data_2C9Y # _entry.id 2C9Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2C9Y pdb_00002c9y 10.2210/pdb2c9y/pdb PDBE EBI-26855 ? ? WWPDB D_1290026855 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2018-02-28 5 'Structure model' 1 4 2023-12-13 6 'Structure model' 1 5 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Source and taxonomy' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' citation_author 3 4 'Structure model' entity_src_gen 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_database_status 8 5 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 3 'Structure model' '_citation_author.name' 3 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 4 4 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 5 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 6 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' 9 5 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2C9Y _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-12-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bunkoczi, G.' 1 ? 'Filippakopoulos, P.' 2 ? 'Debreczeni, J.E.' 3 ? 'Turnbull, A.' 4 ? 'Papagrigoriou, E.' 5 ? 'Savitsky, P.' 6 ? 'Colebrook, S.' 7 ? 'von Delft, F.' 8 ? 'Arrowsmith, C.' 9 ? 'Edwards, A.' 10 ? 'Sundstrom, M.' 11 ? 'Weigelt, J.' 12 ? 'Knapp, S.' 13 ? # _citation.id primary _citation.title 'Structure of Human Adenylate Kinase 2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bunkoczi, G.' 1 ? primary 'Filippakopoulos, P.' 2 ? primary 'Debreczeni, J.E.' 3 ? primary 'Turnbull, A.' 4 ? primary 'Papagrigoriou, E.' 5 ? primary 'Savitsky, P.' 6 ? primary 'Colebrook, S.' 7 ? primary 'von Delft, F.' 8 ? primary 'Arrowsmith, C.' 9 ? primary 'Edwards, A.' 10 ? primary 'Sundstrom, M.' 11 ? primary 'Weigelt, J.' 12 ? primary 'Knapp, S.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADENYLATE KINASE ISOENZYME 2, MITOCHONDRIAL' 26845.176 1 2.7.4.3 ? ? ? 2 non-polymer syn "BIS(ADENOSINE)-5'-TETRAPHOSPHATE" 836.387 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 151 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ATP-AMP TRANSPHOSPHORYLASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV VELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPP KEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI LQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SMAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV VELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPP KEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI LQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "BIS(ADENOSINE)-5'-TETRAPHOSPHATE" B4P 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 PRO n 1 5 SER n 1 6 VAL n 1 7 PRO n 1 8 ALA n 1 9 ALA n 1 10 GLU n 1 11 PRO n 1 12 GLU n 1 13 TYR n 1 14 PRO n 1 15 LYS n 1 16 GLY n 1 17 ILE n 1 18 ARG n 1 19 ALA n 1 20 VAL n 1 21 LEU n 1 22 LEU n 1 23 GLY n 1 24 PRO n 1 25 PRO n 1 26 GLY n 1 27 ALA n 1 28 GLY n 1 29 LYS n 1 30 GLY n 1 31 THR n 1 32 GLN n 1 33 ALA n 1 34 PRO n 1 35 ARG n 1 36 LEU n 1 37 ALA n 1 38 GLU n 1 39 ASN n 1 40 PHE n 1 41 CYS n 1 42 VAL n 1 43 CYS n 1 44 HIS n 1 45 LEU n 1 46 ALA n 1 47 THR n 1 48 GLY n 1 49 ASP n 1 50 MET n 1 51 LEU n 1 52 ARG n 1 53 ALA n 1 54 MET n 1 55 VAL n 1 56 ALA n 1 57 SER n 1 58 GLY n 1 59 SER n 1 60 GLU n 1 61 LEU n 1 62 GLY n 1 63 LYS n 1 64 LYS n 1 65 LEU n 1 66 LYS n 1 67 ALA n 1 68 THR n 1 69 MET n 1 70 ASP n 1 71 ALA n 1 72 GLY n 1 73 LYS n 1 74 LEU n 1 75 VAL n 1 76 SER n 1 77 ASP n 1 78 GLU n 1 79 MET n 1 80 VAL n 1 81 VAL n 1 82 GLU n 1 83 LEU n 1 84 ILE n 1 85 GLU n 1 86 LYS n 1 87 ASN n 1 88 LEU n 1 89 GLU n 1 90 THR n 1 91 PRO n 1 92 LEU n 1 93 CYS n 1 94 LYS n 1 95 ASN n 1 96 GLY n 1 97 PHE n 1 98 LEU n 1 99 LEU n 1 100 ASP n 1 101 GLY n 1 102 PHE n 1 103 PRO n 1 104 ARG n 1 105 THR n 1 106 VAL n 1 107 ARG n 1 108 GLN n 1 109 ALA n 1 110 GLU n 1 111 MET n 1 112 LEU n 1 113 ASP n 1 114 ASP n 1 115 LEU n 1 116 MET n 1 117 GLU n 1 118 LYS n 1 119 ARG n 1 120 LYS n 1 121 GLU n 1 122 LYS n 1 123 LEU n 1 124 ASP n 1 125 SER n 1 126 VAL n 1 127 ILE n 1 128 GLU n 1 129 PHE n 1 130 SER n 1 131 ILE n 1 132 PRO n 1 133 ASP n 1 134 SER n 1 135 LEU n 1 136 LEU n 1 137 ILE n 1 138 ARG n 1 139 ARG n 1 140 ILE n 1 141 THR n 1 142 GLY n 1 143 ARG n 1 144 LEU n 1 145 ILE n 1 146 HIS n 1 147 PRO n 1 148 LYS n 1 149 SER n 1 150 GLY n 1 151 ARG n 1 152 SER n 1 153 TYR n 1 154 HIS n 1 155 GLU n 1 156 GLU n 1 157 PHE n 1 158 ASN n 1 159 PRO n 1 160 PRO n 1 161 LYS n 1 162 GLU n 1 163 PRO n 1 164 MET n 1 165 LYS n 1 166 ASP n 1 167 ASP n 1 168 ILE n 1 169 THR n 1 170 GLY n 1 171 GLU n 1 172 PRO n 1 173 LEU n 1 174 ILE n 1 175 ARG n 1 176 ARG n 1 177 SER n 1 178 ASP n 1 179 ASP n 1 180 ASN n 1 181 GLU n 1 182 LYS n 1 183 ALA n 1 184 LEU n 1 185 LYS n 1 186 ILE n 1 187 ARG n 1 188 LEU n 1 189 GLN n 1 190 ALA n 1 191 TYR n 1 192 HIS n 1 193 THR n 1 194 GLN n 1 195 THR n 1 196 THR n 1 197 PRO n 1 198 LEU n 1 199 ILE n 1 200 GLU n 1 201 TYR n 1 202 TYR n 1 203 ARG n 1 204 LYS n 1 205 ARG n 1 206 GLY n 1 207 ILE n 1 208 HIS n 1 209 SER n 1 210 ALA n 1 211 ILE n 1 212 ASP n 1 213 ALA n 1 214 SER n 1 215 GLN n 1 216 THR n 1 217 PRO n 1 218 ASP n 1 219 VAL n 1 220 VAL n 1 221 PHE n 1 222 ALA n 1 223 SER n 1 224 ILE n 1 225 LEU n 1 226 ALA n 1 227 ALA n 1 228 PHE n 1 229 SER n 1 230 LYS n 1 231 ALA n 1 232 THR n 1 233 CYS n 1 234 LYS n 1 235 ASP n 1 236 LEU n 1 237 VAL n 1 238 MET n 1 239 PHE n 1 240 ILE n 1 241 LEU n 1 242 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PLIC-SGC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B4P non-polymer . "BIS(ADENOSINE)-5'-TETRAPHOSPHATE" ? 'C20 H28 N10 O19 P4' 836.387 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 ALA 3 2 ? ? ? A . n A 1 4 PRO 4 3 ? ? ? A . n A 1 5 SER 5 4 ? ? ? A . n A 1 6 VAL 6 5 ? ? ? A . n A 1 7 PRO 7 6 ? ? ? A . n A 1 8 ALA 8 7 ? ? ? A . n A 1 9 ALA 9 8 ? ? ? A . n A 1 10 GLU 10 9 ? ? ? A . n A 1 11 PRO 11 10 ? ? ? A . n A 1 12 GLU 12 11 ? ? ? A . n A 1 13 TYR 13 12 ? ? ? A . n A 1 14 PRO 14 13 ? ? ? A . n A 1 15 LYS 15 14 ? ? ? A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 ARG 18 17 17 ARG ARG A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 PRO 24 23 23 PRO PRO A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 GLN 32 31 31 GLN GLN A . n A 1 33 ALA 33 32 32 ALA ALA A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 ARG 35 34 34 ARG ARG A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 PHE 40 39 39 PHE PHE A . n A 1 41 CYS 41 40 40 CYS CYS A . n A 1 42 VAL 42 41 41 VAL VAL A . n A 1 43 CYS 43 42 42 CYS CYS A . n A 1 44 HIS 44 43 43 HIS HIS A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 ALA 46 45 45 ALA ALA A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 ASP 49 48 48 ASP ASP A . n A 1 50 MET 50 49 49 MET MET A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 ARG 52 51 51 ARG ARG A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 MET 54 53 53 MET MET A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 GLY 58 57 57 GLY GLY A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 LYS 63 62 62 LYS LYS A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 THR 68 67 67 THR THR A . n A 1 69 MET 69 68 68 MET MET A . n A 1 70 ASP 70 69 69 ASP ASP A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 SER 76 75 75 SER SER A . n A 1 77 ASP 77 76 76 ASP ASP A . n A 1 78 GLU 78 77 77 GLU GLU A . n A 1 79 MET 79 78 78 MET MET A . n A 1 80 VAL 80 79 79 VAL VAL A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 ILE 84 83 83 ILE ILE A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 LYS 86 85 85 LYS LYS A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 GLU 89 88 88 GLU GLU A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 PRO 91 90 90 PRO PRO A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 CYS 93 92 92 CYS CYS A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 ASN 95 94 94 ASN ASN A . n A 1 96 GLY 96 95 95 GLY GLY A . n A 1 97 PHE 97 96 96 PHE PHE A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 GLY 101 100 100 GLY GLY A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 THR 105 104 104 THR THR A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 GLN 108 107 107 GLN GLN A . n A 1 109 ALA 109 108 108 ALA ALA A . n A 1 110 GLU 110 109 109 GLU GLU A . n A 1 111 MET 111 110 110 MET MET A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 LEU 115 114 114 LEU LEU A . n A 1 116 MET 116 115 115 MET MET A . n A 1 117 GLU 117 116 116 GLU GLU A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 ARG 119 118 118 ARG ARG A . n A 1 120 LYS 120 119 119 LYS LYS A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 LYS 122 121 121 LYS LYS A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 ASP 124 123 123 ASP ASP A . n A 1 125 SER 125 124 124 SER SER A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 GLU 128 127 127 GLU GLU A . n A 1 129 PHE 129 128 128 PHE PHE A . n A 1 130 SER 130 129 129 SER SER A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 PRO 132 131 131 PRO PRO A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 SER 134 133 133 SER SER A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 LEU 136 135 135 LEU LEU A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 ARG 138 137 137 ARG ARG A . n A 1 139 ARG 139 138 138 ARG ARG A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 THR 141 140 140 THR THR A . n A 1 142 GLY 142 141 141 GLY GLY A . n A 1 143 ARG 143 142 142 ARG ARG A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 ILE 145 144 144 ILE ILE A . n A 1 146 HIS 146 145 145 HIS HIS A . n A 1 147 PRO 147 146 146 PRO PRO A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 SER 149 148 148 SER SER A . n A 1 150 GLY 150 149 149 GLY GLY A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 SER 152 151 151 SER SER A . n A 1 153 TYR 153 152 152 TYR TYR A . n A 1 154 HIS 154 153 153 HIS HIS A . n A 1 155 GLU 155 154 154 GLU GLU A . n A 1 156 GLU 156 155 155 GLU GLU A . n A 1 157 PHE 157 156 156 PHE PHE A . n A 1 158 ASN 158 157 157 ASN ASN A . n A 1 159 PRO 159 158 158 PRO PRO A . n A 1 160 PRO 160 159 159 PRO PRO A . n A 1 161 LYS 161 160 160 LYS LYS A . n A 1 162 GLU 162 161 161 GLU GLU A . n A 1 163 PRO 163 162 162 PRO PRO A . n A 1 164 MET 164 163 163 MET MET A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 ASP 166 165 165 ASP ASP A . n A 1 167 ASP 167 166 166 ASP ASP A . n A 1 168 ILE 168 167 167 ILE ILE A . n A 1 169 THR 169 168 168 THR THR A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 PRO 172 171 171 PRO PRO A . n A 1 173 LEU 173 172 172 LEU LEU A . n A 1 174 ILE 174 173 173 ILE ILE A . n A 1 175 ARG 175 174 174 ARG ARG A . n A 1 176 ARG 176 175 175 ARG ARG A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 ASP 178 177 177 ASP ASP A . n A 1 179 ASP 179 178 178 ASP ASP A . n A 1 180 ASN 180 179 179 ASN ASN A . n A 1 181 GLU 181 180 180 GLU GLU A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 LYS 185 184 184 LYS LYS A . n A 1 186 ILE 186 185 185 ILE ILE A . n A 1 187 ARG 187 186 186 ARG ARG A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 GLN 189 188 188 GLN GLN A . n A 1 190 ALA 190 189 189 ALA ALA A . n A 1 191 TYR 191 190 190 TYR TYR A . n A 1 192 HIS 192 191 191 HIS HIS A . n A 1 193 THR 193 192 192 THR THR A . n A 1 194 GLN 194 193 193 GLN GLN A . n A 1 195 THR 195 194 194 THR THR A . n A 1 196 THR 196 195 195 THR THR A . n A 1 197 PRO 197 196 196 PRO PRO A . n A 1 198 LEU 198 197 197 LEU LEU A . n A 1 199 ILE 199 198 198 ILE ILE A . n A 1 200 GLU 200 199 199 GLU GLU A . n A 1 201 TYR 201 200 200 TYR TYR A . n A 1 202 TYR 202 201 201 TYR TYR A . n A 1 203 ARG 203 202 202 ARG ARG A . n A 1 204 LYS 204 203 203 LYS LYS A . n A 1 205 ARG 205 204 204 ARG ARG A . n A 1 206 GLY 206 205 205 GLY GLY A . n A 1 207 ILE 207 206 206 ILE ILE A . n A 1 208 HIS 208 207 207 HIS HIS A . n A 1 209 SER 209 208 208 SER SER A . n A 1 210 ALA 210 209 209 ALA ALA A . n A 1 211 ILE 211 210 210 ILE ILE A . n A 1 212 ASP 212 211 211 ASP ASP A . n A 1 213 ALA 213 212 212 ALA ALA A . n A 1 214 SER 214 213 213 SER SER A . n A 1 215 GLN 215 214 214 GLN GLN A . n A 1 216 THR 216 215 215 THR THR A . n A 1 217 PRO 217 216 216 PRO PRO A . n A 1 218 ASP 218 217 217 ASP ASP A . n A 1 219 VAL 219 218 218 VAL VAL A . n A 1 220 VAL 220 219 219 VAL VAL A . n A 1 221 PHE 221 220 220 PHE PHE A . n A 1 222 ALA 222 221 221 ALA ALA A . n A 1 223 SER 223 222 222 SER SER A . n A 1 224 ILE 224 223 223 ILE ILE A . n A 1 225 LEU 225 224 224 LEU LEU A . n A 1 226 ALA 226 225 225 ALA ALA A . n A 1 227 ALA 227 226 226 ALA ALA A . n A 1 228 PHE 228 227 227 PHE PHE A . n A 1 229 SER 229 228 228 SER SER A . n A 1 230 LYS 230 229 229 LYS LYS A . n A 1 231 ALA 231 230 230 ALA ALA A . n A 1 232 THR 232 231 231 THR THR A . n A 1 233 CYS 233 232 232 CYS CYS A . n A 1 234 LYS 234 233 ? ? ? A . n A 1 235 ASP 235 234 ? ? ? A . n A 1 236 LEU 236 235 ? ? ? A . n A 1 237 VAL 237 236 ? ? ? A . n A 1 238 MET 238 237 ? ? ? A . n A 1 239 PHE 239 238 ? ? ? A . n A 1 240 ILE 240 239 ? ? ? A . n A 1 241 LEU 241 240 ? ? ? A . n A 1 242 GLN 242 241 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B4P 1 1233 1233 B4P B4P A . C 3 EDO 1 1234 1234 EDO EDO A . D 3 EDO 1 1235 1235 EDO EDO A . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . E 4 HOH 26 2026 2026 HOH HOH A . E 4 HOH 27 2027 2027 HOH HOH A . E 4 HOH 28 2028 2028 HOH HOH A . E 4 HOH 29 2029 2029 HOH HOH A . E 4 HOH 30 2030 2030 HOH HOH A . E 4 HOH 31 2031 2031 HOH HOH A . E 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 33 2033 2033 HOH HOH A . E 4 HOH 34 2034 2034 HOH HOH A . E 4 HOH 35 2035 2035 HOH HOH A . E 4 HOH 36 2036 2036 HOH HOH A . E 4 HOH 37 2037 2037 HOH HOH A . E 4 HOH 38 2038 2038 HOH HOH A . E 4 HOH 39 2039 2039 HOH HOH A . E 4 HOH 40 2040 2040 HOH HOH A . E 4 HOH 41 2041 2041 HOH HOH A . E 4 HOH 42 2042 2042 HOH HOH A . E 4 HOH 43 2043 2043 HOH HOH A . E 4 HOH 44 2044 2044 HOH HOH A . E 4 HOH 45 2045 2045 HOH HOH A . E 4 HOH 46 2046 2046 HOH HOH A . E 4 HOH 47 2047 2047 HOH HOH A . E 4 HOH 48 2048 2048 HOH HOH A . E 4 HOH 49 2049 2049 HOH HOH A . E 4 HOH 50 2050 2050 HOH HOH A . E 4 HOH 51 2051 2051 HOH HOH A . E 4 HOH 52 2052 2052 HOH HOH A . E 4 HOH 53 2053 2053 HOH HOH A . E 4 HOH 54 2054 2054 HOH HOH A . E 4 HOH 55 2055 2055 HOH HOH A . E 4 HOH 56 2056 2056 HOH HOH A . E 4 HOH 57 2057 2057 HOH HOH A . E 4 HOH 58 2058 2058 HOH HOH A . E 4 HOH 59 2059 2059 HOH HOH A . E 4 HOH 60 2060 2060 HOH HOH A . E 4 HOH 61 2061 2061 HOH HOH A . E 4 HOH 62 2062 2062 HOH HOH A . E 4 HOH 63 2063 2063 HOH HOH A . E 4 HOH 64 2064 2064 HOH HOH A . E 4 HOH 65 2065 2065 HOH HOH A . E 4 HOH 66 2066 2066 HOH HOH A . E 4 HOH 67 2067 2067 HOH HOH A . E 4 HOH 68 2068 2068 HOH HOH A . E 4 HOH 69 2069 2069 HOH HOH A . E 4 HOH 70 2070 2070 HOH HOH A . E 4 HOH 71 2071 2071 HOH HOH A . E 4 HOH 72 2072 2072 HOH HOH A . E 4 HOH 73 2073 2073 HOH HOH A . E 4 HOH 74 2074 2074 HOH HOH A . E 4 HOH 75 2075 2075 HOH HOH A . E 4 HOH 76 2076 2076 HOH HOH A . E 4 HOH 77 2077 2077 HOH HOH A . E 4 HOH 78 2078 2078 HOH HOH A . E 4 HOH 79 2079 2079 HOH HOH A . E 4 HOH 80 2080 2080 HOH HOH A . E 4 HOH 81 2081 2081 HOH HOH A . E 4 HOH 82 2082 2082 HOH HOH A . E 4 HOH 83 2083 2083 HOH HOH A . E 4 HOH 84 2084 2084 HOH HOH A . E 4 HOH 85 2085 2085 HOH HOH A . E 4 HOH 86 2086 2086 HOH HOH A . E 4 HOH 87 2087 2087 HOH HOH A . E 4 HOH 88 2088 2088 HOH HOH A . E 4 HOH 89 2089 2089 HOH HOH A . E 4 HOH 90 2090 2090 HOH HOH A . E 4 HOH 91 2091 2091 HOH HOH A . E 4 HOH 92 2092 2092 HOH HOH A . E 4 HOH 93 2093 2093 HOH HOH A . E 4 HOH 94 2094 2094 HOH HOH A . E 4 HOH 95 2095 2095 HOH HOH A . E 4 HOH 96 2096 2096 HOH HOH A . E 4 HOH 97 2097 2097 HOH HOH A . E 4 HOH 98 2098 2098 HOH HOH A . E 4 HOH 99 2099 2099 HOH HOH A . E 4 HOH 100 2100 2100 HOH HOH A . E 4 HOH 101 2101 2101 HOH HOH A . E 4 HOH 102 2102 2102 HOH HOH A . E 4 HOH 103 2103 2103 HOH HOH A . E 4 HOH 104 2104 2104 HOH HOH A . E 4 HOH 105 2105 2105 HOH HOH A . E 4 HOH 106 2106 2106 HOH HOH A . E 4 HOH 107 2107 2107 HOH HOH A . E 4 HOH 108 2108 2108 HOH HOH A . E 4 HOH 109 2109 2109 HOH HOH A . E 4 HOH 110 2110 2110 HOH HOH A . E 4 HOH 111 2111 2111 HOH HOH A . E 4 HOH 112 2112 2112 HOH HOH A . E 4 HOH 113 2113 2113 HOH HOH A . E 4 HOH 114 2114 2114 HOH HOH A . E 4 HOH 115 2115 2115 HOH HOH A . E 4 HOH 116 2116 2116 HOH HOH A . E 4 HOH 117 2117 2117 HOH HOH A . E 4 HOH 118 2118 2118 HOH HOH A . E 4 HOH 119 2119 2119 HOH HOH A . E 4 HOH 120 2120 2120 HOH HOH A . E 4 HOH 121 2121 2121 HOH HOH A . E 4 HOH 122 2122 2122 HOH HOH A . E 4 HOH 123 2123 2123 HOH HOH A . E 4 HOH 124 2124 2124 HOH HOH A . E 4 HOH 125 2125 2125 HOH HOH A . E 4 HOH 126 2126 2126 HOH HOH A . E 4 HOH 127 2127 2127 HOH HOH A . E 4 HOH 128 2128 2128 HOH HOH A . E 4 HOH 129 2129 2129 HOH HOH A . E 4 HOH 130 2130 2130 HOH HOH A . E 4 HOH 131 2131 2131 HOH HOH A . E 4 HOH 132 2132 2132 HOH HOH A . E 4 HOH 133 2133 2133 HOH HOH A . E 4 HOH 134 2134 2134 HOH HOH A . E 4 HOH 135 2135 2135 HOH HOH A . E 4 HOH 136 2136 2136 HOH HOH A . E 4 HOH 137 2137 2137 HOH HOH A . E 4 HOH 138 2138 2138 HOH HOH A . E 4 HOH 139 2139 2139 HOH HOH A . E 4 HOH 140 2140 2140 HOH HOH A . E 4 HOH 141 2141 2141 HOH HOH A . E 4 HOH 142 2142 2142 HOH HOH A . E 4 HOH 143 2143 2143 HOH HOH A . E 4 HOH 144 2144 2144 HOH HOH A . E 4 HOH 145 2145 2145 HOH HOH A . E 4 HOH 146 2146 2146 HOH HOH A . E 4 HOH 147 2147 2147 HOH HOH A . E 4 HOH 148 2148 2148 HOH HOH A . E 4 HOH 149 2149 2149 HOH HOH A . E 4 HOH 150 2150 2150 HOH HOH A . E 4 HOH 151 2151 2151 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 63 ? CE ? A LYS 64 CE 2 1 Y 1 A LYS 63 ? NZ ? A LYS 64 NZ 3 1 Y 1 A LYS 72 ? CE ? A LYS 73 CE 4 1 Y 1 A LYS 72 ? NZ ? A LYS 73 NZ 5 1 Y 1 A ARG 103 ? NE ? A ARG 104 NE 6 1 Y 1 A ARG 103 ? CZ ? A ARG 104 CZ 7 1 Y 1 A ARG 103 ? NH1 ? A ARG 104 NH1 8 1 Y 1 A ARG 103 ? NH2 ? A ARG 104 NH2 9 1 Y 1 A ARG 142 ? NE ? A ARG 143 NE 10 1 Y 1 A ARG 142 ? CZ ? A ARG 143 CZ 11 1 Y 1 A ARG 142 ? NH1 ? A ARG 143 NH1 12 1 Y 1 A ARG 142 ? NH2 ? A ARG 143 NH2 13 1 Y 1 A LYS 181 ? CG ? A LYS 182 CG 14 1 Y 1 A LYS 181 ? CD ? A LYS 182 CD 15 1 Y 1 A LYS 181 ? CE ? A LYS 182 CE 16 1 Y 1 A LYS 181 ? NZ ? A LYS 182 NZ 17 1 Y 1 A LEU 183 ? CG ? A LEU 184 CG 18 1 Y 1 A LEU 183 ? CD1 ? A LEU 184 CD1 19 1 Y 1 A LEU 183 ? CD2 ? A LEU 184 CD2 20 1 Y 1 A GLN 193 ? CD ? A GLN 194 CD 21 1 Y 1 A GLN 193 ? OE1 ? A GLN 194 OE1 22 1 Y 1 A GLN 193 ? NE2 ? A GLN 194 NE2 23 1 Y 1 A LYS 229 ? CD ? A LYS 230 CD 24 1 Y 1 A LYS 229 ? CE ? A LYS 230 CE 25 1 Y 1 A LYS 229 ? NZ ? A LYS 230 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2C9Y _cell.length_a 45.042 _cell.length_b 49.260 _cell.length_c 127.001 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C9Y _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 2C9Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 52.5 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.70 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M BIS-TRIS PH=5.7, 28% PEG3350, pH 5.70' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-11-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI111 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979097 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 0.979097 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2C9Y _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 45.000 _reflns.d_resolution_high 2.100 _reflns.number_obs 17233 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.14000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.8000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.120 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.58000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.000 _reflns_shell.pdbx_redundancy 6.98 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2C9Y _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 16279 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.274 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 895 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.892 _refine.B_iso_mean 26.91 _refine.aniso_B[1][1] -0.92000 _refine.aniso_B[2][2] 0.70000 _refine.aniso_B[3][3] 0.22000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1AK2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.198 _refine.pdbx_overall_ESU_R_Free 0.202 _refine.overall_SU_ML 0.152 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.888 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1666 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 1878 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.022 ? 1821 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1276 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.768 2.056 ? 2470 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.998 3.001 ? 3118 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.840 5.000 ? 217 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.981 23.429 ? 70 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.996 15.000 ? 328 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.296 15.000 ? 15 'X-RAY DIFFRACTION' ? r_chiral_restr 0.091 0.200 ? 279 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1909 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 339 'X-RAY DIFFRACTION' ? r_nbd_refined 0.224 0.200 ? 395 'X-RAY DIFFRACTION' ? r_nbd_other 0.199 0.200 ? 1279 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.176 0.200 ? 848 'X-RAY DIFFRACTION' ? r_nbtor_other 0.090 0.200 ? 971 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.212 0.200 ? 126 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.184 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.255 0.200 ? 74 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.262 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.444 3.000 ? 1128 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.656 5.000 ? 1765 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 5.970 8.000 ? 789 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 8.215 11.000 ? 705 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.15 _refine_ls_shell.number_reflns_R_work 1194 _refine_ls_shell.R_factor_R_work 0.2220 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3560 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2C9Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2C9Y _struct.title 'Structure of human adenylate kinase 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2C9Y _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'NUCLEOTIDE KINASE, TRANSFERASE, NUCLEOTIDE-BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KAD2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P54819 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2C9Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 240 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P54819 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 239 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2C9Y SER A 1 ? UNP P54819 ? ? 'expression tag' 0 1 1 2C9Y LEU A 241 ? UNP P54819 ? ? 'expression tag' 240 2 1 2C9Y GLN A 242 ? UNP P54819 ? ? 'expression tag' 241 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 28 ? CYS A 41 ? GLY A 27 CYS A 40 1 ? 14 HELX_P HELX_P2 2 THR A 47 ? GLY A 58 ? THR A 46 GLY A 57 1 ? 12 HELX_P HELX_P3 3 SER A 59 ? ALA A 71 ? SER A 58 ALA A 70 1 ? 13 HELX_P HELX_P4 4 SER A 76 ? GLU A 89 ? SER A 75 GLU A 88 1 ? 14 HELX_P HELX_P5 5 THR A 90 ? LYS A 94 ? THR A 89 LYS A 93 5 ? 5 HELX_P HELX_P6 6 THR A 105 ? ARG A 119 ? THR A 104 ARG A 118 1 ? 15 HELX_P HELX_P7 7 PRO A 132 ? GLY A 142 ? PRO A 131 GLY A 141 1 ? 11 HELX_P HELX_P8 8 ASN A 180 ? ARG A 205 ? ASN A 179 ARG A 204 1 ? 26 HELX_P HELX_P9 9 THR A 216 ? THR A 232 ? THR A 215 THR A 231 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 43 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 93 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 42 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 92 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.058 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 43 _pdbx_modification_feature.label_alt_id A _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 93 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 42 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 92 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 102 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 101 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 103 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 102 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 CYS A 43 ? ALA A 46 ? CYS A 42 ALA A 45 AA 2 GLY A 96 ? ASP A 100 ? GLY A 95 ASP A 99 AA 3 ILE A 17 ? LEU A 22 ? ILE A 16 LEU A 21 AA 4 SER A 125 ? SER A 130 ? SER A 124 SER A 129 AA 5 HIS A 208 ? ASP A 212 ? HIS A 207 ASP A 211 AB 1 SER A 152 ? TYR A 153 ? SER A 151 TYR A 152 AB 2 LEU A 144 ? ILE A 145 ? LEU A 143 ILE A 144 AB 3 ILE A 174 ? ARG A 175 ? ILE A 173 ARG A 174 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N CYS A 43 ? N CYS A 42 O GLY A 96 ? O GLY A 95 AA 2 3 N PHE A 97 ? N PHE A 96 O ILE A 17 ? O ILE A 16 AA 3 4 N VAL A 20 ? N VAL A 19 O SER A 125 ? O SER A 124 AA 4 5 N GLU A 128 ? N GLU A 127 O SER A 209 ? O SER A 208 AB 1 2 N TYR A 153 ? N TYR A 152 O LEU A 144 ? O LEU A 143 AB 2 3 N ILE A 145 ? N ILE A 144 O ILE A 174 ? O ILE A 173 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 20 'BINDING SITE FOR RESIDUE B4P A1233' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A1234' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A1235' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 PRO A 25 ? PRO A 24 . ? 1_555 ? 2 AC1 20 GLY A 26 ? GLY A 25 . ? 1_555 ? 3 AC1 20 ALA A 27 ? ALA A 26 . ? 1_555 ? 4 AC1 20 GLY A 28 ? GLY A 27 . ? 1_555 ? 5 AC1 20 GLY A 30 ? GLY A 29 . ? 1_555 ? 6 AC1 20 THR A 31 ? THR A 30 . ? 1_555 ? 7 AC1 20 ARG A 139 ? ARG A 138 . ? 1_555 ? 8 AC1 20 ARG A 151 ? ARG A 150 . ? 1_555 ? 9 AC1 20 SER A 152 ? SER A 151 . ? 1_555 ? 10 AC1 20 PHE A 157 ? PHE A 156 . ? 1_555 ? 11 AC1 20 LYS A 161 ? LYS A 160 . ? 1_555 ? 12 AC1 20 ARG A 176 ? ARG A 175 . ? 1_555 ? 13 AC1 20 GLN A 215 ? GLN A 214 . ? 1_555 ? 14 AC1 20 THR A 216 ? THR A 215 . ? 1_555 ? 15 AC1 20 PRO A 217 ? PRO A 216 . ? 1_555 ? 16 AC1 20 HOH E . ? HOH A 2006 . ? 1_555 ? 17 AC1 20 HOH E . ? HOH A 2146 . ? 1_555 ? 18 AC1 20 HOH E . ? HOH A 2148 . ? 1_555 ? 19 AC1 20 HOH E . ? HOH A 2149 . ? 1_555 ? 20 AC1 20 HOH E . ? HOH A 2150 . ? 1_555 ? 21 AC2 8 LEU A 88 ? LEU A 87 . ? 1_555 ? 22 AC2 8 GLU A 89 ? GLU A 88 . ? 1_555 ? 23 AC2 8 THR A 90 ? THR A 89 . ? 1_555 ? 24 AC2 8 LYS A 94 ? LYS A 93 . ? 1_555 ? 25 AC2 8 ARG A 119 ? ARG A 118 . ? 1_555 ? 26 AC2 8 LYS A 204 ? LYS A 203 . ? 1_555 ? 27 AC2 8 ARG A 205 ? ARG A 204 . ? 1_555 ? 28 AC2 8 HOH E . ? HOH A 2079 . ? 1_555 ? 29 AC3 7 ASN A 39 ? ASN A 38 . ? 1_555 ? 30 AC3 7 ASP A 70 ? ASP A 69 . ? 1_555 ? 31 AC3 7 GLY A 72 ? GLY A 71 . ? 1_555 ? 32 AC3 7 ARG A 175 ? ARG A 174 . ? 1_555 ? 33 AC3 7 PHE A 221 ? PHE A 220 . ? 1_555 ? 34 AC3 7 HOH E . ? HOH A 2013 . ? 1_555 ? 35 AC3 7 HOH E . ? HOH A 2151 . ? 1_555 ? # _pdbx_entry_details.entry_id 2C9Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2021 ? ? O A HOH 2022 ? ? 2.00 2 1 O A HOH 2068 ? ? O A HOH 2072 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 51 ? ? CZ A ARG 51 ? ? NH1 A ARG 51 ? ? 124.28 120.30 3.98 0.50 N 2 1 NE A ARG 204 ? ? CZ A ARG 204 ? ? NH1 A ARG 204 ? ? 124.41 120.30 4.11 0.50 N 3 1 NE A ARG 204 ? ? CZ A ARG 204 ? ? NH2 A ARG 204 ? ? 117.11 120.30 -3.19 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 16 ? ? -172.94 149.35 2 1 THR A 140 ? ? -84.60 -77.63 3 1 ARG A 142 ? ? -59.52 174.27 4 1 ASN A 157 ? ? -161.43 55.91 5 1 THR A 168 ? ? -89.09 -157.85 6 1 ASP A 177 ? ? 79.69 144.66 7 1 ASN A 179 ? ? -47.39 104.65 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 1.8112 1.4327 -20.0821 -0.1109 -0.1303 -0.0814 -0.0205 0.0688 -0.0232 1.3116 1.2598 2.3033 -0.0516 0.2810 0.1630 0.1182 -0.2347 0.1076 -0.0672 -0.0512 -0.1459 0.1757 0.0780 -0.0670 'X-RAY DIFFRACTION' 2 ? refined -12.6883 13.4305 -24.2732 -0.0824 -0.0694 -0.0431 0.0402 0.0823 -0.0078 3.3917 1.1629 2.3004 -0.3455 -0.4904 0.6587 0.0957 -0.0487 0.2655 -0.0674 -0.0567 0.1324 -0.2722 -0.4708 -0.0390 'X-RAY DIFFRACTION' 3 ? refined -2.1294 6.6709 3.6530 -0.0277 0.1950 -0.0526 -0.0201 0.0259 -0.0573 1.2633 3.0007 2.7115 0.1537 0.1508 1.0672 -0.0249 -0.4814 0.2399 0.4494 0.0693 -0.1387 0.0772 -0.1359 -0.0443 'X-RAY DIFFRACTION' 4 ? refined 0.2811 9.1070 -3.3066 0.0031 0.1548 -0.0173 -0.0105 0.0443 -0.1409 0.7280 7.4232 1.9810 2.3246 -1.2009 -3.8348 0.1180 0.0101 0.0495 0.5159 -0.2853 0.6345 -0.0436 -0.0041 0.1673 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 15 ? ? A 41 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 94 ? ? A 130 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 193 ? ? A 232 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 A 42 ? ? A 93 ? ? ? ? 'X-RAY DIFFRACTION' 5 3 A 131 ? ? A 192 ? ? ? ? 'X-RAY DIFFRACTION' 6 4 A 1233 ? ? A 1233 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A ALA 2 ? A ALA 3 4 1 Y 1 A PRO 3 ? A PRO 4 5 1 Y 1 A SER 4 ? A SER 5 6 1 Y 1 A VAL 5 ? A VAL 6 7 1 Y 1 A PRO 6 ? A PRO 7 8 1 Y 1 A ALA 7 ? A ALA 8 9 1 Y 1 A ALA 8 ? A ALA 9 10 1 Y 1 A GLU 9 ? A GLU 10 11 1 Y 1 A PRO 10 ? A PRO 11 12 1 Y 1 A GLU 11 ? A GLU 12 13 1 Y 1 A TYR 12 ? A TYR 13 14 1 Y 1 A PRO 13 ? A PRO 14 15 1 Y 1 A LYS 14 ? A LYS 15 16 1 Y 1 A LYS 233 ? A LYS 234 17 1 Y 1 A ASP 234 ? A ASP 235 18 1 Y 1 A LEU 235 ? A LEU 236 19 1 Y 1 A VAL 236 ? A VAL 237 20 1 Y 1 A MET 237 ? A MET 238 21 1 Y 1 A PHE 238 ? A PHE 239 22 1 Y 1 A ILE 239 ? A ILE 240 23 1 Y 1 A LEU 240 ? A LEU 241 24 1 Y 1 A GLN 241 ? A GLN 242 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 B4P PA P N S 74 B4P O1A O N N 75 B4P O2A O N N 76 B4P O3A O N N 77 B4P PB P N S 78 B4P O1B O N N 79 B4P O2B O N N 80 B4P O3B O N N 81 B4P PG P N S 82 B4P O1G O N N 83 B4P O2G O N N 84 B4P O3G O N N 85 B4P PD P N S 86 B4P O1D O N N 87 B4P O2D O N N 88 B4P O5E O N N 89 B4P C5E C N N 90 B4P C4E C N R 91 B4P O4E O N N 92 B4P C3E C N S 93 B4P O3E O N N 94 B4P C2E C N R 95 B4P O2E O N N 96 B4P C1E C N R 97 B4P N9A N Y N 98 B4P C8A C Y N 99 B4P N7A N Y N 100 B4P C5A C Y N 101 B4P C6A C Y N 102 B4P N6A N N N 103 B4P N1A N Y N 104 B4P C2A C Y N 105 B4P N3A N Y N 106 B4P C4A C Y N 107 B4P O5F O N N 108 B4P C5F C N N 109 B4P C4F C N R 110 B4P O4F O N N 111 B4P C3F C N S 112 B4P O3F O N N 113 B4P C2F C N R 114 B4P O2F O N N 115 B4P C1F C N R 116 B4P N9B N Y N 117 B4P C8B C Y N 118 B4P N7B N Y N 119 B4P C5B C Y N 120 B4P C6B C Y N 121 B4P N6B N N N 122 B4P N1B N Y N 123 B4P C2B C Y N 124 B4P N3B N Y N 125 B4P C4B C Y N 126 B4P HOA2 H N N 127 B4P HOB2 H N N 128 B4P HOG2 H N N 129 B4P HOD2 H N N 130 B4P H51A H N N 131 B4P H52A H N N 132 B4P H4E H N N 133 B4P H3E H N N 134 B4P HO3A H N N 135 B4P H2E H N N 136 B4P HO2A H N N 137 B4P H1E H N N 138 B4P H8A H N N 139 B4P H61A H N N 140 B4P H62A H N N 141 B4P H2A H N N 142 B4P H51B H N N 143 B4P H52B H N N 144 B4P H4F H N N 145 B4P H3F H N N 146 B4P HO3B H N N 147 B4P H2F H N N 148 B4P HO2B H N N 149 B4P H1F H N N 150 B4P H8B H N N 151 B4P H61B H N N 152 B4P H62B H N N 153 B4P H2B H N N 154 CYS N N N N 155 CYS CA C N R 156 CYS C C N N 157 CYS O O N N 158 CYS CB C N N 159 CYS SG S N N 160 CYS OXT O N N 161 CYS H H N N 162 CYS H2 H N N 163 CYS HA H N N 164 CYS HB2 H N N 165 CYS HB3 H N N 166 CYS HG H N N 167 CYS HXT H N N 168 EDO C1 C N N 169 EDO O1 O N N 170 EDO C2 C N N 171 EDO O2 O N N 172 EDO H11 H N N 173 EDO H12 H N N 174 EDO HO1 H N N 175 EDO H21 H N N 176 EDO H22 H N N 177 EDO HO2 H N N 178 GLN N N N N 179 GLN CA C N S 180 GLN C C N N 181 GLN O O N N 182 GLN CB C N N 183 GLN CG C N N 184 GLN CD C N N 185 GLN OE1 O N N 186 GLN NE2 N N N 187 GLN OXT O N N 188 GLN H H N N 189 GLN H2 H N N 190 GLN HA H N N 191 GLN HB2 H N N 192 GLN HB3 H N N 193 GLN HG2 H N N 194 GLN HG3 H N N 195 GLN HE21 H N N 196 GLN HE22 H N N 197 GLN HXT H N N 198 GLU N N N N 199 GLU CA C N S 200 GLU C C N N 201 GLU O O N N 202 GLU CB C N N 203 GLU CG C N N 204 GLU CD C N N 205 GLU OE1 O N N 206 GLU OE2 O N N 207 GLU OXT O N N 208 GLU H H N N 209 GLU H2 H N N 210 GLU HA H N N 211 GLU HB2 H N N 212 GLU HB3 H N N 213 GLU HG2 H N N 214 GLU HG3 H N N 215 GLU HE2 H N N 216 GLU HXT H N N 217 GLY N N N N 218 GLY CA C N N 219 GLY C C N N 220 GLY O O N N 221 GLY OXT O N N 222 GLY H H N N 223 GLY H2 H N N 224 GLY HA2 H N N 225 GLY HA3 H N N 226 GLY HXT H N N 227 HIS N N N N 228 HIS CA C N S 229 HIS C C N N 230 HIS O O N N 231 HIS CB C N N 232 HIS CG C Y N 233 HIS ND1 N Y N 234 HIS CD2 C Y N 235 HIS CE1 C Y N 236 HIS NE2 N Y N 237 HIS OXT O N N 238 HIS H H N N 239 HIS H2 H N N 240 HIS HA H N N 241 HIS HB2 H N N 242 HIS HB3 H N N 243 HIS HD1 H N N 244 HIS HD2 H N N 245 HIS HE1 H N N 246 HIS HE2 H N N 247 HIS HXT H N N 248 HOH O O N N 249 HOH H1 H N N 250 HOH H2 H N N 251 ILE N N N N 252 ILE CA C N S 253 ILE C C N N 254 ILE O O N N 255 ILE CB C N S 256 ILE CG1 C N N 257 ILE CG2 C N N 258 ILE CD1 C N N 259 ILE OXT O N N 260 ILE H H N N 261 ILE H2 H N N 262 ILE HA H N N 263 ILE HB H N N 264 ILE HG12 H N N 265 ILE HG13 H N N 266 ILE HG21 H N N 267 ILE HG22 H N N 268 ILE HG23 H N N 269 ILE HD11 H N N 270 ILE HD12 H N N 271 ILE HD13 H N N 272 ILE HXT H N N 273 LEU N N N N 274 LEU CA C N S 275 LEU C C N N 276 LEU O O N N 277 LEU CB C N N 278 LEU CG C N N 279 LEU CD1 C N N 280 LEU CD2 C N N 281 LEU OXT O N N 282 LEU H H N N 283 LEU H2 H N N 284 LEU HA H N N 285 LEU HB2 H N N 286 LEU HB3 H N N 287 LEU HG H N N 288 LEU HD11 H N N 289 LEU HD12 H N N 290 LEU HD13 H N N 291 LEU HD21 H N N 292 LEU HD22 H N N 293 LEU HD23 H N N 294 LEU HXT H N N 295 LYS N N N N 296 LYS CA C N S 297 LYS C C N N 298 LYS O O N N 299 LYS CB C N N 300 LYS CG C N N 301 LYS CD C N N 302 LYS CE C N N 303 LYS NZ N N N 304 LYS OXT O N N 305 LYS H H N N 306 LYS H2 H N N 307 LYS HA H N N 308 LYS HB2 H N N 309 LYS HB3 H N N 310 LYS HG2 H N N 311 LYS HG3 H N N 312 LYS HD2 H N N 313 LYS HD3 H N N 314 LYS HE2 H N N 315 LYS HE3 H N N 316 LYS HZ1 H N N 317 LYS HZ2 H N N 318 LYS HZ3 H N N 319 LYS HXT H N N 320 MET N N N N 321 MET CA C N S 322 MET C C N N 323 MET O O N N 324 MET CB C N N 325 MET CG C N N 326 MET SD S N N 327 MET CE C N N 328 MET OXT O N N 329 MET H H N N 330 MET H2 H N N 331 MET HA H N N 332 MET HB2 H N N 333 MET HB3 H N N 334 MET HG2 H N N 335 MET HG3 H N N 336 MET HE1 H N N 337 MET HE2 H N N 338 MET HE3 H N N 339 MET HXT H N N 340 PHE N N N N 341 PHE CA C N S 342 PHE C C N N 343 PHE O O N N 344 PHE CB C N N 345 PHE CG C Y N 346 PHE CD1 C Y N 347 PHE CD2 C Y N 348 PHE CE1 C Y N 349 PHE CE2 C Y N 350 PHE CZ C Y N 351 PHE OXT O N N 352 PHE H H N N 353 PHE H2 H N N 354 PHE HA H N N 355 PHE HB2 H N N 356 PHE HB3 H N N 357 PHE HD1 H N N 358 PHE HD2 H N N 359 PHE HE1 H N N 360 PHE HE2 H N N 361 PHE HZ H N N 362 PHE HXT H N N 363 PRO N N N N 364 PRO CA C N S 365 PRO C C N N 366 PRO O O N N 367 PRO CB C N N 368 PRO CG C N N 369 PRO CD C N N 370 PRO OXT O N N 371 PRO H H N N 372 PRO HA H N N 373 PRO HB2 H N N 374 PRO HB3 H N N 375 PRO HG2 H N N 376 PRO HG3 H N N 377 PRO HD2 H N N 378 PRO HD3 H N N 379 PRO HXT H N N 380 SER N N N N 381 SER CA C N S 382 SER C C N N 383 SER O O N N 384 SER CB C N N 385 SER OG O N N 386 SER OXT O N N 387 SER H H N N 388 SER H2 H N N 389 SER HA H N N 390 SER HB2 H N N 391 SER HB3 H N N 392 SER HG H N N 393 SER HXT H N N 394 THR N N N N 395 THR CA C N S 396 THR C C N N 397 THR O O N N 398 THR CB C N R 399 THR OG1 O N N 400 THR CG2 C N N 401 THR OXT O N N 402 THR H H N N 403 THR H2 H N N 404 THR HA H N N 405 THR HB H N N 406 THR HG1 H N N 407 THR HG21 H N N 408 THR HG22 H N N 409 THR HG23 H N N 410 THR HXT H N N 411 TYR N N N N 412 TYR CA C N S 413 TYR C C N N 414 TYR O O N N 415 TYR CB C N N 416 TYR CG C Y N 417 TYR CD1 C Y N 418 TYR CD2 C Y N 419 TYR CE1 C Y N 420 TYR CE2 C Y N 421 TYR CZ C Y N 422 TYR OH O N N 423 TYR OXT O N N 424 TYR H H N N 425 TYR H2 H N N 426 TYR HA H N N 427 TYR HB2 H N N 428 TYR HB3 H N N 429 TYR HD1 H N N 430 TYR HD2 H N N 431 TYR HE1 H N N 432 TYR HE2 H N N 433 TYR HH H N N 434 TYR HXT H N N 435 VAL N N N N 436 VAL CA C N S 437 VAL C C N N 438 VAL O O N N 439 VAL CB C N N 440 VAL CG1 C N N 441 VAL CG2 C N N 442 VAL OXT O N N 443 VAL H H N N 444 VAL H2 H N N 445 VAL HA H N N 446 VAL HB H N N 447 VAL HG11 H N N 448 VAL HG12 H N N 449 VAL HG13 H N N 450 VAL HG21 H N N 451 VAL HG22 H N N 452 VAL HG23 H N N 453 VAL HXT H N N 454 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 B4P PA O1A doub N N 70 B4P PA O2A sing N N 71 B4P PA O3A sing N N 72 B4P PA O5E sing N N 73 B4P O2A HOA2 sing N N 74 B4P O3A PB sing N N 75 B4P PB O1B doub N N 76 B4P PB O2B sing N N 77 B4P PB O3B sing N N 78 B4P O2B HOB2 sing N N 79 B4P O3B PG sing N N 80 B4P PG O1G doub N N 81 B4P PG O2G sing N N 82 B4P PG O3G sing N N 83 B4P O2G HOG2 sing N N 84 B4P O3G PD sing N N 85 B4P PD O1D doub N N 86 B4P PD O2D sing N N 87 B4P PD O5F sing N N 88 B4P O2D HOD2 sing N N 89 B4P O5E C5E sing N N 90 B4P C5E C4E sing N N 91 B4P C5E H51A sing N N 92 B4P C5E H52A sing N N 93 B4P C4E O4E sing N N 94 B4P C4E C3E sing N N 95 B4P C4E H4E sing N N 96 B4P O4E C1E sing N N 97 B4P C3E O3E sing N N 98 B4P C3E C2E sing N N 99 B4P C3E H3E sing N N 100 B4P O3E HO3A sing N N 101 B4P C2E O2E sing N N 102 B4P C2E C1E sing N N 103 B4P C2E H2E sing N N 104 B4P O2E HO2A sing N N 105 B4P C1E N9A sing N N 106 B4P C1E H1E sing N N 107 B4P N9A C8A sing Y N 108 B4P N9A C4A sing Y N 109 B4P C8A N7A doub Y N 110 B4P C8A H8A sing N N 111 B4P N7A C5A sing Y N 112 B4P C5A C6A sing Y N 113 B4P C5A C4A doub Y N 114 B4P C6A N6A sing N N 115 B4P C6A N1A doub Y N 116 B4P N6A H61A sing N N 117 B4P N6A H62A sing N N 118 B4P N1A C2A sing Y N 119 B4P C2A N3A doub Y N 120 B4P C2A H2A sing N N 121 B4P N3A C4A sing Y N 122 B4P O5F C5F sing N N 123 B4P C5F C4F sing N N 124 B4P C5F H51B sing N N 125 B4P C5F H52B sing N N 126 B4P C4F O4F sing N N 127 B4P C4F C3F sing N N 128 B4P C4F H4F sing N N 129 B4P O4F C1F sing N N 130 B4P C3F O3F sing N N 131 B4P C3F C2F sing N N 132 B4P C3F H3F sing N N 133 B4P O3F HO3B sing N N 134 B4P C2F O2F sing N N 135 B4P C2F C1F sing N N 136 B4P C2F H2F sing N N 137 B4P O2F HO2B sing N N 138 B4P C1F N9B sing N N 139 B4P C1F H1F sing N N 140 B4P N9B C8B sing Y N 141 B4P N9B C4B sing Y N 142 B4P C8B N7B doub Y N 143 B4P C8B H8B sing N N 144 B4P N7B C5B sing Y N 145 B4P C5B C6B sing Y N 146 B4P C5B C4B doub Y N 147 B4P C6B N6B sing N N 148 B4P C6B N1B doub Y N 149 B4P N6B H61B sing N N 150 B4P N6B H62B sing N N 151 B4P N1B C2B sing Y N 152 B4P C2B N3B doub Y N 153 B4P C2B H2B sing N N 154 B4P N3B C4B sing Y N 155 CYS N CA sing N N 156 CYS N H sing N N 157 CYS N H2 sing N N 158 CYS CA C sing N N 159 CYS CA CB sing N N 160 CYS CA HA sing N N 161 CYS C O doub N N 162 CYS C OXT sing N N 163 CYS CB SG sing N N 164 CYS CB HB2 sing N N 165 CYS CB HB3 sing N N 166 CYS SG HG sing N N 167 CYS OXT HXT sing N N 168 EDO C1 O1 sing N N 169 EDO C1 C2 sing N N 170 EDO C1 H11 sing N N 171 EDO C1 H12 sing N N 172 EDO O1 HO1 sing N N 173 EDO C2 O2 sing N N 174 EDO C2 H21 sing N N 175 EDO C2 H22 sing N N 176 EDO O2 HO2 sing N N 177 GLN N CA sing N N 178 GLN N H sing N N 179 GLN N H2 sing N N 180 GLN CA C sing N N 181 GLN CA CB sing N N 182 GLN CA HA sing N N 183 GLN C O doub N N 184 GLN C OXT sing N N 185 GLN CB CG sing N N 186 GLN CB HB2 sing N N 187 GLN CB HB3 sing N N 188 GLN CG CD sing N N 189 GLN CG HG2 sing N N 190 GLN CG HG3 sing N N 191 GLN CD OE1 doub N N 192 GLN CD NE2 sing N N 193 GLN NE2 HE21 sing N N 194 GLN NE2 HE22 sing N N 195 GLN OXT HXT sing N N 196 GLU N CA sing N N 197 GLU N H sing N N 198 GLU N H2 sing N N 199 GLU CA C sing N N 200 GLU CA CB sing N N 201 GLU CA HA sing N N 202 GLU C O doub N N 203 GLU C OXT sing N N 204 GLU CB CG sing N N 205 GLU CB HB2 sing N N 206 GLU CB HB3 sing N N 207 GLU CG CD sing N N 208 GLU CG HG2 sing N N 209 GLU CG HG3 sing N N 210 GLU CD OE1 doub N N 211 GLU CD OE2 sing N N 212 GLU OE2 HE2 sing N N 213 GLU OXT HXT sing N N 214 GLY N CA sing N N 215 GLY N H sing N N 216 GLY N H2 sing N N 217 GLY CA C sing N N 218 GLY CA HA2 sing N N 219 GLY CA HA3 sing N N 220 GLY C O doub N N 221 GLY C OXT sing N N 222 GLY OXT HXT sing N N 223 HIS N CA sing N N 224 HIS N H sing N N 225 HIS N H2 sing N N 226 HIS CA C sing N N 227 HIS CA CB sing N N 228 HIS CA HA sing N N 229 HIS C O doub N N 230 HIS C OXT sing N N 231 HIS CB CG sing N N 232 HIS CB HB2 sing N N 233 HIS CB HB3 sing N N 234 HIS CG ND1 sing Y N 235 HIS CG CD2 doub Y N 236 HIS ND1 CE1 doub Y N 237 HIS ND1 HD1 sing N N 238 HIS CD2 NE2 sing Y N 239 HIS CD2 HD2 sing N N 240 HIS CE1 NE2 sing Y N 241 HIS CE1 HE1 sing N N 242 HIS NE2 HE2 sing N N 243 HIS OXT HXT sing N N 244 HOH O H1 sing N N 245 HOH O H2 sing N N 246 ILE N CA sing N N 247 ILE N H sing N N 248 ILE N H2 sing N N 249 ILE CA C sing N N 250 ILE CA CB sing N N 251 ILE CA HA sing N N 252 ILE C O doub N N 253 ILE C OXT sing N N 254 ILE CB CG1 sing N N 255 ILE CB CG2 sing N N 256 ILE CB HB sing N N 257 ILE CG1 CD1 sing N N 258 ILE CG1 HG12 sing N N 259 ILE CG1 HG13 sing N N 260 ILE CG2 HG21 sing N N 261 ILE CG2 HG22 sing N N 262 ILE CG2 HG23 sing N N 263 ILE CD1 HD11 sing N N 264 ILE CD1 HD12 sing N N 265 ILE CD1 HD13 sing N N 266 ILE OXT HXT sing N N 267 LEU N CA sing N N 268 LEU N H sing N N 269 LEU N H2 sing N N 270 LEU CA C sing N N 271 LEU CA CB sing N N 272 LEU CA HA sing N N 273 LEU C O doub N N 274 LEU C OXT sing N N 275 LEU CB CG sing N N 276 LEU CB HB2 sing N N 277 LEU CB HB3 sing N N 278 LEU CG CD1 sing N N 279 LEU CG CD2 sing N N 280 LEU CG HG sing N N 281 LEU CD1 HD11 sing N N 282 LEU CD1 HD12 sing N N 283 LEU CD1 HD13 sing N N 284 LEU CD2 HD21 sing N N 285 LEU CD2 HD22 sing N N 286 LEU CD2 HD23 sing N N 287 LEU OXT HXT sing N N 288 LYS N CA sing N N 289 LYS N H sing N N 290 LYS N H2 sing N N 291 LYS CA C sing N N 292 LYS CA CB sing N N 293 LYS CA HA sing N N 294 LYS C O doub N N 295 LYS C OXT sing N N 296 LYS CB CG sing N N 297 LYS CB HB2 sing N N 298 LYS CB HB3 sing N N 299 LYS CG CD sing N N 300 LYS CG HG2 sing N N 301 LYS CG HG3 sing N N 302 LYS CD CE sing N N 303 LYS CD HD2 sing N N 304 LYS CD HD3 sing N N 305 LYS CE NZ sing N N 306 LYS CE HE2 sing N N 307 LYS CE HE3 sing N N 308 LYS NZ HZ1 sing N N 309 LYS NZ HZ2 sing N N 310 LYS NZ HZ3 sing N N 311 LYS OXT HXT sing N N 312 MET N CA sing N N 313 MET N H sing N N 314 MET N H2 sing N N 315 MET CA C sing N N 316 MET CA CB sing N N 317 MET CA HA sing N N 318 MET C O doub N N 319 MET C OXT sing N N 320 MET CB CG sing N N 321 MET CB HB2 sing N N 322 MET CB HB3 sing N N 323 MET CG SD sing N N 324 MET CG HG2 sing N N 325 MET CG HG3 sing N N 326 MET SD CE sing N N 327 MET CE HE1 sing N N 328 MET CE HE2 sing N N 329 MET CE HE3 sing N N 330 MET OXT HXT sing N N 331 PHE N CA sing N N 332 PHE N H sing N N 333 PHE N H2 sing N N 334 PHE CA C sing N N 335 PHE CA CB sing N N 336 PHE CA HA sing N N 337 PHE C O doub N N 338 PHE C OXT sing N N 339 PHE CB CG sing N N 340 PHE CB HB2 sing N N 341 PHE CB HB3 sing N N 342 PHE CG CD1 doub Y N 343 PHE CG CD2 sing Y N 344 PHE CD1 CE1 sing Y N 345 PHE CD1 HD1 sing N N 346 PHE CD2 CE2 doub Y N 347 PHE CD2 HD2 sing N N 348 PHE CE1 CZ doub Y N 349 PHE CE1 HE1 sing N N 350 PHE CE2 CZ sing Y N 351 PHE CE2 HE2 sing N N 352 PHE CZ HZ sing N N 353 PHE OXT HXT sing N N 354 PRO N CA sing N N 355 PRO N CD sing N N 356 PRO N H sing N N 357 PRO CA C sing N N 358 PRO CA CB sing N N 359 PRO CA HA sing N N 360 PRO C O doub N N 361 PRO C OXT sing N N 362 PRO CB CG sing N N 363 PRO CB HB2 sing N N 364 PRO CB HB3 sing N N 365 PRO CG CD sing N N 366 PRO CG HG2 sing N N 367 PRO CG HG3 sing N N 368 PRO CD HD2 sing N N 369 PRO CD HD3 sing N N 370 PRO OXT HXT sing N N 371 SER N CA sing N N 372 SER N H sing N N 373 SER N H2 sing N N 374 SER CA C sing N N 375 SER CA CB sing N N 376 SER CA HA sing N N 377 SER C O doub N N 378 SER C OXT sing N N 379 SER CB OG sing N N 380 SER CB HB2 sing N N 381 SER CB HB3 sing N N 382 SER OG HG sing N N 383 SER OXT HXT sing N N 384 THR N CA sing N N 385 THR N H sing N N 386 THR N H2 sing N N 387 THR CA C sing N N 388 THR CA CB sing N N 389 THR CA HA sing N N 390 THR C O doub N N 391 THR C OXT sing N N 392 THR CB OG1 sing N N 393 THR CB CG2 sing N N 394 THR CB HB sing N N 395 THR OG1 HG1 sing N N 396 THR CG2 HG21 sing N N 397 THR CG2 HG22 sing N N 398 THR CG2 HG23 sing N N 399 THR OXT HXT sing N N 400 TYR N CA sing N N 401 TYR N H sing N N 402 TYR N H2 sing N N 403 TYR CA C sing N N 404 TYR CA CB sing N N 405 TYR CA HA sing N N 406 TYR C O doub N N 407 TYR C OXT sing N N 408 TYR CB CG sing N N 409 TYR CB HB2 sing N N 410 TYR CB HB3 sing N N 411 TYR CG CD1 doub Y N 412 TYR CG CD2 sing Y N 413 TYR CD1 CE1 sing Y N 414 TYR CD1 HD1 sing N N 415 TYR CD2 CE2 doub Y N 416 TYR CD2 HD2 sing N N 417 TYR CE1 CZ doub Y N 418 TYR CE1 HE1 sing N N 419 TYR CE2 CZ sing Y N 420 TYR CE2 HE2 sing N N 421 TYR CZ OH sing N N 422 TYR OH HH sing N N 423 TYR OXT HXT sing N N 424 VAL N CA sing N N 425 VAL N H sing N N 426 VAL N H2 sing N N 427 VAL CA C sing N N 428 VAL CA CB sing N N 429 VAL CA HA sing N N 430 VAL C O doub N N 431 VAL C OXT sing N N 432 VAL CB CG1 sing N N 433 VAL CB CG2 sing N N 434 VAL CB HB sing N N 435 VAL CG1 HG11 sing N N 436 VAL CG1 HG12 sing N N 437 VAL CG1 HG13 sing N N 438 VAL CG2 HG21 sing N N 439 VAL CG2 HG22 sing N N 440 VAL CG2 HG23 sing N N 441 VAL OXT HXT sing N N 442 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AK2 _pdbx_initial_refinement_model.details 'PDB ENTRY 1AK2' # _atom_sites.entry_id 2C9Y _atom_sites.fract_transf_matrix[1][1] 0.022202 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020300 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007874 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_