HEADER TOXIN 26-OCT-05 2C5C TITLE SHIGA-LIKE TOXIN 1 B SUBUNIT COMPLEXED WITH A BIVALENT INHIBITOR CAVEAT 2C5C GLC K 1 HAS WRONG CHIRALITY AT ATOM C1 GLC L 1 HAS WRONG CAVEAT 2 2C5C CHIRALITY AT ATOM C1 GLC M 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 2C5C GLC N 1 HAS WRONG CHIRALITY AT ATOM C1 GLC O 1 HAS WRONG CAVEAT 4 2C5C CHIRALITY AT ATOM C1 GLC Q 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 5 2C5C GLC V 1 HAS WRONG CHIRALITY AT ATOM C1 GLC Y 1 HAS WRONG CAVEAT 6 2C5C CHIRALITY AT ATOM C1 GLA A 2 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 7 2C5C GLA B 2 HAS WRONG CHIRALITY AT ATOM C1 GLC C 1 HAS WRONG CAVEAT 8 2C5C CHIRALITY AT ATOM C1 GLC D 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHIGA-LIKE TOXIN 1 B SUBUNIT; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J; COMPND 4 FRAGMENT: RECEPTOR-BINDING DOMAIN, RESIDUES 21-89; COMPND 5 SYNONYM: VEROTOXIN 1 SUBUNIT B; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE H30; SOURCE 3 ORGANISM_TAXID: 12371; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 OTHER_DETAILS: ISOLATED FROM E. COLI O157 H7 KEYWDS BACTERIAL EXOTOXIN, GB3 BINDING ACTIVITY, BIVALENT LIGAND, PROTEIN- KEYWDS 2 CARBOHYDRATE RECOGNITION, OB FOLD, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR R.B.DODD,R.J.READ REVDAT 7 13-DEC-23 2C5C 1 HETSYN LINK REVDAT 6 29-JUL-20 2C5C 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 01-JUL-20 2C5C 1 REMARK REVDAT 4 19-DEC-18 2C5C 1 CAVEAT LINK ATOM REVDAT 3 13-JUL-11 2C5C 1 VERSN REVDAT 2 24-FEB-09 2C5C 1 VERSN REVDAT 1 27-NOV-06 2C5C 0 JRNL AUTH R.B.DODD,R.J.READ JRNL TITL EXTENSIVE CROSS-LINKING OF THE SHIGA-LIKE TOXIN 1 B SUBUNIT JRNL TITL 2 BY A BIVALENT LIGAND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.29 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 19087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1029 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1392 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3440 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5400 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 718 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.469 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.315 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.995 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6256 ; 0.024 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 5297 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8500 ; 2.479 ; 2.067 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12281 ; 1.174 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 680 ; 6.315 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1138 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6187 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1132 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 921 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5670 ; 0.242 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3477 ; 0.098 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 163 ; 0.196 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.172 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.302 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.220 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3400 ; 0.490 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5520 ; 0.946 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2856 ; 1.795 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2980 ; 2.952 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D E F G H I J REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 57 1 REMARK 3 1 B 1 B 57 1 REMARK 3 1 C 1 C 57 1 REMARK 3 1 D 1 D 57 1 REMARK 3 1 E 1 E 57 1 REMARK 3 1 F 1 F 57 1 REMARK 3 1 G 1 G 57 1 REMARK 3 1 H 1 H 57 1 REMARK 3 1 I 1 I 57 1 REMARK 3 1 J 1 J 57 1 REMARK 3 2 A 59 A 69 1 REMARK 3 2 B 59 B 69 1 REMARK 3 2 C 59 C 69 1 REMARK 3 2 D 59 D 69 1 REMARK 3 2 E 59 E 69 1 REMARK 3 2 F 59 F 69 1 REMARK 3 2 G 59 G 69 1 REMARK 3 2 H 59 H 69 1 REMARK 3 2 I 59 I 69 1 REMARK 3 2 J 59 J 69 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1003 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 1003 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 1003 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 1003 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 E (A): 1003 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 F (A): 1003 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 G (A): 1003 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 H (A): 1003 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 I (A): 1003 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 J (A): 1003 ; 0.06 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 1003 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 1003 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 1003 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 1003 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 1 E (A**2): 1003 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 1 F (A**2): 1003 ; 0.13 ; 0.50 REMARK 3 TIGHT THERMAL 1 G (A**2): 1003 ; 0.11 ; 0.50 REMARK 3 TIGHT THERMAL 1 H (A**2): 1003 ; 0.10 ; 0.50 REMARK 3 TIGHT THERMAL 1 I (A**2): 1003 ; 0.13 ; 0.50 REMARK 3 TIGHT THERMAL 1 J (A**2): 1003 ; 0.15 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B C D E F G H J REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 58 B 58 1 REMARK 3 1 C 58 C 58 1 REMARK 3 1 D 58 D 58 1 REMARK 3 1 E 58 E 58 1 REMARK 3 1 F 58 F 58 1 REMARK 3 1 G 58 G 58 1 REMARK 3 1 H 58 H 58 1 REMARK 3 1 J 58 J 58 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 B (A): 17 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 17 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 17 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 E (A): 17 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 F (A): 17 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 G (A): 17 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 H (A): 17 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 J (A): 17 ; 0.05 ; 0.05 REMARK 3 TIGHT THERMAL 2 B (A**2): 17 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 17 ; 0.06 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 17 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 2 E (A**2): 17 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 2 F (A**2): 17 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 2 G (A**2): 17 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 2 H (A**2): 17 ; 0.11 ; 0.50 REMARK 3 TIGHT THERMAL 2 J (A**2): 17 ; 0.22 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): -25.7048 60.7332 39.4554 REMARK 3 T TENSOR REMARK 3 T11: 0.2001 T22: 0.3165 REMARK 3 T33: 0.2350 T12: -0.1304 REMARK 3 T13: -0.0283 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: -0.7302 L22: -0.1167 REMARK 3 L33: 2.4582 L12: -1.6351 REMARK 3 L13: 0.7606 L23: -1.0100 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: -0.3626 S13: 0.1141 REMARK 3 S21: 0.1642 S22: -0.0840 S23: -0.2416 REMARK 3 S31: -0.4524 S32: 0.3049 S33: 0.1642 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 69 REMARK 3 ORIGIN FOR THE GROUP (A): -27.6891 74.4806 23.9730 REMARK 3 T TENSOR REMARK 3 T11: 0.3576 T22: 0.1451 REMARK 3 T33: 0.3684 T12: -0.1303 REMARK 3 T13: 0.0046 T23: 0.0521 REMARK 3 L TENSOR REMARK 3 L11: -1.1085 L22: 0.0037 REMARK 3 L33: 0.9003 L12: 1.2862 REMARK 3 L13: 0.3743 L23: 1.0570 REMARK 3 S TENSOR REMARK 3 S11: -0.1562 S12: -0.2530 S13: 0.5695 REMARK 3 S21: -0.1385 S22: 0.2728 S23: 0.0705 REMARK 3 S31: -0.1594 S32: 0.1872 S33: -0.1167 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 69 REMARK 3 ORIGIN FOR THE GROUP (A): -21.4837 65.5292 6.2573 REMARK 3 T TENSOR REMARK 3 T11: 0.2973 T22: 0.3102 REMARK 3 T33: 0.2191 T12: -0.2219 REMARK 3 T13: 0.0242 T23: 0.0488 REMARK 3 L TENSOR REMARK 3 L11: 0.0677 L22: 5.1545 REMARK 3 L33: -1.0708 L12: 1.1866 REMARK 3 L13: 0.7958 L23: 0.3144 REMARK 3 S TENSOR REMARK 3 S11: -0.2499 S12: 0.3539 S13: 0.0642 REMARK 3 S21: -0.7377 S22: 0.3745 S23: -0.2536 REMARK 3 S31: -0.3314 S32: 0.2759 S33: -0.1246 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 69 REMARK 3 ORIGIN FOR THE GROUP (A): -15.4460 45.9955 10.7670 REMARK 3 T TENSOR REMARK 3 T11: 0.0302 T22: 0.3479 REMARK 3 T33: 0.2338 T12: -0.0739 REMARK 3 T13: -0.0508 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 2.9631 L22: 2.7768 REMARK 3 L33: 1.2022 L12: -1.3915 REMARK 3 L13: -2.4714 L23: -0.1156 REMARK 3 S TENSOR REMARK 3 S11: -0.1138 S12: 0.0716 S13: -0.1520 REMARK 3 S21: -0.1180 S22: 0.1920 S23: 0.0352 REMARK 3 S31: -0.0354 S32: 0.7210 S33: -0.0782 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 69 REMARK 3 ORIGIN FOR THE GROUP (A): -18.1876 43.1733 31.2617 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.2278 REMARK 3 T33: 0.3142 T12: -0.0482 REMARK 3 T13: -0.0799 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.4362 L22: 0.9456 REMARK 3 L33: -0.1247 L12: -0.1931 REMARK 3 L13: 0.3058 L23: -0.3252 REMARK 3 S TENSOR REMARK 3 S11: -0.0386 S12: -0.0631 S13: -0.1208 REMARK 3 S21: 0.2078 S22: 0.1128 S23: -0.4787 REMARK 3 S31: -0.0153 S32: 0.1725 S33: -0.0742 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 69 REMARK 3 ORIGIN FOR THE GROUP (A): -56.0102 62.8483 19.7043 REMARK 3 T TENSOR REMARK 3 T11: 0.2725 T22: 0.3694 REMARK 3 T33: 0.3865 T12: -0.0973 REMARK 3 T13: -0.0700 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 0.8459 L22: 2.8788 REMARK 3 L33: 3.3536 L12: 1.3034 REMARK 3 L13: -0.1605 L23: -0.8037 REMARK 3 S TENSOR REMARK 3 S11: -0.2534 S12: 0.9102 S13: 0.0861 REMARK 3 S21: -0.6058 S22: 0.2570 S23: 0.4727 REMARK 3 S31: -0.0064 S32: -0.3461 S33: -0.0035 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1 G 69 REMARK 3 ORIGIN FOR THE GROUP (A): -64.2209 81.5108 24.1670 REMARK 3 T TENSOR REMARK 3 T11: 0.3880 T22: 0.3591 REMARK 3 T33: 0.9565 T12: -0.0378 REMARK 3 T13: -0.0392 T23: 0.2289 REMARK 3 L TENSOR REMARK 3 L11: 1.9054 L22: 0.5495 REMARK 3 L33: 4.6793 L12: -0.8088 REMARK 3 L13: 1.1851 L23: -1.0164 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: 0.5597 S13: 1.0675 REMARK 3 S21: -0.0189 S22: 0.3325 S23: 0.6649 REMARK 3 S31: -0.4517 S32: -0.4333 S33: -0.4326 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 69 REMARK 3 ORIGIN FOR THE GROUP (A): -66.3694 82.4868 44.8406 REMARK 3 T TENSOR REMARK 3 T11: 0.5777 T22: 0.4886 REMARK 3 T33: 1.0232 T12: 0.1096 REMARK 3 T13: 0.0341 T23: -0.3360 REMARK 3 L TENSOR REMARK 3 L11: 3.1467 L22: -1.2202 REMARK 3 L33: 0.6231 L12: 0.7608 REMARK 3 L13: 0.4259 L23: -0.8524 REMARK 3 S TENSOR REMARK 3 S11: -0.1191 S12: -0.6526 S13: 1.2027 REMARK 3 S21: 0.0645 S22: 0.0138 S23: 0.1072 REMARK 3 S31: -0.5225 S32: -0.4867 S33: 0.1053 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 69 REMARK 3 ORIGIN FOR THE GROUP (A): -59.2953 64.5454 52.8838 REMARK 3 T TENSOR REMARK 3 T11: 0.3876 T22: 0.7246 REMARK 3 T33: 0.2154 T12: -0.1049 REMARK 3 T13: 0.0012 T23: -0.2493 REMARK 3 L TENSOR REMARK 3 L11: 3.4416 L22: -0.6906 REMARK 3 L33: 1.4120 L12: -0.5310 REMARK 3 L13: -0.5321 L23: 1.4056 REMARK 3 S TENSOR REMARK 3 S11: 0.1054 S12: -0.9797 S13: 0.7666 REMARK 3 S21: 0.3081 S22: -0.1994 S23: 0.3420 REMARK 3 S31: -0.1824 S32: -0.1507 S33: 0.0940 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 1 J 69 REMARK 3 ORIGIN FOR THE GROUP (A): -52.8110 52.3542 37.3868 REMARK 3 T TENSOR REMARK 3 T11: 0.1073 T22: 0.3205 REMARK 3 T33: 0.2037 T12: -0.0584 REMARK 3 T13: -0.0062 T23: -0.0707 REMARK 3 L TENSOR REMARK 3 L11: 1.3721 L22: 2.4450 REMARK 3 L33: -0.0777 L12: 0.9364 REMARK 3 L13: -0.8364 L23: 0.0368 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.3398 S13: -0.1121 REMARK 3 S21: -0.1803 S22: 0.0028 S23: 0.3468 REMARK 3 S31: 0.0402 S32: -0.1410 S33: -0.0151 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REFLECTIONS FOR INCLUSION IN THE TEST SET WERE CHOSEN REMARK 3 IN THIN RESOLUTION SHELLS TO MITIGATE THE HIGH DEGREE OF NCS. REMARK 4 REMARK 4 2C5C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1290026151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 196254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.860 REMARK 200 RESOLUTION RANGE LOW (A) : 24.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.77000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1QNU REMARK 200 REMARK 200 REMARK: 1QNU WAS STRIPPED OF LIGANDS PRIOR TO INPUT AS THE MR REMARK 200 SEARCH MODEL. ALTHOUGH THE HIGH RESOLUTION DATA HAVE POOR REMARK 200 STATISTICS, AN ANALYSIS OF SIGMAA VALUES INDICATED A SIGNIFICANT REMARK 200 CORRELATION OF MODEL AND DATA UP TO THE CUT- OFF IMPOSED. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% SATURATED AMMONIUM SULFATE, 2% REMARK 280 MPD, 200 MM NACL, 100 MM HEPES [PH 6.5], PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 57.15650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.99932 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 135.64533 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 57.15650 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.99932 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 135.64533 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 57.15650 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.99932 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 135.64533 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 57.15650 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.99932 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 135.64533 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 57.15650 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.99932 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 135.64533 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 57.15650 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.99932 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 135.64533 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.99864 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 271.29067 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 65.99864 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 271.29067 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 65.99864 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 271.29067 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 65.99864 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 271.29067 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 65.99864 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 271.29067 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 65.99864 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 271.29067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, K, L, M, N, O, REMARK 350 AND CHAINS: P, Q, R, S, T, U, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H, I, J, W, X, Y, Z, a, REMARK 350 AND CHAINS: b, c, d REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C7 S10 D1075 LIES ON A SPECIAL POSITION. REMARK 375 C7 S10 I1075 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 I1076 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 B-CHAIN IS RESPONSIBLE FOR BINDING THE HOLOTOXIN TO REMARK 400 SPECIFIC RECEPTORS ON THE TARGET CELL SURFACE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 GAL O 2 C12 S10 F 1073 2.08 REMARK 500 OD2 ASP F 17 O3 GLC M 1 2.13 REMARK 500 O4 GLC c 1 C2 GAL c 2 2.14 REMARK 500 OH TYR E 11 OE2 GLU E 28 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 42 CB SER B 42 OG -0.079 REMARK 500 VAL D 22 CB VAL D 22 CG2 -0.137 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 17 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 3 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP C 16 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP D 17 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP D 26 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP E 16 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP E 17 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP F 16 CB - CG - OD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ASP F 26 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 4 -55.52 -128.66 REMARK 500 ALA A 56 64.40 -103.44 REMARK 500 CYS A 57 57.20 -90.35 REMARK 500 CYS B 4 -55.74 -123.03 REMARK 500 ALA B 56 64.12 -100.33 REMARK 500 CYS C 4 -61.15 -123.40 REMARK 500 ALA C 56 63.96 -102.92 REMARK 500 CYS D 4 -62.81 -123.81 REMARK 500 ALA D 56 64.48 -101.94 REMARK 500 CYS E 4 -64.54 -120.92 REMARK 500 ASP E 18 16.96 57.67 REMARK 500 CYS F 4 -60.95 -125.01 REMARK 500 ASP F 17 30.32 -97.73 REMARK 500 ASP F 18 18.17 52.49 REMARK 500 CYS G 4 -60.35 -123.86 REMARK 500 ASP G 18 17.48 58.29 REMARK 500 CYS H 4 -61.84 -126.03 REMARK 500 CYS I 4 -56.64 -126.89 REMARK 500 ASP I 18 18.47 58.25 REMARK 500 ALA I 56 64.20 -101.19 REMARK 500 CYS J 4 -59.03 -126.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GLA P 1 REMARK 610 GLA R 1 REMARK 610 GLA U 1 REMARK 610 GLA W 1 REMARK 610 GLA X 1 REMARK 610 GLA Z 1 REMARK 610 GLA C 1070 REMARK 610 S10 E 1075 REMARK 610 S10 F 1073 REMARK 610 S10 J 1077 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 999 REMARK 999 SEQUENCE REMARK 999 PROTEIN IS SYNTHESISED WITH A 20 RESIDUE LEADER SEQUENCE REMARK 999 WHICH IS POST-TRANSLATIONALLY CLEAVED. DBREF 2C5C A 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C B 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C C 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C D 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C E 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C F 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C G 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C H 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C I 1 69 UNP P69179 SLTB_BPH19 21 89 DBREF 2C5C J 1 69 UNP P69179 SLTB_BPH19 21 89 SEQRES 1 A 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 A 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 A 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 A 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 A 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 A 69 VAL ILE PHE ARG SEQRES 1 B 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 B 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 B 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 B 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 B 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 B 69 VAL ILE PHE ARG SEQRES 1 C 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 C 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 C 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 C 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 C 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 C 69 VAL ILE PHE ARG SEQRES 1 D 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 D 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 D 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 D 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 D 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 D 69 VAL ILE PHE ARG SEQRES 1 E 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 E 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 E 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 E 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 E 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 E 69 VAL ILE PHE ARG SEQRES 1 F 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 F 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 F 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 F 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 F 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 F 69 VAL ILE PHE ARG SEQRES 1 G 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 G 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 G 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 G 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 G 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 G 69 VAL ILE PHE ARG SEQRES 1 H 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 H 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 H 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 H 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 H 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 H 69 VAL ILE PHE ARG SEQRES 1 I 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 I 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 I 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 I 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 I 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 I 69 VAL ILE PHE ARG SEQRES 1 J 69 THR PRO ASP CYS VAL THR GLY LYS VAL GLU TYR THR LYS SEQRES 2 J 69 TYR ASN ASP ASP ASP THR PHE THR VAL LYS VAL GLY ASP SEQRES 3 J 69 LYS GLU LEU PHE THR ASN ARG TRP ASN LEU GLN SER LEU SEQRES 4 J 69 LEU LEU SER ALA GLN ILE THR GLY MET THR VAL THR ILE SEQRES 5 J 69 LYS THR ASN ALA CYS HIS ASN GLY GLY GLY PHE SER GLU SEQRES 6 J 69 VAL ILE PHE ARG HET GLC K 1 12 HET GAL K 2 11 HET GLA K 3 11 HET GLC L 1 12 HET GAL L 2 11 HET GLA L 3 11 HET GLC M 1 12 HET GAL M 2 11 HET GLA M 3 11 HET GLC N 1 12 HET GAL N 2 11 HET GLA N 3 11 HET GLC O 1 12 HET GAL O 2 11 HET GLA O 3 11 HET GLA P 1 11 HET GLA P 2 11 HET GLC Q 1 12 HET GAL Q 2 11 HET GLA Q 3 11 HET GLA R 1 11 HET GLA R 2 11 HET BGC S 1 12 HET GAL S 2 11 HET GLA S 3 11 HET BGC T 1 12 HET GAL T 2 11 HET GLA T 3 11 HET GLA U 1 11 HET GLA U 2 11 HET GLC V 1 12 HET GAL V 2 11 HET GLA V 3 11 HET GLA W 1 11 HET GLA W 2 11 HET GLA X 1 11 HET GLA X 2 11 HET GLC Y 1 12 HET GAL Y 2 11 HET GLA Y 3 11 HET GLA Z 1 11 HET GLA Z 2 11 HET BGC a 1 12 HET GLA a 2 11 HET GLA a 3 11 HET BGC b 1 12 HET GLA b 2 11 HET GLA b 3 11 HET GLC c 1 12 HET GAL c 2 11 HET GLA c 3 11 HET GLC d 1 12 HET GAL d 2 11 HET GLA d 3 11 HET S10 A1076 15 HET GLA C1070 11 HET S10 C1073 15 HET S10 D1075 15 HET S10 E1075 5 HET S10 F1073 9 HET S10 I1075 15 HET SO4 I1076 5 HET S10 J1076 15 HET S10 J1077 5 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM S10 DIETHYL PROPANE-1,3-DIYLBISCARBAMATE HETNAM SO4 SULFATE ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 11 GLC 10(C6 H12 O6) FORMUL 11 GAL 12(C6 H12 O6) FORMUL 11 GLA 29(C6 H12 O6) FORMUL 19 BGC 4(C6 H12 O6) FORMUL 31 S10 8(C9 H18 N2 O4) FORMUL 38 SO4 O4 S 2- FORMUL 41 HOH *18(H2 O) HELIX 1 1 ASN A 35 GLY A 47 1 13 HELIX 2 2 ASN B 35 GLY B 47 1 13 HELIX 3 3 ASN C 35 GLY C 47 1 13 HELIX 4 4 ARG D 33 ASN D 35 5 3 HELIX 5 5 LEU D 36 GLY D 47 1 12 HELIX 6 6 ASN E 35 GLY E 47 1 13 HELIX 7 7 ASN F 35 GLY F 47 1 13 HELIX 8 8 ARG G 33 ASN G 35 5 3 HELIX 9 9 LEU G 36 THR G 46 1 11 HELIX 10 10 ASN H 35 GLY H 47 1 13 HELIX 11 11 ASN I 35 GLY I 47 1 13 HELIX 12 12 ASN J 35 GLY J 47 1 13 SHEET 1 AA 7 GLY A 61 GLY A 62 0 SHEET 2 AA 7 LYS A 27 THR A 31 1 N PHE A 30 O GLY A 61 SHEET 3 AA 7 PHE A 20 VAL A 24 -1 O PHE A 20 N THR A 31 SHEET 4 AA 7 ASP A 3 TYR A 14 -1 N GLU A 10 O LYS A 23 SHEET 5 AA 7 THR A 49 LYS A 53 -1 O VAL A 50 N GLY A 7 SHEET 6 AA 7 GLU A 65 ARG A 69 -1 O GLU A 65 N LYS A 53 SHEET 7 AA 7 ASP B 3 TYR B 14 -1 O THR B 12 N PHE A 68 SHEET 1 AB 7 GLY A 61 GLY A 62 0 SHEET 2 AB 7 LYS A 27 THR A 31 1 N PHE A 30 O GLY A 61 SHEET 3 AB 7 PHE A 20 VAL A 24 -1 O PHE A 20 N THR A 31 SHEET 4 AB 7 ASP A 3 TYR A 14 -1 N GLU A 10 O LYS A 23 SHEET 5 AB 7 GLU E 65 ARG E 69 -1 O VAL E 66 N TYR A 14 SHEET 6 AB 7 THR E 49 LYS E 53 1 O THR E 49 N ARG E 69 SHEET 7 AB 7 ASP E 3 TYR E 14 -1 N CYS E 4 O ILE E 52 SHEET 1 FA 6 LYS F 27 THR F 31 0 SHEET 2 FA 6 PHE F 20 VAL F 24 -1 O PHE F 20 N THR F 31 SHEET 3 FA 6 ASP F 3 TYR F 14 -1 N GLU F 10 O LYS F 23 SHEET 4 FA 6 THR F 49 LYS F 53 -1 O VAL F 50 N GLY F 7 SHEET 5 FA 6 GLU F 65 ARG F 69 -1 O GLU F 65 N LYS F 53 SHEET 6 FA 6 ASP G 3 TYR G 14 -1 O THR G 12 N PHE F 68 SHEET 1 FB 6 LYS F 27 THR F 31 0 SHEET 2 FB 6 PHE F 20 VAL F 24 -1 O PHE F 20 N THR F 31 SHEET 3 FB 6 ASP F 3 TYR F 14 -1 N GLU F 10 O LYS F 23 SHEET 4 FB 6 GLU J 65 ARG J 69 -1 O VAL J 66 N TYR F 14 SHEET 5 FB 6 THR J 49 LYS J 53 1 O THR J 49 N ARG J 69 SHEET 6 FB 6 ASP J 3 TYR J 14 -1 N CYS J 4 O ILE J 52 SSBOND 1 CYS A 4 CYS A 57 1555 1555 2.08 SSBOND 2 CYS B 4 CYS B 57 1555 1555 2.03 SSBOND 3 CYS C 4 CYS C 57 1555 1555 2.11 SSBOND 4 CYS D 4 CYS D 57 1555 1555 2.05 SSBOND 5 CYS E 4 CYS E 57 1555 1555 2.10 SSBOND 6 CYS F 4 CYS F 57 1555 1555 2.11 SSBOND 7 CYS G 4 CYS G 57 1555 1555 2.03 SSBOND 8 CYS H 4 CYS H 57 1555 1555 2.10 SSBOND 9 CYS I 4 CYS I 57 1555 1555 2.02 SSBOND 10 CYS J 4 CYS J 57 1555 1555 2.13 LINK C13 S10 A1076 O2 GAL K 2 1555 1555 1.41 LINK C1 S10 A1076 O2 GLA U 1 1555 1555 1.44 LINK C13 S10 C1073 O2 GLA P 1 1555 1555 1.45 LINK C1 S10 C1073 O2 GAL Q 2 1555 1555 1.42 LINK C13AS10 D1075 O2 AGAL S 2 1555 1555 1.45 LINK C1 AS10 D1075 O2 AGAL S 2 6555 1555 1.45 LINK C13 S10 E1075 O2 GAL V 2 1555 1555 1.50 LINK C13 S10 F1073 O2 GAL O 2 1555 1555 1.47 LINK C13 S10 I1075 O2 AGLA a 2 1555 1555 1.44 LINK C1 S10 I1075 O2 AGLA a 2 11565 1555 1.44 LINK C1 S10 I1075 O2 BGLA b 2 1555 1555 1.44 LINK C13 S10 I1075 O2 BGLA b 2 1555 11565 1.44 LINK C1 S10 J1076 O2 GAL L 2 1555 1555 1.44 LINK C13 S10 J1076 O2 GAL d 2 1555 1555 1.48 LINK C13 S10 J1077 O2 GAL c 2 1555 1555 1.47 LINK O4 GLC K 1 C1 GAL K 2 1555 1555 1.48 LINK O4 GAL K 2 C1 GLA K 3 1555 1555 1.47 LINK O4 GLC L 1 C1 GAL L 2 1555 1555 1.45 LINK O4 GAL L 2 C1 GLA L 3 1555 1555 1.44 LINK O4 GLC M 1 C1 GAL M 2 1555 1555 1.46 LINK O4 GAL M 2 C1 GLA M 3 1555 1555 1.51 LINK O4 GLC N 1 C1 GAL N 2 1555 1555 1.41 LINK O4 GAL N 2 C1 GLA N 3 1555 1555 1.46 LINK O4 GLC O 1 C1 GAL O 2 1555 1555 1.48 LINK O4 GAL O 2 C1 GLA O 3 1555 1555 1.46 LINK O4 GLA P 1 C1 GLA P 2 1555 1555 1.47 LINK O4 GLC Q 1 C1 GAL Q 2 1555 1555 1.43 LINK O4 GAL Q 2 C1 GLA Q 3 1555 1555 1.44 LINK O4 GLA R 1 C1 GLA R 2 1555 1555 1.52 LINK O4 ABGC S 1 C1 AGAL S 2 1555 1555 1.45 LINK O4 AGAL S 2 C1 AGLA S 3 1555 1555 1.42 LINK O4 BBGC T 1 C1 BGAL T 2 1555 1555 1.45 LINK O4 BGAL T 2 C1 BGLA T 3 1555 1555 1.42 LINK O4 GLA U 1 C1 GLA U 2 1555 1555 1.45 LINK O4 GLC V 1 C1 GAL V 2 1555 1555 1.43 LINK O4 GAL V 2 C1 GLA V 3 1555 1555 1.46 LINK O4 GLA W 1 C1 GLA W 2 1555 1555 1.51 LINK O4 GLA X 1 C1 GLA X 2 1555 1555 1.49 LINK O4 GLC Y 1 C1 GAL Y 2 1555 1555 1.44 LINK O4 GAL Y 2 C1 GLA Y 3 1555 1555 1.49 LINK O4 GLA Z 1 C1 GLA Z 2 1555 1555 1.51 LINK O4 ABGC a 1 C1 AGLA a 2 1555 1555 1.45 LINK O4 AGLA a 2 C1 AGLA a 3 1555 1555 1.43 LINK O4 BBGC b 1 C1 BGLA b 2 1555 1555 1.45 LINK O4 BGLA b 2 C1 BGLA b 3 1555 1555 1.43 LINK O4 GLC c 1 C1 GAL c 2 1555 1555 1.44 LINK O4 GAL c 2 C1 GLA c 3 1555 1555 1.50 LINK O4 GLC d 1 C1 GAL d 2 1555 1555 1.43 LINK O4 GAL d 2 C1 GLA d 3 1555 1555 1.46 CRYST1 114.313 114.313 406.936 90.00 90.00 120.00 H 3 2 180 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008748 0.005051 0.000000 0.00000 SCALE2 0.000000 0.010101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002457 0.00000 MTRIX1 1 0.911660 0.046830 0.408270 -13.75100 1 MTRIX2 1 0.362730 0.375240 -0.853010 63.27806 1 MTRIX3 1 -0.193140 0.925740 0.325110 -42.65457 1 MTRIX1 2 0.769740 0.440270 0.462240 -40.90538 1 MTRIX2 2 0.631660 -0.629950 -0.451860 118.40041 1 MTRIX3 2 0.092250 0.639790 -0.762990 4.29065 1 MTRIX1 3 0.762830 0.639900 0.092810 -44.36223 1 MTRIX2 3 0.438420 -0.617370 0.653170 88.89023 1 MTRIX3 3 0.475270 -0.457570 -0.751500 75.94060 1 MTRIX1 4 0.911900 0.365090 -0.187480 -19.03626 1 MTRIX2 4 0.032100 0.391970 0.919420 15.66436 1 MTRIX3 4 0.409160 -0.844430 0.345710 72.56673 1 MTRIX1 5 -0.813520 -0.520740 0.258870 -43.62953 1 MTRIX2 5 -0.571280 0.632360 -0.523230 -0.70352 1 MTRIX3 5 0.108770 -0.573540 -0.811920 97.60992 1 MTRIX1 6 -0.713200 -0.690060 -0.123140 -12.31191 1 MTRIX2 6 -0.615220 0.532040 0.581750 -36.22935 1 MTRIX3 6 -0.335930 0.490670 -0.803990 -2.66696 1 MTRIX1 7 -0.808370 -0.402160 -0.429890 -26.87077 1 MTRIX2 7 -0.212090 -0.482260 0.849960 48.38424 1 MTRIX3 7 -0.549140 0.778260 0.304550 -74.84479 1 MTRIX1 8 -0.971410 -0.061170 -0.229390 -67.21110 1 MTRIX2 8 0.085160 -0.991710 -0.096200 134.93152 1 MTRIX3 8 -0.221600 -0.112990 0.968570 -17.59924 1 MTRIX1 9 -0.969530 -0.143180 0.198750 -76.84586 1 MTRIX2 9 -0.146280 -0.312400 -0.938620 104.46944 1 MTRIX3 9 0.196480 -0.939100 0.281940 88.46944 1