HEADER TRANSFERASE 15-MAY-06 2CMW TITLE STRUCTURE OF HUMAN CASEIN KINASE 1 GAMMA-1 IN COMPLEX WITH 2-(2- TITLE 2 HYDROXYETHYLAMINO)-6-(3-CHLOROANILINO)-9-ISOPROPYLPURINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE I ISOFORM GAMMA-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 45-352; COMPND 5 SYNONYM: CKI-GAMMA 1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS WNT SIGNALING PATHWAY, SERINE/THREONINE-PROTEIN KINASE, KINASE, KEYWDS 2 TRANSFERASE, ATP-BINDING, PHOSPHORYLATION, NUCLEOTIDE-BINDING, KEYWDS 3 SERINE/THREONINE PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR G.BUNKOCZI,P.RELLOS,S.DAS,P.SAVITSKY,F.NIESEN,F.SOBOTT,O.FEDOROV, AUTHOR 2 A.C.W.PIKE,F.VON DELFT,M.SUNDSTROM,C.ARROWSMITH,A.EDWARDS,J.WEIGELT, AUTHOR 3 S.KNAPP REVDAT 5 13-DEC-23 2CMW 1 LINK REVDAT 4 24-JAN-18 2CMW 1 TITLE JRNL REVDAT 3 13-JUL-11 2CMW 1 VERSN REVDAT 2 24-FEB-09 2CMW 1 VERSN REVDAT 1 15-JUN-06 2CMW 0 JRNL AUTH G.BUNKOCZI,P.RELLOS,S.DAS,P.SAVITSKY,F.NIESEN,F.SOBOTT, JRNL AUTH 2 O.FEDOROV,A.C.W.PIKE,F.VON DELFT,M.SUNDSTROM,C.ARROWSMITH, JRNL AUTH 3 A.EDWARDS,J.WEIGELT,S.KNAPP JRNL TITL STRUCTURE OF HUMAN CASEIN KINASE 1 GAMMA-1 IN COMPLEX WITH JRNL TITL 2 2-(2-HYDROXYETHYLAMINO)-6-(3-CHLOROANILINO) JRNL TITL 3 -9-ISOPROPYLPURINE (CASP TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 36288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1914 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2585 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2385 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 81 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 23.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.36000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -1.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.147 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2554 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1774 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3440 ; 1.314 ; 2.011 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4230 ; 0.973 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 5.910 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;35.245 ;22.991 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 429 ;13.651 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.037 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 352 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2780 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 540 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 515 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1844 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1259 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1266 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 223 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.103 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.217 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1505 ; 2.893 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2353 ; 4.225 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1244 ; 6.045 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1087 ; 7.834 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 122 REMARK 3 RESIDUE RANGE : A 332 A 339 REMARK 3 ORIGIN FOR THE GROUP (A): 22.6346 41.7447 8.2931 REMARK 3 T TENSOR REMARK 3 T11: -0.2013 T22: -0.0432 REMARK 3 T33: -0.1153 T12: -0.0050 REMARK 3 T13: -0.0003 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.4260 L22: 1.5278 REMARK 3 L33: 1.8499 L12: 0.4472 REMARK 3 L13: -0.2922 L23: -0.2716 REMARK 3 S TENSOR REMARK 3 S11: 0.1064 S12: -0.1842 S13: 0.0162 REMARK 3 S21: 0.1442 S22: -0.0644 S23: 0.0445 REMARK 3 S31: 0.0623 S32: 0.0310 S33: -0.0420 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 331 REMARK 3 ORIGIN FOR THE GROUP (A): 34.8623 59.2176 20.3121 REMARK 3 T TENSOR REMARK 3 T11: -0.0551 T22: -0.1408 REMARK 3 T33: -0.0904 T12: -0.0125 REMARK 3 T13: -0.0562 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 0.9214 L22: 2.4575 REMARK 3 L33: 2.6664 L12: 0.0495 REMARK 3 L13: -0.7673 L23: 0.1718 REMARK 3 S TENSOR REMARK 3 S11: 0.0813 S12: -0.0751 S13: 0.0793 REMARK 3 S21: 0.5561 S22: 0.0193 S23: -0.3579 REMARK 3 S31: -0.2408 S32: 0.1893 S33: -0.1006 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. DIETHYLAMINO TAIL OF LIGAND IS DISORDERED AND HAS NOT REMARK 3 BEEN INCLUDED IN THE FINAL MODEL REMARK 4 REMARK 4 2CMW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1290028753. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9765 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38266 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.830 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.72 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2CHL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 5.5, 0.05M AMMONIUM REMARK 280 ACETATE, 12% PEG 10K, PH 5.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.10950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.61450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.58300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.61450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.10950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.58300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CASEIN KINASES ARE OPERATIONALLY DEFINED BY THEIR REMARK 400 PREFERENTIAL UTILIZATION OF ACIDIC PROTEINS SUCH AS CASEINS AS REMARK 400 SUBSTRATES. IT CAN PHOSPHORYLATE A LARGE NUMBER OF PROTEINS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 43 REMARK 465 THR A 212 REMARK 465 VAL A 340 REMARK 465 HIS A 341 REMARK 465 VAL A 342 REMARK 465 ASP A 343 REMARK 465 SER A 344 REMARK 465 GLY A 345 REMARK 465 ALA A 346 REMARK 465 SER A 347 REMARK 465 ALA A 348 REMARK 465 ILE A 349 REMARK 465 THR A 350 REMARK 465 ARG A 351 REMARK 465 GLU A 352 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 78 CE NZ REMARK 470 ARG A 89 NE CZ NH1 NH2 REMARK 470 LYS A 178 CD CE NZ REMARK 470 GLU A 198 CG CD OE1 OE2 REMARK 470 LYS A 200 CE NZ REMARK 470 LYS A 201 CE NZ REMARK 470 LYS A 209 CE NZ REMARK 470 SER A 210 OG REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 ASP A 257 CG OD1 OD2 REMARK 470 THR A 258 OG1 CG2 REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 GLU A 261 CG CD OE1 OE2 REMARK 470 ARG A 262 CZ NH1 NH2 REMARK 470 LYS A 265 CE NZ REMARK 470 ARG A 271 CZ NH1 NH2 REMARK 470 GLU A 276 CD OE1 OE2 REMARK 470 GLU A 280 CD OE1 OE2 REMARK 470 LYS A 317 NZ REMARK 470 SER A 339 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2072 O HOH A 2233 3645 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 52 CB CYS A 52 SG -0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 164 42.82 -141.89 REMARK 500 ASN A 177 16.85 -69.91 REMARK 500 LYS A 178 6.23 59.89 REMARK 500 ASP A 187 82.76 61.96 REMARK 500 LYS A 200 17.36 58.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SCS A 110 12.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2047 DISTANCE = 6.67 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1343 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A1344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLP A1340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLP A1341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLP A1342 REMARK 999 REMARK 999 SEQUENCE REMARK 999 NTERMINAL SER-MET ARE DERIVED FROM CLONING DBREF 2CMW A 43 44 PDB 2CMW 2CMW 43 44 DBREF 2CMW A 45 352 UNP Q9HCP0 KC1G1_HUMAN 45 352 SEQRES 1 A 310 SER MET ARG VAL GLY LYS LYS ILE GLY CYS GLY ASN PHE SEQRES 2 A 310 GLY GLU LEU ARG LEU GLY LYS ASN LEU TYR THR ASN GLU SEQRES 3 A 310 TYR VAL ALA ILE LYS LEU GLU PRO ILE LYS SER ARG ALA SEQRES 4 A 310 PRO GLN LEU HIS LEU GLU TYR ARG PHE TYR LYS GLN LEU SEQRES 5 A 310 GLY SER ALA GLY GLU GLY LEU PRO GLN VAL TYR TYR PHE SEQRES 6 A 310 GLY PRO SCS GLY LYS TYR ASN ALA MET VAL LEU GLU LEU SEQRES 7 A 310 LEU GLY PRO SER LEU GLU ASP LEU PHE ASP LEU CYS ASP SEQRES 8 A 310 ARG THR PHE THR LEU LYS THR VAL LEU MET ILE ALA ILE SEQRES 9 A 310 GLN LEU LEU SER ARG MET GLU TYR VAL HIS SER LYS ASN SEQRES 10 A 310 LEU ILE TYR ARG ASP VAL LYS PRO GLU ASN PHE LEU ILE SEQRES 11 A 310 GLY ARG GLN GLY ASN LYS LYS GLU HIS VAL ILE HIS ILE SEQRES 12 A 310 ILE ASP PHE GLY LEU ALA LYS GLU TYR ILE ASP PRO GLU SEQRES 13 A 310 THR LYS LYS HIS ILE PRO TYR ARG GLU HIS LYS SER LEU SEQRES 14 A 310 THR GLY THR ALA ARG TYR MET SER ILE ASN THR HIS LEU SEQRES 15 A 310 GLY LYS GLU GLN SER ARG ARG ASP ASP LEU GLU ALA LEU SEQRES 16 A 310 GLY HIS MET PHE MET TYR PHE LEU ARG GLY SER LEU PRO SEQRES 17 A 310 TRP GLN GLY LEU LYS ALA ASP THR LEU LYS GLU ARG TYR SEQRES 18 A 310 GLN LYS ILE GLY ASP THR LYS ARG ASN THR PRO ILE GLU SEQRES 19 A 310 ALA LEU CYS GLU ASN PHE PRO GLU GLU MET ALA THR TYR SEQRES 20 A 310 LEU ARG TYR VAL ARG ARG LEU ASP PHE PHE GLU LYS PRO SEQRES 21 A 310 ASP TYR GLU TYR LEU ARG THR LEU PHE THR ASP LEU PHE SEQRES 22 A 310 GLU LYS LYS GLY TYR THR PHE ASP TYR ALA TYR ASP TRP SEQRES 23 A 310 VAL GLY ARG PRO ILE PRO THR PRO VAL GLY SER VAL HIS SEQRES 24 A 310 VAL ASP SER GLY ALA SER ALA ILE THR ARG GLU MODRES 2CMW SCS A 110 CYS 3-(ETHYLDISULFANYL)-L-ALANINE HET SCS A 110 13 HET OLP A1340 27 HET OLP A1341 24 HET OLP A1342 24 HET PO4 A1343 5 HET ACT A1344 4 HETNAM SCS 3-(ETHYLDISULFANYL)-L-ALANINE HETNAM OLP 2-(2-HYDROXYETHYLAMINO)-6-(3-CHLOROANILINO)-9- HETNAM 2 OLP ISOPROPYLPURINE HETNAM PO4 PHOSPHATE ION HETNAM ACT ACETATE ION FORMUL 1 SCS C5 H11 N O2 S2 FORMUL 2 OLP 3(C16 H19 CL N6 O) FORMUL 5 PO4 O4 P 3- FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 HOH *293(H2 O) HELIX 1 1 GLN A 83 GLY A 95 1 13 HELIX 2 2 SER A 124 CYS A 132 1 9 HELIX 3 3 THR A 137 LYS A 158 1 22 HELIX 4 4 LYS A 166 GLU A 168 5 3 HELIX 5 5 SER A 219 LEU A 224 1 6 HELIX 6 6 SER A 229 GLY A 247 1 19 HELIX 7 7 THR A 258 THR A 273 1 16 HELIX 8 8 PRO A 274 CYS A 279 1 6 HELIX 9 9 PRO A 283 LEU A 296 1 14 HELIX 10 10 ASP A 303 LYS A 318 1 16 SHEET 1 AA 5 LYS A 49 CYS A 52 0 SHEET 2 AA 5 GLU A 57 LYS A 62 -1 O LEU A 58 N ILE A 50 SHEET 3 AA 5 TYR A 69 PRO A 76 -1 O VAL A 70 N GLY A 61 SHEET 4 AA 5 TYR A 113 GLU A 119 -1 O ASN A 114 N GLU A 75 SHEET 5 AA 5 VAL A 104 SCS A 110 -1 N TYR A 105 O VAL A 117 SHEET 1 AB 2 LEU A 160 ILE A 161 0 SHEET 2 AB 2 LYS A 192 GLU A 193 -1 O LYS A 192 N ILE A 161 SHEET 1 AC 2 PHE A 170 ILE A 172 0 SHEET 2 AC 2 ILE A 183 ILE A 185 -1 O HIS A 184 N LEU A 171 LINK C PRO A 109 N SCS A 110 1555 1555 1.33 LINK C SCS A 110 N GLY A 111 1555 1555 1.33 SITE 1 AC1 8 ARG A 216 GLN A 252 GLY A 253 HOH A2287 SITE 2 AC1 8 HOH A2288 HOH A2289 HOH A2291 HOH A2292 SITE 1 AC2 6 LYS A 48 ASN A 63 TYR A 105 OLP A1341 SITE 2 AC2 6 OLP A1342 HOH A2293 SITE 1 AC3 17 ILE A 50 GLY A 51 LEU A 58 LEU A 64 SITE 2 AC3 17 LEU A 118 GLU A 119 LEU A 121 GLY A 122 SITE 3 AC3 17 LEU A 171 ILE A 186 PRO A 334 PRO A 336 SITE 4 AC3 17 HOH A2113 HOH A2281 HOH A2282 HOH A2283 SITE 5 AC3 17 HOH A2284 SITE 1 AC4 12 LYS A 62 ASN A 63 LEU A 64 TYR A 65 SITE 2 AC4 12 ASP A 127 ASP A 130 ILE A 333 PRO A 334 SITE 3 AC4 12 THR A 335 OLP A1342 ACT A1344 HOH A2285 SITE 1 AC5 14 GLY A 47 GLY A 61 LYS A 62 ASN A 63 SITE 2 AC5 14 ILE A 72 TYR A 106 SCS A 110 ASP A 130 SITE 3 AC5 14 PRO A 332 OLP A1341 ACT A1344 HOH A2095 SITE 4 AC5 14 HOH A2273 HOH A2286 CRYST1 50.219 57.166 129.229 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019913 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007738 0.00000