HEADER OXIDOREDUCTASE 23-JAN-06 2CDC TITLE SULFOLOBUS SOLFATARICUS GLUCOSE DEHYDROGENASE 1 IN COMPLEX WITH NADP TITLE 2 AND XYLOSE CAVEAT 2CDC THR D 189 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE DEHYDROGENASE GLUCOSE 1-DEHYDROGENASE, DHG-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.1.1.47; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS GLUCOSE DEHYDROGENASE, REDUCTASE, OXIDOREDUCTASE, MDR FAMILY EXPDTA X-RAY DIFFRACTION AUTHOR C.C.MILBURN,H.J.LAMBLE,A.THEODOSSIS,D.W.HOUGH,M.J.DANSON,G.L.TAYLOR REVDAT 7 06-NOV-24 2CDC 1 REMARK REVDAT 6 13-DEC-23 2CDC 1 HETSYN REVDAT 5 29-JUL-20 2CDC 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 28-FEB-18 2CDC 1 SOURCE JRNL ATOM REVDAT 3 24-FEB-09 2CDC 1 VERSN REVDAT 2 24-MAY-06 2CDC 1 JRNL REVDAT 1 22-MAR-06 2CDC 0 JRNL AUTH C.C.MILBURN,H.J.LAMBLE,A.THEODOSSIS,S.D.BULL,D.W.HOUGH, JRNL AUTH 2 M.J.DANSON,G.L.TAYLOR JRNL TITL THE STRUCTURAL BASIS OF SUBSTRATE PROMISCUITY IN GLUCOSE JRNL TITL 2 DEHYDROGENASE FROM THE HYPERTHERMOPHILIC ARCHAEON SULFOLOBUS JRNL TITL 3 SOLFATARICUS. JRNL REF J. BIOL. CHEM. V. 281 14796 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16556607 JRNL DOI 10.1074/JBC.M601334200 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 138.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 240504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 12721 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 14062 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 700 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11288 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 312 REMARK 3 SOLVENT ATOMS : 1580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.14000 REMARK 3 B22 (A**2) : 0.64000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.376 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12290 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16681 ; 1.325 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1470 ; 5.668 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 527 ;39.160 ;24.763 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2261 ;14.227 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;17.352 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1936 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8908 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 6592 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 8277 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1436 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.159 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 40 ; 0.134 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7529 ; 0.696 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11934 ; 1.085 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5414 ; 1.623 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4747 ; 2.402 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. DISORDERED LOOP REGIONS ARE DELETED FROM PDB FILE. REMARK 3 DISORDERED SIDECHAINS ARE INDICATED BY AND OCCUPANCY OF 0.01 REMARK 4 REMARK 4 2CDC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1290027413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 191673 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 41.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2CD9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8 % PEG 8000, 0.1 M TRIS (PH 8.0), 4.5 REMARK 280 % (V/V) PROPAN-2-OL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.51600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, THR 41 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, THR 41 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN C, THR 41 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN D, THR 41 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 51 REMARK 465 LEU A 52 REMARK 465 SER A 53 REMARK 465 THR A 54 REMARK 465 LEU A 55 REMARK 465 PRO A 56 REMARK 465 LYS A 57 REMARK 465 THR B 51 REMARK 465 LEU B 52 REMARK 465 SER B 53 REMARK 465 THR B 54 REMARK 465 LEU B 55 REMARK 465 PRO B 56 REMARK 465 LYS B 57 REMARK 465 THR C 51 REMARK 465 LEU C 52 REMARK 465 SER C 53 REMARK 465 THR C 54 REMARK 465 LEU C 55 REMARK 465 PRO C 56 REMARK 465 LYS C 57 REMARK 465 THR D 51 REMARK 465 LEU D 52 REMARK 465 SER D 53 REMARK 465 THR D 54 REMARK 465 LEU D 55 REMARK 465 PRO D 56 REMARK 465 LYS D 57 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 189 O HOH B 2232 1.78 REMARK 500 O THR C 254 O HOH C 2294 1.79 REMARK 500 O THR D 254 O HOH D 2279 1.86 REMARK 500 O HOH B 2194 O HOH B 2199 1.98 REMARK 500 O THR A 254 O HOH A 2251 2.01 REMARK 500 O THR B 254 O HOH B 2296 2.02 REMARK 500 OG1 THR D 189 O3B NAP D 1368 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ILE A 95 CG1 ILE A 95 CD1 0.935 REMARK 500 ILE A 95 CG1 ILE A 95 CD1 1.376 REMARK 500 THR C 189 CA THR C 189 C 0.304 REMARK 500 THR C 189 CA THR C 189 C -0.185 REMARK 500 THR C 254 CA THR C 254 C 0.203 REMARK 500 THR C 254 CA THR C 254 C 0.227 REMARK 500 GLY C 255 N GLY C 255 CA 0.223 REMARK 500 THR D 189 N THR D 189 CA 0.614 REMARK 500 THR D 189 N THR D 189 CA -0.359 REMARK 500 THR D 189 CA THR D 189 CB 0.522 REMARK 500 THR D 189 CA THR D 189 CB 0.164 REMARK 500 GLY D 190 N GLY D 190 CA 0.420 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 95 CG1 - CB - CG2 ANGL. DEV. = -45.0 DEGREES REMARK 500 ILE A 95 CB - CG1 - CD1 ANGL. DEV. = -35.3 DEGREES REMARK 500 THR C 189 CB - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 THR C 189 CB - CA - C ANGL. DEV. = 25.3 DEGREES REMARK 500 THR C 189 N - CA - C ANGL. DEV. = -23.6 DEGREES REMARK 500 PRO C 191 C - N - CA ANGL. DEV. = -29.9 DEGREES REMARK 500 PRO C 191 C - N - CD ANGL. DEV. = 28.8 DEGREES REMARK 500 THR C 254 CB - CA - C ANGL. DEV. = -22.1 DEGREES REMARK 500 THR C 254 N - CA - C ANGL. DEV. = 18.2 DEGREES REMARK 500 THR C 254 N - CA - C ANGL. DEV. = -26.5 DEGREES REMARK 500 THR C 254 CA - C - O ANGL. DEV. = 13.9 DEGREES REMARK 500 THR C 254 CA - C - O ANGL. DEV. = 13.2 DEGREES REMARK 500 THR C 254 CA - C - N ANGL. DEV. = -16.2 DEGREES REMARK 500 THR C 254 CA - C - N ANGL. DEV. = -12.2 DEGREES REMARK 500 GLY C 255 C - N - CA ANGL. DEV. = -13.0 DEGREES REMARK 500 GLY C 255 N - CA - C ANGL. DEV. = -23.7 DEGREES REMARK 500 THR D 189 C - N - CA ANGL. DEV. = -17.6 DEGREES REMARK 500 THR D 189 C - N - CA ANGL. DEV. = 33.0 DEGREES REMARK 500 THR D 189 CB - CA - C ANGL. DEV. = -29.5 DEGREES REMARK 500 THR D 189 N - CA - CB ANGL. DEV. = -34.0 DEGREES REMARK 500 THR D 189 N - CA - CB ANGL. DEV. = 12.3 DEGREES REMARK 500 THR D 189 CA - CB - OG1 ANGL. DEV. = 22.8 DEGREES REMARK 500 THR D 189 CA - CB - OG1 ANGL. DEV. = -28.7 DEGREES REMARK 500 GLY D 190 C - N - CA ANGL. DEV. = -16.3 DEGREES REMARK 500 GLY D 190 C - N - CA ANGL. DEV. = -19.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 117 -48.70 -132.54 REMARK 500 ILE A 117 -53.41 -132.54 REMARK 500 LYS A 119 -20.97 70.13 REMARK 500 LYS A 119 -20.97 70.92 REMARK 500 THR A 189 -145.95 -78.46 REMARK 500 PRO A 191 -74.44 -26.26 REMARK 500 ARG A 213 177.90 177.98 REMARK 500 ALA A 256 -150.64 -110.10 REMARK 500 ASN A 307 123.21 67.13 REMARK 500 ASP A 343 74.70 -100.88 REMARK 500 ILE A 359 -67.34 -107.34 REMARK 500 HIS B 77 -119.36 54.71 REMARK 500 ILE B 117 -44.72 -131.93 REMARK 500 LYS B 119 -12.56 68.69 REMARK 500 THR B 189 -125.08 -96.57 REMARK 500 ARG B 213 174.88 178.28 REMARK 500 ALA B 256 -167.04 -73.27 REMARK 500 ASN B 307 119.39 67.13 REMARK 500 ILE B 359 -67.36 -104.61 REMARK 500 SER C 75 99.72 -69.56 REMARK 500 ILE C 117 -49.62 -139.33 REMARK 500 LYS C 119 -9.34 65.39 REMARK 500 ARG C 213 174.33 179.70 REMARK 500 ALA C 256 -148.40 -80.99 REMARK 500 ALA C 256 -168.65 -105.47 REMARK 500 ASN C 307 120.89 68.37 REMARK 500 ILE C 359 -67.36 -107.44 REMARK 500 HIS D 77 -126.04 52.65 REMARK 500 ILE D 117 -48.91 -135.63 REMARK 500 LYS D 119 -7.93 72.73 REMARK 500 THR D 189 -145.68 -112.06 REMARK 500 ARG D 212 48.69 -80.93 REMARK 500 ALA D 256 -157.00 -110.53 REMARK 500 ASN D 307 119.25 69.28 REMARK 500 ILE D 359 -64.04 -106.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY C 190 -10.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2001 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A2003 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A2057 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A2104 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A2109 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A2129 DISTANCE = 7.63 ANGSTROMS REMARK 525 HOH A2130 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A2133 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B2003 DISTANCE = 7.28 ANGSTROMS REMARK 525 HOH B2005 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B2008 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH B2012 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B2013 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B2014 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH B2025 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH B2175 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH C2054 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH D2059 DISTANCE = 7.24 ANGSTROMS REMARK 525 HOH D2095 DISTANCE = 6.46 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1371 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 39 SG REMARK 620 2 HIS A 66 NE2 106.0 REMARK 620 3 GLU A 67 OE2 114.3 123.3 REMARK 620 4 HOH A2376 O 120.2 102.2 90.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1372 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 93 SG REMARK 620 2 CYS A 96 SG 114.0 REMARK 620 3 CYS A 99 SG 112.0 101.4 REMARK 620 4 CYS A 107 SG 107.8 115.7 105.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1371 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 39 SG REMARK 620 2 HIS B 66 NE2 106.4 REMARK 620 3 GLU B 67 OE2 113.0 120.0 REMARK 620 4 HOH B2401 O 119.1 103.8 94.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1372 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 93 SG REMARK 620 2 CYS B 96 SG 113.9 REMARK 620 3 CYS B 99 SG 114.6 103.1 REMARK 620 4 CYS B 107 SG 106.6 114.5 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1371 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 39 SG REMARK 620 2 HIS C 66 NE2 106.1 REMARK 620 3 GLU C 67 OE2 110.9 123.3 REMARK 620 4 HOH C2411 O 123.0 101.8 92.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1372 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 93 SG REMARK 620 2 CYS C 96 SG 111.4 REMARK 620 3 CYS C 99 SG 114.3 102.7 REMARK 620 4 CYS C 107 SG 107.6 115.6 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1372 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 39 SG REMARK 620 2 HIS D 66 NE2 106.0 REMARK 620 3 GLU D 67 OE2 112.2 120.5 REMARK 620 4 HOH D2392 O 119.9 104.8 93.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1373 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 93 SG REMARK 620 2 CYS D 96 SG 113.0 REMARK 620 3 CYS D 99 SG 113.3 101.5 REMARK 620 4 CYS D 107 SG 108.0 116.1 104.6 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CD9 RELATED DB: PDB REMARK 900 SULFOLOBUS SOLFATARICUS GLUCOSE DEHYDROGENASE 1 - APO FORM REMARK 900 RELATED ID: 2CDA RELATED DB: PDB REMARK 900 SULFOLOBUS SOLFATARICUS GLUCOSE DEHYDROGENASE 1 IN COMPLEX WITH NADP REMARK 900 RELATED ID: 2CDB RELATED DB: PDB REMARK 900 SULFOLOBUS SOLFATARICUS GLUCOSE DEHYDROGENASE 1 IN COMPLEX WITH REMARK 900 NADP AND GLUCOSE REMARK 999 REMARK 999 SEQUENCE REMARK 999 MUTATION OF THR41 TO ALA DBREF 2CDC A 1 366 UNP O93715 O93715_SULSO 1 366 DBREF 2CDC B 1 366 UNP O93715 O93715_SULSO 1 366 DBREF 2CDC C 1 366 UNP O93715 O93715_SULSO 1 366 DBREF 2CDC D 1 366 UNP O93715 O93715_SULSO 1 366 SEQADV 2CDC ALA A 41 UNP O93715 THR 41 ENGINEERED MUTATION SEQADV 2CDC ALA B 41 UNP O93715 THR 41 ENGINEERED MUTATION SEQADV 2CDC ALA C 41 UNP O93715 THR 41 ENGINEERED MUTATION SEQADV 2CDC ALA D 41 UNP O93715 THR 41 ENGINEERED MUTATION SEQRES 1 A 366 MET LYS ALA ILE ILE VAL LYS PRO PRO ASN ALA GLY VAL SEQRES 2 A 366 GLN VAL LYS ASP VAL ASP GLU LYS LYS LEU ASP SER TYR SEQRES 3 A 366 GLY LYS ILE LYS ILE ARG THR ILE TYR ASN GLY ILE CYS SEQRES 4 A 366 GLY ALA ASP ARG GLU ILE VAL ASN GLY LYS LEU THR LEU SEQRES 5 A 366 SER THR LEU PRO LYS GLY LYS ASP PHE LEU VAL LEU GLY SEQRES 6 A 366 HIS GLU ALA ILE GLY VAL VAL GLU GLU SER TYR HIS GLY SEQRES 7 A 366 PHE SER GLN GLY ASP LEU VAL MET PRO VAL ASN ARG ARG SEQRES 8 A 366 GLY CYS GLY ILE CYS ARG ASN CYS LEU VAL GLY ARG PRO SEQRES 9 A 366 ASP PHE CYS GLU THR GLY GLU PHE GLY GLU ALA GLY ILE SEQRES 10 A 366 HIS LYS MET ASP GLY PHE MET ARG GLU TRP TRP TYR ASP SEQRES 11 A 366 ASP PRO LYS TYR LEU VAL LYS ILE PRO LYS SER ILE GLU SEQRES 12 A 366 ASP ILE GLY ILE LEU ALA GLN PRO LEU ALA ASP ILE GLU SEQRES 13 A 366 LYS SER ILE GLU GLU ILE LEU GLU VAL GLN LYS ARG VAL SEQRES 14 A 366 PRO VAL TRP THR CYS ASP ASP GLY THR LEU ASN CYS ARG SEQRES 15 A 366 LYS VAL LEU VAL VAL GLY THR GLY PRO ILE GLY VAL LEU SEQRES 16 A 366 PHE THR LEU LEU PHE ARG THR TYR GLY LEU GLU VAL TRP SEQRES 17 A 366 MET ALA ASN ARG ARG GLU PRO THR GLU VAL GLU GLN THR SEQRES 18 A 366 VAL ILE GLU GLU THR LYS THR ASN TYR TYR ASN SER SER SEQRES 19 A 366 ASN GLY TYR ASP LYS LEU LYS ASP SER VAL GLY LYS PHE SEQRES 20 A 366 ASP VAL ILE ILE ASP ALA THR GLY ALA ASP VAL ASN ILE SEQRES 21 A 366 LEU GLY ASN VAL ILE PRO LEU LEU GLY ARG ASN GLY VAL SEQRES 22 A 366 LEU GLY LEU PHE GLY PHE SER THR SER GLY SER VAL PRO SEQRES 23 A 366 LEU ASP TYR LYS THR LEU GLN GLU ILE VAL HIS THR ASN SEQRES 24 A 366 LYS THR ILE ILE GLY LEU VAL ASN GLY GLN LYS PRO HIS SEQRES 25 A 366 PHE GLN GLN ALA VAL VAL HIS LEU ALA SER TRP LYS THR SEQRES 26 A 366 LEU TYR PRO LYS ALA ALA LYS MET LEU ILE THR LYS THR SEQRES 27 A 366 VAL SER ILE ASN ASP GLU LYS GLU LEU LEU LYS VAL LEU SEQRES 28 A 366 ARG GLU LYS GLU HIS GLY GLU ILE LYS ILE ARG ILE LEU SEQRES 29 A 366 TRP GLU SEQRES 1 B 366 MET LYS ALA ILE ILE VAL LYS PRO PRO ASN ALA GLY VAL SEQRES 2 B 366 GLN VAL LYS ASP VAL ASP GLU LYS LYS LEU ASP SER TYR SEQRES 3 B 366 GLY LYS ILE LYS ILE ARG THR ILE TYR ASN GLY ILE CYS SEQRES 4 B 366 GLY ALA ASP ARG GLU ILE VAL ASN GLY LYS LEU THR LEU SEQRES 5 B 366 SER THR LEU PRO LYS GLY LYS ASP PHE LEU VAL LEU GLY SEQRES 6 B 366 HIS GLU ALA ILE GLY VAL VAL GLU GLU SER TYR HIS GLY SEQRES 7 B 366 PHE SER GLN GLY ASP LEU VAL MET PRO VAL ASN ARG ARG SEQRES 8 B 366 GLY CYS GLY ILE CYS ARG ASN CYS LEU VAL GLY ARG PRO SEQRES 9 B 366 ASP PHE CYS GLU THR GLY GLU PHE GLY GLU ALA GLY ILE SEQRES 10 B 366 HIS LYS MET ASP GLY PHE MET ARG GLU TRP TRP TYR ASP SEQRES 11 B 366 ASP PRO LYS TYR LEU VAL LYS ILE PRO LYS SER ILE GLU SEQRES 12 B 366 ASP ILE GLY ILE LEU ALA GLN PRO LEU ALA ASP ILE GLU SEQRES 13 B 366 LYS SER ILE GLU GLU ILE LEU GLU VAL GLN LYS ARG VAL SEQRES 14 B 366 PRO VAL TRP THR CYS ASP ASP GLY THR LEU ASN CYS ARG SEQRES 15 B 366 LYS VAL LEU VAL VAL GLY THR GLY PRO ILE GLY VAL LEU SEQRES 16 B 366 PHE THR LEU LEU PHE ARG THR TYR GLY LEU GLU VAL TRP SEQRES 17 B 366 MET ALA ASN ARG ARG GLU PRO THR GLU VAL GLU GLN THR SEQRES 18 B 366 VAL ILE GLU GLU THR LYS THR ASN TYR TYR ASN SER SER SEQRES 19 B 366 ASN GLY TYR ASP LYS LEU LYS ASP SER VAL GLY LYS PHE SEQRES 20 B 366 ASP VAL ILE ILE ASP ALA THR GLY ALA ASP VAL ASN ILE SEQRES 21 B 366 LEU GLY ASN VAL ILE PRO LEU LEU GLY ARG ASN GLY VAL SEQRES 22 B 366 LEU GLY LEU PHE GLY PHE SER THR SER GLY SER VAL PRO SEQRES 23 B 366 LEU ASP TYR LYS THR LEU GLN GLU ILE VAL HIS THR ASN SEQRES 24 B 366 LYS THR ILE ILE GLY LEU VAL ASN GLY GLN LYS PRO HIS SEQRES 25 B 366 PHE GLN GLN ALA VAL VAL HIS LEU ALA SER TRP LYS THR SEQRES 26 B 366 LEU TYR PRO LYS ALA ALA LYS MET LEU ILE THR LYS THR SEQRES 27 B 366 VAL SER ILE ASN ASP GLU LYS GLU LEU LEU LYS VAL LEU SEQRES 28 B 366 ARG GLU LYS GLU HIS GLY GLU ILE LYS ILE ARG ILE LEU SEQRES 29 B 366 TRP GLU SEQRES 1 C 366 MET LYS ALA ILE ILE VAL LYS PRO PRO ASN ALA GLY VAL SEQRES 2 C 366 GLN VAL LYS ASP VAL ASP GLU LYS LYS LEU ASP SER TYR SEQRES 3 C 366 GLY LYS ILE LYS ILE ARG THR ILE TYR ASN GLY ILE CYS SEQRES 4 C 366 GLY ALA ASP ARG GLU ILE VAL ASN GLY LYS LEU THR LEU SEQRES 5 C 366 SER THR LEU PRO LYS GLY LYS ASP PHE LEU VAL LEU GLY SEQRES 6 C 366 HIS GLU ALA ILE GLY VAL VAL GLU GLU SER TYR HIS GLY SEQRES 7 C 366 PHE SER GLN GLY ASP LEU VAL MET PRO VAL ASN ARG ARG SEQRES 8 C 366 GLY CYS GLY ILE CYS ARG ASN CYS LEU VAL GLY ARG PRO SEQRES 9 C 366 ASP PHE CYS GLU THR GLY GLU PHE GLY GLU ALA GLY ILE SEQRES 10 C 366 HIS LYS MET ASP GLY PHE MET ARG GLU TRP TRP TYR ASP SEQRES 11 C 366 ASP PRO LYS TYR LEU VAL LYS ILE PRO LYS SER ILE GLU SEQRES 12 C 366 ASP ILE GLY ILE LEU ALA GLN PRO LEU ALA ASP ILE GLU SEQRES 13 C 366 LYS SER ILE GLU GLU ILE LEU GLU VAL GLN LYS ARG VAL SEQRES 14 C 366 PRO VAL TRP THR CYS ASP ASP GLY THR LEU ASN CYS ARG SEQRES 15 C 366 LYS VAL LEU VAL VAL GLY THR GLY PRO ILE GLY VAL LEU SEQRES 16 C 366 PHE THR LEU LEU PHE ARG THR TYR GLY LEU GLU VAL TRP SEQRES 17 C 366 MET ALA ASN ARG ARG GLU PRO THR GLU VAL GLU GLN THR SEQRES 18 C 366 VAL ILE GLU GLU THR LYS THR ASN TYR TYR ASN SER SER SEQRES 19 C 366 ASN GLY TYR ASP LYS LEU LYS ASP SER VAL GLY LYS PHE SEQRES 20 C 366 ASP VAL ILE ILE ASP ALA THR GLY ALA ASP VAL ASN ILE SEQRES 21 C 366 LEU GLY ASN VAL ILE PRO LEU LEU GLY ARG ASN GLY VAL SEQRES 22 C 366 LEU GLY LEU PHE GLY PHE SER THR SER GLY SER VAL PRO SEQRES 23 C 366 LEU ASP TYR LYS THR LEU GLN GLU ILE VAL HIS THR ASN SEQRES 24 C 366 LYS THR ILE ILE GLY LEU VAL ASN GLY GLN LYS PRO HIS SEQRES 25 C 366 PHE GLN GLN ALA VAL VAL HIS LEU ALA SER TRP LYS THR SEQRES 26 C 366 LEU TYR PRO LYS ALA ALA LYS MET LEU ILE THR LYS THR SEQRES 27 C 366 VAL SER ILE ASN ASP GLU LYS GLU LEU LEU LYS VAL LEU SEQRES 28 C 366 ARG GLU LYS GLU HIS GLY GLU ILE LYS ILE ARG ILE LEU SEQRES 29 C 366 TRP GLU SEQRES 1 D 366 MET LYS ALA ILE ILE VAL LYS PRO PRO ASN ALA GLY VAL SEQRES 2 D 366 GLN VAL LYS ASP VAL ASP GLU LYS LYS LEU ASP SER TYR SEQRES 3 D 366 GLY LYS ILE LYS ILE ARG THR ILE TYR ASN GLY ILE CYS SEQRES 4 D 366 GLY ALA ASP ARG GLU ILE VAL ASN GLY LYS LEU THR LEU SEQRES 5 D 366 SER THR LEU PRO LYS GLY LYS ASP PHE LEU VAL LEU GLY SEQRES 6 D 366 HIS GLU ALA ILE GLY VAL VAL GLU GLU SER TYR HIS GLY SEQRES 7 D 366 PHE SER GLN GLY ASP LEU VAL MET PRO VAL ASN ARG ARG SEQRES 8 D 366 GLY CYS GLY ILE CYS ARG ASN CYS LEU VAL GLY ARG PRO SEQRES 9 D 366 ASP PHE CYS GLU THR GLY GLU PHE GLY GLU ALA GLY ILE SEQRES 10 D 366 HIS LYS MET ASP GLY PHE MET ARG GLU TRP TRP TYR ASP SEQRES 11 D 366 ASP PRO LYS TYR LEU VAL LYS ILE PRO LYS SER ILE GLU SEQRES 12 D 366 ASP ILE GLY ILE LEU ALA GLN PRO LEU ALA ASP ILE GLU SEQRES 13 D 366 LYS SER ILE GLU GLU ILE LEU GLU VAL GLN LYS ARG VAL SEQRES 14 D 366 PRO VAL TRP THR CYS ASP ASP GLY THR LEU ASN CYS ARG SEQRES 15 D 366 LYS VAL LEU VAL VAL GLY THR GLY PRO ILE GLY VAL LEU SEQRES 16 D 366 PHE THR LEU LEU PHE ARG THR TYR GLY LEU GLU VAL TRP SEQRES 17 D 366 MET ALA ASN ARG ARG GLU PRO THR GLU VAL GLU GLN THR SEQRES 18 D 366 VAL ILE GLU GLU THR LYS THR ASN TYR TYR ASN SER SER SEQRES 19 D 366 ASN GLY TYR ASP LYS LEU LYS ASP SER VAL GLY LYS PHE SEQRES 20 D 366 ASP VAL ILE ILE ASP ALA THR GLY ALA ASP VAL ASN ILE SEQRES 21 D 366 LEU GLY ASN VAL ILE PRO LEU LEU GLY ARG ASN GLY VAL SEQRES 22 D 366 LEU GLY LEU PHE GLY PHE SER THR SER GLY SER VAL PRO SEQRES 23 D 366 LEU ASP TYR LYS THR LEU GLN GLU ILE VAL HIS THR ASN SEQRES 24 D 366 LYS THR ILE ILE GLY LEU VAL ASN GLY GLN LYS PRO HIS SEQRES 25 D 366 PHE GLN GLN ALA VAL VAL HIS LEU ALA SER TRP LYS THR SEQRES 26 D 366 LEU TYR PRO LYS ALA ALA LYS MET LEU ILE THR LYS THR SEQRES 27 D 366 VAL SER ILE ASN ASP GLU LYS GLU LEU LEU LYS VAL LEU SEQRES 28 D 366 ARG GLU LYS GLU HIS GLY GLU ILE LYS ILE ARG ILE LEU SEQRES 29 D 366 TRP GLU HET NAP A1367 48 HET XYS A1368 10 HET XYP A1369 10 HET XYS A1370 10 HET ZN A1371 1 HET ZN A1372 1 HET EDO B1367 4 HET NAP B1368 48 HET XYP B1369 10 HET XYS B1370 10 HET ZN B1371 1 HET ZN B1372 1 HET EDO C1367 4 HET NAP C1368 48 HET XYP C1369 10 HET XYS C1370 10 HET ZN C1371 1 HET ZN C1372 1 HET EDO D1367 4 HET NAP D1368 48 HET XYS D1369 10 HET XYP D1370 10 HET XYS D1371 10 HET ZN D1372 1 HET ZN D1373 1 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM XYS ALPHA-D-XYLOPYRANOSE HETNAM XYP BETA-D-XYLOPYRANOSE HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN XYS ALPHA-D-XYLOSE; D-XYLOSE; XYLOSE; XYLOPYRANOSE HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 NAP 4(C21 H28 N7 O17 P3) FORMUL 6 XYS 6(C5 H10 O5) FORMUL 7 XYP 4(C5 H10 O5) FORMUL 9 ZN 8(ZN 2+) FORMUL 11 EDO 3(C2 H6 O2) FORMUL 30 HOH *1580(H2 O) HELIX 1 1 ASP A 19 LEU A 23 5 5 HELIX 2 2 CYS A 39 ASN A 47 1 9 HELIX 3 3 CYS A 96 VAL A 101 1 6 HELIX 4 4 ARG A 103 CYS A 107 5 5 HELIX 5 5 ASP A 131 LYS A 133 5 3 HELIX 6 6 PRO A 139 GLU A 143 5 5 HELIX 7 7 ILE A 145 ILE A 147 5 3 HELIX 8 8 LEU A 148 GLN A 166 1 19 HELIX 9 9 LYS A 167 VAL A 169 5 3 HELIX 10 10 THR A 189 GLY A 204 1 16 HELIX 11 11 THR A 216 LYS A 227 1 12 HELIX 12 12 TYR A 237 GLY A 245 1 9 HELIX 13 13 VAL A 258 ILE A 265 1 8 HELIX 14 14 TYR A 289 THR A 298 1 10 HELIX 15 15 GLN A 309 TYR A 327 1 19 HELIX 16 16 TYR A 327 LYS A 332 1 6 HELIX 17 17 ASP A 343 GLU A 353 1 11 HELIX 18 18 ASP B 19 LEU B 23 5 5 HELIX 19 19 CYS B 39 ASN B 47 1 9 HELIX 20 20 CYS B 96 VAL B 101 1 6 HELIX 21 21 ARG B 103 CYS B 107 5 5 HELIX 22 22 ASP B 131 LYS B 133 5 3 HELIX 23 23 PRO B 139 GLU B 143 5 5 HELIX 24 24 ILE B 145 ILE B 147 5 3 HELIX 25 25 LEU B 148 GLN B 166 1 19 HELIX 26 26 LYS B 167 VAL B 169 5 3 HELIX 27 27 THR B 189 GLY B 204 1 16 HELIX 28 28 THR B 216 LYS B 227 1 12 HELIX 29 29 TYR B 237 GLY B 245 1 9 HELIX 30 30 VAL B 258 ILE B 265 1 8 HELIX 31 31 TYR B 289 THR B 298 1 10 HELIX 32 32 GLN B 309 TYR B 327 1 19 HELIX 33 33 TYR B 327 LYS B 332 1 6 HELIX 34 34 ASP B 343 GLU B 353 1 11 HELIX 35 35 ASP C 19 LEU C 23 5 5 HELIX 36 36 CYS C 39 ASN C 47 1 9 HELIX 37 37 CYS C 96 VAL C 101 1 6 HELIX 38 38 ARG C 103 CYS C 107 5 5 HELIX 39 39 ASP C 131 LYS C 133 5 3 HELIX 40 40 PRO C 139 GLU C 143 5 5 HELIX 41 41 ILE C 145 ILE C 147 5 3 HELIX 42 42 LEU C 148 GLN C 166 1 19 HELIX 43 43 LYS C 167 VAL C 169 5 3 HELIX 44 44 GLY C 190 GLY C 204 1 15 HELIX 45 45 THR C 216 LYS C 227 1 12 HELIX 46 46 TYR C 237 GLY C 245 1 9 HELIX 47 47 VAL C 258 ILE C 265 1 8 HELIX 48 48 TYR C 289 THR C 298 1 10 HELIX 49 49 GLN C 309 TYR C 327 1 19 HELIX 50 50 TYR C 327 LYS C 332 1 6 HELIX 51 51 ASP C 343 GLU C 353 1 11 HELIX 52 52 ASP D 19 LEU D 23 5 5 HELIX 53 53 CYS D 39 ASN D 47 1 9 HELIX 54 54 CYS D 96 VAL D 101 1 6 HELIX 55 55 ARG D 103 CYS D 107 5 5 HELIX 56 56 ASP D 131 LYS D 133 5 3 HELIX 57 57 PRO D 139 GLU D 143 5 5 HELIX 58 58 ILE D 145 ILE D 147 5 3 HELIX 59 59 LEU D 148 GLN D 166 1 19 HELIX 60 60 LYS D 167 VAL D 169 5 3 HELIX 61 61 GLY D 190 GLY D 204 1 15 HELIX 62 62 THR D 216 LYS D 227 1 12 HELIX 63 63 TYR D 237 GLY D 245 1 9 HELIX 64 64 VAL D 258 ILE D 265 1 8 HELIX 65 65 TYR D 289 THR D 298 1 10 HELIX 66 66 GLN D 309 TYR D 327 1 19 HELIX 67 67 TYR D 327 LYS D 332 1 6 HELIX 68 68 ASP D 343 GLU D 353 1 11 SHEET 1 AA 3 GLN A 14 ASP A 17 0 SHEET 2 AA 3 LYS A 2 VAL A 6 -1 O ALA A 3 N LYS A 16 SHEET 3 AA 3 LEU A 62 VAL A 63 -1 O LEU A 62 N VAL A 6 SHEET 1 AB 5 TRP A 127 ASP A 130 0 SHEET 2 AB 5 ILE A 29 ILE A 38 -1 O ILE A 29 N ASP A 130 SHEET 3 AB 5 GLU A 67 VAL A 72 -1 O GLU A 67 N GLY A 37 SHEET 4 AB 5 LEU A 84 PRO A 87 -1 O VAL A 85 N GLY A 70 SHEET 5 AB 5 LEU A 135 ILE A 138 -1 O VAL A 136 N MET A 86 SHEET 1 AC 4 TRP A 127 ASP A 130 0 SHEET 2 AC 4 ILE A 29 ILE A 38 -1 O ILE A 29 N ASP A 130 SHEET 3 AC 4 LYS A 360 LEU A 364 -1 O ILE A 361 N ILE A 38 SHEET 4 AC 4 ILE A 335 SER A 340 1 N THR A 336 O LYS A 360 SHEET 1 AD 2 ARG A 90 ARG A 91 0 SHEET 2 AD 2 GLY A 113 GLU A 114 -1 O GLY A 113 N ARG A 91 SHEET 1 AE12 ASN A 229 ASN A 232 0 SHEET 2 AE12 GLU A 206 ASN A 211 1 O VAL A 207 N ASN A 229 SHEET 3 AE12 LYS A 183 VAL A 187 1 O VAL A 184 N TRP A 208 SHEET 4 AE12 PHE A 247 ASP A 252 1 N ASP A 248 O LYS A 183 SHEET 5 AE12 LEU A 268 LEU A 276 1 N GLY A 269 O PHE A 247 SHEET 6 AE12 THR A 301 GLY A 304 1 O THR A 301 N LEU A 274 SHEET 7 AE12 THR C 301 GLY C 304 -1 O ILE C 302 N ILE A 302 SHEET 8 AE12 LEU C 268 LEU C 276 1 O GLY C 272 N THR C 301 SHEET 9 AE12 PHE C 247 ASP C 252 1 O PHE C 247 N GLY C 269 SHEET 10 AE12 LYS C 183 VAL C 187 1 O LYS C 183 N VAL C 249 SHEET 11 AE12 GLU C 206 ASN C 211 1 O GLU C 206 N VAL C 184 SHEET 12 AE12 ASN C 229 ASN C 232 1 O ASN C 229 N MET C 209 SHEET 1 AF 2 SER A 284 ASP A 288 0 SHEET 2 AF 2 SER C 284 ASP C 288 -1 O VAL C 285 N LEU A 287 SHEET 1 BA 3 GLN B 14 ASP B 17 0 SHEET 2 BA 3 LYS B 2 VAL B 6 -1 O ALA B 3 N LYS B 16 SHEET 3 BA 3 LEU B 62 VAL B 63 -1 O LEU B 62 N VAL B 6 SHEET 1 BB 5 TRP B 127 ASP B 130 0 SHEET 2 BB 5 ILE B 29 ILE B 38 -1 O ILE B 29 N ASP B 130 SHEET 3 BB 5 GLU B 67 VAL B 72 -1 O GLU B 67 N GLY B 37 SHEET 4 BB 5 LEU B 84 PRO B 87 -1 O VAL B 85 N GLY B 70 SHEET 5 BB 5 LEU B 135 ILE B 138 -1 O VAL B 136 N MET B 86 SHEET 1 BC 4 TRP B 127 ASP B 130 0 SHEET 2 BC 4 ILE B 29 ILE B 38 -1 O ILE B 29 N ASP B 130 SHEET 3 BC 4 LYS B 360 LEU B 364 -1 O ILE B 361 N ILE B 38 SHEET 4 BC 4 ILE B 335 SER B 340 1 N THR B 336 O LYS B 360 SHEET 1 BD 2 ARG B 90 ARG B 91 0 SHEET 2 BD 2 GLY B 113 GLU B 114 -1 O GLY B 113 N ARG B 91 SHEET 1 BE12 ASN B 229 ASN B 232 0 SHEET 2 BE12 GLU B 206 ASN B 211 1 O VAL B 207 N ASN B 229 SHEET 3 BE12 LYS B 183 VAL B 187 1 O VAL B 184 N TRP B 208 SHEET 4 BE12 PHE B 247 ASP B 252 1 N ASP B 248 O LYS B 183 SHEET 5 BE12 LEU B 268 LEU B 276 1 N GLY B 269 O PHE B 247 SHEET 6 BE12 THR B 301 GLY B 304 1 O THR B 301 N LEU B 274 SHEET 7 BE12 THR D 301 GLY D 304 -1 O ILE D 302 N ILE B 302 SHEET 8 BE12 LEU D 268 LEU D 276 1 O GLY D 272 N THR D 301 SHEET 9 BE12 PHE D 247 ASP D 252 1 O PHE D 247 N GLY D 269 SHEET 10 BE12 LYS D 183 VAL D 187 1 O LYS D 183 N VAL D 249 SHEET 11 BE12 GLU D 206 ASN D 211 1 O GLU D 206 N VAL D 184 SHEET 12 BE12 ASN D 229 ASN D 232 1 O ASN D 229 N MET D 209 SHEET 1 BF 2 SER B 284 ASP B 288 0 SHEET 2 BF 2 SER D 284 ASP D 288 -1 O VAL D 285 N LEU B 287 SHEET 1 CA 3 GLN C 14 ASP C 17 0 SHEET 2 CA 3 LYS C 2 VAL C 6 -1 O ALA C 3 N LYS C 16 SHEET 3 CA 3 LEU C 62 VAL C 63 -1 O LEU C 62 N VAL C 6 SHEET 1 CB 5 TRP C 127 ASP C 130 0 SHEET 2 CB 5 ILE C 29 ILE C 38 -1 O ILE C 29 N ASP C 130 SHEET 3 CB 5 GLU C 67 VAL C 72 -1 O GLU C 67 N GLY C 37 SHEET 4 CB 5 LEU C 84 PRO C 87 -1 O VAL C 85 N GLY C 70 SHEET 5 CB 5 LEU C 135 ILE C 138 -1 O VAL C 136 N MET C 86 SHEET 1 CC 4 TRP C 127 ASP C 130 0 SHEET 2 CC 4 ILE C 29 ILE C 38 -1 O ILE C 29 N ASP C 130 SHEET 3 CC 4 LYS C 360 LEU C 364 -1 O ILE C 361 N ILE C 38 SHEET 4 CC 4 ILE C 335 SER C 340 1 N THR C 336 O LYS C 360 SHEET 1 CD 2 ARG C 90 ARG C 91 0 SHEET 2 CD 2 GLY C 113 GLU C 114 -1 O GLY C 113 N ARG C 91 SHEET 1 DA 3 GLN D 14 ASP D 17 0 SHEET 2 DA 3 LYS D 2 VAL D 6 -1 O ALA D 3 N LYS D 16 SHEET 3 DA 3 LEU D 62 VAL D 63 -1 O LEU D 62 N VAL D 6 SHEET 1 DB 9 TRP D 127 ASP D 130 0 SHEET 2 DB 9 ILE D 29 ILE D 38 -1 O ILE D 29 N ASP D 130 SHEET 3 DB 9 LEU D 135 ILE D 138 0 SHEET 4 DB 9 LEU D 84 PRO D 87 -1 O LEU D 84 N ILE D 138 SHEET 5 DB 9 ALA D 68 VAL D 72 -1 O GLY D 70 N VAL D 85 SHEET 6 DB 9 ILE D 29 ILE D 38 -1 O ARG D 32 N VAL D 71 SHEET 7 DB 9 LYS D 337 SER D 340 0 SHEET 8 DB 9 ILE D 361 LEU D 364 1 O ARG D 362 N VAL D 339 SHEET 9 DB 9 ILE D 29 ILE D 38 -1 O ASN D 36 N ILE D 363 SHEET 1 DC 2 ARG D 90 ARG D 91 0 SHEET 2 DC 2 GLY D 113 GLU D 114 -1 O GLY D 113 N ARG D 91 SSBOND 1 CYS A 174 CYS A 181 1555 1555 2.04 SSBOND 2 CYS B 174 CYS B 181 1555 1555 2.02 SSBOND 3 CYS C 174 CYS C 181 1555 1555 2.04 SSBOND 4 CYS D 174 CYS D 181 1555 1555 2.02 LINK SG CYS A 39 ZN ZN A1371 1555 1555 2.29 LINK NE2 HIS A 66 ZN ZN A1371 1555 1555 2.05 LINK OE2 GLU A 67 ZN ZN A1371 1555 1555 2.02 LINK SG CYS A 93 ZN ZN A1372 1555 1555 2.34 LINK SG CYS A 96 ZN ZN A1372 1555 1555 2.41 LINK SG CYS A 99 ZN ZN A1372 1555 1555 2.31 LINK SG CYS A 107 ZN ZN A1372 1555 1555 2.42 LINK ZN ZN A1371 O HOH A2376 1555 1555 2.00 LINK SG CYS B 39 ZN ZN B1371 1555 1555 2.19 LINK NE2 HIS B 66 ZN ZN B1371 1555 1555 1.99 LINK OE2 GLU B 67 ZN ZN B1371 1555 1555 2.04 LINK SG CYS B 93 ZN ZN B1372 1555 1555 2.29 LINK SG CYS B 96 ZN ZN B1372 1555 1555 2.35 LINK SG CYS B 99 ZN ZN B1372 1555 1555 2.36 LINK SG CYS B 107 ZN ZN B1372 1555 1555 2.44 LINK ZN ZN B1371 O HOH B2401 1555 1555 1.98 LINK SG CYS C 39 ZN ZN C1371 1555 1555 2.19 LINK NE2 HIS C 66 ZN ZN C1371 1555 1555 2.06 LINK OE2 GLU C 67 ZN ZN C1371 1555 1555 2.02 LINK SG CYS C 93 ZN ZN C1372 1555 1555 2.30 LINK SG CYS C 96 ZN ZN C1372 1555 1555 2.43 LINK SG CYS C 99 ZN ZN C1372 1555 1555 2.36 LINK SG CYS C 107 ZN ZN C1372 1555 1555 2.42 LINK ZN ZN C1371 O HOH C2411 1555 1555 1.97 LINK SG CYS D 39 ZN ZN D1372 1555 1555 2.22 LINK NE2 HIS D 66 ZN ZN D1372 1555 1555 2.02 LINK OE2 GLU D 67 ZN ZN D1372 1555 1555 1.95 LINK SG CYS D 93 ZN ZN D1373 1555 1555 2.29 LINK SG CYS D 96 ZN ZN D1373 1555 1555 2.43 LINK SG CYS D 99 ZN ZN D1373 1555 1555 2.33 LINK SG CYS D 107 ZN ZN D1373 1555 1555 2.42 LINK ZN ZN D1372 O HOH D2392 1555 1555 2.02 CISPEP 1 PRO A 8 PRO A 9 0 1.93 CISPEP 2 PRO B 8 PRO B 9 0 5.38 CISPEP 3 PRO C 8 PRO C 9 0 5.40 CISPEP 4 PRO D 8 PRO D 9 0 1.56 CRYST1 68.644 91.032 138.725 90.00 89.98 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014568 0.000000 -0.000005 0.00000 SCALE2 0.000000 0.010985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007209 0.00000