GLN VAL ASN SEQRES 3 A 125 GLU ASN ASP VAL TYR THR PHE GLU VAL ASP GLY HIS ILE SEQRES 4 A 125 GLN VAL LEU ILE ALA CYS TYR HIS GLN GLN TRP VAL GLN SEQRES 5 A 125 LEU PHE SER GLU LEU GLY ALA ASP LEU PRO THR ASN ASP SEQRES 6 A 125 ASN LEU PHE GLY GLU HIS TRP PRO ALA HIS VAL GLN GLY SEQRES 7 A 125 ARG LEU ASP GLY LYS SER ILE LEU TRP SER GLN GLN SER SEQRES 8 A 125 LEU VAL GLY LEU ASP ILE ASP GLU MSE GLN ALA TRP LEU SEQRES 9 A 125 GLU ARG PHE ILE ASP ASP ILE GLU GLN ARG LYS GLU PRO SEQRES 10 A 125 GLN ASN THR LYS PHE GLN PRO ASN SEQRES 1 B 125 GLY ALA MSE GLY GLN THR THR PHE THR GLU LEU MSE GLN SEQRES 2 B 125 GLN LEU PHE LEU LYS LEU GLY LEU ASN HIS GLN VAL ASN SEQRES 3 B 125 GLU ASN ASP VAL TYR THR PHE GLU VAL ASP GLY HIS ILE SEQRES 4 B 125 GLN VAL LEU ILE ALA CYS TYR HIS GLN GLN TRP VAL GLN SEQRES 5 B 125 LEU PHE SER GLU LEU GLY ALA ASP LEU PRO THR ASN ASP SEQRES 6 B 125 ASN LEU PHE GLY GLU HIS TRP PRO ALA HIS VAL GLN GLY SEQRES 7 B 125 ARG LEU ASP GLY LYS SER ILE LEU TRP SER GLN GLN SER SEQRES 8 B 125 LEU VAL GLY LEU ASP ILE ASP GLU MSE GLN ALA TRP LEU SEQRES 9 B 125 GLU ARG PHE ILE ASP ASP ILE GLU GLN ARG LYS GLU PRO SEQRES 10 B 125 GLN ASN THR LYS PHE GLN PRO ASN MODRES 2BSI MSE A 0 MET SELENOMETHIONINE MODRES 2BSI MSE A 9 MET SELENOMETHIONINE MODRES 2BSI MSE A 97 MET SELENOMETHIONINE MODRES 2BSI MSE B 0 MET SELENOMETHIONINE MODRES 2BSI MSE B 9 MET SELENOMETHIONINE MODRES 2BSI MSE B 97 MET SELENOMETHIONINE HET MSE A 0 8 HET MSE A 9 8 HET MSE A 97 8 HET MSE B 0 8 HET MSE B 9 8 HET MSE B 97 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *123(H2 O) HELIX 1 1 GLN A 2 LEU A 16 1 15 HELIX 2 2 ILE A 94 LYS A 112 1 19 HELIX 3 3 MSE B 0 LEU B 16 1 17 HELIX 4 4 ILE B 94 ARG B 111 1 18 SHEET 1 AA 6 GLN A 21 ASN A 23 0 SHEET 2 AA 6 VAL A 27 GLU A 31 -1 O THR A 29 N GLN A 21 SHEET 3 AA 6 GLN A 37 TYR A 43 -1 O ILE A 36 N VAL A 32 SHEET 4 AA 6 TRP A 47 GLY A 55 -1 O TRP A 47 N TYR A 43 SHEET 5 AA 6 LYS A 80 SER A 88 -1 O LEU A 83 N SER A 52 SHEET 6 AA 6 HIS A 72 LEU A 77 -1 O VAL A 73 N TRP A 84 SHEET 1 BA 6 HIS B 20 ASN B 23 0 SHEET 2 BA 6 VAL B 27 VAL B 32 -1 O THR B 29 N GLN B 21 SHEET 3 BA 6 ILE B 36 TYR B 43 -1 O ILE B 36 N VAL B 32 SHEET 4 BA 6 TRP B 47 GLY B 55 -1 O TRP B 47 N TYR B 43 SHEET 5 BA 6 LYS B 80 SER B 88 -1 O LEU B 83 N SER B 52 SHEET 6 BA 6 HIS B 72 LEU B 77 -1 O VAL B 73 N TRP B 84 LINK C MSE A 0 N GLY A 1 1555 1555 1.34 LINK C LEU A 8 N MSE A 9 1555 1555 1.33 LINK C MSE A 9 N GLN A 10 1555 1555 1.33 LINK C GLU A 96 N MSE A 97 1555 1555 1.34 LINK C MSE A 97 N GLN A 98 1555 1555 1.33 LINK C MSE B 0 N GLY B 1 1555 1555 1.34 LINK C LEU B 8 N MSE B 9 1555 1555 1.34 LINK C MSE B 9 N GLN B 10 1555 1555 1.32 LINK C GLU B 96 N MSE B 97 1555 1555 1.33 LINK C MSE B 97 N GLN B 98 1555 1555 1.32 CISPEP 1 MSE A 0 GLY A 1 0 1.61 CISPEP 2 TRP A 69 PRO A 70 0 5.44 CISPEP 3 LYS A 112 GLU A 113 0 3.85 CISPEP 4 TRP B 69 PRO B 70 0 4.01 CRYST1 51.539 63.090 74.440 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019403 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015850 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013434 0.00000 MTRIX1 1 -0.999970 -0.002340 -0.007600 -25.93130 1 MTRIX2 1 0.002100 -0.999490 0.031730 -11.24665 1 MTRIX3 1 -0.007670 0.031720 0.999470 0.12778 1 HETATM 1 N MSE A 0 -26.415 -6.123 -31.849 1.00 72.83 N HETATM 2 CA MSE A 0 -25.756 -4.852 -32.210 1.00 74.12 C HETATM 3 C MSE A 0 -26.333 -3.672 -31.423 1.00 70.65 C HETATM 4 O MSE A 0 -27.066 -2.839 -32.002 1.00 70.61 O HETATM 5 CB MSE A 0 -25.892 -4.607 -33.713 1.00 74.05 C HETATM 6 CG MSE A 0 -27.222 -5.057 -34.305 1.00 76.64 C HETATM 7 SE MSE A 0 -27.654 -3.934 -35.835 1.00 82.77 SE HETATM 8 CE MSE A 0 -29.123 -5.079 -36.752 1.00 78.73 C