HEADER HYDROLASE 12-SEP-05 2C1C TITLE STRUCTURAL BASIS OF THE RESISTANCE OF AN INSECT CARBOXYPEPTIDASE TO TITLE 2 PLANT PROTEASE INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYPEPTIDASE B; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.17.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOVERPA ZEA; SOURCE 3 ORGANISM_COMMON: CORN EARWORM; SOURCE 4 ORGANISM_TAXID: 7113; SOURCE 5 TISSUE: EPITHELIUM; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KM71; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPIC9 KEYWDS INSECT, HELICOVERPA ZEA, CARBOXYPEPTIDASE, METALLOPROTEASE, KEYWDS 2 INSENSITIVE, PLANT INHIBITORS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BAYES,M.COMELLAS-BIGLER,M.RODRIGUEZ DE LA VEGA,K.MASKOS,W.BODE, AUTHOR 2 F.X.AVILES,M.A.JONGSMA,J.BEEKWILDER,J.VENDRELL REVDAT 6 23-OCT-24 2C1C 1 REMARK REVDAT 5 13-DEC-23 2C1C 1 REMARK LINK REVDAT 4 26-JUN-13 2C1C 1 REMARK VERSN CRYST1 REVDAT 3 24-FEB-09 2C1C 1 VERSN REVDAT 2 23-NOV-05 2C1C 1 JRNL REVDAT 1 19-OCT-05 2C1C 0 JRNL AUTH A.BAYES,M.COMELLAS-BIGLER,M.RODRIGUEZ DE LA VEGA,K.MASKOS, JRNL AUTH 2 W.BODE,F.X.AVILES,M.A.JONGSMA,J.BEEKWILDER,J.VENDRELL JRNL TITL STRUCTURAL BASIS OF THE RESISTANCE OF AN INSECT JRNL TITL 2 CARBOXYPEPTIDASE TO PLANT PROTEASE INHIBITORS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 16602 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 16260742 JRNL DOI 10.1073/PNAS.0505489102 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1194919.100 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 27624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1203 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3619 REMARK 3 BIN R VALUE (WORKING SET) : 0.5020 REMARK 3 BIN FREE R VALUE : 0.5190 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 190 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.038 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4904 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 347 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.79000 REMARK 3 B22 (A**2) : 2.99000 REMARK 3 B33 (A**2) : 0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.57000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.76 REMARK 3 ESD FROM SIGMAA (A) : 0.77 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.76 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.60 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.030 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.43 REMARK 3 BSOL : 17.36 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : Y.PAR REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : Y.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2C1C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1290025573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 287.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24576 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1JQG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES 0.1M PH6,5 AMMONIUM SULPHATE 1,6M REMARK 280 DIOXANE 10% YTTRIUM CHLORIDE HEXAHYDRTAE 10MM REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.16977 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 7 CB CG CD1 CD2 REMARK 470 LYS A 28 CE NZ REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 ASN A 97 CG OD1 ND2 REMARK 470 ASN A 134 CG OD1 ND2 REMARK 470 GLN A 214 CD OE1 NE2 REMARK 470 LEU A 245 CG CD1 CD2 REMARK 470 ARG A 309 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU B 7 N CA C REMARK 470 LYS B 28 CD CE NZ REMARK 470 GLU B 40 CD OE1 OE2 REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 470 ASN B 58A CG OD1 ND2 REMARK 470 ASN B 97 CG OD1 ND2 REMARK 470 LYS B 102 CE NZ REMARK 470 ASN B 134 CG OD1 ND2 REMARK 470 GLN B 214 CG CD OE1 NE2 REMARK 470 ARG B 309 CB CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C CYS A 161 O HOH A 2096 0.24 REMARK 500 OE1 GLU B 101 O HOH B 2062 0.53 REMARK 500 CD1 TYR A 24 O HOH A 2015 0.59 REMARK 500 OD1 ASP B 306 O HOH B 2176 0.65 REMARK 500 CG ASN B 122 O HOH B 2076 0.66 REMARK 500 CA CYS B 161 O HOH B 2107 0.66 REMARK 500 OD1 ASN B 122 O HOH B 2076 0.69 REMARK 500 NZ LYS A 102 O HOH A 2059 0.75 REMARK 500 CA GLU A 20 O HOH A 2012 1.05 REMARK 500 C CYS B 161 O HOH B 2107 1.09 REMARK 500 NZ LYS A 48 O HOH A 2026 1.15 REMARK 500 O GLU A 20 O HOH A 2013 1.15 REMARK 500 O GLY A 247A O HOH A 2147 1.23 REMARK 500 CA CYS A 161 O HOH A 2096 1.29 REMARK 500 CE2 TYR A 204 O HOH A 2123 1.35 REMARK 500 O LEU A 217 O HOH A 2135 1.39 REMARK 500 O CYS A 161 O HOH A 2096 1.39 REMARK 500 CE LYS A 102 O HOH A 2059 1.42 REMARK 500 C GLU A 123 O HOH A 2078 1.45 REMARK 500 OD2 ASP A 31 O HOH A 2018 1.45 REMARK 500 N SER A 162 O HOH A 2096 1.46 REMARK 500 N ARG A 124 O HOH A 2078 1.48 REMARK 500 OG1 THR A 221 O HOH A 2138 1.49 REMARK 500 CE1 TYR A 24 O HOH A 2016 1.51 REMARK 500 CB GLU A 20 O HOH A 2012 1.60 REMARK 500 OE2 GLU B 20 O HOH B 2017 1.62 REMARK 500 CB ASP A 57 O HOH A 2037 1.63 REMARK 500 CZ TYR A 204 O HOH A 2123 1.67 REMARK 500 CD GLU A 123 O HOH A 2075 1.71 REMARK 500 CZ TYR A 24 O HOH A 2016 1.73 REMARK 500 CG2 VAL A 224 O HOH A 2136 1.75 REMARK 500 CG TYR A 24 O HOH A 2015 1.75 REMARK 500 CG PRO A 160 O HOH A 2095 1.78 REMARK 500 OE2 GLU B 16 O HOH B 2013 1.82 REMARK 500 O GLU A 123 O HOH A 2078 1.83 REMARK 500 OD1 ASP A 23 O HOH A 2026 1.84 REMARK 500 CD GLU B 123 O HOH B 2074 1.84 REMARK 500 O CYS B 161 O HOH B 2107 1.85 REMARK 500 ND2 ASN B 122 O HOH B 2076 1.87 REMARK 500 Y Y1 A 700 O HOH A 2076 1.88 REMARK 500 CG ASP B 306 O HOH B 2176 1.89 REMARK 500 OD2 ASP A 23 O HOH A 2026 1.91 REMARK 500 OD2 ASP A 57 O HOH A 2037 1.92 REMARK 500 N CYS B 161 O HOH B 2107 1.94 REMARK 500 CD GLU B 101 O HOH B 2062 1.97 REMARK 500 CE1 TYR A 24 O HOH A 2015 1.98 REMARK 500 OE2 GLU A 123 O HOH A 2076 1.99 REMARK 500 CB PRO A 160 O HOH A 2095 2.00 REMARK 500 CG ASP A 57 O HOH A 2037 2.01 REMARK 500 C GLU A 20 O HOH A 2012 2.02 REMARK 500 REMARK 500 THIS ENTRY HAS 66 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CE1 TYR A 118 O HOH A 2011 2556 0.30 REMARK 500 CD2 LEU A 217 CD2 LEU B 212 2555 0.66 REMARK 500 OD2 ASP B 31 CA TYR B 248 1565 0.70 REMARK 500 CG PRO A 8 CB PRO A 134B 2546 0.79 REMARK 500 OD1 ASP A 31 CA TYR A 248 1545 0.84 REMARK 500 CD GLN A 13 CD1 LEU A 134C 2546 0.92 REMARK 500 CG LEU A 217 CD2 LEU B 212 2555 0.95 REMARK 500 CG PRO A 8 CA PRO A 134B 2546 0.98 REMARK 500 CD GLN B 13 CD1 LEU B 134C 2555 1.01 REMARK 500 CG1 VAL B 17 CB ILE B 137 2555 1.18 REMARK 500 CD2 LEU A 212 CB LEU B 217 2555 1.23 REMARK 500 CG1 VAL A 17 CB ILE A 137 2546 1.27 REMARK 500 NE2 GLN B 13 CD1 LEU B 134C 2555 1.34 REMARK 500 CG PRO B 134B O HOH B 2003 2545 1.35 REMARK 500 CD2 LEU A 217 CG LEU B 212 2555 1.39 REMARK 500 OE1 GLU B 20 CZ ARG B 130 2555 1.42 REMARK 500 OE1 GLN A 13 CD1 LEU A 134C 2546 1.42 REMARK 500 NE2 GLN A 13 CD1 LEU A 134C 2546 1.45 REMARK 500 CG2 VAL A 17 SG CYS A 138 2546 1.46 REMARK 500 CG2 VAL B 17 SG CYS B 138 2555 1.49 REMARK 500 CG LEU B 7 CD1 ILE B 137 2555 1.50 REMARK 500 OE1 GLN B 13 CD1 LEU B 134C 2555 1.51 REMARK 500 CD GLU B 20 NH2 ARG B 130 2555 1.52 REMARK 500 OD1 ASP A 31 N TYR A 248 1545 1.55 REMARK 500 OE1 GLU B 20 NH2 ARG B 130 2555 1.56 REMARK 500 OE1 GLN B 13 CG LEU B 134C 2555 1.56 REMARK 500 OE1 GLN A 13 CG LEU A 134C 2546 1.56 REMARK 500 CD1 TYR A 118 O HOH A 2011 2556 1.56 REMARK 500 OE2 GLU A 20 NH1 ARG A 130 2546 1.62 REMARK 500 CG LEU A 212 CD2 LEU B 217 2555 1.63 REMARK 500 CG2 VAL A 17 CB CYS A 138 2546 1.64 REMARK 500 CB PRO A 8 CB PRO A 134B 2546 1.65 REMARK 500 OD2 ASP B 31 CB TYR B 248 1565 1.66 REMARK 500 CG1 VAL A 17 CA ILE A 137 2546 1.66 REMARK 500 OE1 GLU B 20 NH1 ARG B 130 2555 1.67 REMARK 500 CD GLU B 14 OG SER B 159 2555 1.67 REMARK 500 OD2 ASP B 31 N TYR B 248 1565 1.67 REMARK 500 CG1 VAL B 17 CA ILE B 137 2555 1.67 REMARK 500 CB PRO B 134B O HOH B 2003 2545 1.68 REMARK 500 OE1 GLU B 14 OG SER B 159 2555 1.69 REMARK 500 CG1 VAL A 17 C ILE A 137 2546 1.75 REMARK 500 CD GLU A 20 NH1 ARG A 130 2546 1.75 REMARK 500 O HOH B 2017 O HOH B 2074 2555 1.76 REMARK 500 CG2 VAL B 17 CB CYS B 138 2555 1.76 REMARK 500 CG LEU A 212 CB LEU B 217 2555 1.76 REMARK 500 CG1 VAL B 17 C ILE B 137 2555 1.77 REMARK 500 CB GLU A 14 CB CYS A 161 2546 1.78 REMARK 500 OE2 GLU A 20 CZ ARG A 130 2546 1.78 REMARK 500 O HOH B 2022 O HOH B 2087 2555 1.79 REMARK 500 OD2 ASP B 23 OH TYR B 118 2555 1.79 REMARK 500 REMARK 500 THIS ENTRY HAS 103 SYMMETRY CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 205 O - C - N ANGL. DEV. = -10.7 DEGREES REMARK 500 PRO B 109 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 8 78.34 28.69 REMARK 500 ALA A 38 -84.85 -47.09 REMARK 500 GLU A 58 0.63 -69.42 REMARK 500 ASN A 112 78.63 -104.31 REMARK 500 ASN A 122 -71.06 -123.92 REMARK 500 VAL A 150 35.80 37.37 REMARK 500 TRP A 151 129.70 -33.51 REMARK 500 ASN A 152 10.27 58.49 REMARK 500 SER A 200 72.87 53.74 REMARK 500 TYR B 9 40.98 -83.35 REMARK 500 TYR B 29 63.19 -118.93 REMARK 500 ALA B 39 -172.77 -173.29 REMARK 500 ASN B 56 33.58 35.69 REMARK 500 ASN B 112 79.79 -114.68 REMARK 500 ASN B 122 -47.97 -132.01 REMARK 500 VAL B 150 39.55 39.05 REMARK 500 TRP B 151 127.26 -39.37 REMARK 500 HIS B 196 -161.75 -127.76 REMARK 500 SER B 200 75.39 51.75 REMARK 500 SER B 276 -74.28 -62.13 REMARK 500 TRP B 277A -35.39 -38.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 248 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2068 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B2053 DISTANCE = 6.62 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 625 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 ND1 REMARK 620 2 GLU A 72 OE1 85.2 REMARK 620 3 GLU A 72 OE2 102.5 53.1 REMARK 620 4 HIS A 196 ND1 106.5 146.1 93.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 625 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 69 ND1 REMARK 620 2 GLU B 72 OE1 83.2 REMARK 620 3 GLU B 72 OE2 112.0 56.3 REMARK 620 4 HIS B 196 ND1 111.3 157.5 101.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 625 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y1 A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 625 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y1 B 700 DBREF 2C1C A 7 309 PDB 2C1C 2C1C 7 309 DBREF 2C1C B 7 309 PDB 2C1C 2C1C 7 309 SEQRES 1 A 312 LEU PRO TYR ASP ASN TYR GLN GLU LEU GLU VAL ILE ASP SEQRES 2 A 312 GLU TYR LEU ASP TYR ILE GLY GLU LYS TYR PRO ASP VAL SEQRES 3 A 312 ALA THR VAL VAL ASN ALA ALA GLU SER PHE GLU GLY ARG SEQRES 4 A 312 PRO ILE LYS TYR ILE LYS ILE SER THR THR ASN PHE GLU SEQRES 5 A 312 ASP GLU ASN LYS PRO VAL ILE PHE ILE ASP GLY GLY ILE SEQRES 6 A 312 HIS ALA ARG GLU TRP ILE SER PRO PRO SER VAL THR TRP SEQRES 7 A 312 ALA ILE HIS LYS LEU VAL GLU ASP VAL THR GLU ASN ASP SEQRES 8 A 312 LEU LEU GLU LYS PHE ASP TRP ILE LEU LEU PRO VAL VAL SEQRES 9 A 312 ASN PRO ASP GLY TYR LYS TYR THR PHE THR ASN GLU ARG SEQRES 10 A 312 PHE TRP ARG LYS THR ARG SER THR ASN ASN ASN PRO LEU SEQRES 11 A 312 SER GLN ILE CYS ARG GLY ALA ASP GLY ASN ARG ASN PHE SEQRES 12 A 312 ASP PHE VAL TRP ASN SER ILE GLY THR SER ASN SER PRO SEQRES 13 A 312 CYS SER ASP ILE TYR ALA GLY THR SER ALA PHE SER GLU SEQRES 14 A 312 VAL GLU THR ARG VAL VAL ARG ASP ILE LEU HIS GLU HIS SEQRES 15 A 312 LEU ALA ARG MET ALA LEU TYR LEU THR MET HIS SER PHE SEQRES 16 A 312 GLY SER MET ILE LEU TYR PRO TRP GLY HIS ASP GLY SER SEQRES 17 A 312 LEU SER GLN ASN ALA LEU GLY LEU HIS THR VAL GLY VAL SEQRES 18 A 312 ALA MET ALA SER VAL ILE GLN SER ASN ALA LEU PRO ASN SEQRES 19 A 312 PHE PRO PRO TYR THR VAL GLY ASN SER ALA LEU VAL ILE SEQRES 20 A 312 GLY TYR TYR ILE ALA GLY SER SER GLU ASP TYR ALA HIS SEQRES 21 A 312 SER ILE GLY VAL PRO LEU SER TYR THR TYR GLU LEU PRO SEQRES 22 A 312 GLY LEU SER SER GLY TRP ASP GLY PHE HIS LEU PRO PRO SEQRES 23 A 312 GLN TYR ILE GLU GLN VAL CYS ARG GLU THR TRP GLU GLY SEQRES 24 A 312 ILE VAL VAL GLY ALA ARG ARG ALA GLY ASP LEU PHE ARG SEQRES 1 B 312 LEU PRO TYR ASP ASN TYR GLN GLU LEU GLU VAL ILE ASP SEQRES 2 B 312 GLU TYR LEU ASP TYR ILE GLY GLU LYS TYR PRO ASP VAL SEQRES 3 B 312 ALA THR VAL VAL ASN ALA ALA GLU SER PHE GLU GLY ARG SEQRES 4 B 312 PRO ILE LYS TYR ILE LYS ILE SER THR THR ASN PHE GLU SEQRES 5 B 312 ASP GLU ASN LYS PRO VAL ILE PHE ILE ASP GLY GLY ILE SEQRES 6 B 312 HIS ALA ARG GLU TRP ILE SER PRO PRO SER VAL THR TRP SEQRES 7 B 312 ALA ILE HIS LYS LEU VAL GLU ASP VAL THR GLU ASN ASP SEQRES 8 B 312 LEU LEU GLU LYS PHE ASP TRP ILE LEU LEU PRO VAL VAL SEQRES 9 B 312 ASN PRO ASP GLY TYR LYS TYR THR PHE THR ASN GLU ARG SEQRES 10 B 312 PHE TRP ARG LYS THR ARG SER THR ASN ASN ASN PRO LEU SEQRES 11 B 312 SER GLN ILE CYS ARG GLY ALA ASP GLY ASN ARG ASN PHE SEQRES 12 B 312 ASP PHE VAL TRP ASN SER ILE GLY THR SER ASN SER PRO SEQRES 13 B 312 CYS SER ASP ILE TYR ALA GLY THR SER ALA PHE SER GLU SEQRES 14 B 312 VAL GLU THR ARG VAL VAL ARG ASP ILE LEU HIS GLU HIS SEQRES 15 B 312 LEU ALA ARG MET ALA LEU TYR LEU THR MET HIS SER PHE SEQRES 16 B 312 GLY SER MET ILE LEU TYR PRO TRP GLY HIS ASP GLY SER SEQRES 17 B 312 LEU SER GLN ASN ALA LEU GLY LEU HIS THR VAL GLY VAL SEQRES 18 B 312 ALA MET ALA SER VAL ILE GLN SER ASN ALA LEU PRO ASN SEQRES 19 B 312 PHE PRO PRO TYR THR VAL GLY ASN SER ALA LEU VAL ILE SEQRES 20 B 312 GLY TYR TYR ILE ALA GLY SER SER GLU ASP TYR ALA HIS SEQRES 21 B 312 SER ILE GLY VAL PRO LEU SER TYR THR TYR GLU LEU PRO SEQRES 22 B 312 GLY LEU SER SER GLY TRP ASP GLY PHE HIS LEU PRO PRO SEQRES 23 B 312 GLN TYR ILE GLU GLN VAL CYS ARG GLU THR TRP GLU GLY SEQRES 24 B 312 ILE VAL VAL GLY ALA ARG ARG ALA GLY ASP LEU PHE ARG HET ZN A 625 1 HET Y1 A 700 1 HET ZN B 625 1 HET Y1 B 700 1 HETNAM ZN ZINC ION HETNAM Y1 YTTRIUM ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 Y1 2(Y 2+) FORMUL 7 HOH *347(H2 O) HELIX 1 1 GLU A 14 TYR A 29 1 16 HELIX 2 2 ILE A 74 GLU A 87A 1 15 HELIX 3 3 ASN A 97 PHE A 103 1 7 HELIX 4 4 ASN A 112 ASN A 122 1 11 HELIX 5 5 ASN A 134A ILE A 137 5 6 HELIX 6 6 ASP A 142 ASN A 146 5 5 HELIX 7 7 GLU A 173 LEU A 187 1 15 HELIX 8 8 ASN A 215 SER A 232 1 18 HELIX 9 9 SER A 243 GLY A 247A 1 6 HELIX 10 10 SER A 253 ILE A 261 1 9 HELIX 11 11 GLY A 277 HIS A 280 5 6 HELIX 12 12 PRO A 282 GLN A 284 5 3 HELIX 13 13 TYR A 285 ARG A 309 1 25 HELIX 14 14 GLU B 14 TYR B 29 1 16 HELIX 15 15 ILE B 74 GLU B 87A 1 15 HELIX 16 16 ASN B 97 PHE B 103 1 7 HELIX 17 17 ASN B 112 ASN B 122 1 11 HELIX 18 18 ASN B 134A ILE B 137 5 6 HELIX 19 19 ASP B 142 ASN B 146 5 5 HELIX 20 20 GLU B 173 HIS B 186 1 14 HELIX 21 21 ASN B 215 SER B 232 1 18 HELIX 22 22 SER B 243 ILE B 247 1 5 HELIX 23 23 SER B 253 ILE B 261 1 9 HELIX 24 24 GLY B 277 HIS B 280 5 6 HELIX 25 25 PRO B 282 GLN B 284 5 3 HELIX 26 26 TYR B 285 ARG B 309 1 25 SHEET 1 AA 8 ALA A 33 GLU A 40 0 SHEET 2 AA 8 PRO A 46 ILE A 52 -1 O ILE A 47 N ALA A 38 SHEET 3 AA 8 ASP A 104 LEU A 108 -1 O TRP A 105 N ILE A 52 SHEET 4 AA 8 VAL A 61 GLY A 66 1 O ILE A 62 N ILE A 106 SHEET 5 AA 8 MET A 189 HIS A 196 1 N ALA A 190 O VAL A 61 SHEET 6 AA 8 LEU A 265 GLU A 270 1 O LEU A 265 N TYR A 192 SHEET 7 AA 8 MET A 201 TYR A 204 -1 O MET A 201 N GLU A 270 SHEET 8 AA 8 THR A 239 ASN A 242 1 O THR A 239 N ILE A 202 SHEET 1 BA 8 ALA B 33 GLU B 40 0 SHEET 2 BA 8 PRO B 46 ILE B 52 -1 O ILE B 47 N ALA B 38 SHEET 3 BA 8 ASP B 104 LEU B 108 -1 O TRP B 105 N ILE B 52 SHEET 4 BA 8 VAL B 61 GLY B 66 1 O ILE B 62 N ILE B 106 SHEET 5 BA 8 MET B 189 HIS B 196 1 N ALA B 190 O VAL B 61 SHEET 6 BA 8 LEU B 265 GLU B 270 1 O LEU B 265 N TYR B 192 SHEET 7 BA 8 MET B 201 TYR B 204 -1 O MET B 201 N GLU B 270 SHEET 8 BA 8 THR B 239 ASN B 242 1 O THR B 239 N ILE B 202 SSBOND 1 CYS A 138 CYS A 161 1555 1555 2.03 SSBOND 2 CYS B 138 CYS B 161 1555 1555 2.03 LINK ND1 HIS A 69 ZN ZN A 625 1555 1555 2.03 LINK OE1 GLU A 72 ZN ZN A 625 1555 1555 2.56 LINK OE2 GLU A 72 ZN ZN A 625 1555 1555 2.42 LINK ND1 HIS A 196 ZN ZN A 625 1555 1555 2.32 LINK ND1 HIS B 69 ZN ZN B 625 1555 1555 2.44 LINK OE1 GLU B 72 ZN ZN B 625 1555 1555 2.44 LINK OE2 GLU B 72 ZN ZN B 625 1555 1555 2.22 LINK ND1 HIS B 196 ZN ZN B 625 1555 1555 2.13 CISPEP 1 SER A 197 PHE A 198 0 8.68 CISPEP 2 PRO A 205 TRP A 206 0 -10.69 CISPEP 3 SER B 197 PHE B 198 0 0.17 CISPEP 4 PRO B 205 TRP B 206 0 1.24 SITE 1 AC1 3 HIS A 69 GLU A 72 HIS A 196 SITE 1 AC2 3 GLU A 123 HOH A2074 HOH A2076 SITE 1 AC3 3 HIS B 69 GLU B 72 HIS B 196 SITE 1 AC4 2 GLU B 123 HOH B2079 CRYST1 42.012 58.339 146.564 90.00 89.87 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023803 0.000000 -0.000054 0.00000 SCALE2 0.000000 0.020687 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006823 0.00000