data_2CEH # _entry.id 2CEH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CEH pdb_00002ceh 10.2210/pdb2ceh/pdb PDBE EBI-27532 ? ? WWPDB D_1290027532 ? ? BMRB 6991 ? 10.13018/BMR6991 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-13 2 'Structure model' 1 1 2012-11-28 3 'Structure model' 2 0 2019-10-02 4 'Structure model' 2 1 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' 'Atomic model' 8 3 'Structure model' 'Data collection' 9 3 'Structure model' Other 10 4 'Structure model' 'Data collection' 11 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.Cartn_x' 2 3 'Structure model' '_atom_site.Cartn_y' 3 3 'Structure model' '_atom_site.Cartn_z' 4 3 'Structure model' '_atom_site.auth_atom_id' 5 3 'Structure model' '_atom_site.label_atom_id' 6 3 'Structure model' '_pdbx_database_status.status_code_cs' 7 3 'Structure model' '_pdbx_nmr_software.name' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CEH _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-02-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1AHW unspecified 'A COMPLEX OF EXTRACELLULAR DOMAIN OF TISSUE FACTOR WITH AN INHIBITORY FAB (5G9)' PDB 1BOY unspecified 'EXTRACELLULAR REGION OF HUMAN TISSUE FACTOR' PDB 1DAN unspecified 'COMPLEX OF ACTIVE SITE INHIBITED HUMAN BLOOD COAGULATION FACTOR VIIA WITH HUMAN RECOMBINANT SOLUBLE TISSUE FACTOR' PDB 1FAK unspecified 'HUMAN TISSUE FACTOR COMPLEXED WITH COAGULATION FACTOR VIIA INHIBITED WITH A BPTI-MUTANT' PDB 1J9C unspecified 'CRYSTAL STRUCTURE OF TISSUE FACTOR-FACTOR VIIA COMPLEX' PDB 1JPS unspecified 'CRYSTAL STRUCTURE OF TISSUE FACTOR IN COMPLEX WITHHUMANIZED FAB D3H44' PDB 1NL8 unspecified 'THEORETICAL MODEL OF THE TISSUE FACTOR/ FACTOR VIIA/FACTORXA COMPLEX' PDB 1O5D unspecified 'DISSECTING AND DESIGNING INHIBITOR SELECTIVITY DETERMINANTSAT THE S1 SITE USING AN ARTIFICIAL ALA190 PROTEASE (ALA190UPA)' PDB 1TFH unspecified 'EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR' PDB 1UJ3 unspecified 'CRYSTAL STRUCTURE OF A HUMANIZED FAB FRAGMENT OF ANTI-TISSUE-FACTOR ANTIBODY IN COMPLEX WITH TISSUE FACTOR' PDB 1W0Y unspecified 'TF7A_3771 COMPLEX' PDB 1W2K unspecified 'TF7A_4380 COMPLEX' PDB 1WQV unspecified 'HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITHPROPYLSULFONAMIDE-D-THR-MET-P- AMINOBENZAMIDINE' PDB 1WSS unspecified 'HUMAN FACTOR VIIA-TISSUE FACTOR IN COMPLEX WITH PEPRIDMIMETIC INHIBITOR THAT HAS TWO CHARGE GROUPS IN P2 AND P4' PDB 1WTG unspecified 'HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITHETHYLSULFONAMIDE-D-BIPHENYLALANINE-GLN-P- AMINOBENZAMIDINE' PDB 1WUN unspecified 'HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITHETHYLSULFONAMIDE-D-TRP-GLN-P- AMINOBENZAMIDINE' PDB 1WV7 unspecified 'HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITHETHYLSULFONAMIDE-D-5-PROPOXY-TRP-GLN-P- AMINOBENZAMIDINE' PDB 1Z6J unspecified 'CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF FACTORVIIA/TISSUE FACTOR/PYRAZINONE INHIBITOR' PDB 2C4F unspecified 'CRYSTAL STRUCTURE OF FACTOR VII.STF COMPLEXED WITH PD0297121' PDB 2CEF unspecified 'PHOSPHORYLATION OF THE CYTOPLASMIC TAIL OF TISSUE FACTOR AND ITS ROLE IN MODULATING STRUCTURE AND BINDING AFFINITY' PDB 2HFT unspecified 'THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION' BMRB 6991 unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sen, M.' 1 'Agrawal, S.' 2 'Craft, J.W.' 3 'Ruf, W.' 4 'Legge, G.B.' 5 # _citation.id primary _citation.title 'Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region.' _citation.journal_abbrev 'Open Spectrosc.J.' _citation.journal_volume 3 _citation.page_first 58 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN 1874-3838 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20076769 _citation.pdbx_database_id_DOI 10.2174/1874383800903010058 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sen, M.' 1 ? primary 'Herzik, M.' 2 ? primary 'Craft, J.W.' 3 ? primary 'Creath, A.L.' 4 ? primary 'Agrawal, S.' 5 ? primary 'Ruf, W.' 6 ? primary 'Legge, G.B.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'TISSUE FACTOR' _entity.formula_weight 2063.318 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'TISSUE FACTOR CYTOPLASMIC DOMAIN, RESIDUES 277-295' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TFCD, TF, COAGULATION FACTOR III, THROMBOPLASTIN, CD142 ANTIGEN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code CRKAGVGQSWKENSPLNVS _entity_poly.pdbx_seq_one_letter_code_can CRKAGVGQSWKENSPLNVS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 ARG n 1 3 LYS n 1 4 ALA n 1 5 GLY n 1 6 VAL n 1 7 GLY n 1 8 GLN n 1 9 SER n 1 10 TRP n 1 11 LYS n 1 12 GLU n 1 13 ASN n 1 14 SER n 1 15 PRO n 1 16 LEU n 1 17 ASN n 1 18 VAL n 1 19 SER n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 1 1 CYS CYS A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 SER 19 19 19 SER SER A . n # _cell.entry_id 2CEH _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CEH _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 2CEH _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 2CEH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2CEH _struct.title 'Phosphorylation of the Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CEH _struct_keywords.pdbx_keywords 'BLOOD CLOTTING' _struct_keywords.text ;UNPHOSPHORYLATED, PIN1, WW DOMAIN, BLOOD COAGULATION, GLYCOPROTEIN, LIPOPROTEIN, PALMITATE, POLYMORPHISM, TRANSMEMBRANE, COAGULATION PROTEIN, BLOOD CLOTTING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TF_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P13726 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CEH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 19 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13726 _struct_ref_seq.db_align_beg 277 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 295 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 2 ? ? 67.06 150.50 2 1 LYS A 3 ? ? 67.00 174.63 3 1 VAL A 6 ? ? -151.23 -38.89 4 1 GLN A 8 ? ? -138.89 -46.27 5 1 SER A 9 ? ? -65.41 14.20 6 1 LYS A 11 ? ? -161.85 -47.75 7 1 GLU A 12 ? ? 50.01 103.73 8 1 ASN A 13 ? ? -171.20 9.48 9 1 LEU A 16 ? ? 50.69 16.48 10 1 ASN A 17 ? ? 75.10 32.67 11 2 ALA A 4 ? ? -165.89 -57.65 12 2 VAL A 6 ? ? -164.06 -50.39 13 2 SER A 9 ? ? 78.11 67.73 14 2 TRP A 10 ? ? -152.35 -71.44 15 2 LYS A 11 ? ? -150.85 21.34 16 2 SER A 14 ? ? 106.98 148.62 17 2 LEU A 16 ? ? 53.97 14.36 18 3 ARG A 2 ? ? 69.43 77.05 19 3 LYS A 3 ? ? 75.27 -36.50 20 3 VAL A 6 ? ? -165.42 -46.01 21 3 SER A 9 ? ? 154.76 67.25 22 3 TRP A 10 ? ? -156.34 -61.47 23 3 LYS A 11 ? ? -166.42 -37.41 24 3 GLU A 12 ? ? 75.22 123.88 25 3 SER A 14 ? ? 62.26 163.59 26 3 LEU A 16 ? ? 51.39 15.82 27 3 ASN A 17 ? ? 75.13 31.02 28 4 LYS A 3 ? ? 47.66 -110.27 29 4 VAL A 6 ? ? -167.41 -42.15 30 4 GLN A 8 ? ? -137.98 -72.63 31 4 SER A 9 ? ? 67.05 78.92 32 4 TRP A 10 ? ? -154.27 -61.91 33 4 LYS A 11 ? ? -160.68 -41.46 34 4 GLU A 12 ? ? 72.08 129.32 35 4 LEU A 16 ? ? 53.56 14.32 36 4 ASN A 17 ? ? 72.34 34.15 37 5 LYS A 3 ? ? 76.82 134.41 38 5 ALA A 4 ? ? 52.19 -127.22 39 5 GLN A 8 ? ? 70.57 164.69 40 5 SER A 9 ? ? 84.16 -18.72 41 5 LYS A 11 ? ? -168.25 -43.92 42 5 GLU A 12 ? ? 77.72 128.56 43 5 LEU A 16 ? ? 50.53 16.05 44 6 LYS A 3 ? ? 71.58 -58.71 45 6 VAL A 6 ? ? -167.38 -70.29 46 6 SER A 9 ? ? 76.67 -7.52 47 6 LYS A 11 ? ? -164.18 -39.71 48 6 GLU A 12 ? ? 62.18 -163.88 49 6 LEU A 16 ? ? 52.43 16.29 50 7 GLN A 8 ? ? 70.46 171.89 51 7 SER A 9 ? ? 76.06 -12.75 52 7 LYS A 11 ? ? -164.60 -41.30 53 7 GLU A 12 ? ? 74.47 127.02 54 7 LEU A 16 ? ? 52.99 16.25 55 7 ASN A 17 ? ? 74.03 36.74 56 8 ARG A 2 ? ? 51.22 73.61 57 8 ALA A 4 ? ? -153.34 -37.86 58 8 VAL A 6 ? ? -137.10 -109.71 59 8 GLN A 8 ? ? 71.41 158.76 60 8 SER A 9 ? ? 73.32 68.06 61 8 TRP A 10 ? ? -153.22 -53.19 62 8 LYS A 11 ? ? -154.39 -39.59 63 8 GLU A 12 ? ? 33.69 100.68 64 8 ASN A 13 ? ? -142.42 -59.45 65 8 LEU A 16 ? ? 50.73 16.55 66 8 ASN A 17 ? ? 71.64 37.62 67 9 ARG A 2 ? ? 72.89 92.67 68 9 LYS A 3 ? ? -90.64 -62.56 69 9 GLN A 8 ? ? 78.09 151.07 70 9 SER A 9 ? ? 74.87 61.03 71 9 TRP A 10 ? ? -142.41 -52.40 72 9 LYS A 11 ? ? -149.78 -48.58 73 9 GLU A 12 ? ? 68.26 144.20 74 9 LEU A 16 ? ? 52.02 16.61 75 9 ASN A 17 ? ? 72.90 35.71 76 10 LYS A 3 ? ? -161.81 76.98 77 10 GLN A 8 ? ? 78.58 171.95 78 10 SER A 9 ? ? 74.43 77.44 79 10 TRP A 10 ? ? -161.19 -56.52 80 10 LYS A 11 ? ? -155.41 -27.81 81 10 GLU A 12 ? ? 21.83 104.93 82 10 ASN A 13 ? ? -148.18 -55.86 83 10 SER A 14 ? ? 74.35 155.81 84 10 LEU A 16 ? ? 52.94 15.20 # _pdbx_entry_details.entry_id 2CEH _pdbx_entry_details.compound_details ;INITIATES BLOOD COAGULATION BY FORMING A COMPLEX WITH CIRCULATING FACTOR VII OR VIIA ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'CYTOPLASMIC DOMAIN OF TISSUE FACTOR' _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_ensemble.entry_id 2CEH _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST POTENTIAL ENERGY ENSEMBLES' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '90% WATER 10% D2O' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 285.0 atm 1.0 6.0 0 ? pH K 2 285.0 atm 1.0 6.0 0 ? pH K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 ROESY 1 2 2 NOESY 1 3 3 TOCSY 1 4 4 IP-COSY 1 # _pdbx_nmr_details.entry_id 2CEH _pdbx_nmr_details.text 'THE UNPHOSPHORYLATED TFCD PEPTIDE NMR STRUCTURES WERE CALCULATED USING 2D HOMONUCLEAR NMR SPECTROSCOPY METHODS.' # _pdbx_nmr_refine.entry_id 2CEH _pdbx_nmr_refine.method 'DYANA AMBER 8.0.' _pdbx_nmr_refine.details ;INITIAL NMR STRUCTURES WERE CALCULATED BY DYANA, WHICH INCLUDES MODIFIED SEP RESIDUE, PHOSPHORYLATED SER, CRAFT AND LEGGE, 2005, J.BIOL MOL.NMR. TOP10 ANNEALLED STRUCTURES THEN FURTHER MINIMIZED VIA AMBER 8.0. ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement 'DYANA AMBER' 8.0 PONDER,J.W. 1 'structure solution' NMRPipe ? ? 2 'structure solution' NMRView ? ? 3 'structure solution' DYANA ? ? 4 'structure solution' Amber 8.0 ? 5 'structure solution' MOLMOL ? ? 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 GLN N N N N 72 GLN CA C N S 73 GLN C C N N 74 GLN O O N N 75 GLN CB C N N 76 GLN CG C N N 77 GLN CD C N N 78 GLN OE1 O N N 79 GLN NE2 N N N 80 GLN OXT O N N 81 GLN H H N N 82 GLN H2 H N N 83 GLN HA H N N 84 GLN HB2 H N N 85 GLN HB3 H N N 86 GLN HG2 H N N 87 GLN HG3 H N N 88 GLN HE21 H N N 89 GLN HE22 H N N 90 GLN HXT H N N 91 GLU N N N N 92 GLU CA C N S 93 GLU C C N N 94 GLU O O N N 95 GLU CB C N N 96 GLU CG C N N 97 GLU CD C N N 98 GLU OE1 O N N 99 GLU OE2 O N N 100 GLU OXT O N N 101 GLU H H N N 102 GLU H2 H N N 103 GLU HA H N N 104 GLU HB2 H N N 105 GLU HB3 H N N 106 GLU HG2 H N N 107 GLU HG3 H N N 108 GLU HE2 H N N 109 GLU HXT H N N 110 GLY N N N N 111 GLY CA C N N 112 GLY C C N N 113 GLY O O N N 114 GLY OXT O N N 115 GLY H H N N 116 GLY H2 H N N 117 GLY HA2 H N N 118 GLY HA3 H N N 119 GLY HXT H N N 120 LEU N N N N 121 LEU CA C N S 122 LEU C C N N 123 LEU O O N N 124 LEU CB C N N 125 LEU CG C N N 126 LEU CD1 C N N 127 LEU CD2 C N N 128 LEU OXT O N N 129 LEU H H N N 130 LEU H2 H N N 131 LEU HA H N N 132 LEU HB2 H N N 133 LEU HB3 H N N 134 LEU HG H N N 135 LEU HD11 H N N 136 LEU HD12 H N N 137 LEU HD13 H N N 138 LEU HD21 H N N 139 LEU HD22 H N N 140 LEU HD23 H N N 141 LEU HXT H N N 142 LYS N N N N 143 LYS CA C N S 144 LYS C C N N 145 LYS O O N N 146 LYS CB C N N 147 LYS CG C N N 148 LYS CD C N N 149 LYS CE C N N 150 LYS NZ N N N 151 LYS OXT O N N 152 LYS H H N N 153 LYS H2 H N N 154 LYS HA H N N 155 LYS HB2 H N N 156 LYS HB3 H N N 157 LYS HG2 H N N 158 LYS HG3 H N N 159 LYS HD2 H N N 160 LYS HD3 H N N 161 LYS HE2 H N N 162 LYS HE3 H N N 163 LYS HZ1 H N N 164 LYS HZ2 H N N 165 LYS HZ3 H N N 166 LYS HXT H N N 167 PRO N N N N 168 PRO CA C N S 169 PRO C C N N 170 PRO O O N N 171 PRO CB C N N 172 PRO CG C N N 173 PRO CD C N N 174 PRO OXT O N N 175 PRO H H N N 176 PRO HA H N N 177 PRO HB2 H N N 178 PRO HB3 H N N 179 PRO HG2 H N N 180 PRO HG3 H N N 181 PRO HD2 H N N 182 PRO HD3 H N N 183 PRO HXT H N N 184 SER N N N N 185 SER CA C N S 186 SER C C N N 187 SER O O N N 188 SER CB C N N 189 SER OG O N N 190 SER OXT O N N 191 SER H H N N 192 SER H2 H N N 193 SER HA H N N 194 SER HB2 H N N 195 SER HB3 H N N 196 SER HG H N N 197 SER HXT H N N 198 TRP N N N N 199 TRP CA C N S 200 TRP C C N N 201 TRP O O N N 202 TRP CB C N N 203 TRP CG C Y N 204 TRP CD1 C Y N 205 TRP CD2 C Y N 206 TRP NE1 N Y N 207 TRP CE2 C Y N 208 TRP CE3 C Y N 209 TRP CZ2 C Y N 210 TRP CZ3 C Y N 211 TRP CH2 C Y N 212 TRP OXT O N N 213 TRP H H N N 214 TRP H2 H N N 215 TRP HA H N N 216 TRP HB2 H N N 217 TRP HB3 H N N 218 TRP HD1 H N N 219 TRP HE1 H N N 220 TRP HE3 H N N 221 TRP HZ2 H N N 222 TRP HZ3 H N N 223 TRP HH2 H N N 224 TRP HXT H N N 225 VAL N N N N 226 VAL CA C N S 227 VAL C C N N 228 VAL O O N N 229 VAL CB C N N 230 VAL CG1 C N N 231 VAL CG2 C N N 232 VAL OXT O N N 233 VAL H H N N 234 VAL H2 H N N 235 VAL HA H N N 236 VAL HB H N N 237 VAL HG11 H N N 238 VAL HG12 H N N 239 VAL HG13 H N N 240 VAL HG21 H N N 241 VAL HG22 H N N 242 VAL HG23 H N N 243 VAL HXT H N N 244 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 GLN N CA sing N N 68 GLN N H sing N N 69 GLN N H2 sing N N 70 GLN CA C sing N N 71 GLN CA CB sing N N 72 GLN CA HA sing N N 73 GLN C O doub N N 74 GLN C OXT sing N N 75 GLN CB CG sing N N 76 GLN CB HB2 sing N N 77 GLN CB HB3 sing N N 78 GLN CG CD sing N N 79 GLN CG HG2 sing N N 80 GLN CG HG3 sing N N 81 GLN CD OE1 doub N N 82 GLN CD NE2 sing N N 83 GLN NE2 HE21 sing N N 84 GLN NE2 HE22 sing N N 85 GLN OXT HXT sing N N 86 GLU N CA sing N N 87 GLU N H sing N N 88 GLU N H2 sing N N 89 GLU CA C sing N N 90 GLU CA CB sing N N 91 GLU CA HA sing N N 92 GLU C O doub N N 93 GLU C OXT sing N N 94 GLU CB CG sing N N 95 GLU CB HB2 sing N N 96 GLU CB HB3 sing N N 97 GLU CG CD sing N N 98 GLU CG HG2 sing N N 99 GLU CG HG3 sing N N 100 GLU CD OE1 doub N N 101 GLU CD OE2 sing N N 102 GLU OE2 HE2 sing N N 103 GLU OXT HXT sing N N 104 GLY N CA sing N N 105 GLY N H sing N N 106 GLY N H2 sing N N 107 GLY CA C sing N N 108 GLY CA HA2 sing N N 109 GLY CA HA3 sing N N 110 GLY C O doub N N 111 GLY C OXT sing N N 112 GLY OXT HXT sing N N 113 LEU N CA sing N N 114 LEU N H sing N N 115 LEU N H2 sing N N 116 LEU CA C sing N N 117 LEU CA CB sing N N 118 LEU CA HA sing N N 119 LEU C O doub N N 120 LEU C OXT sing N N 121 LEU CB CG sing N N 122 LEU CB HB2 sing N N 123 LEU CB HB3 sing N N 124 LEU CG CD1 sing N N 125 LEU CG CD2 sing N N 126 LEU CG HG sing N N 127 LEU CD1 HD11 sing N N 128 LEU CD1 HD12 sing N N 129 LEU CD1 HD13 sing N N 130 LEU CD2 HD21 sing N N 131 LEU CD2 HD22 sing N N 132 LEU CD2 HD23 sing N N 133 LEU OXT HXT sing N N 134 LYS N CA sing N N 135 LYS N H sing N N 136 LYS N H2 sing N N 137 LYS CA C sing N N 138 LYS CA CB sing N N 139 LYS CA HA sing N N 140 LYS C O doub N N 141 LYS C OXT sing N N 142 LYS CB CG sing N N 143 LYS CB HB2 sing N N 144 LYS CB HB3 sing N N 145 LYS CG CD sing N N 146 LYS CG HG2 sing N N 147 LYS CG HG3 sing N N 148 LYS CD CE sing N N 149 LYS CD HD2 sing N N 150 LYS CD HD3 sing N N 151 LYS CE NZ sing N N 152 LYS CE HE2 sing N N 153 LYS CE HE3 sing N N 154 LYS NZ HZ1 sing N N 155 LYS NZ HZ2 sing N N 156 LYS NZ HZ3 sing N N 157 LYS OXT HXT sing N N 158 PRO N CA sing N N 159 PRO N CD sing N N 160 PRO N H sing N N 161 PRO CA C sing N N 162 PRO CA CB sing N N 163 PRO CA HA sing N N 164 PRO C O doub N N 165 PRO C OXT sing N N 166 PRO CB CG sing N N 167 PRO CB HB2 sing N N 168 PRO CB HB3 sing N N 169 PRO CG CD sing N N 170 PRO CG HG2 sing N N 171 PRO CG HG3 sing N N 172 PRO CD HD2 sing N N 173 PRO CD HD3 sing N N 174 PRO OXT HXT sing N N 175 SER N CA sing N N 176 SER N H sing N N 177 SER N H2 sing N N 178 SER CA C sing N N 179 SER CA CB sing N N 180 SER CA HA sing N N 181 SER C O doub N N 182 SER C OXT sing N N 183 SER CB OG sing N N 184 SER CB HB2 sing N N 185 SER CB HB3 sing N N 186 SER OG HG sing N N 187 SER OXT HXT sing N N 188 TRP N CA sing N N 189 TRP N H sing N N 190 TRP N H2 sing N N 191 TRP CA C sing N N 192 TRP CA CB sing N N 193 TRP CA HA sing N N 194 TRP C O doub N N 195 TRP C OXT sing N N 196 TRP CB CG sing N N 197 TRP CB HB2 sing N N 198 TRP CB HB3 sing N N 199 TRP CG CD1 doub Y N 200 TRP CG CD2 sing Y N 201 TRP CD1 NE1 sing Y N 202 TRP CD1 HD1 sing N N 203 TRP CD2 CE2 doub Y N 204 TRP CD2 CE3 sing Y N 205 TRP NE1 CE2 sing Y N 206 TRP NE1 HE1 sing N N 207 TRP CE2 CZ2 sing Y N 208 TRP CE3 CZ3 doub Y N 209 TRP CE3 HE3 sing N N 210 TRP CZ2 CH2 doub Y N 211 TRP CZ2 HZ2 sing N N 212 TRP CZ3 CH2 sing Y N 213 TRP CZ3 HZ3 sing N N 214 TRP CH2 HH2 sing N N 215 TRP OXT HXT sing N N 216 VAL N CA sing N N 217 VAL N H sing N N 218 VAL N H2 sing N N 219 VAL CA C sing N N 220 VAL CA CB sing N N 221 VAL CA HA sing N N 222 VAL C O doub N N 223 VAL C OXT sing N N 224 VAL CB CG1 sing N N 225 VAL CB CG2 sing N N 226 VAL CB HB sing N N 227 VAL CG1 HG11 sing N N 228 VAL CG1 HG12 sing N N 229 VAL CG1 HG13 sing N N 230 VAL CG2 HG21 sing N N 231 VAL CG2 HG22 sing N N 232 VAL CG2 HG23 sing N N 233 VAL OXT HXT sing N N 234 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 OTHER Bruker 800 2 OTHER Bruker 600 # _atom_sites.entry_id 2CEH _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_