HEADER ISOMERASE 17-JUL-05 2CZU TITLE LIPOCALIN-TYPE PROSTAGLANDIN D SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROSTAGLANDIN-H2 D-ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIPOCALIN-TYPE PROSTAGLANDIN-D SYNTHASE, GLUTATHIONE- COMPND 5 INDEPENDENT PGD SYNTHETASE, PROSTAGLANDIN-H2 D-ISOMERASE, PGD2 COMPND 6 SYNTHASE, PTGDS, PGDS; COMPND 7 EC: 5.3.99.2; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIPOCALIN, LPGDS_P212121 NATIVE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.KUMASAKA,D.IRIKURA,H.AGO,K.ARITAKE,M.YAMAMOTO,T.INOUE,M.MIYANO, AUTHOR 2 Y.URADE,O.HAYAISHI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI) REVDAT 8 09-OCT-24 2CZU 1 REMARK REVDAT 7 03-APR-24 2CZU 1 REMARK REVDAT 6 20-MAR-24 2CZU 1 SOURCE REVDAT 5 10-NOV-21 2CZU 1 SEQADV REVDAT 4 13-JUL-11 2CZU 1 VERSN REVDAT 3 12-JAN-10 2CZU 1 JRNL REVDAT 2 24-FEB-09 2CZU 1 VERSN REVDAT 1 03-OCT-06 2CZU 0 JRNL AUTH T.KUMASAKA,K.ARITAKE,H.AGO,D.IRIKURA,T.TSURUMURA,M.YAMAMOTO, JRNL AUTH 2 M.MIYANO,Y.URADE,O.HAYAISHI JRNL TITL STRUCTURAL BASIS OF THE CATALYTIC MECHANISM OPERATING IN JRNL TITL 2 OPEN-CLOSED CONFORMERS OF LIPOCALIN TYPE PROSTAGLANDIN D JRNL TITL 3 SYNTHASE. JRNL REF J.BIOL.CHEM. V. 284 22344 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19546224 JRNL DOI 10.1074/JBC.M109.018341 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.IRIKURA,T.KUMASAKA,M.YAMAMOTO,H.AGO,M.MIYANO,K.B.KUBATA, REMARK 1 AUTH 2 H.SAKAI,O.HAYAISHI,Y.URADE REMARK 1 TITL CLONING, EXPRESSION, CRYSTALLIZATION, AND PRELIMINARY X-RAY REMARK 1 TITL 2 ANALYSIS OF RECOMBINANT MOUSE LIPOCALIN-TYPE PROSTAGLANDIN D REMARK 1 TITL 3 SYNTHASE, A SOMNOGEN-PRODUCING ENZYME REMARK 1 REF J.BIOCHEM.(TOKYO) V. 133 29 2003 REMARK 1 REFN ISSN 0021-924X REMARK 1 PMID 12761195 REMARK 1 DOI 10.1093/JB/MVG006 REMARK 1 REFERENCE 2 REMARK 1 AUTH N.EGUCHI,T.MINAMI,N.SHIRAFUJI,Y.KANAOKA,T.TANAKA,A.NAGATA, REMARK 1 AUTH 2 N.YOSHIDA,Y.URADE,S.ITO,O.HAYAISHI REMARK 1 TITL LACK OF TACTILE PAIN (ALLODYNIA) IN LIPOCALIN-TYPE REMARK 1 TITL 2 PROSTAGLANDIN D SYNTHASE-DEFICIENT MICE REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 96 726 1999 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 9892701 REMARK 1 DOI 10.1073/PNAS.96.2.726 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 16972 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 922 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1279 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2425 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.35000 REMARK 3 B22 (A**2) : 4.68000 REMARK 3 B33 (A**2) : -3.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.326 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.238 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.174 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.441 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2480 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3348 ; 1.480 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 1.271 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 460 ;14.826 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 364 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1866 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1020 ; 0.271 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 243 ; 0.122 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 78 ; 0.252 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.179 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1530 ; 1.325 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2458 ; 2.355 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 950 ; 3.023 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 890 ; 4.709 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 189 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0170 14.4480 10.4190 REMARK 3 T TENSOR REMARK 3 T11: 0.1110 T22: 0.0071 REMARK 3 T33: 0.1943 T12: -0.0205 REMARK 3 T13: -0.0105 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 2.2373 L22: 0.2491 REMARK 3 L33: 2.5146 L12: 0.0703 REMARK 3 L13: -0.2846 L23: 0.0090 REMARK 3 S TENSOR REMARK 3 S11: 0.0822 S12: -0.1801 S13: -0.1120 REMARK 3 S21: 0.0557 S22: -0.0599 S23: -0.0034 REMARK 3 S31: 0.0924 S32: 0.0090 S33: -0.0223 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 189 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2420 14.1850 42.3280 REMARK 3 T TENSOR REMARK 3 T11: 0.1269 T22: 0.0033 REMARK 3 T33: 0.1687 T12: 0.0154 REMARK 3 T13: -0.0104 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.5662 L22: 0.3470 REMARK 3 L33: 3.5469 L12: 0.0612 REMARK 3 L13: 0.1641 L23: -0.2079 REMARK 3 S TENSOR REMARK 3 S11: 0.0654 S12: 0.0488 S13: -0.0405 REMARK 3 S21: -0.0664 S22: -0.0063 S23: -0.0018 REMARK 3 S31: 0.2522 S32: 0.0161 S33: -0.0591 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000024811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL45XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.010 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 56.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: C2221 MAD MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MALONATE, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.10000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.10000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 GLN A 25 REMARK 465 GLY A 26 REMARK 465 HIS A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 VAL A 30 REMARK 465 GLN A 31 REMARK 465 PRO A 32 REMARK 465 ASN A 33 REMARK 465 PHE A 34 REMARK 465 PRO A 110 REMARK 465 HIS A 111 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 GLN B 25 REMARK 465 GLY B 26 REMARK 465 HIS B 27 REMARK 465 ASP B 28 REMARK 465 THR B 29 REMARK 465 VAL B 30 REMARK 465 GLN B 31 REMARK 465 PRO B 32 REMARK 465 ASN B 33 REMARK 465 PHE B 34 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 52 175.65 -57.22 REMARK 500 LYS A 58 -7.65 -159.33 REMARK 500 ARG A 85 -63.65 -91.83 REMARK 500 TYR A 125 -17.38 -49.71 REMARK 500 GLU A 127 -50.04 -134.24 REMARK 500 THR A 136 107.41 -164.93 REMARK 500 PRO A 139 99.66 -55.25 REMARK 500 GLN A 141 41.16 -107.48 REMARK 500 ILE A 187 -14.05 -146.24 REMARK 500 GLN A 188 21.41 80.72 REMARK 500 SER B 52 174.30 -56.55 REMARK 500 LYS B 58 -8.27 -159.21 REMARK 500 ARG B 85 -62.41 -92.67 REMARK 500 SER B 109 79.60 -115.28 REMARK 500 HIS B 111 -82.18 -57.12 REMARK 500 GLU B 127 -49.77 -135.92 REMARK 500 THR B 136 105.60 -165.78 REMARK 500 PRO B 139 94.00 -57.55 REMARK 500 ILE B 187 -20.13 -145.95 REMARK 500 GLN B 188 53.30 75.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CZT RELATED DB: PDB REMARK 900 DIFFERENT SPACE GROUP CRYSTAL FORM DBREF 2CZU A 25 189 UNP O09114 PTGDS_MOUSE 25 189 DBREF 2CZU B 25 189 UNP O09114 PTGDS_MOUSE 25 189 SEQADV 2CZU GLY A 23 UNP O09114 CLONING ARTIFACT SEQADV 2CZU SER A 24 UNP O09114 CLONING ARTIFACT SEQADV 2CZU ALA A 65 UNP O09114 CYS 65 ENGINEERED MUTATION SEQADV 2CZU GLY B 23 UNP O09114 CLONING ARTIFACT SEQADV 2CZU SER B 24 UNP O09114 CLONING ARTIFACT SEQADV 2CZU ALA B 65 UNP O09114 CYS 65 ENGINEERED MUTATION SEQRES 1 A 167 GLY SER GLN GLY HIS ASP THR VAL GLN PRO ASN PHE GLN SEQRES 2 A 167 GLN ASP LYS PHE LEU GLY ARG TRP TYR SER ALA GLY LEU SEQRES 3 A 167 ALA SER ASN SER SER TRP PHE ARG GLU LYS LYS ALA VAL SEQRES 4 A 167 LEU TYR MET ALA LYS THR VAL VAL ALA PRO SER THR GLU SEQRES 5 A 167 GLY GLY LEU ASN LEU THR SER THR PHE LEU ARG LYS ASN SEQRES 6 A 167 GLN CYS GLU THR LYS ILE MET VAL LEU GLN PRO ALA GLY SEQRES 7 A 167 ALA PRO GLY HIS TYR THR TYR SER SER PRO HIS SER GLY SEQRES 8 A 167 SER ILE HIS SER VAL SER VAL VAL GLU ALA ASN TYR ASP SEQRES 9 A 167 GLU TYR ALA LEU LEU PHE SER ARG GLY THR LYS GLY PRO SEQRES 10 A 167 GLY GLN ASP PHE ARG MET ALA THR LEU TYR SER ARG THR SEQRES 11 A 167 GLN THR LEU LYS ASP GLU LEU LYS GLU LYS PHE THR THR SEQRES 12 A 167 PHE SER LYS ALA GLN GLY LEU THR GLU GLU ASP ILE VAL SEQRES 13 A 167 PHE LEU PRO GLN PRO ASP LYS CYS ILE GLN GLU SEQRES 1 B 167 GLY SER GLN GLY HIS ASP THR VAL GLN PRO ASN PHE GLN SEQRES 2 B 167 GLN ASP LYS PHE LEU GLY ARG TRP TYR SER ALA GLY LEU SEQRES 3 B 167 ALA SER ASN SER SER TRP PHE ARG GLU LYS LYS ALA VAL SEQRES 4 B 167 LEU TYR MET ALA LYS THR VAL VAL ALA PRO SER THR GLU SEQRES 5 B 167 GLY GLY LEU ASN LEU THR SER THR PHE LEU ARG LYS ASN SEQRES 6 B 167 GLN CYS GLU THR LYS ILE MET VAL LEU GLN PRO ALA GLY SEQRES 7 B 167 ALA PRO GLY HIS TYR THR TYR SER SER PRO HIS SER GLY SEQRES 8 B 167 SER ILE HIS SER VAL SER VAL VAL GLU ALA ASN TYR ASP SEQRES 9 B 167 GLU TYR ALA LEU LEU PHE SER ARG GLY THR LYS GLY PRO SEQRES 10 B 167 GLY GLN ASP PHE ARG MET ALA THR LEU TYR SER ARG THR SEQRES 11 B 167 GLN THR LEU LYS ASP GLU LEU LYS GLU LYS PHE THR THR SEQRES 12 B 167 PHE SER LYS ALA GLN GLY LEU THR GLU GLU ASP ILE VAL SEQRES 13 B 167 PHE LEU PRO GLN PRO ASP LYS CYS ILE GLN GLU FORMUL 3 HOH *106(H2 O) HELIX 1 1 GLN A 35 LEU A 40 5 6 HELIX 2 2 SER A 52 GLU A 57 1 6 HELIX 3 3 LYS A 58 LEU A 62 5 5 HELIX 4 4 LYS A 156 ALA A 169 1 14 HELIX 5 5 THR A 173 GLU A 175 5 3 HELIX 6 6 GLN B 35 LEU B 40 5 6 HELIX 7 7 SER B 52 GLU B 57 1 6 HELIX 8 8 LYS B 58 LEU B 62 5 5 HELIX 9 9 LYS B 156 ALA B 169 1 14 HELIX 10 10 THR B 173 GLU B 175 5 3 SHEET 1 A10 ILE A 177 PHE A 179 0 SHEET 2 A10 GLY A 41 SER A 50 -1 N LEU A 48 O VAL A 178 SHEET 3 A10 ASP A 142 SER A 150 -1 O LEU A 148 N ALA A 46 SHEET 4 A10 TYR A 128 THR A 136 -1 N LEU A 131 O THR A 147 SHEET 5 A10 ILE A 115 ASN A 124 -1 N GLU A 122 O LEU A 130 SHEET 6 A10 HIS A 104 SER A 108 -1 N TYR A 105 O VAL A 118 SHEET 7 A10 CYS A 89 PRO A 98 -1 N GLN A 97 O THR A 106 SHEET 8 A10 LEU A 77 LEU A 84 -1 N PHE A 83 O GLU A 90 SHEET 9 A10 ALA A 65 PRO A 71 -1 N ALA A 70 O ASN A 78 SHEET 10 A10 GLY A 41 SER A 50 -1 N GLY A 41 O VAL A 69 SHEET 1 B10 ILE B 177 PHE B 179 0 SHEET 2 B10 GLY B 41 SER B 50 -1 N LEU B 48 O VAL B 178 SHEET 3 B10 ASP B 142 SER B 150 -1 O LEU B 148 N GLY B 47 SHEET 4 B10 TYR B 128 THR B 136 -1 N LEU B 131 O THR B 147 SHEET 5 B10 SER B 114 ASN B 124 -1 N GLU B 122 O LEU B 130 SHEET 6 B10 HIS B 104 SER B 109 -1 N SER B 109 O SER B 114 SHEET 7 B10 CYS B 89 PRO B 98 -1 N GLN B 97 O THR B 106 SHEET 8 B10 LEU B 77 LEU B 84 -1 N PHE B 83 O GLU B 90 SHEET 9 B10 ALA B 65 PRO B 71 -1 N ALA B 70 O ASN B 78 SHEET 10 B10 GLY B 41 SER B 50 -1 N GLY B 41 O VAL B 69 SSBOND 1 CYS A 89 CYS A 186 1555 1555 2.03 SSBOND 2 CYS B 89 CYS B 186 1555 1555 2.03 CRYST1 46.200 66.800 105.300 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021640 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014962 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009494 0.00000