HEADER HYDROLASE 10-MAR-06 2DGA TITLE CRYSTAL STRUCTURE OF HEXAMERIC BETA-GLUCOSIDASE IN WHEAT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-520; COMPND 5 SYNONYM: BETA-D-GLUCOSIDASE; COMPND 6 EC: 3.2.1.21; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: BREAD WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 GENE: TAGLU1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS ALPHA/BETA BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SUE,K.YAMAZAKI,T.MIYAMOTO,S.YAJIMA REVDAT 6 20-NOV-24 2DGA 1 REMARK REVDAT 5 25-OCT-23 2DGA 1 REMARK SEQADV REVDAT 4 13-JUL-11 2DGA 1 VERSN REVDAT 3 24-FEB-09 2DGA 1 VERSN REVDAT 2 22-AUG-06 2DGA 1 JRNL REVDAT 1 04-JUL-06 2DGA 0 JRNL AUTH M.SUE,K.YAMAZAKI,S.YAJIMA,T.NOMURA,T.MATSUKAWA,H.IWAMURA, JRNL AUTH 2 T.MIYAMOTO JRNL TITL MOLECULAR AND STRUCTURAL CHARACTERIZATION OF HEXAMERIC JRNL TITL 2 BETA-D-GLUCOSIDASES IN WHEAT AND RYE. JRNL REF PLANT PHYSIOL. V. 141 1237 2006 JRNL REFN ISSN 0032-0889 JRNL PMID 16751439 JRNL DOI 10.1104/PP.106.077693 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 6714547.780 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 217826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 10846 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.002 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 34558 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1846 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.006 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3969 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 613 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.800 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 4 REMARK 4 2DGA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000025383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 95.0 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : TRIANGULAR SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 261540 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 19.50 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.10 REMARK 200 R MERGE FOR SHELL (I) : 0.56400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1V03 REMARK 200 REMARK 200 REMARK: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM HEPES PH 7.2, 1M LISO4, 150MM REMARK 280 NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 97.32500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.32500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 97.32500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.32500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 97.32500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 97.32500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 97.32500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 97.32500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 97.32500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 97.32500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 97.32500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 97.32500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 97.32500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 97.32500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 97.32500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 97.32500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 97.32500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 97.32500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 145.98750 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 48.66250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 48.66250 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 145.98750 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 145.98750 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 145.98750 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 48.66250 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 48.66250 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 145.98750 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 48.66250 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 145.98750 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 48.66250 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 145.98750 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 48.66250 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 48.66250 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 48.66250 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 145.98750 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 48.66250 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 145.98750 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 145.98750 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 145.98750 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 48.66250 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 48.66250 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 145.98750 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 145.98750 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 48.66250 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 48.66250 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 48.66250 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 48.66250 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 145.98750 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 48.66250 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 145.98750 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 48.66250 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 145.98750 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 145.98750 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 145.98750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 23090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 95740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -187.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -97.32500 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 -97.32500 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 -97.32500 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 97.32500 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -48.66250 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 48.66250 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 48.66250 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -145.98750 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 -48.66250 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 48.66250 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 -48.66250 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 -48.66250 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 -48.66250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -44 REMARK 465 HIS A -43 REMARK 465 HIS A -42 REMARK 465 HIS A -41 REMARK 465 HIS A -40 REMARK 465 HIS A -39 REMARK 465 HIS A -38 REMARK 465 SER A -37 REMARK 465 SER A -36 REMARK 465 GLY A -35 REMARK 465 LEU A -34 REMARK 465 VAL A -33 REMARK 465 PRO A -32 REMARK 465 ARG A -31 REMARK 465 GLY A -30 REMARK 465 SER A -29 REMARK 465 GLY A -28 REMARK 465 MET A -27 REMARK 465 LYS A -26 REMARK 465 GLU A -25 REMARK 465 THR A -24 REMARK 465 ALA A -23 REMARK 465 ALA A -22 REMARK 465 ALA A -21 REMARK 465 LYS A -20 REMARK 465 PHE A -19 REMARK 465 GLU A -18 REMARK 465 ARG A -17 REMARK 465 GLN A -16 REMARK 465 HIS A -15 REMARK 465 MET A -14 REMARK 465 ASP A -13 REMARK 465 SER A -12 REMARK 465 PRO A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 LYS A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 GLY A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 SER A 5 REMARK 465 LYS A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 GLU A 9 REMARK 465 PRO A 10 REMARK 465 ILE A 11 REMARK 465 LEU A 503 REMARK 465 LEU A 504 REMARK 465 LYS A 505 REMARK 465 THR A 506 REMARK 465 THR A 507 REMARK 465 ASN A 508 REMARK 465 ASN A 509 REMARK 465 ASN A 510 REMARK 465 ALA A 511 REMARK 465 THR A 512 REMARK 465 MET A 513 REMARK 465 THR A 514 REMARK 465 ALA A 515 REMARK 465 ALA A 516 REMARK 465 SER A 517 REMARK 465 VAL A 518 REMARK 465 SER A 519 REMARK 465 VAL A 520 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 -128.28 53.74 REMARK 500 ASP A 147 31.68 -73.00 REMARK 500 TYR A 156 14.24 -144.04 REMARK 500 ARG A 225 -46.70 -130.79 REMARK 500 ASN A 250 40.40 -145.02 REMARK 500 TYR A 334 -37.98 -130.04 REMARK 500 TYR A 383 75.68 -153.34 REMARK 500 ASN A 408 131.01 -172.66 REMARK 500 TRP A 463 -120.90 40.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1316 DBREF 2DGA A 1 520 UNP Q1XH05 Q1XH05_WHEAT 50 569 SEQADV 2DGA MET A -44 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -43 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -42 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -41 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -40 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -39 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -38 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA SER A -37 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA SER A -36 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLY A -35 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA LEU A -34 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA VAL A -33 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA PRO A -32 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ARG A -31 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLY A -30 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA SER A -29 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLY A -28 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA MET A -27 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA LYS A -26 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLU A -25 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA THR A -24 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ALA A -23 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ALA A -22 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ALA A -21 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA LYS A -20 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA PHE A -19 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLU A -18 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ARG A -17 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLN A -16 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA HIS A -15 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA MET A -14 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ASP A -13 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA SER A -12 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA PRO A -11 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ASP A -10 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA LEU A -9 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA GLY A -8 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA THR A -7 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ASP A -6 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ASP A -5 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ASP A -4 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ASP A -3 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA LYS A -2 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA ALA A -1 UNP Q1XH05 CLONING ARTIFACT SEQADV 2DGA MET A 0 UNP Q1XH05 CLONING ARTIFACT SEQRES 1 A 565 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 565 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 A 565 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 A 565 ASP ASP ASP LYS ALA MET ALA GLY THR PRO SER LYS PRO SEQRES 5 A 565 ALA GLU PRO ILE GLY PRO VAL PHE THR LYS LEU LYS PRO SEQRES 6 A 565 TRP GLN ILE PRO LYS ARG ASP TRP PHE ASP LYS ASP PHE SEQRES 7 A 565 LEU PHE GLY ALA SER THR SER ALA TYR GLN ILE GLU GLY SEQRES 8 A 565 ALA TRP ASN GLU ASP GLY LYS GLY PRO SER THR TRP ASP SEQRES 9 A 565 HIS PHE CYS HIS THR TYR PRO GLU ARG ILE SER ASP MET SEQRES 10 A 565 THR ASN GLY ASP VAL ALA ALA ASN SER TYR HIS LEU TYR SEQRES 11 A 565 GLU GLU ASP VAL LYS ALA LEU LYS ASP MET GLY MET LYS SEQRES 12 A 565 VAL TYR ARG PHE SER ILE SER TRP SER ARG ILE LEU PRO SEQRES 13 A 565 ASP GLY THR GLY LYS VAL ASN GLN ALA GLY ILE ASP TYR SEQRES 14 A 565 TYR ASN LYS LEU ILE ASN SER LEU ILE ASP ASN ASP ILE SEQRES 15 A 565 VAL PRO TYR VAL THR ILE TRP HIS TRP ASP THR PRO GLN SEQRES 16 A 565 ALA LEU GLU ASP LYS TYR GLY GLY PHE LEU ASN ARG GLN SEQRES 17 A 565 ILE VAL ASP ASP TYR LYS GLN PHE ALA GLU VAL CYS PHE SEQRES 18 A 565 LYS ASN PHE GLY ASP ARG VAL LYS ASN TRP PHE THR PHE SEQRES 19 A 565 ASN GLU PRO HIS THR TYR CYS CYS PHE SER TYR GLY GLU SEQRES 20 A 565 GLY ILE HIS ALA PRO GLY ARG CYS SER PRO GLY MET ASP SEQRES 21 A 565 CYS ALA VAL PRO GLU GLY ASP SER LEU ARG GLU PRO TYR SEQRES 22 A 565 THR ALA GLY HIS HIS ILE LEU LEU ALA HIS ALA GLU ALA SEQRES 23 A 565 VAL GLN LEU PHE LYS ALA ARG TYR ASN MET HIS GLY ASP SEQRES 24 A 565 SER LYS ILE GLY MET ALA PHE ASP VAL MET GLY TYR GLU SEQRES 25 A 565 PRO TYR GLN ASP SER PHE LEU ASP ASP GLN ALA ARG GLU SEQRES 26 A 565 ARG SER ILE ASP TYR ASN MET GLY TRP PHE LEU GLU PRO SEQRES 27 A 565 VAL VAL ARG GLY ASP TYR PRO PHE SER MET ARG SER LEU SEQRES 28 A 565 ILE GLY ASP ARG LEU PRO MET PHE THR LYS GLU GLU GLN SEQRES 29 A 565 GLU LYS LEU ALA SER SER CYS ASP ILE MET GLY LEU ASN SEQRES 30 A 565 TYR TYR THR SER ARG PHE SER LYS HIS VAL ASP MET SER SEQRES 31 A 565 PRO ASP PHE THR PRO THR LEU ASN THR ASP ASP ALA TYR SEQRES 32 A 565 ALA SER SER GLU THR THR GLY SER ASP GLY ASN ASP ILE SEQRES 33 A 565 GLY PRO ILE THR GLY THR TYR TRP ILE TYR MET TYR PRO SEQRES 34 A 565 LYS GLY LEU THR ASP LEU LEU LEU ILE MET LYS GLU LYS SEQRES 35 A 565 TYR GLY ASN PRO PRO VAL PHE ILE THR GLU ASN GLY ILE SEQRES 36 A 565 ALA ASP VAL GLU GLY ASP GLU SER MET PRO ASP PRO LEU SEQRES 37 A 565 ASP ASP TRP LYS ARG LEU ASP TYR LEU GLN ARG HIS ILE SEQRES 38 A 565 SER ALA VAL LYS ASP ALA ILE ASP GLN GLY ALA ASP VAL SEQRES 39 A 565 ARG GLY HIS PHE THR TRP GLY LEU ILE ASP ASN PHE GLU SEQRES 40 A 565 TRP SER LEU GLY TYR SER SER ARG PHE GLY LEU VAL TYR SEQRES 41 A 565 ILE ASP LYS ASN ASP GLY ASN LYS ARG LYS LEU LYS LYS SEQRES 42 A 565 SER ALA LYS TRP PHE SER LYS PHE ASN SER VAL PRO LYS SEQRES 43 A 565 PRO LEU LEU LYS THR THR ASN ASN ASN ALA THR MET THR SEQRES 44 A 565 ALA ALA SER VAL SER VAL HET SO4 A1001 5 HET GOL A1314 6 HET GOL A1315 6 HET GOL A1316 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 O4 S 2- FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 HOH *613(H2 O) HELIX 1 1 LYS A 19 ILE A 23 5 5 HELIX 2 2 LYS A 25 PHE A 29 5 5 HELIX 3 3 SER A 40 GLU A 45 1 6 HELIX 4 4 SER A 56 TYR A 65 1 10 HELIX 5 5 PRO A 66 ILE A 69 5 4 HELIX 6 6 ASN A 80 GLY A 96 1 17 HELIX 7 7 SER A 105 LEU A 110 1 6 HELIX 8 8 ASN A 118 ASN A 135 1 18 HELIX 9 9 PRO A 149 GLY A 157 1 9 HELIX 10 10 GLY A 158 ARG A 162 5 5 HELIX 11 11 GLN A 163 GLY A 180 1 18 HELIX 12 12 GLU A 191 GLY A 201 1 11 HELIX 13 13 ARG A 225 TYR A 249 1 25 HELIX 14 14 SER A 272 MET A 287 1 16 HELIX 15 15 MET A 287 GLY A 297 1 11 HELIX 16 16 PRO A 300 GLY A 308 1 9 HELIX 17 17 ASP A 309 LEU A 311 5 3 HELIX 18 18 THR A 315 ALA A 323 1 9 HELIX 19 19 LEU A 352 ALA A 357 5 6 HELIX 20 20 TYR A 383 LYS A 397 1 15 HELIX 21 21 ASP A 425 GLN A 445 1 21 HELIX 22 22 GLU A 462 TYR A 467 5 6 HELIX 23 23 LYS A 487 ASN A 497 1 11 SHEET 1 A10 ALA A 359 GLU A 362 0 SHEET 2 A10 ILE A 328 HIS A 341 -1 N PHE A 338 O GLU A 362 SHEET 3 A10 VAL A 403 GLU A 407 1 O PHE A 404 N MET A 329 SHEET 4 A10 VAL A 449 TRP A 455 1 O PHE A 453 N ILE A 405 SHEET 5 A10 LEU A 34 SER A 38 1 N GLY A 36 O HIS A 452 SHEET 6 A10 VAL A 99 SER A 103 1 O ARG A 101 N ALA A 37 SHEET 7 A10 VAL A 138 TRP A 144 1 O THR A 142 N PHE A 102 SHEET 8 A10 ASN A 185 ASN A 190 1 O PHE A 187 N ILE A 143 SHEET 9 A10 LYS A 256 PRO A 268 1 O GLY A 258 N THR A 188 SHEET 10 A10 ILE A 328 HIS A 341 1 O GLY A 330 N PHE A 261 SHEET 1 B 2 ASP A 412 VAL A 413 0 SHEET 2 B 2 SER A 469 ARG A 470 -1 O ARG A 470 N ASP A 412 SHEET 1 C 2 VAL A 474 ILE A 476 0 SHEET 2 C 2 ARG A 484 LEU A 486 -1 O LYS A 485 N TYR A 475 SSBOND 1 CYS A 210 CYS A 216 1555 1555 2.03 CISPEP 1 GLY A 12 PRO A 13 0 -0.04 CISPEP 2 ALA A 206 PRO A 207 0 0.51 SITE 1 AC1 8 GLN A 270 ASP A 271 SER A 366 ARG A 434 SITE 2 AC1 8 HOH A1465 HOH A1472 HOH A1589 HOH A1820 SITE 1 AC2 7 GLU A 191 ASP A 262 ASN A 332 TYR A 334 SITE 2 AC2 7 TRP A 379 GOL A1315 HOH A1741 SITE 1 AC3 11 GLN A 43 GLU A 191 TYR A 334 TRP A 379 SITE 2 AC3 11 GLU A 407 TRP A 455 GLU A 462 TRP A 463 SITE 3 AC3 11 PHE A 471 GOL A1314 HOH A1415 SITE 1 AC4 5 HIS A 205 GLU A 462 TRP A 463 SER A 464 SITE 2 AC4 5 HOH A1449 CRYST1 194.650 194.650 194.650 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005137 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005137 0.00000