HEADER ISOMERASE 05-OCT-05 2C3B TITLE THE CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS CYCLOPHILIN REVEALS 3D TITLE 2 DOMAIN SWAPPING OF A CENTRAL ELEMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PPIASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CYCLOPHILIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS; SOURCE 3 ORGANISM_TAXID: 5085; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE32 KEYWDS ISOMERASE, 3D DOMAIN SWAPPING, MISFOLDING, PPIASE, ASP F 11, KEYWDS 2 ALLERGEN, ROTAMASE EXPDTA X-RAY DIFFRACTION AUTHOR A.LIMACHER,D.P.KLOER,S.FLUCKIGER,G.FOLKERS,R.CRAMERI,L.SCAPOZZA REVDAT 5 13-NOV-24 2C3B 1 REMARK REVDAT 4 13-JUL-11 2C3B 1 VERSN REVDAT 3 24-FEB-09 2C3B 1 VERSN REVDAT 2 15-FEB-06 2C3B 1 JRNL REVDAT 1 30-JAN-06 2C3B 0 JRNL AUTH A.LIMACHER,D.P.KLOER,S.FLUCKIGER,G.FOLKERS,R.CRAMERI, JRNL AUTH 2 L.SCAPOZZA JRNL TITL THE CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS CYCLOPHILIN JRNL TITL 2 REVEALS 3D DOMAIN SWAPPING OF A CENTRAL ELEMENT JRNL REF STRUCTURE V. 14 185 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 16472738 JRNL DOI 10.1016/J.STR.2005.10.015 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0003 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 31360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1675 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2264 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2162 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.38000 REMARK 3 B12 (A**2) : -0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.037 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2224 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2018 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2989 ; 1.947 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4704 ; 0.932 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 271 ; 4.090 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;36.843 ;23.367 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 398 ;10.602 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;13.020 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 329 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2429 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 469 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 382 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1928 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1070 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1326 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 91 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.199 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.245 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.102 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1766 ; 2.940 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2216 ; 3.330 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 998 ; 5.529 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 773 ; 7.187 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 69 REMARK 3 RESIDUE RANGE : A 128 A 171 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2957 -3.9885 74.4592 REMARK 3 T TENSOR REMARK 3 T11: -0.0108 T22: -0.1472 REMARK 3 T33: -0.1707 T12: -0.0511 REMARK 3 T13: 0.0008 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 4.0014 L22: 3.9954 REMARK 3 L33: 2.4284 L12: 1.7292 REMARK 3 L13: 0.3143 L23: 1.4301 REMARK 3 S TENSOR REMARK 3 S11: -0.2246 S12: 0.4885 S13: 0.2039 REMARK 3 S21: -0.6900 S22: 0.1588 S23: 0.2555 REMARK 3 S31: -0.2537 S32: -0.1262 S33: 0.0658 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 92 A 127 REMARK 3 ORIGIN FOR THE GROUP (A): 20.8109 6.2146 95.1479 REMARK 3 T TENSOR REMARK 3 T11: -0.1277 T22: -0.2162 REMARK 3 T33: -0.0895 T12: 0.0814 REMARK 3 T13: 0.0171 T23: -0.0357 REMARK 3 L TENSOR REMARK 3 L11: 6.4429 L22: 5.9844 REMARK 3 L33: 7.2573 L12: 0.2441 REMARK 3 L13: 0.0819 L23: 1.5913 REMARK 3 S TENSOR REMARK 3 S11: -0.0937 S12: 0.4342 S13: 0.0639 REMARK 3 S21: -0.3603 S22: 0.1032 S23: 0.5598 REMARK 3 S31: -0.1177 S32: -0.4380 S33: -0.0094 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 68 REMARK 3 RESIDUE RANGE : B 128 B 171 REMARK 3 ORIGIN FOR THE GROUP (A): 25.1891 2.1288 107.0887 REMARK 3 T TENSOR REMARK 3 T11: -0.0380 T22: -0.1833 REMARK 3 T33: -0.1405 T12: 0.0941 REMARK 3 T13: 0.0591 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 4.0487 L22: 3.9811 REMARK 3 L33: 2.7609 L12: -2.0089 REMARK 3 L13: -0.1396 L23: 0.3600 REMARK 3 S TENSOR REMARK 3 S11: -0.2021 S12: -0.4112 S13: -0.1790 REMARK 3 S21: 0.5247 S22: 0.1749 S23: 0.3394 REMARK 3 S31: 0.2408 S32: -0.0882 S33: 0.0273 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 96 B 127 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7833 -4.4926 84.2331 REMARK 3 T TENSOR REMARK 3 T11: -0.1361 T22: -0.2265 REMARK 3 T33: -0.0844 T12: -0.0246 REMARK 3 T13: 0.0240 T23: -0.0346 REMARK 3 L TENSOR REMARK 3 L11: 9.0448 L22: 5.7169 REMARK 3 L33: 13.0616 L12: 2.8201 REMARK 3 L13: -0.9560 L23: 4.2558 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: -0.1329 S13: 0.0506 REMARK 3 S21: 0.1294 S22: -0.0127 S23: 0.7459 REMARK 3 S31: 0.0744 S32: -0.4482 S33: 0.0804 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2C3B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1290023307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99990 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33079 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 45.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DROP SOLUTION: 13% AMMONIUM SULFATE, REMARK 280 0.1 M MES PH 6. RESERVOIR SOLUTION: 50% AMMONIUM SULFATE, 0.1 M REMARK 280 SODIUM CITRATE PH 5.5., PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.09600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 104.19200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 104.19200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 52.09600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 70 REMARK 465 THR A 71 REMARK 465 ARG A 72 REMARK 465 GLY A 73 REMARK 465 ASN A 74 REMARK 465 GLY A 75 REMARK 465 THR A 76 REMARK 465 GLY A 77 REMARK 465 GLY A 78 REMARK 465 ARG A 79 REMARK 465 SER A 80 REMARK 465 ILE A 81 REMARK 465 TYR A 82 REMARK 465 GLY A 83 REMARK 465 ASP A 84 REMARK 465 LYS A 85 REMARK 465 PHE A 86 REMARK 465 ALA A 87 REMARK 465 ASP A 88 REMARK 465 GLU A 89 REMARK 465 ASN A 90 REMARK 465 PHE A 91 REMARK 465 ASN A 105 REMARK 465 ALA A 106 REMARK 465 GLY A 107 REMARK 465 PRO A 108 REMARK 465 ASN A 109 REMARK 465 THR A 110 REMARK 465 ASN A 111 REMARK 465 GLY A 112 REMARK 465 SER A 113 REMARK 465 SER B 0 REMARK 465 ASP B 69 REMARK 465 PHE B 70 REMARK 465 THR B 71 REMARK 465 ARG B 72 REMARK 465 GLY B 73 REMARK 465 ASN B 74 REMARK 465 GLY B 75 REMARK 465 THR B 76 REMARK 465 GLY B 77 REMARK 465 GLY B 78 REMARK 465 ARG B 79 REMARK 465 SER B 80 REMARK 465 ILE B 81 REMARK 465 TYR B 82 REMARK 465 GLY B 83 REMARK 465 ASP B 84 REMARK 465 LYS B 85 REMARK 465 PHE B 86 REMARK 465 ALA B 87 REMARK 465 ASP B 88 REMARK 465 GLU B 89 REMARK 465 ASN B 90 REMARK 465 PHE B 91 REMARK 465 SER B 92 REMARK 465 ARG B 93 REMARK 465 LYS B 94 REMARK 465 HIS B 95 REMARK 465 ASN B 105 REMARK 465 ALA B 106 REMARK 465 GLY B 107 REMARK 465 PRO B 108 REMARK 465 ASN B 109 REMARK 465 THR B 110 REMARK 465 ASN B 111 REMARK 465 GLY B 112 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2039 O HOH B 2040 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 29 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 28 59.87 -103.08 REMARK 500 GLU A 53 0.21 82.88 REMARK 500 PHE A 63 -61.59 -141.57 REMARK 500 PHE B 28 59.62 -96.40 REMARK 500 PHE B 63 -58.56 -139.97 REMARK 500 VAL B 121 47.71 37.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1172 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1172 DBREF 2C3B A 0 0 PDB 2C3B 2C3B 0 0 DBREF 2C3B A 1 171 UNP Q9Y7F6 Q9Y7F6_ASPFU 8 178 DBREF 2C3B B 0 0 PDB 2C3B 2C3B 0 0 DBREF 2C3B B 1 171 UNP Q9Y7F6 Q9Y7F6_ASPFU 8 178 SEQRES 1 A 172 SER MET SER GLN VAL PHE PHE ASP VAL GLU TYR ALA PRO SEQRES 2 A 172 VAL GLY THR ALA GLU THR LYS VAL GLY ARG ILE VAL PHE SEQRES 3 A 172 ASN LEU PHE ASP LYS ASP VAL PRO LYS THR ALA LYS ASN SEQRES 4 A 172 PHE ARG GLU LEU CYS LYS ARG PRO ALA GLY GLU GLY TYR SEQRES 5 A 172 ARG GLU SER THR PHE HIS ARG ILE ILE PRO ASN PHE MET SEQRES 6 A 172 ILE GLN GLY GLY ASP PHE THR ARG GLY ASN GLY THR GLY SEQRES 7 A 172 GLY ARG SER ILE TYR GLY ASP LYS PHE ALA ASP GLU ASN SEQRES 8 A 172 PHE SER ARG LYS HIS ASP LYS LYS GLY ILE LEU SER MET SEQRES 9 A 172 ALA ASN ALA GLY PRO ASN THR ASN GLY SER GLN PHE PHE SEQRES 10 A 172 ILE THR THR ALA VAL THR SER TRP LEU ASP GLY LYS HIS SEQRES 11 A 172 VAL VAL PHE GLY GLU VAL ALA ASP GLU LYS SER TYR SER SEQRES 12 A 172 VAL VAL LYS GLU ILE GLU ALA LEU GLY SER SER SER GLY SEQRES 13 A 172 SER VAL ARG SER ASN THR ARG PRO LYS ILE VAL ASN CYS SEQRES 14 A 172 GLY GLU LEU SEQRES 1 B 172 SER MET SER GLN VAL PHE PHE ASP VAL GLU TYR ALA PRO SEQRES 2 B 172 VAL GLY THR ALA GLU THR LYS VAL GLY ARG ILE VAL PHE SEQRES 3 B 172 ASN LEU PHE ASP LYS ASP VAL PRO LYS THR ALA LYS ASN SEQRES 4 B 172 PHE ARG GLU LEU CYS LYS ARG PRO ALA GLY GLU GLY TYR SEQRES 5 B 172 ARG GLU SER THR PHE HIS ARG ILE ILE PRO ASN PHE MET SEQRES 6 B 172 ILE GLN GLY GLY ASP PHE THR ARG GLY ASN GLY THR GLY SEQRES 7 B 172 GLY ARG SER ILE TYR GLY ASP LYS PHE ALA ASP GLU ASN SEQRES 8 B 172 PHE SER ARG LYS HIS ASP LYS LYS GLY ILE LEU SER MET SEQRES 9 B 172 ALA ASN ALA GLY PRO ASN THR ASN GLY SER GLN PHE PHE SEQRES 10 B 172 ILE THR THR ALA VAL THR SER TRP LEU ASP GLY LYS HIS SEQRES 11 B 172 VAL VAL PHE GLY GLU VAL ALA ASP GLU LYS SER TYR SER SEQRES 12 B 172 VAL VAL LYS GLU ILE GLU ALA LEU GLY SER SER SER GLY SEQRES 13 B 172 SER VAL ARG SER ASN THR ARG PRO LYS ILE VAL ASN CYS SEQRES 14 B 172 GLY GLU LEU HET SO4 A1172 5 HET SO4 B1172 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *123(H2 O) HELIX 1 1 PRO A 33 LYS A 44 1 12 HELIX 2 2 ARG A 93 LYS A 97 1 5 HELIX 3 3 GLU A 138 GLU A 148 1 11 HELIX 4 4 PRO B 33 LYS B 44 1 12 HELIX 5 5 THR B 122 TRP B 124 1 3 HELIX 6 6 GLU B 138 GLU B 148 1 11 SHEET 1 AA 8 ARG A 58 ILE A 60 0 SHEET 2 AA 8 MET A 64 GLY A 67 -1 O MET A 64 N ILE A 60 SHEET 3 AA 8 PHE B 115 THR B 118 -1 O PHE B 115 N GLY A 67 SHEET 4 AA 8 ILE B 100 MET B 103 -1 O ILE B 100 N THR B 118 SHEET 5 AA 8 VAL A 130 VAL A 135 -1 O VAL A 130 N MET B 103 SHEET 6 AA 8 LYS A 19 LEU A 27 -1 O ASN A 26 N GLU A 134 SHEET 7 AA 8 VAL A 4 TYR A 10 -1 O VAL A 4 N PHE A 25 SHEET 8 AA 8 LYS A 164 GLU A 170 -1 O LYS A 164 N GLU A 9 SHEET 1 BA 8 ARG B 58 ILE B 60 0 SHEET 2 BA 8 MET B 64 GLY B 67 -1 O MET B 64 N ILE B 60 SHEET 3 BA 8 PHE A 115 THR A 118 -1 O PHE A 115 N GLY B 67 SHEET 4 BA 8 ILE A 100 MET A 103 -1 O ILE A 100 N THR A 118 SHEET 5 BA 8 VAL B 130 VAL B 135 -1 O VAL B 130 N MET A 103 SHEET 6 BA 8 LYS B 19 LEU B 27 -1 O ASN B 26 N GLU B 134 SHEET 7 BA 8 GLN B 3 TYR B 10 -1 O VAL B 4 N PHE B 25 SHEET 8 BA 8 LYS B 164 LEU B 171 -1 O LYS B 164 N GLU B 9 SSBOND 1 CYS A 43 CYS A 168 1555 1555 2.04 SSBOND 2 CYS B 43 CYS B 168 1555 1555 2.04 SITE 1 AC1 4 VAL A 32 PRO A 33 LYS A 34 THR A 35 SITE 1 AC2 4 VAL B 32 PRO B 33 LYS B 34 THR B 35 CRYST1 64.829 64.829 156.288 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015425 0.008906 0.000000 0.00000 SCALE2 0.000000 0.017811 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006398 0.00000