data_2BU1 # _entry.id 2BU1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2BU1 pdb_00002bu1 10.2210/pdb2bu1/pdb PDBE EBI-24401 ? ? WWPDB D_1290024401 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-08-18 2 'Structure model' 1 1 2019-10-09 3 'Structure model' 1 2 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' struct_conn 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_initial_refinement_model 8 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.page_last' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_pdbx_database_status.status_code_sf' 5 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' 8 3 'Structure model' '_pdbx_struct_oper_list.name' 9 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 10 3 'Structure model' '_pdbx_struct_oper_list.type' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2005-11-18 _pdbx_database_PDB_obs_spr.pdb_id 2BU1 _pdbx_database_PDB_obs_spr.replace_pdb_id 1E6T _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BU1 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-06-08 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1AQ3 unspecified 'STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH ANRNA OPERATOR' PDB 1AQ4 unspecified 'STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH ANRNA OPERATOR' PDB 1BMS unspecified 'MOL_ID: 1; MOLECULE: BACTERIOPHAGE MS2 CAPSID; CHAIN: A, B, C; ENGINEERED: YES; MUTATION: P78N' PDB 1DZS unspecified 'MS2-RNA HAIRPIN (4ONE -5) COMPLEX' PDB 1E7X unspecified 'MS2-RNA HAIRPIN (2ONE -5) COMPLEX' PDB 1GKV unspecified 'MS2-RNA HAIRPIN (C-7) COMPLEX' PDB 1GKW unspecified 'MS2-RNA HAIRPIN (G-10) COMPLEX' PDB 1H8J unspecified 'MS2-RNA HAIRPIN (G -5) COMPLEX' PDB 1HDW unspecified 'MS2-RNA HAIRPIN (2THIO-U -5-6) COMPLEX' PDB 1HE0 unspecified 'MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEX' PDB 1HE6 unspecified 'MS2-RNA HAIRPIN (ADE -5) COMPLEX' PDB 1KUO unspecified 'MS2-RNA HAIRPIN (C-10) COMPLEX' PDB 1MSC unspecified . PDB 1MST unspecified 'MOL_ID: 1; MOLECULE: BACTERIOPHAGE MS2 CAPSID; CHAIN: A, B, C; ENGINEERED: YES; MUTATION: E76D' PDB 1MVA unspecified 'STRUCTURE OF A PROTEIN CAPSID OF THE T45A MUTANT OF PHAGEMS2' PDB 1MVB unspecified 'STRUCTURE OF A PROTEIN CAPSID OF THE T59S MUTANT OF PHAGEMS2' PDB 1U1Y unspecified ;CRYSTAL STRUCTURE OF A COMPLEX BETWEEN WT BACTERIOPHAGE MS2COAT PROTEIN AND AN F5 APTAMER RNA STEMLOOP WITH2AMINOPURINE SUBSTITUTED AT THE-10 POSITION ; PDB 1ZDH unspecified 'STRUCTURE OF BACTERIOPHAGE COAT PROTEIN- OPERATOR COMPLEX' PDB 1ZDI unspecified 'STRUCTURE OF MS2 PROTEIN CAPSID' PDB 1ZDJ unspecified 'STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX' PDB 1ZDK unspecified 'STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX' PDB 2BNY unspecified 'MS2 (N87A MUTANT) - RNA HAIRPIN COMPLEX' PDB 2BQ5 unspecified 'MS2 (N87AE89K MUTANT) - RNA HAIRPIN COMPLEX' PDB 2BS0 unspecified 'MS2 (N87AE89K MUTANT) - VARIANT QBETA RNA HAIRPIN COMPLEX' PDB 2BS1 unspecified 'MS2 (N87AE89K MUTANT) - QBETA RNA HAIRPIN COMPLEX' PDB 2BU1 unspecified 'MS2-RNA HAIRPIN (5BRU -5) COMPLEX' PDB 2C4Q unspecified 'MS2-RNA HAIRPIN (2ONE -5) COMPLEX' PDB 2C4Y unspecified 'MS2-RNA HAIRPIN (SU-5) COMPLEX' PDB 2C4Z unspecified 'MS2-RNA HAIRPIN (2SU -5-6) COMPLEX' PDB 2C50 unspecified 'MS2-RNA HAIRPIN (A -5) COMPLEX' PDB 2C51 unspecified 'MS2-RNA HAIRPIN (G -5) COMPLEX' PDB 2MS2 unspecified 'MS2 VIRUS (BACTERIOPHAGE)' PDB 5MSF unspecified 'F5 APTAMER MS2 COAT PROTEIN COMPLEX' PDB 6MSF unspecified 'F6 APTAMER MS2 COAT PROTEIN COMPLEX' PDB 7MSF unspecified 'F7 APTAMER MS2 COAT PROTEIN COMPLEX' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Grahn, E.' 1 'Moss, T.' 2 'Helgstrand, C.' 3 'Fridborg, K.' 4 'Sundaram, M.' 5 'Tars, K.' 6 'Lago, H.' 7 'Stonehouse, N.J.' 8 'Davis, D.R.' 9 'Stockley, P.G.' 10 'Liljas, L.' 11 # _citation.id primary _citation.title 'Structural basis of pyrimidine specificity in the MS2 RNA hairpin-coat-protein complex.' _citation.journal_abbrev Rna _citation.journal_volume 7 _citation.page_first 1616 _citation.page_last 1627 _citation.year 2001 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11720290 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Grahn, E.' 1 ? primary 'Moss, T.' 2 ? primary 'Helgstrand, C.' 3 ? primary 'Fridborg, K.' 4 ? primary 'Sundaram, M.' 5 ? primary 'Tars, K.' 6 ? primary 'Lago, H.' 7 ? primary 'Stonehouse, N.J.' 8 ? primary 'Davis, D.R.' 9 ? primary 'Stockley, P.G.' 10 ? primary 'Liljas, L.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MS2 COAT PROTEIN' 13738.464 3 ? ? ? ? 2 polymer syn ;5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3' ; 6141.553 2 ? ? 'COAT PROTEIN-BINDING HAIRPIN, RESIDUES 2-18' ? 3 water nat water 18.015 205 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVA AWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY ; ;ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVA AWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY ; A,B,C ? 2 polyribonucleotide no yes 'ACAUGAGGAU(5BU)ACCCAUGU' ACAUGAGGAUUACCCAUGU R,S ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 ASN n 1 4 PHE n 1 5 THR n 1 6 GLN n 1 7 PHE n 1 8 VAL n 1 9 LEU n 1 10 VAL n 1 11 ASP n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 THR n 1 16 GLY n 1 17 ASP n 1 18 VAL n 1 19 THR n 1 20 VAL n 1 21 ALA n 1 22 PRO n 1 23 SER n 1 24 ASN n 1 25 PHE n 1 26 ALA n 1 27 ASN n 1 28 GLY n 1 29 VAL n 1 30 ALA n 1 31 GLU n 1 32 TRP n 1 33 ILE n 1 34 SER n 1 35 SER n 1 36 ASN n 1 37 SER n 1 38 ARG n 1 39 SER n 1 40 GLN n 1 41 ALA n 1 42 TYR n 1 43 LYS n 1 44 VAL n 1 45 THR n 1 46 CYS n 1 47 SER n 1 48 VAL n 1 49 ARG n 1 50 GLN n 1 51 SER n 1 52 SER n 1 53 ALA n 1 54 GLN n 1 55 ASN n 1 56 ARG n 1 57 LYS n 1 58 TYR n 1 59 THR n 1 60 ILE n 1 61 LYS n 1 62 VAL n 1 63 GLU n 1 64 VAL n 1 65 PRO n 1 66 LYS n 1 67 VAL n 1 68 ALA n 1 69 THR n 1 70 GLN n 1 71 THR n 1 72 VAL n 1 73 GLY n 1 74 GLY n 1 75 VAL n 1 76 GLU n 1 77 LEU n 1 78 PRO n 1 79 VAL n 1 80 ALA n 1 81 ALA n 1 82 TRP n 1 83 ARG n 1 84 SER n 1 85 TYR n 1 86 LEU n 1 87 ASN n 1 88 MET n 1 89 GLU n 1 90 LEU n 1 91 THR n 1 92 ILE n 1 93 PRO n 1 94 ILE n 1 95 PHE n 1 96 ALA n 1 97 THR n 1 98 ASN n 1 99 SER n 1 100 ASP n 1 101 CYS n 1 102 GLU n 1 103 LEU n 1 104 ILE n 1 105 VAL n 1 106 LYS n 1 107 ALA n 1 108 MET n 1 109 GLN n 1 110 GLY n 1 111 LEU n 1 112 LEU n 1 113 LYS n 1 114 ASP n 1 115 GLY n 1 116 ASN n 1 117 PRO n 1 118 ILE n 1 119 PRO n 1 120 SER n 1 121 ALA n 1 122 ILE n 1 123 ALA n 1 124 ALA n 1 125 ASN n 1 126 SER n 1 127 GLY n 1 128 ILE n 1 129 TYR n 2 1 A n 2 2 C n 2 3 A n 2 4 U n 2 5 G n 2 6 A n 2 7 G n 2 8 G n 2 9 A n 2 10 U n 2 11 5BU n 2 12 A n 2 13 C n 2 14 C n 2 15 C n 2 16 A n 2 17 U n 2 18 G n 2 19 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BACTERIOPHAGE MS2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12022 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'BACTERIOPHAGE MS2' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 12022 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5BU 'RNA linking' n "5-BROMO-URIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O9 P' 403.077 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 TRP 32 32 32 TRP TRP A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 CYS 46 46 46 CYS CYS A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 TYR 129 129 129 TYR TYR A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 PHE 7 7 7 PHE PHE B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 ASN 12 12 12 ASN ASN B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 THR 19 19 19 THR THR B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 ASN 24 24 24 ASN ASN B . n B 1 25 PHE 25 25 25 PHE PHE B . n B 1 26 ALA 26 26 26 ALA ALA B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 GLU 31 31 31 GLU GLU B . n B 1 32 TRP 32 32 32 TRP TRP B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 SER 35 35 35 SER SER B . n B 1 36 ASN 36 36 36 ASN ASN B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 ARG 38 38 38 ARG ARG B . n B 1 39 SER 39 39 39 SER SER B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 CYS 46 46 46 CYS CYS B . n B 1 47 SER 47 47 47 SER SER B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 ARG 49 49 49 ARG ARG B . n B 1 50 GLN 50 50 50 GLN GLN B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 ALA 53 53 53 ALA ALA B . n B 1 54 GLN 54 54 54 GLN GLN B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 ARG 56 56 56 ARG ARG B . n B 1 57 LYS 57 57 57 LYS LYS B . n B 1 58 TYR 58 58 58 TYR TYR B . n B 1 59 THR 59 59 59 THR THR B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 LYS 61 61 61 LYS LYS B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 PRO 65 65 65 PRO PRO B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 ALA 68 68 68 ALA ALA B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 GLN 70 70 70 GLN GLN B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 GLU 76 76 76 GLU GLU B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 ALA 80 80 80 ALA ALA B . n B 1 81 ALA 81 81 81 ALA ALA B . n B 1 82 TRP 82 82 82 TRP TRP B . n B 1 83 ARG 83 83 83 ARG ARG B . n B 1 84 SER 84 84 84 SER SER B . n B 1 85 TYR 85 85 85 TYR TYR B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 ASN 87 87 87 ASN ASN B . n B 1 88 MET 88 88 88 MET MET B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 ILE 92 92 92 ILE ILE B . n B 1 93 PRO 93 93 93 PRO PRO B . n B 1 94 ILE 94 94 94 ILE ILE B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 ALA 96 96 96 ALA ALA B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 SER 99 99 99 SER SER B . n B 1 100 ASP 100 100 100 ASP ASP B . n B 1 101 CYS 101 101 101 CYS CYS B . n B 1 102 GLU 102 102 102 GLU GLU B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 ILE 104 104 104 ILE ILE B . n B 1 105 VAL 105 105 105 VAL VAL B . n B 1 106 LYS 106 106 106 LYS LYS B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 MET 108 108 108 MET MET B . n B 1 109 GLN 109 109 109 GLN GLN B . n B 1 110 GLY 110 110 110 GLY GLY B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 LYS 113 113 113 LYS LYS B . n B 1 114 ASP 114 114 114 ASP ASP B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 PRO 117 117 117 PRO PRO B . n B 1 118 ILE 118 118 118 ILE ILE B . n B 1 119 PRO 119 119 119 PRO PRO B . n B 1 120 SER 120 120 120 SER SER B . n B 1 121 ALA 121 121 121 ALA ALA B . n B 1 122 ILE 122 122 122 ILE ILE B . n B 1 123 ALA 123 123 123 ALA ALA B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 ASN 125 125 125 ASN ASN B . n B 1 126 SER 126 126 126 SER SER B . n B 1 127 GLY 127 127 127 GLY GLY B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 TYR 129 129 129 TYR TYR B . n C 1 1 ALA 1 1 1 ALA ALA C . n C 1 2 SER 2 2 2 SER SER C . n C 1 3 ASN 3 3 3 ASN ASN C . n C 1 4 PHE 4 4 4 PHE PHE C . n C 1 5 THR 5 5 5 THR THR C . n C 1 6 GLN 6 6 6 GLN GLN C . n C 1 7 PHE 7 7 7 PHE PHE C . n C 1 8 VAL 8 8 8 VAL VAL C . n C 1 9 LEU 9 9 9 LEU LEU C . n C 1 10 VAL 10 10 10 VAL VAL C . n C 1 11 ASP 11 11 11 ASP ASP C . n C 1 12 ASN 12 12 12 ASN ASN C . n C 1 13 GLY 13 13 13 GLY GLY C . n C 1 14 GLY 14 14 14 GLY GLY C . n C 1 15 THR 15 15 15 THR THR C . n C 1 16 GLY 16 16 16 GLY GLY C . n C 1 17 ASP 17 17 17 ASP ASP C . n C 1 18 VAL 18 18 18 VAL VAL C . n C 1 19 THR 19 19 19 THR THR C . n C 1 20 VAL 20 20 20 VAL VAL C . n C 1 21 ALA 21 21 21 ALA ALA C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 SER 23 23 23 SER SER C . n C 1 24 ASN 24 24 24 ASN ASN C . n C 1 25 PHE 25 25 25 PHE PHE C . n C 1 26 ALA 26 26 26 ALA ALA C . n C 1 27 ASN 27 27 27 ASN ASN C . n C 1 28 GLY 28 28 28 GLY GLY C . n C 1 29 VAL 29 29 29 VAL VAL C . n C 1 30 ALA 30 30 30 ALA ALA C . n C 1 31 GLU 31 31 31 GLU GLU C . n C 1 32 TRP 32 32 32 TRP TRP C . n C 1 33 ILE 33 33 33 ILE ILE C . n C 1 34 SER 34 34 34 SER SER C . n C 1 35 SER 35 35 35 SER SER C . n C 1 36 ASN 36 36 36 ASN ASN C . n C 1 37 SER 37 37 37 SER SER C . n C 1 38 ARG 38 38 38 ARG ARG C . n C 1 39 SER 39 39 39 SER SER C . n C 1 40 GLN 40 40 40 GLN GLN C . n C 1 41 ALA 41 41 41 ALA ALA C . n C 1 42 TYR 42 42 42 TYR TYR C . n C 1 43 LYS 43 43 43 LYS LYS C . n C 1 44 VAL 44 44 44 VAL VAL C . n C 1 45 THR 45 45 45 THR THR C . n C 1 46 CYS 46 46 46 CYS CYS C . n C 1 47 SER 47 47 47 SER SER C . n C 1 48 VAL 48 48 48 VAL VAL C . n C 1 49 ARG 49 49 49 ARG ARG C . n C 1 50 GLN 50 50 50 GLN GLN C . n C 1 51 SER 51 51 51 SER SER C . n C 1 52 SER 52 52 52 SER SER C . n C 1 53 ALA 53 53 53 ALA ALA C . n C 1 54 GLN 54 54 54 GLN GLN C . n C 1 55 ASN 55 55 55 ASN ASN C . n C 1 56 ARG 56 56 56 ARG ARG C . n C 1 57 LYS 57 57 57 LYS LYS C . n C 1 58 TYR 58 58 58 TYR TYR C . n C 1 59 THR 59 59 59 THR THR C . n C 1 60 ILE 60 60 60 ILE ILE C . n C 1 61 LYS 61 61 61 LYS LYS C . n C 1 62 VAL 62 62 62 VAL VAL C . n C 1 63 GLU 63 63 63 GLU GLU C . n C 1 64 VAL 64 64 64 VAL VAL C . n C 1 65 PRO 65 65 65 PRO PRO C . n C 1 66 LYS 66 66 66 LYS LYS C . n C 1 67 VAL 67 67 67 VAL VAL C . n C 1 68 ALA 68 68 68 ALA ALA C . n C 1 69 THR 69 69 69 THR THR C . n C 1 70 GLN 70 70 70 GLN GLN C . n C 1 71 THR 71 71 71 THR THR C . n C 1 72 VAL 72 72 72 VAL VAL C . n C 1 73 GLY 73 73 73 GLY GLY C . n C 1 74 GLY 74 74 74 GLY GLY C . n C 1 75 VAL 75 75 75 VAL VAL C . n C 1 76 GLU 76 76 76 GLU GLU C . n C 1 77 LEU 77 77 77 LEU LEU C . n C 1 78 PRO 78 78 78 PRO PRO C . n C 1 79 VAL 79 79 79 VAL VAL C . n C 1 80 ALA 80 80 80 ALA ALA C . n C 1 81 ALA 81 81 81 ALA ALA C . n C 1 82 TRP 82 82 82 TRP TRP C . n C 1 83 ARG 83 83 83 ARG ARG C . n C 1 84 SER 84 84 84 SER SER C . n C 1 85 TYR 85 85 85 TYR TYR C . n C 1 86 LEU 86 86 86 LEU LEU C . n C 1 87 ASN 87 87 87 ASN ASN C . n C 1 88 MET 88 88 88 MET MET C . n C 1 89 GLU 89 89 89 GLU GLU C . n C 1 90 LEU 90 90 90 LEU LEU C . n C 1 91 THR 91 91 91 THR THR C . n C 1 92 ILE 92 92 92 ILE ILE C . n C 1 93 PRO 93 93 93 PRO PRO C . n C 1 94 ILE 94 94 94 ILE ILE C . n C 1 95 PHE 95 95 95 PHE PHE C . n C 1 96 ALA 96 96 96 ALA ALA C . n C 1 97 THR 97 97 97 THR THR C . n C 1 98 ASN 98 98 98 ASN ASN C . n C 1 99 SER 99 99 99 SER SER C . n C 1 100 ASP 100 100 100 ASP ASP C . n C 1 101 CYS 101 101 101 CYS CYS C . n C 1 102 GLU 102 102 102 GLU GLU C . n C 1 103 LEU 103 103 103 LEU LEU C . n C 1 104 ILE 104 104 104 ILE ILE C . n C 1 105 VAL 105 105 105 VAL VAL C . n C 1 106 LYS 106 106 106 LYS LYS C . n C 1 107 ALA 107 107 107 ALA ALA C . n C 1 108 MET 108 108 108 MET MET C . n C 1 109 GLN 109 109 109 GLN GLN C . n C 1 110 GLY 110 110 110 GLY GLY C . n C 1 111 LEU 111 111 111 LEU LEU C . n C 1 112 LEU 112 112 112 LEU LEU C . n C 1 113 LYS 113 113 113 LYS LYS C . n C 1 114 ASP 114 114 114 ASP ASP C . n C 1 115 GLY 115 115 115 GLY GLY C . n C 1 116 ASN 116 116 116 ASN ASN C . n C 1 117 PRO 117 117 117 PRO PRO C . n C 1 118 ILE 118 118 118 ILE ILE C . n C 1 119 PRO 119 119 119 PRO PRO C . n C 1 120 SER 120 120 120 SER SER C . n C 1 121 ALA 121 121 121 ALA ALA C . n C 1 122 ILE 122 122 122 ILE ILE C . n C 1 123 ALA 123 123 123 ALA ALA C . n C 1 124 ALA 124 124 124 ALA ALA C . n C 1 125 ASN 125 125 125 ASN ASN C . n C 1 126 SER 126 126 126 SER SER C . n C 1 127 GLY 127 127 127 GLY GLY C . n C 1 128 ILE 128 128 128 ILE ILE C . n C 1 129 TYR 129 129 129 TYR TYR C . n D 2 1 A 1 1 ? ? ? R . n D 2 2 C 2 2 2 C C R . n D 2 3 A 3 3 3 A A R . n D 2 4 U 4 4 4 U U R . n D 2 5 G 5 5 5 G G R . n D 2 6 A 6 6 6 A A R . n D 2 7 G 7 7 7 G G R . n D 2 8 G 8 8 8 G G R . n D 2 9 A 9 9 9 A A R . n D 2 10 U 10 10 10 U U R . n D 2 11 5BU 11 11 11 5BU 5BU R . n D 2 12 A 12 12 12 A A R . n D 2 13 C 13 13 13 C C R . n D 2 14 C 14 14 14 C C R . n D 2 15 C 15 15 15 C C R . n D 2 16 A 16 16 16 A A R . n D 2 17 U 17 17 17 U U R . n D 2 18 G 18 18 18 G G R . n D 2 19 U 19 19 ? ? ? R . n E 2 1 A 1 1 ? ? ? S . n E 2 2 C 2 2 2 C C S . n E 2 3 A 3 3 3 A A S . n E 2 4 U 4 4 4 U U S . n E 2 5 G 5 5 5 G G S . n E 2 6 A 6 6 6 A A S . n E 2 7 G 7 7 7 G G S . n E 2 8 G 8 8 8 G G S . n E 2 9 A 9 9 9 A A S . n E 2 10 U 10 10 10 U U S . n E 2 11 5BU 11 11 11 5BU 5BU S . n E 2 12 A 12 12 12 A A S . n E 2 13 C 13 13 13 C C S . n E 2 14 C 14 14 14 C C S . n E 2 15 C 15 15 15 C C S . n E 2 16 A 16 16 16 A A S . n E 2 17 U 17 17 17 U U S . n E 2 18 G 18 18 18 G G S . n E 2 19 U 19 19 ? ? ? S . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 HOH 1 2001 2001 HOH HOH A . F 3 HOH 2 2002 2002 HOH HOH A . F 3 HOH 3 2003 2003 HOH HOH A . F 3 HOH 4 2004 2004 HOH HOH A . F 3 HOH 5 2005 2005 HOH HOH A . F 3 HOH 6 2006 2006 HOH HOH A . F 3 HOH 7 2007 2007 HOH HOH A . F 3 HOH 8 2008 2008 HOH HOH A . F 3 HOH 9 2009 2009 HOH HOH A . F 3 HOH 10 2010 2010 HOH HOH A . F 3 HOH 11 2011 2011 HOH HOH A . F 3 HOH 12 2012 2012 HOH HOH A . F 3 HOH 13 2013 2013 HOH HOH A . F 3 HOH 14 2014 2014 HOH HOH A . F 3 HOH 15 2015 2015 HOH HOH A . F 3 HOH 16 2016 2016 HOH HOH A . F 3 HOH 17 2017 2017 HOH HOH A . F 3 HOH 18 2018 2018 HOH HOH A . F 3 HOH 19 2019 2019 HOH HOH A . F 3 HOH 20 2020 2020 HOH HOH A . F 3 HOH 21 2021 2021 HOH HOH A . F 3 HOH 22 2022 2022 HOH HOH A . F 3 HOH 23 2023 2023 HOH HOH A . F 3 HOH 24 2024 2024 HOH HOH A . F 3 HOH 25 2025 2025 HOH HOH A . F 3 HOH 26 2026 2026 HOH HOH A . F 3 HOH 27 2027 2027 HOH HOH A . F 3 HOH 28 2028 2028 HOH HOH A . F 3 HOH 29 2029 2029 HOH HOH A . F 3 HOH 30 2030 2030 HOH HOH A . F 3 HOH 31 2031 2031 HOH HOH A . F 3 HOH 32 2032 2032 HOH HOH A . F 3 HOH 33 2033 2033 HOH HOH A . F 3 HOH 34 2034 2034 HOH HOH A . F 3 HOH 35 2035 2035 HOH HOH A . F 3 HOH 36 2036 2036 HOH HOH A . F 3 HOH 37 2037 2037 HOH HOH A . F 3 HOH 38 2038 2038 HOH HOH A . F 3 HOH 39 2039 2039 HOH HOH A . F 3 HOH 40 2040 2040 HOH HOH A . F 3 HOH 41 2041 2041 HOH HOH A . F 3 HOH 42 2042 2042 HOH HOH A . F 3 HOH 43 2043 2043 HOH HOH A . F 3 HOH 44 2044 2044 HOH HOH A . F 3 HOH 45 2045 2045 HOH HOH A . F 3 HOH 46 2046 2046 HOH HOH A . F 3 HOH 47 2047 2047 HOH HOH A . F 3 HOH 48 2048 2048 HOH HOH A . F 3 HOH 49 2049 2049 HOH HOH A . F 3 HOH 50 2050 2050 HOH HOH A . F 3 HOH 51 2051 2051 HOH HOH A . F 3 HOH 52 2052 2052 HOH HOH A . F 3 HOH 53 2053 2053 HOH HOH A . F 3 HOH 54 2054 2054 HOH HOH A . F 3 HOH 55 2055 2055 HOH HOH A . F 3 HOH 56 2056 2056 HOH HOH A . F 3 HOH 57 2057 2057 HOH HOH A . F 3 HOH 58 2058 2058 HOH HOH A . F 3 HOH 59 2059 2059 HOH HOH A . F 3 HOH 60 2060 2060 HOH HOH A . F 3 HOH 61 2061 2061 HOH HOH A . F 3 HOH 62 2062 2062 HOH HOH A . F 3 HOH 63 2063 2063 HOH HOH A . G 3 HOH 1 2001 2001 HOH HOH B . G 3 HOH 2 2002 2002 HOH HOH B . G 3 HOH 3 2003 2003 HOH HOH B . G 3 HOH 4 2004 2004 HOH HOH B . G 3 HOH 5 2005 2005 HOH HOH B . G 3 HOH 6 2006 2006 HOH HOH B . G 3 HOH 7 2007 2007 HOH HOH B . G 3 HOH 8 2008 2008 HOH HOH B . G 3 HOH 9 2009 2009 HOH HOH B . G 3 HOH 10 2010 2010 HOH HOH B . G 3 HOH 11 2011 2011 HOH HOH B . G 3 HOH 12 2012 2012 HOH HOH B . G 3 HOH 13 2013 2013 HOH HOH B . G 3 HOH 14 2014 2014 HOH HOH B . G 3 HOH 15 2015 2015 HOH HOH B . G 3 HOH 16 2016 2016 HOH HOH B . G 3 HOH 17 2017 2017 HOH HOH B . G 3 HOH 18 2018 2018 HOH HOH B . G 3 HOH 19 2019 2019 HOH HOH B . G 3 HOH 20 2020 2020 HOH HOH B . G 3 HOH 21 2021 2021 HOH HOH B . G 3 HOH 22 2022 2022 HOH HOH B . G 3 HOH 23 2023 2023 HOH HOH B . G 3 HOH 24 2024 2024 HOH HOH B . G 3 HOH 25 2025 2025 HOH HOH B . G 3 HOH 26 2026 2026 HOH HOH B . G 3 HOH 27 2027 2027 HOH HOH B . G 3 HOH 28 2028 2028 HOH HOH B . G 3 HOH 29 2029 2029 HOH HOH B . G 3 HOH 30 2030 2030 HOH HOH B . G 3 HOH 31 2031 2031 HOH HOH B . G 3 HOH 32 2032 2032 HOH HOH B . G 3 HOH 33 2033 2033 HOH HOH B . G 3 HOH 34 2034 2034 HOH HOH B . G 3 HOH 35 2035 2035 HOH HOH B . G 3 HOH 36 2036 2036 HOH HOH B . G 3 HOH 37 2037 2037 HOH HOH B . G 3 HOH 38 2038 2038 HOH HOH B . G 3 HOH 39 2039 2039 HOH HOH B . G 3 HOH 40 2040 2040 HOH HOH B . G 3 HOH 41 2041 2041 HOH HOH B . G 3 HOH 42 2042 2042 HOH HOH B . G 3 HOH 43 2043 2043 HOH HOH B . G 3 HOH 44 2044 2044 HOH HOH B . G 3 HOH 45 2045 2045 HOH HOH B . G 3 HOH 46 2046 2046 HOH HOH B . G 3 HOH 47 2047 2047 HOH HOH B . G 3 HOH 48 2048 2048 HOH HOH B . G 3 HOH 49 2049 2049 HOH HOH B . G 3 HOH 50 2050 2050 HOH HOH B . G 3 HOH 51 2051 2051 HOH HOH B . G 3 HOH 52 2052 2052 HOH HOH B . G 3 HOH 53 2053 2053 HOH HOH B . G 3 HOH 54 2054 2054 HOH HOH B . G 3 HOH 55 2055 2055 HOH HOH B . G 3 HOH 56 2056 2056 HOH HOH B . G 3 HOH 57 2057 2057 HOH HOH B . G 3 HOH 58 2058 2058 HOH HOH B . G 3 HOH 59 2059 2059 HOH HOH B . G 3 HOH 60 2060 2060 HOH HOH B . G 3 HOH 61 2061 2061 HOH HOH B . G 3 HOH 62 2062 2062 HOH HOH B . G 3 HOH 63 2063 2063 HOH HOH B . G 3 HOH 64 2064 2064 HOH HOH B . G 3 HOH 65 2065 2065 HOH HOH B . G 3 HOH 66 2066 2066 HOH HOH B . G 3 HOH 67 2067 2067 HOH HOH B . G 3 HOH 68 2068 2068 HOH HOH B . G 3 HOH 69 2069 2069 HOH HOH B . G 3 HOH 70 2070 2070 HOH HOH B . G 3 HOH 71 2071 2071 HOH HOH B . G 3 HOH 72 2072 2072 HOH HOH B . G 3 HOH 73 2073 2073 HOH HOH B . G 3 HOH 74 2074 2074 HOH HOH B . G 3 HOH 75 2075 2075 HOH HOH B . G 3 HOH 76 2076 2076 HOH HOH B . G 3 HOH 77 2077 2077 HOH HOH B . G 3 HOH 78 2078 2078 HOH HOH B . H 3 HOH 1 2001 2001 HOH HOH C . H 3 HOH 2 2002 2002 HOH HOH C . H 3 HOH 3 2003 2003 HOH HOH C . H 3 HOH 4 2004 2004 HOH HOH C . H 3 HOH 5 2005 2005 HOH HOH C . H 3 HOH 6 2006 2006 HOH HOH C . H 3 HOH 7 2007 2007 HOH HOH C . H 3 HOH 8 2008 2008 HOH HOH C . H 3 HOH 9 2009 2009 HOH HOH C . H 3 HOH 10 2010 2010 HOH HOH C . H 3 HOH 11 2011 2011 HOH HOH C . H 3 HOH 12 2012 2012 HOH HOH C . H 3 HOH 13 2013 2013 HOH HOH C . H 3 HOH 14 2014 2014 HOH HOH C . H 3 HOH 15 2015 2015 HOH HOH C . H 3 HOH 16 2016 2016 HOH HOH C . H 3 HOH 17 2017 2017 HOH HOH C . H 3 HOH 18 2018 2018 HOH HOH C . H 3 HOH 19 2019 2019 HOH HOH C . H 3 HOH 20 2020 2020 HOH HOH C . H 3 HOH 21 2021 2021 HOH HOH C . H 3 HOH 22 2022 2022 HOH HOH C . H 3 HOH 23 2023 2023 HOH HOH C . H 3 HOH 24 2024 2024 HOH HOH C . H 3 HOH 25 2025 2025 HOH HOH C . H 3 HOH 26 2026 2026 HOH HOH C . H 3 HOH 27 2027 2027 HOH HOH C . H 3 HOH 28 2028 2028 HOH HOH C . H 3 HOH 29 2029 2029 HOH HOH C . H 3 HOH 30 2030 2030 HOH HOH C . H 3 HOH 31 2031 2031 HOH HOH C . H 3 HOH 32 2032 2032 HOH HOH C . H 3 HOH 33 2033 2033 HOH HOH C . H 3 HOH 34 2034 2034 HOH HOH C . H 3 HOH 35 2035 2035 HOH HOH C . H 3 HOH 36 2036 2036 HOH HOH C . H 3 HOH 37 2037 2037 HOH HOH C . H 3 HOH 38 2038 2038 HOH HOH C . H 3 HOH 39 2039 2039 HOH HOH C . H 3 HOH 40 2040 2040 HOH HOH C . H 3 HOH 41 2041 2041 HOH HOH C . H 3 HOH 42 2042 2042 HOH HOH C . H 3 HOH 43 2043 2043 HOH HOH C . H 3 HOH 44 2044 2044 HOH HOH C . H 3 HOH 45 2045 2045 HOH HOH C . H 3 HOH 46 2046 2046 HOH HOH C . H 3 HOH 47 2047 2047 HOH HOH C . H 3 HOH 48 2048 2048 HOH HOH C . H 3 HOH 49 2049 2049 HOH HOH C . H 3 HOH 50 2050 2050 HOH HOH C . H 3 HOH 51 2051 2051 HOH HOH C . H 3 HOH 52 2052 2052 HOH HOH C . H 3 HOH 53 2053 2053 HOH HOH C . H 3 HOH 54 2054 2054 HOH HOH C . H 3 HOH 55 2055 2055 HOH HOH C . H 3 HOH 56 2056 2056 HOH HOH C . H 3 HOH 57 2057 2057 HOH HOH C . H 3 HOH 58 2058 2058 HOH HOH C . H 3 HOH 59 2059 2059 HOH HOH C . H 3 HOH 60 2060 2060 HOH HOH C . H 3 HOH 61 2061 2061 HOH HOH C . H 3 HOH 62 2062 2062 HOH HOH C . H 3 HOH 63 2063 2063 HOH HOH C . I 3 HOH 1 2001 2001 HOH HOH R . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 0.5 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # _cell.entry_id 2BU1 _cell.length_a 288.000 _cell.length_b 288.000 _cell.length_c 653.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 540 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BU1 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 2BU1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 7.4' # _diffrn.id 1 _diffrn.ambient_temp 287 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 1998-08-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.870 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX9.6' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX9.6 _diffrn_source.pdbx_wavelength 0.870 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2BU1 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 47.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 374908 _reflns.number_all ? _reflns.percent_possible_obs 69.0 _reflns.pdbx_Rmerge_I_obs 0.16 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 24.2 _reflns.pdbx_redundancy 3.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.18 _reflns_shell.d_res_low 2.26 _reflns_shell.percent_possible_all 13.0 _reflns_shell.Rmerge_I_obs 0.40 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2BU1 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 372421 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 71.2 _refine.ls_R_factor_obs 0.219 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.244 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 0.1 _refine.ls_number_reflns_R_free 394 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.1 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.303283 _refine.solvent_model_param_bsol 36.9223 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'MS2 RECOMBINANT CAPSIDS' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2BU1 _refine_analyze.Luzzati_coordinate_error_obs 0.31 _refine_analyze.Luzzati_sigma_a_obs 0.34 _refine_analyze.Luzzati_d_res_low_obs 6.00 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.29 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2895 _refine_hist.pdbx_number_atoms_nucleic_acid 728 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 205 _refine_hist.number_atoms_total 3828 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 47.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.10 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.2 _refine_ls_shell.d_res_low 2.4 _refine_ls_shell.number_reflns_R_work 3309 _refine_ls_shell.R_factor_R_work 0.313 _refine_ls_shell.percent_reflns_obs 12.8 _refine_ls_shell.R_factor_R_free 0.364 _refine_ls_shell.R_factor_R_free_error 0.182 _refine_ls_shell.percent_reflns_R_free 0.1 _refine_ls_shell.number_reflns_R_free 4 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA-5BR_MULT.PARAM DNA-RNA-5BR.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? 0.809017 0.110264 -0.577350 0.467086 0.475684 0.745356 0.356822 -0.872678 0.333333 0.00000 0.00000 0.00000 3 generate ? 0.500000 0.645497 -0.577350 0.866025 -0.372678 0.333333 0.000000 -0.666667 -0.745356 0.00000 0.00000 0.00000 4 generate ? 0.500000 0.866025 0.000000 0.645497 -0.372678 -0.666667 -0.577350 0.333333 -0.745356 0.00000 0.00000 0.00000 5 generate ? 0.809017 0.467086 0.356822 0.110264 0.475684 -0.872678 -0.577350 0.745356 0.333333 0.00000 0.00000 0.00000 6 generate ? 0.309017 0.755761 0.577350 0.755761 -0.563661 0.333333 0.577350 0.333333 -0.745356 0.00000 0.00000 0.00000 7 generate ? 0.809017 -0.110264 0.577350 0.467086 -0.475684 -0.745356 0.356822 0.872678 -0.333333 0.00000 0.00000 0.00000 8 generate ? 0.809017 -0.467086 -0.356822 -0.110264 0.475684 -0.872678 0.577350 0.745356 0.333333 0.00000 0.00000 0.00000 9 generate ? 0.309017 0.178411 -0.934172 -0.178411 0.975684 0.127322 0.934172 0.127322 0.333333 0.00000 0.00000 0.00000 10 generate ? 0.000000 0.934172 -0.356822 0.356822 0.333333 0.872678 0.934172 -0.127322 -0.333333 0.00000 0.00000 0.00000 # _database_PDB_matrix.entry_id 2BU1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2BU1 _struct.title 'MS2-RNA HAIRPIN (5BRU -5) COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BU1 _struct_keywords.pdbx_keywords VIRUS/RNA _struct_keywords.text ;VIRUS/RNA, COMPLEX (CAPSID PROTEIN-RNA HAIRPIN), HAIRPIN, CAPSID, LEVIVIRUS, CAPSID PROTEIN, RNA-BINDING, STRUCTURAL PROTEIN, ICOSAHEDRAL VIRUS, VIRUS-RNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP COAT_BPMS2 1 ? ? P03612 ? 2 PDB 2BU1 2 ? ? 2BU1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2BU1 A 1 ? 129 ? P03612 1 ? 129 ? 1 129 2 1 2BU1 B 1 ? 129 ? P03612 1 ? 129 ? 1 129 3 1 2BU1 C 1 ? 129 ? P03612 1 ? 129 ? 1 129 4 2 2BU1 R 1 ? 19 ? 2BU1 1 ? 19 ? 1 19 5 2 2BU1 S 1 ? 19 ? 2BU1 1 ? 19 ? 1 19 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 300-MERIC 300 2 'icosahedral asymmetric unit' ? pentameric 5 3 'icosahedral pentamer' ? 25-meric 25 4 'icosahedral 23 hexamer' ? 30-meric 30 5 'icosahedral asymmetric unit, std point frame' ? pentameric 5 6 'crystal asymmetric unit, crystal frame' ? 50-meric 50 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C,D,E,F,G,H,I 2 1 A,B,C,D,E,F,G,H,I 3 '(1-5)' A,B,C,D,E,F,G,H,I 4 '(1,2,6,10,23,24)' A,B,C,D,E,F,G,H,I 5 P A,B,C,D,E,F,G,H,I 6 '(X0)(1-10)' A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.50000000 -0.86602540 0.00000000 0.00000 -0.30901699 -0.17841104 0.93417236 0.00000 -0.80901699 -0.46708618 -0.35682209 0.00000 X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.80901699 0.11026409 -0.57735027 0.00000 0.46708618 0.47568366 0.74535599 0.00000 0.35682209 -0.87267800 0.33333333 0.00000 3 'point symmetry operation' ? ? 0.50000000 0.64549722 -0.57735027 0.00000 0.86602540 -0.37267800 0.33333333 0.00000 0.00000000 -0.66666667 -0.74535599 0.00000 4 'point symmetry operation' ? ? 0.50000000 0.86602540 0.00000000 0.00000 0.64549722 -0.37267800 -0.66666667 0.00000 -0.57735027 0.33333333 -0.74535599 0.00000 5 'point symmetry operation' ? ? 0.80901699 0.46708618 0.35682209 0.00000 0.11026409 0.47568366 -0.87267800 0.00000 -0.57735027 0.74535599 0.33333333 0.00000 6 'point symmetry operation' ? ? 0.30901699 0.75576131 0.57735027 0.00000 0.75576131 -0.56366100 0.33333333 0.00000 0.57735027 0.33333333 -0.74535599 0.00000 7 'point symmetry operation' ? ? 0.80901699 -0.11026409 0.57735027 0.00000 0.46708618 -0.47568366 -0.74535599 0.00000 0.35682209 0.87267800 -0.33333333 0.00000 8 'point symmetry operation' ? ? 0.80901699 -0.46708618 -0.35682209 0.00000 -0.11026409 0.47568366 -0.87267800 0.00000 0.57735027 0.74535599 0.33333333 0.00000 9 'point symmetry operation' ? ? 0.30901699 0.17841104 -0.93417236 0.00000 -0.17841104 0.97568366 0.12732200 0.00000 0.93417236 0.12732200 0.33333333 0.00000 10 'point symmetry operation' ? ? 0.00000000 0.93417236 -0.35682209 0.00000 0.35682209 0.33333333 0.87267800 0.00000 0.93417236 -0.12732200 -0.33333333 0.00000 11 'point symmetry operation' ? ? -0.80901699 0.11026409 -0.57735027 0.00000 0.11026409 -0.93633900 -0.33333333 0.00000 -0.57735027 -0.33333333 0.74535599 0.00000 12 'point symmetry operation' ? ? -0.80901699 0.46708618 0.35682209 0.00000 -0.46708618 -0.14235033 -0.87267800 0.00000 -0.35682209 -0.87267800 0.33333333 0.00000 13 'point symmetry operation' ? ? -0.30901699 -0.17841104 0.93417236 0.00000 -0.75576131 0.64235033 -0.12732200 0.00000 -0.57735027 -0.74535599 -0.33333333 0.00000 14 'point symmetry operation' ? ? 0.00000000 -0.93417236 0.35682209 0.00000 -0.35682209 0.33333333 0.87267800 0.00000 -0.93417236 -0.12732200 -0.33333333 0.00000 15 'point symmetry operation' ? ? -0.30901699 -0.75576131 -0.57735027 0.00000 0.17841104 -0.64235033 0.74535599 0.00000 -0.93417236 0.12732200 0.33333333 0.00000 16 'point symmetry operation' ? ? -0.50000000 -0.86602540 0.00000000 0.00000 -0.86602540 0.50000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 17 'point symmetry operation' ? ? -0.80901699 -0.46708618 -0.35682209 0.00000 -0.46708618 0.14235033 0.87267800 0.00000 -0.35682209 0.87267800 -0.33333333 0.00000 18 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -0.74535599 0.66666667 0.00000 0.00000000 0.66666667 0.74535599 0.00000 19 'point symmetry operation' ? ? -0.80901699 -0.11026409 0.57735027 0.00000 -0.11026409 -0.93633900 -0.33333333 0.00000 0.57735027 -0.33333333 0.74535599 0.00000 20 'point symmetry operation' ? ? -0.50000000 -0.64549722 0.57735027 0.00000 -0.64549722 -0.16666667 -0.74535599 0.00000 0.57735027 -0.74535599 -0.33333333 0.00000 21 'point symmetry operation' ? ? -0.30901699 0.17841104 -0.93417236 0.00000 0.75576131 0.64235033 -0.12732200 0.00000 0.57735027 -0.74535599 -0.33333333 0.00000 22 'point symmetry operation' ? ? -0.50000000 0.86602540 0.00000000 0.00000 0.86602540 0.50000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 23 'point symmetry operation' ? ? 0.00000000 0.35682209 0.93417236 0.00000 0.93417236 0.33333333 -0.12732200 0.00000 -0.35682209 0.87267800 -0.33333333 0.00000 24 'point symmetry operation' ? ? 0.50000000 -0.64549722 0.57735027 0.00000 0.86602540 0.37267800 -0.33333333 0.00000 0.00000000 0.66666667 0.74535599 0.00000 25 'point symmetry operation' ? ? 0.30901699 -0.75576131 -0.57735027 0.00000 0.75576131 0.56366100 -0.33333333 0.00000 0.57735027 -0.33333333 0.74535599 0.00000 26 'point symmetry operation' ? ? -0.50000000 -0.64549722 0.57735027 0.00000 0.64549722 0.16666667 0.74535599 0.00000 -0.57735027 0.74535599 0.33333333 0.00000 27 'point symmetry operation' ? ? -0.50000000 -0.86602540 0.00000000 0.00000 0.86602540 -0.50000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 28 'point symmetry operation' ? ? -0.80901699 -0.46708618 -0.35682209 0.00000 0.46708618 -0.14235033 -0.87267800 0.00000 0.35682209 -0.87267800 0.33333333 0.00000 29 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 0.74535599 -0.66666667 0.00000 0.00000000 -0.66666667 -0.74535599 0.00000 30 'point symmetry operation' ? ? -0.80901699 -0.11026409 0.57735027 0.00000 0.11026409 0.93633900 0.33333333 0.00000 -0.57735027 0.33333333 -0.74535599 0.00000 31 'point symmetry operation' ? ? 0.80901699 0.11026409 -0.57735027 0.00000 -0.46708618 -0.47568366 -0.74535599 0.00000 -0.35682209 0.87267800 -0.33333333 0.00000 32 'point symmetry operation' ? ? 0.50000000 0.64549722 -0.57735027 0.00000 -0.86602540 0.37267800 -0.33333333 0.00000 0.00000000 0.66666667 0.74535599 0.00000 33 'point symmetry operation' ? ? 0.50000000 0.86602540 0.00000000 0.00000 -0.64549722 0.37267800 0.66666667 0.00000 0.57735027 -0.33333333 0.74535599 0.00000 34 'point symmetry operation' ? ? 0.80901699 0.46708618 0.35682209 0.00000 -0.11026409 -0.47568366 0.87267800 0.00000 0.57735027 -0.74535599 -0.33333333 0.00000 35 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 36 'point symmetry operation' ? ? 0.00000000 0.35682209 0.93417236 0.00000 -0.93417236 -0.33333333 0.12732200 0.00000 0.35682209 -0.87267800 0.33333333 0.00000 37 'point symmetry operation' ? ? 0.50000000 -0.64549722 0.57735027 0.00000 -0.86602540 -0.37267800 0.33333333 0.00000 0.00000000 -0.66666667 -0.74535599 0.00000 38 'point symmetry operation' ? ? 0.30901699 -0.75576131 -0.57735027 0.00000 -0.75576131 -0.56366100 0.33333333 0.00000 -0.57735027 0.33333333 -0.74535599 0.00000 39 'point symmetry operation' ? ? -0.30901699 0.17841104 -0.93417236 0.00000 -0.75576131 -0.64235033 0.12732200 0.00000 -0.57735027 0.74535599 0.33333333 0.00000 40 'point symmetry operation' ? ? -0.50000000 0.86602540 0.00000000 0.00000 -0.86602540 -0.50000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 41 'point symmetry operation' ? ? -0.30901699 0.75576131 0.57735027 0.00000 0.17841104 0.64235033 -0.74535599 0.00000 -0.93417236 -0.12732200 -0.33333333 0.00000 42 'point symmetry operation' ? ? 0.30901699 -0.17841104 0.93417236 0.00000 0.17841104 0.97568366 0.12732200 0.00000 -0.93417236 0.12732200 0.33333333 0.00000 43 'point symmetry operation' ? ? 0.50000000 -0.86602540 0.00000000 0.00000 0.64549722 0.37267800 0.66666667 0.00000 -0.57735027 -0.33333333 0.74535599 0.00000 44 'point symmetry operation' ? ? 0.00000000 -0.35682209 -0.93417236 0.00000 0.93417236 -0.33333333 0.12732200 0.00000 -0.35682209 -0.87267800 0.33333333 0.00000 45 'point symmetry operation' ? ? -0.50000000 0.64549722 -0.57735027 0.00000 0.64549722 -0.16666667 -0.74535599 0.00000 -0.57735027 -0.74535599 -0.33333333 0.00000 46 'point symmetry operation' ? ? 0.80901699 -0.46708618 -0.35682209 0.00000 0.11026409 -0.47568366 0.87267800 0.00000 -0.57735027 -0.74535599 -0.33333333 0.00000 47 'point symmetry operation' ? ? 0.30901699 0.17841104 -0.93417236 0.00000 0.17841104 -0.97568366 -0.12732200 0.00000 -0.93417236 -0.12732200 -0.33333333 0.00000 48 'point symmetry operation' ? ? 0.00000000 0.93417236 -0.35682209 0.00000 -0.35682209 -0.33333333 -0.87267800 0.00000 -0.93417236 0.12732200 0.33333333 0.00000 49 'point symmetry operation' ? ? 0.30901699 0.75576131 0.57735027 0.00000 -0.75576131 0.56366100 -0.33333333 0.00000 -0.57735027 -0.33333333 0.74535599 0.00000 50 'point symmetry operation' ? ? 0.80901699 -0.11026409 0.57735027 0.00000 -0.46708618 0.47568366 0.74535599 0.00000 -0.35682209 -0.87267800 0.33333333 0.00000 51 'point symmetry operation' ? ? 0.00000000 -0.93417236 0.35682209 0.00000 0.35682209 -0.33333333 -0.87267800 0.00000 0.93417236 0.12732200 0.33333333 0.00000 52 'point symmetry operation' ? ? -0.30901699 -0.75576131 -0.57735027 0.00000 -0.17841104 0.64235033 -0.74535599 0.00000 0.93417236 -0.12732200 -0.33333333 0.00000 53 'point symmetry operation' ? ? -0.80901699 0.11026409 -0.57735027 0.00000 -0.11026409 0.93633900 0.33333333 0.00000 0.57735027 0.33333333 -0.74535599 0.00000 54 'point symmetry operation' ? ? -0.80901699 0.46708618 0.35682209 0.00000 0.46708618 0.14235033 0.87267800 0.00000 0.35682209 0.87267800 -0.33333333 0.00000 55 'point symmetry operation' ? ? -0.30901699 -0.17841104 0.93417236 0.00000 0.75576131 -0.64235033 0.12732200 0.00000 0.57735027 0.74535599 0.33333333 0.00000 56 'point symmetry operation' ? ? -0.50000000 0.64549722 -0.57735027 0.00000 -0.64549722 0.16666667 0.74535599 0.00000 0.57735027 0.74535599 0.33333333 0.00000 57 'point symmetry operation' ? ? -0.30901699 0.75576131 0.57735027 0.00000 -0.17841104 -0.64235033 0.74535599 0.00000 0.93417236 0.12732200 0.33333333 0.00000 58 'point symmetry operation' ? ? 0.30901699 -0.17841104 0.93417236 0.00000 -0.17841104 -0.97568366 -0.12732200 0.00000 0.93417236 -0.12732200 -0.33333333 0.00000 59 'point symmetry operation' ? ? 0.50000000 -0.86602540 0.00000000 0.00000 -0.64549722 -0.37267800 -0.66666667 0.00000 0.57735027 0.33333333 -0.74535599 0.00000 60 'point symmetry operation' ? ? 0.00000000 -0.35682209 -0.93417236 0.00000 -0.93417236 0.33333333 -0.12732200 0.00000 0.35682209 0.87267800 -0.33333333 0.00000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 25 ? VAL A 29 ? PHE A 25 VAL A 29 5 ? 5 HELX_P HELX_P2 2 THR A 97 ? LYS A 113 ? THR A 97 LYS A 113 1 ? 17 HELX_P HELX_P3 3 ASN A 116 ? ALA A 124 ? ASN A 116 ALA A 124 1 ? 9 HELX_P HELX_P4 4 PHE B 25 ? VAL B 29 ? PHE B 25 VAL B 29 5 ? 5 HELX_P HELX_P5 5 PRO B 78 ? ALA B 81 ? PRO B 78 ALA B 81 5 ? 4 HELX_P HELX_P6 6 THR B 97 ? LYS B 113 ? THR B 97 LYS B 113 1 ? 17 HELX_P HELX_P7 7 ASN B 116 ? ALA B 124 ? ASN B 116 ALA B 124 1 ? 9 HELX_P HELX_P8 8 SER C 37 ? ALA C 41 ? SER C 37 ALA C 41 5 ? 5 HELX_P HELX_P9 9 THR C 97 ? LYS C 113 ? THR C 97 LYS C 113 1 ? 17 HELX_P HELX_P10 10 ASN C 116 ? ALA C 124 ? ASN C 116 ALA C 124 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D U 10 "O3'" ? ? ? 1_555 D 5BU 11 P ? ? R U 10 R 5BU 11 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? D 5BU 11 "O3'" ? ? ? 1_555 D A 12 P ? ? R 5BU 11 R A 12 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? E U 10 "O3'" ? ? ? 1_555 E 5BU 11 P ? ? S U 10 S 5BU 11 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale4 covale both ? E 5BU 11 "O3'" ? ? ? 1_555 E A 12 P ? ? S 5BU 11 S A 12 1_555 ? ? ? ? ? ? ? 1.606 ? ? hydrog1 hydrog ? ? D C 2 N3 ? ? ? 1_555 D G 18 N1 ? ? R C 2 R G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D C 2 N4 ? ? ? 1_555 D G 18 O6 ? ? R C 2 R G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D C 2 O2 ? ? ? 1_555 D G 18 N2 ? ? R C 2 R G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D A 3 N1 ? ? ? 1_555 D U 17 N3 ? ? R A 3 R U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D A 3 N6 ? ? ? 1_555 D U 17 O4 ? ? R A 3 R U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D U 4 N3 ? ? ? 1_555 D A 16 N1 ? ? R U 4 R A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D U 4 O4 ? ? ? 1_555 D A 16 N6 ? ? R U 4 R A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D G 5 N1 ? ? ? 1_555 D C 15 N3 ? ? R G 5 R C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D G 5 N2 ? ? ? 1_555 D C 15 O2 ? ? R G 5 R C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D G 5 O6 ? ? ? 1_555 D C 15 N4 ? ? R G 5 R C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D G 7 N1 ? ? ? 1_555 D C 14 N3 ? ? R G 7 R C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D G 7 N2 ? ? ? 1_555 D C 14 O2 ? ? R G 7 R C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D G 7 O6 ? ? ? 1_555 D C 14 N4 ? ? R G 7 R C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D G 8 N1 ? ? ? 1_555 D C 13 N3 ? ? R G 8 R C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D G 8 N2 ? ? ? 1_555 D C 13 O2 ? ? R G 8 R C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D G 8 O6 ? ? ? 1_555 D C 13 N4 ? ? R G 8 R C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? E C 2 N3 ? ? ? 1_555 E G 18 N1 ? ? S C 2 S G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? E C 2 N4 ? ? ? 1_555 E G 18 O6 ? ? S C 2 S G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? E C 2 O2 ? ? ? 1_555 E G 18 N2 ? ? S C 2 S G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? E A 3 N1 ? ? ? 1_555 E U 17 N3 ? ? S A 3 S U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? E A 3 N6 ? ? ? 1_555 E U 17 O4 ? ? S A 3 S U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? E U 4 N3 ? ? ? 1_555 E A 16 N1 ? ? S U 4 S A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? E U 4 O4 ? ? ? 1_555 E A 16 N6 ? ? S U 4 S A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E G 5 N1 ? ? ? 1_555 E C 15 N3 ? ? S G 5 S C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? E G 5 N2 ? ? ? 1_555 E C 15 O2 ? ? S G 5 S C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? E G 5 O6 ? ? ? 1_555 E C 15 N4 ? ? S G 5 S C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E G 7 N1 ? ? ? 1_555 E C 14 N3 ? ? S G 7 S C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E G 7 N2 ? ? ? 1_555 E C 14 O2 ? ? S G 7 S C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E G 7 O6 ? ? ? 1_555 E C 14 N4 ? ? S G 7 S C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E G 8 N1 ? ? ? 1_555 E C 13 N3 ? ? S G 8 S C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E G 8 N2 ? ? ? 1_555 E C 13 O2 ? ? S G 8 S C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E G 8 O6 ? ? ? 1_555 E C 13 N4 ? ? S G 8 S C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 77 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 77 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 78 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 78 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 12 ? CA ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? anti-parallel AA 8 9 ? anti-parallel AA 9 10 ? anti-parallel AA 10 11 ? anti-parallel AA 11 12 ? anti-parallel CA 1 2 ? anti-parallel CA 2 3 ? anti-parallel CA 3 4 ? anti-parallel CA 4 5 ? anti-parallel CA 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PHE A 7 ? VAL A 10 ? PHE A 7 VAL A 10 AA 2 VAL A 18 ? ASN A 24 ? VAL A 18 ASN A 24 AA 3 ALA A 30 ? ILE A 33 ? ALA A 30 ILE A 33 AA 4 LYS A 43 ? ARG A 49 ? LYS A 43 ARG A 49 AA 5 ASN A 55 ? VAL A 72 ? ASN A 55 VAL A 72 AA 6 VAL A 75 ? PRO A 93 ? VAL A 75 PRO A 93 AA 7 ARG B 83 ? PRO B 93 ? ARG B 83 PRO B 93 AA 8 ASN B 55 ? PRO B 65 ? ASN B 55 PRO B 65 AA 9 LYS B 43 ? ARG B 49 ? LYS B 43 ARG B 49 AA 10 ALA B 30 ? ILE B 33 ? ALA B 30 ILE B 33 AA 11 VAL B 18 ? ASN B 24 ? VAL B 18 ASN B 24 AA 12 PHE B 7 ? VAL B 10 ? PHE B 7 VAL B 10 CA 1 PHE C 7 ? VAL C 10 ? PHE C 7 VAL C 10 CA 2 VAL C 18 ? ALA C 26 ? VAL C 18 ALA C 26 CA 3 VAL C 29 ? SER C 34 ? VAL C 29 SER C 34 CA 4 LYS C 43 ? GLN C 50 ? LYS C 43 GLN C 50 CA 5 ASN C 55 ? VAL C 72 ? ASN C 55 VAL C 72 CA 6 VAL C 75 ? PRO C 93 ? VAL C 75 PRO C 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 9 ? N LEU A 9 O VAL A 18 ? O VAL A 18 AA 2 3 N SER A 23 ? N SER A 23 O GLU A 31 ? O GLU A 31 AA 3 4 N TRP A 32 ? N TRP A 32 O VAL A 44 ? O VAL A 44 AA 4 5 N ARG A 49 ? N ARG A 49 O LYS A 57 ? O LYS A 57 AA 5 6 N VAL A 72 ? N VAL A 72 O VAL A 75 ? O VAL A 75 AA 6 7 N THR A 91 ? N THR A 91 O TYR B 85 ? O TYR B 85 AA 7 8 N ILE B 92 ? N ILE B 92 O ARG B 56 ? O ARG B 56 AA 8 9 N GLU B 63 ? N GLU B 63 O LYS B 43 ? O LYS B 43 AA 9 10 N CYS B 46 ? N CYS B 46 O ALA B 30 ? O ALA B 30 AA 10 11 N ILE B 33 ? N ILE B 33 O ALA B 21 ? O ALA B 21 AA 11 12 N VAL B 20 ? N VAL B 20 O PHE B 7 ? O PHE B 7 CA 1 2 N LEU C 9 ? N LEU C 9 O VAL C 18 ? O VAL C 18 CA 2 3 N ALA C 26 ? N ALA C 26 O VAL C 29 ? O VAL C 29 CA 3 4 N TRP C 32 ? N TRP C 32 O VAL C 44 ? O VAL C 44 CA 4 5 N ARG C 49 ? N ARG C 49 O LYS C 57 ? O LYS C 57 CA 5 6 N VAL C 72 ? N VAL C 72 O VAL C 75 ? O VAL C 75 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 S _pdbx_validate_rmsd_bond.auth_comp_id_1 C _pdbx_validate_rmsd_bond.auth_seq_id_1 2 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 S _pdbx_validate_rmsd_bond.auth_comp_id_2 C _pdbx_validate_rmsd_bond.auth_seq_id_2 2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.530 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.077 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_1 S _pdbx_validate_rmsd_angle.auth_comp_id_1 C _pdbx_validate_rmsd_angle.auth_seq_id_1 2 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_2 S _pdbx_validate_rmsd_angle.auth_comp_id_2 C _pdbx_validate_rmsd_angle.auth_seq_id_2 2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_3 S _pdbx_validate_rmsd_angle.auth_comp_id_3 C _pdbx_validate_rmsd_angle.auth_seq_id_3 2 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.75 _pdbx_validate_rmsd_angle.angle_target_value 113.70 _pdbx_validate_rmsd_angle.angle_deviation 10.05 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? 167.54 124.11 2 1 ASN A 24 ? ? -176.44 149.51 3 1 PHE B 25 ? ? -140.88 18.65 4 1 ASN C 12 ? ? -107.62 45.30 5 1 SER C 23 ? ? -136.20 -43.67 6 1 PHE C 25 ? ? -144.89 54.13 7 1 ASN C 36 ? ? 73.80 -164.06 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C3'" ? R C 2 ? 'WRONG HAND' . 2 1 "C3'" ? S C 2 ? 'WRONG HAND' . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 D 5BU 11 R 5BU 11 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" 2 E 5BU 11 S 5BU 11 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" # _pdbx_point_symmetry.entry_id 2BU1 _pdbx_point_symmetry.Schoenflies_symbol I # _pdbx_entry_details.entry_id 2BU1 _pdbx_entry_details.compound_details 'FORMS THE PHAGE SHELL AND BINDS TO THE PHAGE RNA' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id C _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2023 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.85 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 R A 1 ? D A 1 2 1 Y 1 R U 19 ? D U 19 3 1 Y 1 S A 1 ? E A 1 4 1 Y 1 S U 19 ? E U 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5BU P P N N 1 5BU OP1 O N N 2 5BU OP2 O N N 3 5BU OP3 O N N 4 5BU "O5'" O N N 5 5BU "C5'" C N N 6 5BU "C4'" C N R 7 5BU "O4'" O N N 8 5BU "C3'" C N S 9 5BU "O3'" O N N 10 5BU "C2'" C N R 11 5BU "O2'" O N N 12 5BU "C1'" C N R 13 5BU N1 N N N 14 5BU C2 C N N 15 5BU O2 O N N 16 5BU N3 N N N 17 5BU C4 C N N 18 5BU O4 O N N 19 5BU C5 C N N 20 5BU C6 C N N 21 5BU BR BR N N 22 5BU HOP2 H N N 23 5BU HOP3 H N N 24 5BU "H5'" H N N 25 5BU "H5''" H N N 26 5BU "H4'" H N N 27 5BU "H3'" H N N 28 5BU "HO3'" H N N 29 5BU "H2'" H N N 30 5BU "HO2'" H N N 31 5BU "H1'" H N N 32 5BU H3 H N N 33 5BU H6 H N N 34 A OP3 O N N 35 A P P N N 36 A OP1 O N N 37 A OP2 O N N 38 A "O5'" O N N 39 A "C5'" C N N 40 A "C4'" C N R 41 A "O4'" O N N 42 A "C3'" C N S 43 A "O3'" O N N 44 A "C2'" C N R 45 A "O2'" O N N 46 A "C1'" C N R 47 A N9 N Y N 48 A C8 C Y N 49 A N7 N Y N 50 A C5 C Y N 51 A C6 C Y N 52 A N6 N N N 53 A N1 N Y N 54 A C2 C Y N 55 A N3 N Y N 56 A C4 C Y N 57 A HOP3 H N N 58 A HOP2 H N N 59 A "H5'" H N N 60 A "H5''" H N N 61 A "H4'" H N N 62 A "H3'" H N N 63 A "HO3'" H N N 64 A "H2'" H N N 65 A "HO2'" H N N 66 A "H1'" H N N 67 A H8 H N N 68 A H61 H N N 69 A H62 H N N 70 A H2 H N N 71 ALA N N N N 72 ALA CA C N S 73 ALA C C N N 74 ALA O O N N 75 ALA CB C N N 76 ALA OXT O N N 77 ALA H H N N 78 ALA H2 H N N 79 ALA HA H N N 80 ALA HB1 H N N 81 ALA HB2 H N N 82 ALA HB3 H N N 83 ALA HXT H N N 84 ARG N N N N 85 ARG CA C N S 86 ARG C C N N 87 ARG O O N N 88 ARG CB C N N 89 ARG CG C N N 90 ARG CD C N N 91 ARG NE N N N 92 ARG CZ C N N 93 ARG NH1 N N N 94 ARG NH2 N N N 95 ARG OXT O N N 96 ARG H H N N 97 ARG H2 H N N 98 ARG HA H N N 99 ARG HB2 H N N 100 ARG HB3 H N N 101 ARG HG2 H N N 102 ARG HG3 H N N 103 ARG HD2 H N N 104 ARG HD3 H N N 105 ARG HE H N N 106 ARG HH11 H N N 107 ARG HH12 H N N 108 ARG HH21 H N N 109 ARG HH22 H N N 110 ARG HXT H N N 111 ASN N N N N 112 ASN CA C N S 113 ASN C C N N 114 ASN O O N N 115 ASN CB C N N 116 ASN CG C N N 117 ASN OD1 O N N 118 ASN ND2 N N N 119 ASN OXT O N N 120 ASN H H N N 121 ASN H2 H N N 122 ASN HA H N N 123 ASN HB2 H N N 124 ASN HB3 H N N 125 ASN HD21 H N N 126 ASN HD22 H N N 127 ASN HXT H N N 128 ASP N N N N 129 ASP CA C N S 130 ASP C C N N 131 ASP O O N N 132 ASP CB C N N 133 ASP CG C N N 134 ASP OD1 O N N 135 ASP OD2 O N N 136 ASP OXT O N N 137 ASP H H N N 138 ASP H2 H N N 139 ASP HA H N N 140 ASP HB2 H N N 141 ASP HB3 H N N 142 ASP HD2 H N N 143 ASP HXT H N N 144 C OP3 O N N 145 C P P N N 146 C OP1 O N N 147 C OP2 O N N 148 C "O5'" O N N 149 C "C5'" C N N 150 C "C4'" C N R 151 C "O4'" O N N 152 C "C3'" C N S 153 C "O3'" O N N 154 C "C2'" C N R 155 C "O2'" O N N 156 C "C1'" C N R 157 C N1 N N N 158 C C2 C N N 159 C O2 O N N 160 C N3 N N N 161 C C4 C N N 162 C N4 N N N 163 C C5 C N N 164 C C6 C N N 165 C HOP3 H N N 166 C HOP2 H N N 167 C "H5'" H N N 168 C "H5''" H N N 169 C "H4'" H N N 170 C "H3'" H N N 171 C "HO3'" H N N 172 C "H2'" H N N 173 C "HO2'" H N N 174 C "H1'" H N N 175 C H41 H N N 176 C H42 H N N 177 C H5 H N N 178 C H6 H N N 179 CYS N N N N 180 CYS CA C N R 181 CYS C C N N 182 CYS O O N N 183 CYS CB C N N 184 CYS SG S N N 185 CYS OXT O N N 186 CYS H H N N 187 CYS H2 H N N 188 CYS HA H N N 189 CYS HB2 H N N 190 CYS HB3 H N N 191 CYS HG H N N 192 CYS HXT H N N 193 G OP3 O N N 194 G P P N N 195 G OP1 O N N 196 G OP2 O N N 197 G "O5'" O N N 198 G "C5'" C N N 199 G "C4'" C N R 200 G "O4'" O N N 201 G "C3'" C N S 202 G "O3'" O N N 203 G "C2'" C N R 204 G "O2'" O N N 205 G "C1'" C N R 206 G N9 N Y N 207 G C8 C Y N 208 G N7 N Y N 209 G C5 C Y N 210 G C6 C N N 211 G O6 O N N 212 G N1 N N N 213 G C2 C N N 214 G N2 N N N 215 G N3 N N N 216 G C4 C Y N 217 G HOP3 H N N 218 G HOP2 H N N 219 G "H5'" H N N 220 G "H5''" H N N 221 G "H4'" H N N 222 G "H3'" H N N 223 G "HO3'" H N N 224 G "H2'" H N N 225 G "HO2'" H N N 226 G "H1'" H N N 227 G H8 H N N 228 G H1 H N N 229 G H21 H N N 230 G H22 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HOH O O N N 281 HOH H1 H N N 282 HOH H2 H N N 283 ILE N N N N 284 ILE CA C N S 285 ILE C C N N 286 ILE O O N N 287 ILE CB C N S 288 ILE CG1 C N N 289 ILE CG2 C N N 290 ILE CD1 C N N 291 ILE OXT O N N 292 ILE H H N N 293 ILE H2 H N N 294 ILE HA H N N 295 ILE HB H N N 296 ILE HG12 H N N 297 ILE HG13 H N N 298 ILE HG21 H N N 299 ILE HG22 H N N 300 ILE HG23 H N N 301 ILE HD11 H N N 302 ILE HD12 H N N 303 ILE HD13 H N N 304 ILE HXT H N N 305 LEU N N N N 306 LEU CA C N S 307 LEU C C N N 308 LEU O O N N 309 LEU CB C N N 310 LEU CG C N N 311 LEU CD1 C N N 312 LEU CD2 C N N 313 LEU OXT O N N 314 LEU H H N N 315 LEU H2 H N N 316 LEU HA H N N 317 LEU HB2 H N N 318 LEU HB3 H N N 319 LEU HG H N N 320 LEU HD11 H N N 321 LEU HD12 H N N 322 LEU HD13 H N N 323 LEU HD21 H N N 324 LEU HD22 H N N 325 LEU HD23 H N N 326 LEU HXT H N N 327 LYS N N N N 328 LYS CA C N S 329 LYS C C N N 330 LYS O O N N 331 LYS CB C N N 332 LYS CG C N N 333 LYS CD C N N 334 LYS CE C N N 335 LYS NZ N N N 336 LYS OXT O N N 337 LYS H H N N 338 LYS H2 H N N 339 LYS HA H N N 340 LYS HB2 H N N 341 LYS HB3 H N N 342 LYS HG2 H N N 343 LYS HG3 H N N 344 LYS HD2 H N N 345 LYS HD3 H N N 346 LYS HE2 H N N 347 LYS HE3 H N N 348 LYS HZ1 H N N 349 LYS HZ2 H N N 350 LYS HZ3 H N N 351 LYS HXT H N N 352 MET N N N N 353 MET CA C N S 354 MET C C N N 355 MET O O N N 356 MET CB C N N 357 MET CG C N N 358 MET SD S N N 359 MET CE C N N 360 MET OXT O N N 361 MET H H N N 362 MET H2 H N N 363 MET HA H N N 364 MET HB2 H N N 365 MET HB3 H N N 366 MET HG2 H N N 367 MET HG3 H N N 368 MET HE1 H N N 369 MET HE2 H N N 370 MET HE3 H N N 371 MET HXT H N N 372 PHE N N N N 373 PHE CA C N S 374 PHE C C N N 375 PHE O O N N 376 PHE CB C N N 377 PHE CG C Y N 378 PHE CD1 C Y N 379 PHE CD2 C Y N 380 PHE CE1 C Y N 381 PHE CE2 C Y N 382 PHE CZ C Y N 383 PHE OXT O N N 384 PHE H H N N 385 PHE H2 H N N 386 PHE HA H N N 387 PHE HB2 H N N 388 PHE HB3 H N N 389 PHE HD1 H N N 390 PHE HD2 H N N 391 PHE HE1 H N N 392 PHE HE2 H N N 393 PHE HZ H N N 394 PHE HXT H N N 395 PRO N N N N 396 PRO CA C N S 397 PRO C C N N 398 PRO O O N N 399 PRO CB C N N 400 PRO CG C N N 401 PRO CD C N N 402 PRO OXT O N N 403 PRO H H N N 404 PRO HA H N N 405 PRO HB2 H N N 406 PRO HB3 H N N 407 PRO HG2 H N N 408 PRO HG3 H N N 409 PRO HD2 H N N 410 PRO HD3 H N N 411 PRO HXT H N N 412 SER N N N N 413 SER CA C N S 414 SER C C N N 415 SER O O N N 416 SER CB C N N 417 SER OG O N N 418 SER OXT O N N 419 SER H H N N 420 SER H2 H N N 421 SER HA H N N 422 SER HB2 H N N 423 SER HB3 H N N 424 SER HG H N N 425 SER HXT H N N 426 THR N N N N 427 THR CA C N S 428 THR C C N N 429 THR O O N N 430 THR CB C N R 431 THR OG1 O N N 432 THR CG2 C N N 433 THR OXT O N N 434 THR H H N N 435 THR H2 H N N 436 THR HA H N N 437 THR HB H N N 438 THR HG1 H N N 439 THR HG21 H N N 440 THR HG22 H N N 441 THR HG23 H N N 442 THR HXT H N N 443 TRP N N N N 444 TRP CA C N S 445 TRP C C N N 446 TRP O O N N 447 TRP CB C N N 448 TRP CG C Y N 449 TRP CD1 C Y N 450 TRP CD2 C Y N 451 TRP NE1 N Y N 452 TRP CE2 C Y N 453 TRP CE3 C Y N 454 TRP CZ2 C Y N 455 TRP CZ3 C Y N 456 TRP CH2 C Y N 457 TRP OXT O N N 458 TRP H H N N 459 TRP H2 H N N 460 TRP HA H N N 461 TRP HB2 H N N 462 TRP HB3 H N N 463 TRP HD1 H N N 464 TRP HE1 H N N 465 TRP HE3 H N N 466 TRP HZ2 H N N 467 TRP HZ3 H N N 468 TRP HH2 H N N 469 TRP HXT H N N 470 TYR N N N N 471 TYR CA C N S 472 TYR C C N N 473 TYR O O N N 474 TYR CB C N N 475 TYR CG C Y N 476 TYR CD1 C Y N 477 TYR CD2 C Y N 478 TYR CE1 C Y N 479 TYR CE2 C Y N 480 TYR CZ C Y N 481 TYR OH O N N 482 TYR OXT O N N 483 TYR H H N N 484 TYR H2 H N N 485 TYR HA H N N 486 TYR HB2 H N N 487 TYR HB3 H N N 488 TYR HD1 H N N 489 TYR HD2 H N N 490 TYR HE1 H N N 491 TYR HE2 H N N 492 TYR HH H N N 493 TYR HXT H N N 494 U OP3 O N N 495 U P P N N 496 U OP1 O N N 497 U OP2 O N N 498 U "O5'" O N N 499 U "C5'" C N N 500 U "C4'" C N R 501 U "O4'" O N N 502 U "C3'" C N S 503 U "O3'" O N N 504 U "C2'" C N R 505 U "O2'" O N N 506 U "C1'" C N R 507 U N1 N N N 508 U C2 C N N 509 U O2 O N N 510 U N3 N N N 511 U C4 C N N 512 U O4 O N N 513 U C5 C N N 514 U C6 C N N 515 U HOP3 H N N 516 U HOP2 H N N 517 U "H5'" H N N 518 U "H5''" H N N 519 U "H4'" H N N 520 U "H3'" H N N 521 U "HO3'" H N N 522 U "H2'" H N N 523 U "HO2'" H N N 524 U "H1'" H N N 525 U H3 H N N 526 U H5 H N N 527 U H6 H N N 528 VAL N N N N 529 VAL CA C N S 530 VAL C C N N 531 VAL O O N N 532 VAL CB C N N 533 VAL CG1 C N N 534 VAL CG2 C N N 535 VAL OXT O N N 536 VAL H H N N 537 VAL H2 H N N 538 VAL HA H N N 539 VAL HB H N N 540 VAL HG11 H N N 541 VAL HG12 H N N 542 VAL HG13 H N N 543 VAL HG21 H N N 544 VAL HG22 H N N 545 VAL HG23 H N N 546 VAL HXT H N N 547 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5BU P OP1 doub N N 1 5BU P OP2 sing N N 2 5BU P OP3 sing N N 3 5BU P "O5'" sing N N 4 5BU OP2 HOP2 sing N N 5 5BU OP3 HOP3 sing N N 6 5BU "O5'" "C5'" sing N N 7 5BU "C5'" "C4'" sing N N 8 5BU "C5'" "H5'" sing N N 9 5BU "C5'" "H5''" sing N N 10 5BU "C4'" "O4'" sing N N 11 5BU "C4'" "C3'" sing N N 12 5BU "C4'" "H4'" sing N N 13 5BU "O4'" "C1'" sing N N 14 5BU "C3'" "O3'" sing N N 15 5BU "C3'" "C2'" sing N N 16 5BU "C3'" "H3'" sing N N 17 5BU "O3'" "HO3'" sing N N 18 5BU "C2'" "O2'" sing N N 19 5BU "C2'" "C1'" sing N N 20 5BU "C2'" "H2'" sing N N 21 5BU "O2'" "HO2'" sing N N 22 5BU "C1'" N1 sing N N 23 5BU "C1'" "H1'" sing N N 24 5BU N1 C2 sing N N 25 5BU N1 C6 sing N N 26 5BU C2 O2 doub N N 27 5BU C2 N3 sing N N 28 5BU N3 C4 sing N N 29 5BU N3 H3 sing N N 30 5BU C4 O4 doub N N 31 5BU C4 C5 sing N N 32 5BU C5 C6 doub N N 33 5BU C5 BR sing N N 34 5BU C6 H6 sing N N 35 A OP3 P sing N N 36 A OP3 HOP3 sing N N 37 A P OP1 doub N N 38 A P OP2 sing N N 39 A P "O5'" sing N N 40 A OP2 HOP2 sing N N 41 A "O5'" "C5'" sing N N 42 A "C5'" "C4'" sing N N 43 A "C5'" "H5'" sing N N 44 A "C5'" "H5''" sing N N 45 A "C4'" "O4'" sing N N 46 A "C4'" "C3'" sing N N 47 A "C4'" "H4'" sing N N 48 A "O4'" "C1'" sing N N 49 A "C3'" "O3'" sing N N 50 A "C3'" "C2'" sing N N 51 A "C3'" "H3'" sing N N 52 A "O3'" "HO3'" sing N N 53 A "C2'" "O2'" sing N N 54 A "C2'" "C1'" sing N N 55 A "C2'" "H2'" sing N N 56 A "O2'" "HO2'" sing N N 57 A "C1'" N9 sing N N 58 A "C1'" "H1'" sing N N 59 A N9 C8 sing Y N 60 A N9 C4 sing Y N 61 A C8 N7 doub Y N 62 A C8 H8 sing N N 63 A N7 C5 sing Y N 64 A C5 C6 sing Y N 65 A C5 C4 doub Y N 66 A C6 N6 sing N N 67 A C6 N1 doub Y N 68 A N6 H61 sing N N 69 A N6 H62 sing N N 70 A N1 C2 sing Y N 71 A C2 N3 doub Y N 72 A C2 H2 sing N N 73 A N3 C4 sing Y N 74 ALA N CA sing N N 75 ALA N H sing N N 76 ALA N H2 sing N N 77 ALA CA C sing N N 78 ALA CA CB sing N N 79 ALA CA HA sing N N 80 ALA C O doub N N 81 ALA C OXT sing N N 82 ALA CB HB1 sing N N 83 ALA CB HB2 sing N N 84 ALA CB HB3 sing N N 85 ALA OXT HXT sing N N 86 ARG N CA sing N N 87 ARG N H sing N N 88 ARG N H2 sing N N 89 ARG CA C sing N N 90 ARG CA CB sing N N 91 ARG CA HA sing N N 92 ARG C O doub N N 93 ARG C OXT sing N N 94 ARG CB CG sing N N 95 ARG CB HB2 sing N N 96 ARG CB HB3 sing N N 97 ARG CG CD sing N N 98 ARG CG HG2 sing N N 99 ARG CG HG3 sing N N 100 ARG CD NE sing N N 101 ARG CD HD2 sing N N 102 ARG CD HD3 sing N N 103 ARG NE CZ sing N N 104 ARG NE HE sing N N 105 ARG CZ NH1 sing N N 106 ARG CZ NH2 doub N N 107 ARG NH1 HH11 sing N N 108 ARG NH1 HH12 sing N N 109 ARG NH2 HH21 sing N N 110 ARG NH2 HH22 sing N N 111 ARG OXT HXT sing N N 112 ASN N CA sing N N 113 ASN N H sing N N 114 ASN N H2 sing N N 115 ASN CA C sing N N 116 ASN CA CB sing N N 117 ASN CA HA sing N N 118 ASN C O doub N N 119 ASN C OXT sing N N 120 ASN CB CG sing N N 121 ASN CB HB2 sing N N 122 ASN CB HB3 sing N N 123 ASN CG OD1 doub N N 124 ASN CG ND2 sing N N 125 ASN ND2 HD21 sing N N 126 ASN ND2 HD22 sing N N 127 ASN OXT HXT sing N N 128 ASP N CA sing N N 129 ASP N H sing N N 130 ASP N H2 sing N N 131 ASP CA C sing N N 132 ASP CA CB sing N N 133 ASP CA HA sing N N 134 ASP C O doub N N 135 ASP C OXT sing N N 136 ASP CB CG sing N N 137 ASP CB HB2 sing N N 138 ASP CB HB3 sing N N 139 ASP CG OD1 doub N N 140 ASP CG OD2 sing N N 141 ASP OD2 HD2 sing N N 142 ASP OXT HXT sing N N 143 C OP3 P sing N N 144 C OP3 HOP3 sing N N 145 C P OP1 doub N N 146 C P OP2 sing N N 147 C P "O5'" sing N N 148 C OP2 HOP2 sing N N 149 C "O5'" "C5'" sing N N 150 C "C5'" "C4'" sing N N 151 C "C5'" "H5'" sing N N 152 C "C5'" "H5''" sing N N 153 C "C4'" "O4'" sing N N 154 C "C4'" "C3'" sing N N 155 C "C4'" "H4'" sing N N 156 C "O4'" "C1'" sing N N 157 C "C3'" "O3'" sing N N 158 C "C3'" "C2'" sing N N 159 C "C3'" "H3'" sing N N 160 C "O3'" "HO3'" sing N N 161 C "C2'" "O2'" sing N N 162 C "C2'" "C1'" sing N N 163 C "C2'" "H2'" sing N N 164 C "O2'" "HO2'" sing N N 165 C "C1'" N1 sing N N 166 C "C1'" "H1'" sing N N 167 C N1 C2 sing N N 168 C N1 C6 sing N N 169 C C2 O2 doub N N 170 C C2 N3 sing N N 171 C N3 C4 doub N N 172 C C4 N4 sing N N 173 C C4 C5 sing N N 174 C N4 H41 sing N N 175 C N4 H42 sing N N 176 C C5 C6 doub N N 177 C C5 H5 sing N N 178 C C6 H6 sing N N 179 CYS N CA sing N N 180 CYS N H sing N N 181 CYS N H2 sing N N 182 CYS CA C sing N N 183 CYS CA CB sing N N 184 CYS CA HA sing N N 185 CYS C O doub N N 186 CYS C OXT sing N N 187 CYS CB SG sing N N 188 CYS CB HB2 sing N N 189 CYS CB HB3 sing N N 190 CYS SG HG sing N N 191 CYS OXT HXT sing N N 192 G OP3 P sing N N 193 G OP3 HOP3 sing N N 194 G P OP1 doub N N 195 G P OP2 sing N N 196 G P "O5'" sing N N 197 G OP2 HOP2 sing N N 198 G "O5'" "C5'" sing N N 199 G "C5'" "C4'" sing N N 200 G "C5'" "H5'" sing N N 201 G "C5'" "H5''" sing N N 202 G "C4'" "O4'" sing N N 203 G "C4'" "C3'" sing N N 204 G "C4'" "H4'" sing N N 205 G "O4'" "C1'" sing N N 206 G "C3'" "O3'" sing N N 207 G "C3'" "C2'" sing N N 208 G "C3'" "H3'" sing N N 209 G "O3'" "HO3'" sing N N 210 G "C2'" "O2'" sing N N 211 G "C2'" "C1'" sing N N 212 G "C2'" "H2'" sing N N 213 G "O2'" "HO2'" sing N N 214 G "C1'" N9 sing N N 215 G "C1'" "H1'" sing N N 216 G N9 C8 sing Y N 217 G N9 C4 sing Y N 218 G C8 N7 doub Y N 219 G C8 H8 sing N N 220 G N7 C5 sing Y N 221 G C5 C6 sing N N 222 G C5 C4 doub Y N 223 G C6 O6 doub N N 224 G C6 N1 sing N N 225 G N1 C2 sing N N 226 G N1 H1 sing N N 227 G C2 N2 sing N N 228 G C2 N3 doub N N 229 G N2 H21 sing N N 230 G N2 H22 sing N N 231 G N3 C4 sing N N 232 GLN N CA sing N N 233 GLN N H sing N N 234 GLN N H2 sing N N 235 GLN CA C sing N N 236 GLN CA CB sing N N 237 GLN CA HA sing N N 238 GLN C O doub N N 239 GLN C OXT sing N N 240 GLN CB CG sing N N 241 GLN CB HB2 sing N N 242 GLN CB HB3 sing N N 243 GLN CG CD sing N N 244 GLN CG HG2 sing N N 245 GLN CG HG3 sing N N 246 GLN CD OE1 doub N N 247 GLN CD NE2 sing N N 248 GLN NE2 HE21 sing N N 249 GLN NE2 HE22 sing N N 250 GLN OXT HXT sing N N 251 GLU N CA sing N N 252 GLU N H sing N N 253 GLU N H2 sing N N 254 GLU CA C sing N N 255 GLU CA CB sing N N 256 GLU CA HA sing N N 257 GLU C O doub N N 258 GLU C OXT sing N N 259 GLU CB CG sing N N 260 GLU CB HB2 sing N N 261 GLU CB HB3 sing N N 262 GLU CG CD sing N N 263 GLU CG HG2 sing N N 264 GLU CG HG3 sing N N 265 GLU CD OE1 doub N N 266 GLU CD OE2 sing N N 267 GLU OE2 HE2 sing N N 268 GLU OXT HXT sing N N 269 GLY N CA sing N N 270 GLY N H sing N N 271 GLY N H2 sing N N 272 GLY CA C sing N N 273 GLY CA HA2 sing N N 274 GLY CA HA3 sing N N 275 GLY C O doub N N 276 GLY C OXT sing N N 277 GLY OXT HXT sing N N 278 HOH O H1 sing N N 279 HOH O H2 sing N N 280 ILE N CA sing N N 281 ILE N H sing N N 282 ILE N H2 sing N N 283 ILE CA C sing N N 284 ILE CA CB sing N N 285 ILE CA HA sing N N 286 ILE C O doub N N 287 ILE C OXT sing N N 288 ILE CB CG1 sing N N 289 ILE CB CG2 sing N N 290 ILE CB HB sing N N 291 ILE CG1 CD1 sing N N 292 ILE CG1 HG12 sing N N 293 ILE CG1 HG13 sing N N 294 ILE CG2 HG21 sing N N 295 ILE CG2 HG22 sing N N 296 ILE CG2 HG23 sing N N 297 ILE CD1 HD11 sing N N 298 ILE CD1 HD12 sing N N 299 ILE CD1 HD13 sing N N 300 ILE OXT HXT sing N N 301 LEU N CA sing N N 302 LEU N H sing N N 303 LEU N H2 sing N N 304 LEU CA C sing N N 305 LEU CA CB sing N N 306 LEU CA HA sing N N 307 LEU C O doub N N 308 LEU C OXT sing N N 309 LEU CB CG sing N N 310 LEU CB HB2 sing N N 311 LEU CB HB3 sing N N 312 LEU CG CD1 sing N N 313 LEU CG CD2 sing N N 314 LEU CG HG sing N N 315 LEU CD1 HD11 sing N N 316 LEU CD1 HD12 sing N N 317 LEU CD1 HD13 sing N N 318 LEU CD2 HD21 sing N N 319 LEU CD2 HD22 sing N N 320 LEU CD2 HD23 sing N N 321 LEU OXT HXT sing N N 322 LYS N CA sing N N 323 LYS N H sing N N 324 LYS N H2 sing N N 325 LYS CA C sing N N 326 LYS CA CB sing N N 327 LYS CA HA sing N N 328 LYS C O doub N N 329 LYS C OXT sing N N 330 LYS CB CG sing N N 331 LYS CB HB2 sing N N 332 LYS CB HB3 sing N N 333 LYS CG CD sing N N 334 LYS CG HG2 sing N N 335 LYS CG HG3 sing N N 336 LYS CD CE sing N N 337 LYS CD HD2 sing N N 338 LYS CD HD3 sing N N 339 LYS CE NZ sing N N 340 LYS CE HE2 sing N N 341 LYS CE HE3 sing N N 342 LYS NZ HZ1 sing N N 343 LYS NZ HZ2 sing N N 344 LYS NZ HZ3 sing N N 345 LYS OXT HXT sing N N 346 MET N CA sing N N 347 MET N H sing N N 348 MET N H2 sing N N 349 MET CA C sing N N 350 MET CA CB sing N N 351 MET CA HA sing N N 352 MET C O doub N N 353 MET C OXT sing N N 354 MET CB CG sing N N 355 MET CB HB2 sing N N 356 MET CB HB3 sing N N 357 MET CG SD sing N N 358 MET CG HG2 sing N N 359 MET CG HG3 sing N N 360 MET SD CE sing N N 361 MET CE HE1 sing N N 362 MET CE HE2 sing N N 363 MET CE HE3 sing N N 364 MET OXT HXT sing N N 365 PHE N CA sing N N 366 PHE N H sing N N 367 PHE N H2 sing N N 368 PHE CA C sing N N 369 PHE CA CB sing N N 370 PHE CA HA sing N N 371 PHE C O doub N N 372 PHE C OXT sing N N 373 PHE CB CG sing N N 374 PHE CB HB2 sing N N 375 PHE CB HB3 sing N N 376 PHE CG CD1 doub Y N 377 PHE CG CD2 sing Y N 378 PHE CD1 CE1 sing Y N 379 PHE CD1 HD1 sing N N 380 PHE CD2 CE2 doub Y N 381 PHE CD2 HD2 sing N N 382 PHE CE1 CZ doub Y N 383 PHE CE1 HE1 sing N N 384 PHE CE2 CZ sing Y N 385 PHE CE2 HE2 sing N N 386 PHE CZ HZ sing N N 387 PHE OXT HXT sing N N 388 PRO N CA sing N N 389 PRO N CD sing N N 390 PRO N H sing N N 391 PRO CA C sing N N 392 PRO CA CB sing N N 393 PRO CA HA sing N N 394 PRO C O doub N N 395 PRO C OXT sing N N 396 PRO CB CG sing N N 397 PRO CB HB2 sing N N 398 PRO CB HB3 sing N N 399 PRO CG CD sing N N 400 PRO CG HG2 sing N N 401 PRO CG HG3 sing N N 402 PRO CD HD2 sing N N 403 PRO CD HD3 sing N N 404 PRO OXT HXT sing N N 405 SER N CA sing N N 406 SER N H sing N N 407 SER N H2 sing N N 408 SER CA C sing N N 409 SER CA CB sing N N 410 SER CA HA sing N N 411 SER C O doub N N 412 SER C OXT sing N N 413 SER CB OG sing N N 414 SER CB HB2 sing N N 415 SER CB HB3 sing N N 416 SER OG HG sing N N 417 SER OXT HXT sing N N 418 THR N CA sing N N 419 THR N H sing N N 420 THR N H2 sing N N 421 THR CA C sing N N 422 THR CA CB sing N N 423 THR CA HA sing N N 424 THR C O doub N N 425 THR C OXT sing N N 426 THR CB OG1 sing N N 427 THR CB CG2 sing N N 428 THR CB HB sing N N 429 THR OG1 HG1 sing N N 430 THR CG2 HG21 sing N N 431 THR CG2 HG22 sing N N 432 THR CG2 HG23 sing N N 433 THR OXT HXT sing N N 434 TRP N CA sing N N 435 TRP N H sing N N 436 TRP N H2 sing N N 437 TRP CA C sing N N 438 TRP CA CB sing N N 439 TRP CA HA sing N N 440 TRP C O doub N N 441 TRP C OXT sing N N 442 TRP CB CG sing N N 443 TRP CB HB2 sing N N 444 TRP CB HB3 sing N N 445 TRP CG CD1 doub Y N 446 TRP CG CD2 sing Y N 447 TRP CD1 NE1 sing Y N 448 TRP CD1 HD1 sing N N 449 TRP CD2 CE2 doub Y N 450 TRP CD2 CE3 sing Y N 451 TRP NE1 CE2 sing Y N 452 TRP NE1 HE1 sing N N 453 TRP CE2 CZ2 sing Y N 454 TRP CE3 CZ3 doub Y N 455 TRP CE3 HE3 sing N N 456 TRP CZ2 CH2 doub Y N 457 TRP CZ2 HZ2 sing N N 458 TRP CZ3 CH2 sing Y N 459 TRP CZ3 HZ3 sing N N 460 TRP CH2 HH2 sing N N 461 TRP OXT HXT sing N N 462 TYR N CA sing N N 463 TYR N H sing N N 464 TYR N H2 sing N N 465 TYR CA C sing N N 466 TYR CA CB sing N N 467 TYR CA HA sing N N 468 TYR C O doub N N 469 TYR C OXT sing N N 470 TYR CB CG sing N N 471 TYR CB HB2 sing N N 472 TYR CB HB3 sing N N 473 TYR CG CD1 doub Y N 474 TYR CG CD2 sing Y N 475 TYR CD1 CE1 sing Y N 476 TYR CD1 HD1 sing N N 477 TYR CD2 CE2 doub Y N 478 TYR CD2 HD2 sing N N 479 TYR CE1 CZ doub Y N 480 TYR CE1 HE1 sing N N 481 TYR CE2 CZ sing Y N 482 TYR CE2 HE2 sing N N 483 TYR CZ OH sing N N 484 TYR OH HH sing N N 485 TYR OXT HXT sing N N 486 U OP3 P sing N N 487 U OP3 HOP3 sing N N 488 U P OP1 doub N N 489 U P OP2 sing N N 490 U P "O5'" sing N N 491 U OP2 HOP2 sing N N 492 U "O5'" "C5'" sing N N 493 U "C5'" "C4'" sing N N 494 U "C5'" "H5'" sing N N 495 U "C5'" "H5''" sing N N 496 U "C4'" "O4'" sing N N 497 U "C4'" "C3'" sing N N 498 U "C4'" "H4'" sing N N 499 U "O4'" "C1'" sing N N 500 U "C3'" "O3'" sing N N 501 U "C3'" "C2'" sing N N 502 U "C3'" "H3'" sing N N 503 U "O3'" "HO3'" sing N N 504 U "C2'" "O2'" sing N N 505 U "C2'" "C1'" sing N N 506 U "C2'" "H2'" sing N N 507 U "O2'" "HO2'" sing N N 508 U "C1'" N1 sing N N 509 U "C1'" "H1'" sing N N 510 U N1 C2 sing N N 511 U N1 C6 sing N N 512 U C2 O2 doub N N 513 U C2 N3 sing N N 514 U N3 C4 sing N N 515 U N3 H3 sing N N 516 U C4 O4 doub N N 517 U C4 C5 sing N N 518 U C5 C6 doub N N 519 U C5 H5 sing N N 520 U C6 H6 sing N N 521 VAL N CA sing N N 522 VAL N H sing N N 523 VAL N H2 sing N N 524 VAL CA C sing N N 525 VAL CA CB sing N N 526 VAL CA HA sing N N 527 VAL C O doub N N 528 VAL C OXT sing N N 529 VAL CB CG1 sing N N 530 VAL CB CG2 sing N N 531 VAL CB HB sing N N 532 VAL CG1 HG11 sing N N 533 VAL CG1 HG12 sing N N 534 VAL CG1 HG13 sing N N 535 VAL CG2 HG21 sing N N 536 VAL CG2 HG22 sing N N 537 VAL CG2 HG23 sing N N 538 VAL OXT HXT sing N N 539 # _ndb_struct_conf_na.entry_id 2BU1 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D C 2 1_555 D G 18 1_555 -1.521 0.000 0.055 12.024 -14.517 -13.708 1 R_C2:G18_R R 2 ? R 18 ? 19 1 1 D A 3 1_555 D U 17 1_555 -0.138 -0.218 0.605 5.163 -23.008 2.909 2 R_A3:U17_R R 3 ? R 17 ? 20 1 1 D U 4 1_555 D A 16 1_555 -0.180 -0.226 0.044 -0.739 -20.895 6.153 3 R_U4:A16_R R 4 ? R 16 ? 20 1 1 D G 5 1_555 D C 15 1_555 -0.385 -0.210 0.225 3.396 -11.663 -0.164 4 R_G5:C15_R R 5 ? R 15 ? 19 1 1 D G 7 1_555 D C 14 1_555 -0.423 -0.203 0.320 -3.038 -8.889 1.343 5 R_G7:C14_R R 7 ? R 14 ? 19 1 1 D G 8 1_555 D C 13 1_555 -0.447 -0.015 -0.048 -3.775 -8.669 3.592 6 R_G8:C13_R R 8 ? R 13 ? 19 1 1 E C 2 1_555 E G 18 1_555 -1.222 0.288 0.338 12.771 -30.347 -11.409 7 S_C2:G18_S S 2 ? S 18 ? 19 1 1 E A 3 1_555 E U 17 1_555 -0.776 0.289 -0.407 -7.969 -18.699 6.998 8 S_A3:U17_S S 3 ? S 17 ? 20 1 1 E U 4 1_555 E A 16 1_555 -0.093 -0.107 -0.167 4.155 -20.663 6.244 9 S_U4:A16_S S 4 ? S 16 ? 20 1 1 E G 5 1_555 E C 15 1_555 -0.545 -0.279 -0.092 -1.841 -15.250 0.388 10 S_G5:C15_S S 5 ? S 15 ? 19 1 1 E G 7 1_555 E C 14 1_555 -0.518 0.383 0.338 -4.236 -15.612 7.331 11 S_G7:C14_S S 7 ? S 14 ? 19 1 1 E G 8 1_555 E C 13 1_555 -0.086 0.314 -0.341 -1.203 -9.650 3.796 12 S_G8:C13_S S 8 ? S 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D C 2 1_555 D G 18 1_555 D A 3 1_555 D U 17 1_555 0.581 -2.040 3.424 -4.220 7.477 39.623 -3.768 -1.302 2.933 10.875 6.139 40.506 1 RR_C2A3:U17G18_RR R 2 ? R 18 ? R 3 ? R 17 ? 1 D A 3 1_555 D U 17 1_555 D U 4 1_555 D A 16 1_555 -0.049 -1.249 3.491 6.150 7.889 33.925 -3.255 1.014 3.077 13.169 -10.266 35.327 2 RR_A3U4:A16U17_RR R 3 ? R 17 ? R 4 ? R 16 ? 1 D U 4 1_555 D A 16 1_555 D G 5 1_555 D C 15 1_555 -0.017 -1.030 3.066 -0.636 14.935 31.641 -3.691 -0.055 2.358 25.675 1.094 34.913 3 RR_U4G5:C15A16_RR R 4 ? R 16 ? R 5 ? R 15 ? 1 D G 5 1_555 D C 15 1_555 D G 7 1_555 D C 14 1_555 0.058 -2.137 3.390 -3.003 3.118 31.792 -4.431 -0.647 3.153 5.659 5.450 32.078 4 RR_G5G7:C14C15_RR R 5 ? R 15 ? R 7 ? R 14 ? 1 D G 7 1_555 D C 14 1_555 D G 8 1_555 D C 13 1_555 -0.228 -1.867 3.287 2.450 3.830 33.708 -3.787 0.769 3.039 6.567 -4.201 34.004 5 RR_G7G8:C13C14_RR R 7 ? R 14 ? R 8 ? R 13 ? 1 E C 2 1_555 E G 18 1_555 E A 3 1_555 E U 17 1_555 0.678 -1.982 3.952 -3.942 9.517 34.842 -4.676 -1.707 3.224 15.481 6.411 36.287 6 SS_C2A3:U17G18_SS S 2 ? S 18 ? S 3 ? S 17 ? 1 E A 3 1_555 E U 17 1_555 E U 4 1_555 E A 16 1_555 -0.425 -0.967 3.076 2.035 4.752 37.154 -2.076 0.906 2.909 7.413 -3.175 37.500 7 SS_A3U4:A16U17_SS S 3 ? S 17 ? S 4 ? S 16 ? 1 E U 4 1_555 E A 16 1_555 E G 5 1_555 E C 15 1_555 0.229 -0.880 3.700 3.220 10.372 30.519 -3.586 0.211 3.243 18.966 -5.888 32.351 8 SS_U4G5:C15A16_SS S 4 ? S 16 ? S 5 ? S 15 ? 1 E G 5 1_555 E C 15 1_555 E G 7 1_555 E C 14 1_555 0.552 -2.106 3.149 -5.543 10.934 31.546 -5.121 -1.708 2.194 19.228 9.747 33.788 9 SS_G5G7:C14C15_SS S 5 ? S 15 ? S 7 ? S 14 ? 1 E G 7 1_555 E C 14 1_555 E G 8 1_555 E C 13 1_555 -0.693 -1.529 3.043 2.518 7.278 36.452 -3.245 1.380 2.648 11.478 -3.970 37.229 10 SS_G7G8:C13C14_SS S 7 ? S 14 ? S 8 ? S 13 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'MS2 RECOMBINANT CAPSIDS' # _atom_sites.entry_id 2BU1 _atom_sites.fract_transf_matrix[1][1] 0.003472 _atom_sites.fract_transf_matrix[1][2] 0.002005 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004009 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.001531 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O P S # loop_