data_2CAJ # _entry.id 2CAJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CAJ pdb_00002caj 10.2210/pdb2caj/pdb PDBE EBI-26895 ? ? WWPDB D_1290026895 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-07-17 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-05-01 5 'Structure model' 1 4 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 14 4 'Structure model' '_struct_conn.pdbx_dist_value' 15 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 16 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_symmetry' 23 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CAJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-12-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CA9 unspecified 'APO-HPNIKR IN CLOSED TRANS-CONFORMATION' PDB 2CAD unspecified 'NIKR FROM HELICOBACTER PYLORI IN CLOSED TRANS-CONFORMATION AND NICKEL BOUND TO 2F, 2X AND 2I SITES' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dian, C.' 1 'Schauer, K.' 2 'Kapp, U.' 3 'McSweeney, S.M.' 4 'Labigne, A.' 5 'Terradot, L.' 6 # _citation.id primary _citation.title 'Structural Basis of the Nickel Response in Helicobacter Pylori: Crystal Structures of Hpnikr in Apo and Nickel-Bound States.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 361 _citation.page_first 715 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16872629 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2006.06.058 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dian, C.' 1 ? primary 'Schauer, K.' 2 ? primary 'Kapp, U.' 3 ? primary 'Mcsweeney, S.M.' 4 ? primary 'Labigne, A.' 5 ? primary 'Terradot, L.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PUTATIVE NICKEL-RESPONSIVE REGULATOR' 17170.271 2 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 6 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 5 water nat water 18.015 64 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELN QRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSFEYNE ; _entity_poly.pdbx_seq_one_letter_code_can ;MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELN QRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSFEYNE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'CHLORIDE ION' CL 4 'NICKEL (II) ION' NI 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 THR n 1 4 PRO n 1 5 ASN n 1 6 LYS n 1 7 ASP n 1 8 ASP n 1 9 SER n 1 10 ILE n 1 11 ILE n 1 12 ARG n 1 13 PHE n 1 14 SER n 1 15 VAL n 1 16 SER n 1 17 LEU n 1 18 GLN n 1 19 GLN n 1 20 ASN n 1 21 LEU n 1 22 LEU n 1 23 ASP n 1 24 GLU n 1 25 LEU n 1 26 ASP n 1 27 ASN n 1 28 ARG n 1 29 ILE n 1 30 ILE n 1 31 LYS n 1 32 ASN n 1 33 GLY n 1 34 TYR n 1 35 SER n 1 36 SER n 1 37 ARG n 1 38 SER n 1 39 GLU n 1 40 LEU n 1 41 VAL n 1 42 ARG n 1 43 ASP n 1 44 MET n 1 45 ILE n 1 46 ARG n 1 47 GLU n 1 48 LYS n 1 49 LEU n 1 50 VAL n 1 51 GLU n 1 52 ASP n 1 53 ASN n 1 54 TRP n 1 55 ALA n 1 56 GLU n 1 57 ASP n 1 58 ASN n 1 59 PRO n 1 60 ASN n 1 61 ASP n 1 62 GLU n 1 63 SER n 1 64 LYS n 1 65 ILE n 1 66 ALA n 1 67 VAL n 1 68 LEU n 1 69 VAL n 1 70 VAL n 1 71 ILE n 1 72 TYR n 1 73 ASP n 1 74 HIS n 1 75 HIS n 1 76 GLN n 1 77 ARG n 1 78 GLU n 1 79 LEU n 1 80 ASN n 1 81 GLN n 1 82 ARG n 1 83 MET n 1 84 ILE n 1 85 ASP n 1 86 ILE n 1 87 GLN n 1 88 HIS n 1 89 ALA n 1 90 SER n 1 91 GLY n 1 92 THR n 1 93 HIS n 1 94 VAL n 1 95 LEU n 1 96 CYS n 1 97 THR n 1 98 THR n 1 99 HIS n 1 100 ILE n 1 101 HIS n 1 102 MET n 1 103 ASP n 1 104 GLU n 1 105 HIS n 1 106 ASN n 1 107 CYS n 1 108 LEU n 1 109 GLU n 1 110 THR n 1 111 ILE n 1 112 ILE n 1 113 LEU n 1 114 GLN n 1 115 GLY n 1 116 ASN n 1 117 SER n 1 118 PHE n 1 119 GLU n 1 120 ILE n 1 121 GLN n 1 122 ARG n 1 123 LEU n 1 124 GLN n 1 125 LEU n 1 126 GLU n 1 127 ILE n 1 128 GLY n 1 129 GLY n 1 130 LEU n 1 131 ARG n 1 132 GLY n 1 133 VAL n 1 134 LYS n 1 135 PHE n 1 136 ALA n 1 137 LYS n 1 138 LEU n 1 139 THR n 1 140 LYS n 1 141 ALA n 1 142 SER n 1 143 SER n 1 144 PHE n 1 145 GLU n 1 146 TYR n 1 147 ASN n 1 148 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 26695 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HELICOBACTER PYLORI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85962 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET11A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 THR 3 3 ? ? ? A . n A 1 4 PRO 4 4 ? ? ? A . n A 1 5 ASN 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 ASP 7 7 ? ? ? A . n A 1 8 ASP 8 8 ? ? ? A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ASN 53 53 ? ? ? A . n A 1 54 TRP 54 54 ? ? ? A . n A 1 55 ALA 55 55 ? ? ? A . n A 1 56 GLU 56 56 ? ? ? A . n A 1 57 ASP 57 57 ? ? ? A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 HIS 74 74 74 HIS HIS A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 CYS 107 107 107 CYS CYS A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 SER 142 142 ? ? ? A . n A 1 143 SER 143 143 ? ? ? A . n A 1 144 PHE 144 144 ? ? ? A . n A 1 145 GLU 145 145 ? ? ? A . n A 1 146 TYR 146 146 ? ? ? A . n A 1 147 ASN 147 147 ? ? ? A . n A 1 148 GLU 148 148 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ASP 2 2 ? ? ? B . n B 1 3 THR 3 3 ? ? ? B . n B 1 4 PRO 4 4 ? ? ? B . n B 1 5 ASN 5 5 ? ? ? B . n B 1 6 LYS 6 6 ? ? ? B . n B 1 7 ASP 7 7 ? ? ? B . n B 1 8 ASP 8 8 ? ? ? B . n B 1 9 SER 9 9 9 SER SER B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 ARG 12 12 12 ARG ARG B . n B 1 13 PHE 13 13 13 PHE PHE B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 ASN 20 20 20 ASN ASN B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 ASP 23 23 23 ASP ASP B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 ARG 28 28 28 ARG ARG B . n B 1 29 ILE 29 29 29 ILE ILE B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 ASN 32 32 32 ASN ASN B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 TYR 34 34 34 TYR TYR B . n B 1 35 SER 35 35 35 SER SER B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ARG 37 37 37 ARG ARG B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 MET 44 44 44 MET MET B . n B 1 45 ILE 45 45 45 ILE ILE B . n B 1 46 ARG 46 46 46 ARG ARG B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 LEU 49 49 49 LEU LEU B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 ASN 53 53 53 ASN ASN B . n B 1 54 TRP 54 54 54 TRP TRP B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 ASP 57 57 57 ASP ASP B . n B 1 58 ASN 58 58 58 ASN ASN B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 ASN 60 60 60 ASN ASN B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 GLU 62 62 62 GLU GLU B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 LYS 64 64 64 LYS LYS B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 ALA 66 66 66 ALA ALA B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 VAL 69 69 69 VAL VAL B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 TYR 72 72 72 TYR TYR B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 HIS 74 74 74 HIS HIS B . n B 1 75 HIS 75 75 75 HIS HIS B . n B 1 76 GLN 76 76 76 GLN GLN B . n B 1 77 ARG 77 77 77 ARG ARG B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 LEU 79 79 79 LEU LEU B . n B 1 80 ASN 80 80 80 ASN ASN B . n B 1 81 GLN 81 81 81 GLN GLN B . n B 1 82 ARG 82 82 82 ARG ARG B . n B 1 83 MET 83 83 83 MET MET B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 ILE 86 86 86 ILE ILE B . n B 1 87 GLN 87 87 87 GLN GLN B . n B 1 88 HIS 88 88 88 HIS HIS B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 HIS 93 93 93 HIS HIS B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 CYS 96 96 96 CYS CYS B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 THR 98 98 98 THR THR B . n B 1 99 HIS 99 99 99 HIS HIS B . n B 1 100 ILE 100 100 100 ILE ILE B . n B 1 101 HIS 101 101 101 HIS HIS B . n B 1 102 MET 102 102 102 MET MET B . n B 1 103 ASP 103 103 103 ASP ASP B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 HIS 105 105 105 HIS HIS B . n B 1 106 ASN 106 106 106 ASN ASN B . n B 1 107 CYS 107 107 107 CYS CYS B . n B 1 108 LEU 108 108 108 LEU LEU B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 THR 110 110 110 THR THR B . n B 1 111 ILE 111 111 111 ILE ILE B . n B 1 112 ILE 112 112 112 ILE ILE B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 GLN 114 114 114 GLN GLN B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 SER 117 117 117 SER SER B . n B 1 118 PHE 118 118 118 PHE PHE B . n B 1 119 GLU 119 119 119 GLU GLU B . n B 1 120 ILE 120 120 120 ILE ILE B . n B 1 121 GLN 121 121 121 GLN GLN B . n B 1 122 ARG 122 122 122 ARG ARG B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 GLN 124 124 124 GLN GLN B . n B 1 125 LEU 125 125 125 LEU LEU B . n B 1 126 GLU 126 126 126 GLU GLU B . n B 1 127 ILE 127 127 127 ILE ILE B . n B 1 128 GLY 128 128 128 GLY GLY B . n B 1 129 GLY 129 129 129 GLY GLY B . n B 1 130 LEU 130 130 130 LEU LEU B . n B 1 131 ARG 131 131 131 ARG ARG B . n B 1 132 GLY 132 132 132 GLY GLY B . n B 1 133 VAL 133 133 133 VAL VAL B . n B 1 134 LYS 134 134 134 LYS LYS B . n B 1 135 PHE 135 135 135 PHE PHE B . n B 1 136 ALA 136 136 136 ALA ALA B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 LEU 138 138 138 LEU LEU B . n B 1 139 THR 139 139 139 THR THR B . n B 1 140 LYS 140 140 140 LYS LYS B . n B 1 141 ALA 141 141 141 ALA ALA B . n B 1 142 SER 142 142 142 SER SER B . n B 1 143 SER 143 143 143 SER SER B . n B 1 144 PHE 144 144 144 PHE PHE B . n B 1 145 GLU 145 145 145 GLU GLU B . n B 1 146 TYR 146 146 146 TYR TYR B . n B 1 147 ASN 147 147 147 ASN ASN B . n B 1 148 GLU 148 148 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 1142 1142 GOL GOL A . D 2 GOL 1 1143 1143 GOL GOL A . E 2 GOL 1 1144 1144 GOL GOL A . F 2 GOL 1 1145 1145 GOL GOL A . G 2 GOL 1 1148 1148 GOL GOL B . H 2 GOL 1 1149 1149 GOL GOL B . I 3 CL 1 1150 1150 CL CL B . J 4 NI 1 1151 1151 NI NI B . K 4 NI 1 1152 1152 NI NI B . L 5 HOH 1 2001 2001 HOH HOH A . L 5 HOH 2 2002 2002 HOH HOH A . L 5 HOH 3 2003 2003 HOH HOH A . L 5 HOH 4 2004 2004 HOH HOH A . L 5 HOH 5 2005 2005 HOH HOH A . L 5 HOH 6 2006 2006 HOH HOH A . L 5 HOH 7 2007 2007 HOH HOH A . L 5 HOH 8 2008 2008 HOH HOH A . L 5 HOH 9 2009 2009 HOH HOH A . L 5 HOH 10 2010 2010 HOH HOH A . L 5 HOH 11 2011 2011 HOH HOH A . L 5 HOH 12 2012 2012 HOH HOH A . L 5 HOH 13 2013 2013 HOH HOH A . L 5 HOH 14 2014 2014 HOH HOH A . L 5 HOH 15 2015 2015 HOH HOH A . L 5 HOH 16 2016 2016 HOH HOH A . L 5 HOH 17 2017 2017 HOH HOH A . L 5 HOH 18 2018 2018 HOH HOH A . L 5 HOH 19 2019 2019 HOH HOH A . L 5 HOH 20 2020 2020 HOH HOH A . L 5 HOH 21 2021 2021 HOH HOH A . L 5 HOH 22 2022 2022 HOH HOH A . L 5 HOH 23 2023 2023 HOH HOH A . L 5 HOH 24 2024 2024 HOH HOH A . L 5 HOH 25 2025 2025 HOH HOH A . L 5 HOH 26 2026 2026 HOH HOH A . L 5 HOH 27 2027 2027 HOH HOH A . L 5 HOH 28 2028 2028 HOH HOH A . L 5 HOH 29 2029 2029 HOH HOH A . L 5 HOH 30 2030 2030 HOH HOH A . L 5 HOH 31 2031 2031 HOH HOH A . M 5 HOH 1 2001 2001 HOH HOH B . M 5 HOH 2 2002 2002 HOH HOH B . M 5 HOH 3 2003 2003 HOH HOH B . M 5 HOH 4 2004 2004 HOH HOH B . M 5 HOH 5 2005 2005 HOH HOH B . M 5 HOH 6 2006 2006 HOH HOH B . M 5 HOH 7 2007 2007 HOH HOH B . M 5 HOH 8 2008 2008 HOH HOH B . M 5 HOH 9 2009 2009 HOH HOH B . M 5 HOH 10 2010 2010 HOH HOH B . M 5 HOH 11 2011 2011 HOH HOH B . M 5 HOH 12 2012 2012 HOH HOH B . M 5 HOH 13 2013 2013 HOH HOH B . M 5 HOH 14 2014 2014 HOH HOH B . M 5 HOH 15 2015 2015 HOH HOH B . M 5 HOH 16 2016 2016 HOH HOH B . M 5 HOH 17 2017 2017 HOH HOH B . M 5 HOH 18 2018 2018 HOH HOH B . M 5 HOH 19 2019 2019 HOH HOH B . M 5 HOH 20 2020 2020 HOH HOH B . M 5 HOH 21 2021 2021 HOH HOH B . M 5 HOH 22 2022 2022 HOH HOH B . M 5 HOH 23 2023 2023 HOH HOH B . M 5 HOH 24 2024 2024 HOH HOH B . M 5 HOH 25 2025 2025 HOH HOH B . M 5 HOH 26 2026 2026 HOH HOH B . M 5 HOH 27 2027 2027 HOH HOH B . M 5 HOH 28 2028 2028 HOH HOH B . M 5 HOH 29 2029 2029 HOH HOH B . M 5 HOH 30 2030 2030 HOH HOH B . M 5 HOH 31 2031 2031 HOH HOH B . M 5 HOH 32 2032 2032 HOH HOH B . M 5 HOH 33 2033 2033 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 9 ? OG ? A SER 9 OG 2 1 Y 1 A ILE 10 ? CG1 ? A ILE 10 CG1 3 1 Y 1 A ILE 10 ? CG2 ? A ILE 10 CG2 4 1 Y 1 A ILE 10 ? CD1 ? A ILE 10 CD1 5 1 Y 1 A ILE 11 ? CG1 ? A ILE 11 CG1 6 1 Y 1 A ILE 11 ? CG2 ? A ILE 11 CG2 7 1 Y 1 A ILE 11 ? CD1 ? A ILE 11 CD1 8 1 Y 1 A ARG 12 ? CG ? A ARG 12 CG 9 1 Y 1 A ARG 12 ? CD ? A ARG 12 CD 10 1 Y 1 A ARG 12 ? NE ? A ARG 12 NE 11 1 Y 1 A ARG 12 ? CZ ? A ARG 12 CZ 12 1 Y 1 A ARG 12 ? NH1 ? A ARG 12 NH1 13 1 Y 1 A ARG 12 ? NH2 ? A ARG 12 NH2 14 1 Y 1 A SER 16 ? OG ? A SER 16 OG 15 1 Y 1 A GLN 18 ? CG ? A GLN 18 CG 16 1 Y 1 A GLN 18 ? CD ? A GLN 18 CD 17 1 Y 1 A GLN 18 ? OE1 ? A GLN 18 OE1 18 1 Y 1 A GLN 18 ? NE2 ? A GLN 18 NE2 19 1 Y 1 A ARG 46 ? CG ? A ARG 46 CG 20 1 Y 1 A ARG 46 ? CD ? A ARG 46 CD 21 1 Y 1 A ARG 46 ? NE ? A ARG 46 NE 22 1 Y 1 A ARG 46 ? CZ ? A ARG 46 CZ 23 1 Y 1 A ARG 46 ? NH1 ? A ARG 46 NH1 24 1 Y 1 A ARG 46 ? NH2 ? A ARG 46 NH2 25 1 Y 1 A ASN 58 ? CG ? A ASN 58 CG 26 1 Y 1 A ASN 58 ? OD1 ? A ASN 58 OD1 27 1 Y 1 A ASN 58 ? ND2 ? A ASN 58 ND2 28 1 Y 1 A GLU 62 ? CG ? A GLU 62 CG 29 1 Y 1 A GLU 62 ? CD ? A GLU 62 CD 30 1 Y 1 A GLU 62 ? OE1 ? A GLU 62 OE1 31 1 Y 1 A GLU 62 ? OE2 ? A GLU 62 OE2 32 1 Y 1 A GLU 104 ? CG ? A GLU 104 CG 33 1 Y 1 A GLU 104 ? CD ? A GLU 104 CD 34 1 Y 1 A GLU 104 ? OE1 ? A GLU 104 OE1 35 1 Y 1 A GLU 104 ? OE2 ? A GLU 104 OE2 36 1 Y 1 A LYS 140 ? CG ? A LYS 140 CG 37 1 Y 1 A LYS 140 ? CD ? A LYS 140 CD 38 1 Y 1 A LYS 140 ? CE ? A LYS 140 CE 39 1 Y 1 A LYS 140 ? NZ ? A LYS 140 NZ 40 1 Y 1 B ILE 10 ? CG1 ? B ILE 10 CG1 41 1 Y 1 B ILE 10 ? CG2 ? B ILE 10 CG2 42 1 Y 1 B ILE 10 ? CD1 ? B ILE 10 CD1 43 1 Y 1 B ARG 12 ? CG ? B ARG 12 CG 44 1 Y 1 B ARG 12 ? CD ? B ARG 12 CD 45 1 Y 1 B ARG 12 ? NE ? B ARG 12 NE 46 1 Y 1 B ARG 12 ? CZ ? B ARG 12 CZ 47 1 Y 1 B ARG 12 ? NH1 ? B ARG 12 NH1 48 1 Y 1 B ARG 12 ? NH2 ? B ARG 12 NH2 49 1 Y 1 B LEU 17 ? CG ? B LEU 17 CG 50 1 Y 1 B LEU 17 ? CD1 ? B LEU 17 CD1 51 1 Y 1 B LEU 17 ? CD2 ? B LEU 17 CD2 52 1 Y 1 B GLN 19 ? CG ? B GLN 19 CG 53 1 Y 1 B GLN 19 ? CD ? B GLN 19 CD 54 1 Y 1 B GLN 19 ? OE1 ? B GLN 19 OE1 55 1 Y 1 B GLN 19 ? NE2 ? B GLN 19 NE2 56 1 Y 1 B ASN 20 ? CG ? B ASN 20 CG 57 1 Y 1 B ASN 20 ? OD1 ? B ASN 20 OD1 58 1 Y 1 B ASN 20 ? ND2 ? B ASN 20 ND2 59 1 Y 1 B GLU 24 ? CG ? B GLU 24 CG 60 1 Y 1 B GLU 24 ? CD ? B GLU 24 CD 61 1 Y 1 B GLU 24 ? OE1 ? B GLU 24 OE1 62 1 Y 1 B GLU 24 ? OE2 ? B GLU 24 OE2 63 1 Y 1 B ILE 30 ? CG1 ? B ILE 30 CG1 64 1 Y 1 B ILE 30 ? CG2 ? B ILE 30 CG2 65 1 Y 1 B ILE 30 ? CD1 ? B ILE 30 CD1 66 1 Y 1 B LYS 31 ? CG ? B LYS 31 CG 67 1 Y 1 B LYS 31 ? CD ? B LYS 31 CD 68 1 Y 1 B LYS 31 ? CE ? B LYS 31 CE 69 1 Y 1 B LYS 31 ? NZ ? B LYS 31 NZ 70 1 Y 1 B ASN 60 ? CG ? B ASN 60 CG 71 1 Y 1 B ASN 60 ? OD1 ? B ASN 60 OD1 72 1 Y 1 B ASN 60 ? ND2 ? B ASN 60 ND2 73 1 Y 1 B GLU 104 ? CG ? B GLU 104 CG 74 1 Y 1 B GLU 104 ? CD ? B GLU 104 CD 75 1 Y 1 B GLU 104 ? OE1 ? B GLU 104 OE1 76 1 Y 1 B GLU 104 ? OE2 ? B GLU 104 OE2 77 1 Y 1 B ASN 147 ? CG ? B ASN 147 CG 78 1 Y 1 B ASN 147 ? OD1 ? B ASN 147 OD1 79 1 Y 1 B ASN 147 ? ND2 ? B ASN 147 ND2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MOSFLM 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # _cell.entry_id 2CAJ _cell.length_a 71.598 _cell.length_b 71.598 _cell.length_c 228.834 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CAJ _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 2CAJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 49.8 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.9-1.0 M NA-FORMATE, 0.1M NA-CITRATE PH 4.0. CRYSTAL WAS SOAKED IN MOTHER LIQUOR WITH 30% GLYCEROL AND 0.02 M NICKEL CHLORIDE DURING ONE HOUR. ; # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9756 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.9756 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2CAJ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 62.020 _reflns.d_resolution_high 2.350 _reflns.number_obs 15378 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.07000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.4000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.400 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.48 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.49000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.600 _reflns_shell.pdbx_redundancy 6.70 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2CAJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14496 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 62.02 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.232 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.230 _refine.ls_R_factor_R_free 0.282 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 788 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.928 _refine.correlation_coeff_Fo_to_Fc_free 0.901 _refine.B_iso_mean 41.68 _refine.aniso_B[1][1] -0.23000 _refine.aniso_B[2][2] -0.23000 _refine.aniso_B[3][3] 0.35000 _refine.aniso_B[1][2] -0.12000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'NIKR FROM HELICOBACTER PYLORI SOLVED BY SAD METHOD USING MERCURY DERIVATIVE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.342 _refine.pdbx_overall_ESU_R_Free 0.263 _refine.overall_SU_ML 0.187 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.558 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2085 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 64 _refine_hist.number_atoms_total 2188 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 62.02 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.021 ? 2160 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1968 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.643 1.954 ? 2910 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.866 3.000 ? 4551 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.334 5.000 ? 270 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.570 24.623 ? 106 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.228 15.000 ? 383 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.427 15.000 ? 15 'X-RAY DIFFRACTION' ? r_chiral_restr 0.087 0.200 ? 337 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 2392 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 414 'X-RAY DIFFRACTION' ? r_nbd_refined 0.214 0.200 ? 448 'X-RAY DIFFRACTION' ? r_nbd_other 0.195 0.200 ? 2099 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.173 0.200 ? 1027 'X-RAY DIFFRACTION' ? r_nbtor_other 0.092 0.200 ? 1403 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.186 0.200 ? 86 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.323 0.200 ? 28 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.322 0.200 ? 91 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.187 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.190 1.500 ? 1366 'X-RAY DIFFRACTION' ? r_mcbond_other 0.185 1.500 ? 552 'X-RAY DIFFRACTION' ? r_mcangle_it 1.996 2.000 ? 2139 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.477 3.000 ? 859 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.135 4.500 ? 769 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.35 _refine_ls_shell.d_res_low 2.41 _refine_ls_shell.number_reflns_R_work 995 _refine_ls_shell.R_factor_R_work 0.2370 _refine_ls_shell.percent_reflns_obs 95.56 _refine_ls_shell.R_factor_R_free 0.2770 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2CAJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2CAJ _struct.title 'NikR from Helicobacter pylori in closed trans-conformation and nickel bound to 4 intermediary sites' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CAJ _struct_keywords.pdbx_keywords 'TRANSCRIPTIONAL REGULATION' _struct_keywords.text ;NICKEL UPTAKE, TRANSCRIPTION REGULATOR, RIBBON-HELIX-HELIX, ACIDIC-ADAPTIVE RESPONSE, TRANSCRIPTIONAL REGULATION, DNA-BINDING, HYPOTHETICAL PROTEIN, METAL-BINDING, NICKEL ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 5 ? M N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NIKR_HELPY _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O25896 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2CAJ A 1 ? 148 ? O25896 1 ? 148 ? 1 148 2 1 2CAJ B 1 ? 148 ? O25896 1 ? 148 ? 1 148 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 19 ? LYS A 31 ? GLN A 19 LYS A 31 1 ? 13 HELX_P HELX_P2 2 ARG A 37 ? LYS A 48 ? ARG A 37 LYS A 48 1 ? 12 HELX_P HELX_P3 3 LEU A 79 ? GLY A 91 ? LEU A 79 GLY A 91 1 ? 13 HELX_P HELX_P4 4 SER A 117 ? GLY A 128 ? SER A 117 GLY A 128 1 ? 12 HELX_P HELX_P5 5 LEU B 21 ? ILE B 30 ? LEU B 21 ILE B 30 1 ? 10 HELX_P HELX_P6 6 ARG B 37 ? ALA B 55 ? ARG B 37 ALA B 55 1 ? 19 HELX_P HELX_P7 7 GLU B 78 ? SER B 90 ? GLU B 78 SER B 90 1 ? 13 HELX_P HELX_P8 8 SER B 117 ? GLY B 128 ? SER B 117 GLY B 128 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 96 SG B ? ? 1_555 A CYS 96 SG B ? A CYS 96 A CYS 96 8_555 ? ? ? ? ? ? ? 2.533 ? ? disulf2 disulf ? ? A CYS 96 SG A ? ? 1_555 A CYS 96 SG A ? A CYS 96 A CYS 96 8_555 ? ? ? ? ? ? ? 2.797 ? ? metalc1 metalc ? ? A HIS 74 NE2 ? ? ? 8_555 J NI . NI ? ? A HIS 74 B NI 1151 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc2 metalc ? ? A HIS 88 NE2 ? ? ? 8_555 K NI . NI ? ? A HIS 88 B NI 1152 1_555 ? ? ? ? ? ? ? 2.484 ? ? metalc3 metalc ? ? B HIS 74 NE2 ? ? ? 1_555 K NI . NI ? ? B HIS 74 B NI 1152 1_555 ? ? ? ? ? ? ? 2.577 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 88 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 88 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 8_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NI _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id K _pdbx_struct_conn_angle.ptnr2_label_comp_id NI _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id NI _pdbx_struct_conn_angle.ptnr2_auth_seq_id 1152 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id HIS _pdbx_struct_conn_angle.ptnr3_label_seq_id 74 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id B _pdbx_struct_conn_angle.ptnr3_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr3_auth_seq_id 74 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 82.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 96 A CYS A 96 A CYS A 96 ? 1_555 CYS A 96 ? 8_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 96 B CYS A 96 B CYS A 96 ? 1_555 CYS A 96 ? 8_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 4 ? BA ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PHE A 13 ? LEU A 17 ? PHE A 13 LEU A 17 AA 2 ILE B 11 ? VAL B 15 ? ILE B 11 VAL B 15 AB 1 HIS A 93 ? HIS A 101 ? HIS A 93 HIS A 101 AB 2 ASN A 106 ? GLY A 115 ? ASN A 106 GLY A 115 AB 3 LYS A 64 ? ASP A 73 ? LYS A 64 ASP A 73 AB 4 VAL A 133 ? LYS A 140 ? VAL A 133 LYS A 140 BA 1 HIS B 93 ? HIS B 101 ? HIS B 93 HIS B 101 BA 2 ASN B 106 ? GLY B 115 ? ASN B 106 GLY B 115 BA 3 LYS B 64 ? ASP B 73 ? LYS B 64 ASP B 73 BA 4 VAL B 133 ? ALA B 141 ? VAL B 133 ALA B 141 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 17 ? N LEU A 17 O ILE B 11 ? O ILE B 11 AB 1 2 N ILE A 100 ? N ILE A 100 O LEU A 108 ? O LEU A 108 AB 2 3 N GLY A 115 ? N GLY A 115 O LYS A 64 ? O LYS A 64 AB 3 4 O ILE A 71 ? O ILE A 71 N LYS A 134 ? N LYS A 134 BA 1 2 N ILE B 100 ? N ILE B 100 O LEU B 108 ? O LEU B 108 BA 2 3 N GLY B 115 ? N GLY B 115 O LYS B 64 ? O LYS B 64 BA 3 4 O ILE B 71 ? O ILE B 71 N LYS B 134 ? N LYS B 134 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL B1150' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE NI B1151' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NI B1152' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A1142' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A1143' AC6 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A1144' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A1145' AC8 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL B1148' AC9 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B1149' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 101 ? HIS A 101 . ? 1_555 ? 2 AC1 4 GLN B 87 ? GLN B 87 . ? 1_555 ? 3 AC1 4 HIS B 93 ? HIS B 93 . ? 1_555 ? 4 AC1 4 NI J . ? NI B 1151 . ? 1_555 ? 5 AC2 3 HIS A 74 ? HIS A 74 . ? 1_555 ? 6 AC2 3 HIS B 88 ? HIS B 88 . ? 1_555 ? 7 AC2 3 CL I . ? CL B 1150 . ? 1_555 ? 8 AC3 4 HIS A 88 ? HIS A 88 . ? 1_555 ? 9 AC3 4 HIS B 74 ? HIS B 74 . ? 1_555 ? 10 AC3 4 HIS B 75 ? HIS B 75 . ? 1_555 ? 11 AC3 4 HIS B 101 ? HIS B 101 . ? 1_555 ? 12 AC4 7 GLU A 78 ? GLU A 78 . ? 1_555 ? 13 AC4 7 GLN A 81 ? GLN A 81 . ? 1_555 ? 14 AC4 7 ARG A 82 ? ARG A 82 . ? 1_555 ? 15 AC4 7 HOH L . ? HOH A 2016 . ? 1_555 ? 16 AC4 7 HOH L . ? HOH A 2028 . ? 1_555 ? 17 AC4 7 ARG B 77 ? ARG B 77 . ? 1_555 ? 18 AC4 7 GLU B 78 ? GLU B 78 . ? 1_555 ? 19 AC5 6 LEU A 130 ? LEU A 130 . ? 1_555 ? 20 AC5 6 ARG A 131 ? ARG A 131 . ? 1_555 ? 21 AC5 6 GLY A 132 ? GLY A 132 . ? 1_555 ? 22 AC5 6 VAL A 133 ? VAL A 133 . ? 1_555 ? 23 AC5 6 HOH L . ? HOH A 2029 . ? 1_555 ? 24 AC5 6 HOH L . ? HOH A 2030 . ? 1_555 ? 25 AC6 7 ASN A 80 ? ASN A 80 . ? 1_555 ? 26 AC6 7 MET A 83 ? MET A 83 . ? 1_555 ? 27 AC6 7 GLN A 87 ? GLN A 87 . ? 1_555 ? 28 AC6 7 THR A 97 ? THR A 97 . ? 1_555 ? 29 AC6 7 GLU A 109 ? GLU A 109 . ? 1_555 ? 30 AC6 7 ILE A 111 ? ILE A 111 . ? 1_555 ? 31 AC6 7 HOH L . ? HOH A 2031 . ? 1_555 ? 32 AC7 4 VAL A 94 ? VAL A 94 . ? 1_555 ? 33 AC7 4 LEU A 95 ? LEU A 95 . ? 1_555 ? 34 AC7 4 ILE B 100 ? ILE B 100 . ? 1_555 ? 35 AC7 4 HIS B 101 ? HIS B 101 . ? 1_555 ? 36 AC8 4 ASN B 80 ? ASN B 80 . ? 1_555 ? 37 AC8 4 MET B 83 ? MET B 83 . ? 1_555 ? 38 AC8 4 GLU B 109 ? GLU B 109 . ? 1_555 ? 39 AC8 4 HOH M . ? HOH B 2033 . ? 1_555 ? 40 AC9 6 GLN A 81 ? GLN A 81 . ? 1_555 ? 41 AC9 6 ASP A 85 ? ASP A 85 . ? 1_555 ? 42 AC9 6 HIS A 88 ? HIS A 88 . ? 1_555 ? 43 AC9 6 HIS B 74 ? HIS B 74 . ? 1_555 ? 44 AC9 6 HIS B 75 ? HIS B 75 . ? 1_555 ? 45 AC9 6 ARG B 77 ? ARG B 77 . ? 1_555 ? # _pdbx_entry_details.entry_id 2CAJ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 64 ? ? OG A SER 117 ? ? 2.07 2 1 O3 A GOL 1143 ? ? O A HOH 2030 ? ? 2.10 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 C3 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GOL _pdbx_validate_symm_contact.auth_seq_id_1 1145 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O3 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GOL _pdbx_validate_symm_contact.auth_seq_id_2 1145 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_555 _pdbx_validate_symm_contact.dist 1.57 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 77 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 77 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 77 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.53 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.77 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 10 ? ? 69.07 -7.53 2 1 LYS A 31 ? ? -42.92 -84.34 3 1 ASN A 32 ? ? -53.61 -6.20 4 1 GLU A 51 ? ? -138.62 -61.67 5 1 ASP A 103 ? ? -172.74 -168.46 6 1 ILE B 10 ? ? -14.20 104.73 7 1 ILE B 30 ? ? -61.04 -77.22 8 1 ASN B 32 ? ? 177.39 -13.51 9 1 GLU B 62 ? ? -96.81 33.12 10 1 GLN B 76 ? ? -64.36 98.93 11 1 GLU B 78 ? ? 69.74 -0.63 12 1 ASP B 103 ? ? -176.52 -175.75 13 1 PHE B 135 ? ? -177.57 132.18 14 1 SER B 143 ? ? -37.96 -36.12 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASN _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 58 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 59 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 140.54 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2016 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id L _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; 700 ; SHEET DETERMINATION METHOD: AUTHOR PROVIDED. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A THR 3 ? A THR 3 4 1 Y 1 A PRO 4 ? A PRO 4 5 1 Y 1 A ASN 5 ? A ASN 5 6 1 Y 1 A LYS 6 ? A LYS 6 7 1 Y 1 A ASP 7 ? A ASP 7 8 1 Y 1 A ASP 8 ? A ASP 8 9 1 Y 1 A ASN 53 ? A ASN 53 10 1 Y 1 A TRP 54 ? A TRP 54 11 1 Y 1 A ALA 55 ? A ALA 55 12 1 Y 1 A GLU 56 ? A GLU 56 13 1 Y 1 A ASP 57 ? A ASP 57 14 1 Y 1 A SER 142 ? A SER 142 15 1 Y 1 A SER 143 ? A SER 143 16 1 Y 1 A PHE 144 ? A PHE 144 17 1 Y 1 A GLU 145 ? A GLU 145 18 1 Y 1 A TYR 146 ? A TYR 146 19 1 Y 1 A ASN 147 ? A ASN 147 20 1 Y 1 A GLU 148 ? A GLU 148 21 1 Y 1 B MET 1 ? B MET 1 22 1 Y 1 B ASP 2 ? B ASP 2 23 1 Y 1 B THR 3 ? B THR 3 24 1 Y 1 B PRO 4 ? B PRO 4 25 1 Y 1 B ASN 5 ? B ASN 5 26 1 Y 1 B LYS 6 ? B LYS 6 27 1 Y 1 B ASP 7 ? B ASP 7 28 1 Y 1 B ASP 8 ? B ASP 8 29 1 Y 1 B GLU 148 ? B GLU 148 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 GOL C1 C N N 138 GOL O1 O N N 139 GOL C2 C N N 140 GOL O2 O N N 141 GOL C3 C N N 142 GOL O3 O N N 143 GOL H11 H N N 144 GOL H12 H N N 145 GOL HO1 H N N 146 GOL H2 H N N 147 GOL HO2 H N N 148 GOL H31 H N N 149 GOL H32 H N N 150 GOL HO3 H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 ILE N N N N 176 ILE CA C N S 177 ILE C C N N 178 ILE O O N N 179 ILE CB C N S 180 ILE CG1 C N N 181 ILE CG2 C N N 182 ILE CD1 C N N 183 ILE OXT O N N 184 ILE H H N N 185 ILE H2 H N N 186 ILE HA H N N 187 ILE HB H N N 188 ILE HG12 H N N 189 ILE HG13 H N N 190 ILE HG21 H N N 191 ILE HG22 H N N 192 ILE HG23 H N N 193 ILE HD11 H N N 194 ILE HD12 H N N 195 ILE HD13 H N N 196 ILE HXT H N N 197 LEU N N N N 198 LEU CA C N S 199 LEU C C N N 200 LEU O O N N 201 LEU CB C N N 202 LEU CG C N N 203 LEU CD1 C N N 204 LEU CD2 C N N 205 LEU OXT O N N 206 LEU H H N N 207 LEU H2 H N N 208 LEU HA H N N 209 LEU HB2 H N N 210 LEU HB3 H N N 211 LEU HG H N N 212 LEU HD11 H N N 213 LEU HD12 H N N 214 LEU HD13 H N N 215 LEU HD21 H N N 216 LEU HD22 H N N 217 LEU HD23 H N N 218 LEU HXT H N N 219 LYS N N N N 220 LYS CA C N S 221 LYS C C N N 222 LYS O O N N 223 LYS CB C N N 224 LYS CG C N N 225 LYS CD C N N 226 LYS CE C N N 227 LYS NZ N N N 228 LYS OXT O N N 229 LYS H H N N 230 LYS H2 H N N 231 LYS HA H N N 232 LYS HB2 H N N 233 LYS HB3 H N N 234 LYS HG2 H N N 235 LYS HG3 H N N 236 LYS HD2 H N N 237 LYS HD3 H N N 238 LYS HE2 H N N 239 LYS HE3 H N N 240 LYS HZ1 H N N 241 LYS HZ2 H N N 242 LYS HZ3 H N N 243 LYS HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 NI NI NI N N 265 PHE N N N N 266 PHE CA C N S 267 PHE C C N N 268 PHE O O N N 269 PHE CB C N N 270 PHE CG C Y N 271 PHE CD1 C Y N 272 PHE CD2 C Y N 273 PHE CE1 C Y N 274 PHE CE2 C Y N 275 PHE CZ C Y N 276 PHE OXT O N N 277 PHE H H N N 278 PHE H2 H N N 279 PHE HA H N N 280 PHE HB2 H N N 281 PHE HB3 H N N 282 PHE HD1 H N N 283 PHE HD2 H N N 284 PHE HE1 H N N 285 PHE HE2 H N N 286 PHE HZ H N N 287 PHE HXT H N N 288 PRO N N N N 289 PRO CA C N S 290 PRO C C N N 291 PRO O O N N 292 PRO CB C N N 293 PRO CG C N N 294 PRO CD C N N 295 PRO OXT O N N 296 PRO H H N N 297 PRO HA H N N 298 PRO HB2 H N N 299 PRO HB3 H N N 300 PRO HG2 H N N 301 PRO HG3 H N N 302 PRO HD2 H N N 303 PRO HD3 H N N 304 PRO HXT H N N 305 SER N N N N 306 SER CA C N S 307 SER C C N N 308 SER O O N N 309 SER CB C N N 310 SER OG O N N 311 SER OXT O N N 312 SER H H N N 313 SER H2 H N N 314 SER HA H N N 315 SER HB2 H N N 316 SER HB3 H N N 317 SER HG H N N 318 SER HXT H N N 319 THR N N N N 320 THR CA C N S 321 THR C C N N 322 THR O O N N 323 THR CB C N R 324 THR OG1 O N N 325 THR CG2 C N N 326 THR OXT O N N 327 THR H H N N 328 THR H2 H N N 329 THR HA H N N 330 THR HB H N N 331 THR HG1 H N N 332 THR HG21 H N N 333 THR HG22 H N N 334 THR HG23 H N N 335 THR HXT H N N 336 TRP N N N N 337 TRP CA C N S 338 TRP C C N N 339 TRP O O N N 340 TRP CB C N N 341 TRP CG C Y N 342 TRP CD1 C Y N 343 TRP CD2 C Y N 344 TRP NE1 N Y N 345 TRP CE2 C Y N 346 TRP CE3 C Y N 347 TRP CZ2 C Y N 348 TRP CZ3 C Y N 349 TRP CH2 C Y N 350 TRP OXT O N N 351 TRP H H N N 352 TRP H2 H N N 353 TRP HA H N N 354 TRP HB2 H N N 355 TRP HB3 H N N 356 TRP HD1 H N N 357 TRP HE1 H N N 358 TRP HE3 H N N 359 TRP HZ2 H N N 360 TRP HZ3 H N N 361 TRP HH2 H N N 362 TRP HXT H N N 363 TYR N N N N 364 TYR CA C N S 365 TYR C C N N 366 TYR O O N N 367 TYR CB C N N 368 TYR CG C Y N 369 TYR CD1 C Y N 370 TYR CD2 C Y N 371 TYR CE1 C Y N 372 TYR CE2 C Y N 373 TYR CZ C Y N 374 TYR OH O N N 375 TYR OXT O N N 376 TYR H H N N 377 TYR H2 H N N 378 TYR HA H N N 379 TYR HB2 H N N 380 TYR HB3 H N N 381 TYR HD1 H N N 382 TYR HD2 H N N 383 TYR HE1 H N N 384 TYR HE2 H N N 385 TYR HH H N N 386 TYR HXT H N N 387 VAL N N N N 388 VAL CA C N S 389 VAL C C N N 390 VAL O O N N 391 VAL CB C N N 392 VAL CG1 C N N 393 VAL CG2 C N N 394 VAL OXT O N N 395 VAL H H N N 396 VAL H2 H N N 397 VAL HA H N N 398 VAL HB H N N 399 VAL HG11 H N N 400 VAL HG12 H N N 401 VAL HG13 H N N 402 VAL HG21 H N N 403 VAL HG22 H N N 404 VAL HG23 H N N 405 VAL HXT H N N 406 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'NIKR FROM HELICOBACTER PYLORI SOLVED BY SAD METHOD USING MERCURY DERIVATIVE' # _atom_sites.entry_id 2CAJ _atom_sites.fract_transf_matrix[1][1] 0.013967 _atom_sites.fract_transf_matrix[1][2] 0.008064 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016128 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004370 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N NI O S # loop_