HEADER PROTEIN BINDING 24-MAR-06 2DHM TITLE SOLUTION STRUCTURE OF THE BOLA PROTEIN FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN BOLA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-100; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K12 SUBSTR.; SOURCE 3 ORGANISM_TAXID: 316407; SOURCE 4 STRAIN: W3110; SOURCE 5 GENE: BOLA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCR2.1; SOURCE 10 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS STATIONARY-PHASE, STRESS-INDUCED, MORPHOGENE, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.KASAI,T.KIGAWA,S.KOSHIBA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 01-MAY-24 2DHM 1 REMARK SEQADV REVDAT 3 13-JUL-11 2DHM 1 VERSN REVDAT 2 24-FEB-09 2DHM 1 VERSN REVDAT 1 24-SEP-06 2DHM 0 JRNL AUTH T.KASAI,T.KIGAWA,S.KOSHIBA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE BOLA PROTEIN FROM ESCHERICHIA COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 2006 NOES REMARK 3 AND 114 DIHEDRAL ANGLE RESTRAINTS. REMARK 4 REMARK 4 2DHM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000025424. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.1MM BOLA U-15N,13C; 20MM REMARK 210 SODIUM PHOSPHATE BUFFER; 100MM REMARK 210 SODIUM CHLORIDE; 0.02% SODIUM REMARK 210 AZIDE; 1MM D-DTT; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9321 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 16 -37.22 -35.14 REMARK 500 1 PRO A 24 -163.87 -69.74 REMARK 500 1 PHE A 55 32.61 -89.83 REMARK 500 1 THR A 56 79.36 -67.51 REMARK 500 1 LEU A 71 36.66 -95.90 REMARK 500 1 HIS A 80 -53.31 -123.44 REMARK 500 1 PHE A 100 83.02 -67.05 REMARK 500 2 SER A 2 42.30 -83.47 REMARK 500 2 GLU A 16 -35.81 -34.49 REMARK 500 2 PRO A 24 -169.22 -69.72 REMARK 500 2 GLU A 28 123.65 -170.14 REMARK 500 2 PRO A 39 93.72 -69.77 REMARK 500 2 PHE A 55 37.57 -89.68 REMARK 500 2 THR A 56 159.34 -39.68 REMARK 500 2 GLU A 58 -72.70 -99.55 REMARK 500 2 ARG A 65 -36.88 -34.46 REMARK 500 2 LEU A 71 40.93 -106.42 REMARK 500 2 VAL A 99 122.56 -34.04 REMARK 500 2 PRO A 104 -175.98 -69.78 REMARK 500 3 ILE A 14 -73.34 -59.51 REMARK 500 3 GLN A 23 52.16 71.44 REMARK 500 3 PRO A 24 -172.46 -69.78 REMARK 500 3 PRO A 39 92.09 -69.75 REMARK 500 3 PHE A 55 36.06 -87.36 REMARK 500 3 ARG A 65 -71.41 -34.33 REMARK 500 3 ILE A 67 -70.92 -54.03 REMARK 500 3 LYS A 90 -63.29 -92.00 REMARK 500 3 GLU A 93 -30.97 -39.75 REMARK 500 3 PHE A 100 -176.87 -54.43 REMARK 500 3 ARG A 106 157.60 -47.43 REMARK 500 4 GLN A 23 51.41 74.93 REMARK 500 4 PRO A 24 -174.11 -69.77 REMARK 500 4 GLU A 28 114.61 -167.43 REMARK 500 4 ASN A 37 45.25 -94.53 REMARK 500 4 PHE A 55 34.39 -89.76 REMARK 500 4 ASN A 62 -38.77 -35.07 REMARK 500 4 HIS A 80 -51.73 -123.85 REMARK 500 4 HIS A 85 79.73 -106.16 REMARK 500 4 ILE A 89 -37.85 -39.79 REMARK 500 4 GLN A 96 42.87 -102.77 REMARK 500 4 CYS A 105 150.05 -41.62 REMARK 500 5 SER A 2 107.04 -168.46 REMARK 500 5 MET A 8 41.46 -90.28 REMARK 500 5 ARG A 11 -33.34 -34.12 REMARK 500 5 GLN A 23 54.96 74.93 REMARK 500 5 PRO A 24 -168.97 -69.80 REMARK 500 5 SER A 42 49.49 -83.72 REMARK 500 5 GLU A 58 -74.79 -100.38 REMARK 500 5 ARG A 59 110.80 -168.61 REMARK 500 5 PHE A 60 -32.10 -37.57 REMARK 500 REMARK 500 THIS ENTRY HAS 259 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ECO001000400.2 RELATED DB: TARGETDB DBREF 2DHM A 8 107 UNP P0ABE2 BOLA_ECOLI 1 100 SEQADV 2DHM GLY A 1 UNP P0ABE2 CLONING ARTIFACT SEQADV 2DHM SER A 2 UNP P0ABE2 CLONING ARTIFACT SEQADV 2DHM SER A 3 UNP P0ABE2 CLONING ARTIFACT SEQADV 2DHM GLY A 4 UNP P0ABE2 CLONING ARTIFACT SEQADV 2DHM SER A 5 UNP P0ABE2 CLONING ARTIFACT SEQADV 2DHM SER A 6 UNP P0ABE2 CLONING ARTIFACT SEQADV 2DHM GLY A 7 UNP P0ABE2 CLONING ARTIFACT SEQRES 1 A 107 GLY SER SER GLY SER SER GLY MET MET ILE ARG GLU ARG SEQRES 2 A 107 ILE GLU GLU LYS LEU ARG ALA ALA PHE GLN PRO VAL PHE SEQRES 3 A 107 LEU GLU VAL VAL ASP GLU SER TYR ARG HIS ASN VAL PRO SEQRES 4 A 107 ALA GLY SER GLU SER HIS PHE LYS VAL VAL LEU VAL SER SEQRES 5 A 107 ASP ARG PHE THR GLY GLU ARG PHE LEU ASN ARG HIS ARG SEQRES 6 A 107 MET ILE TYR SER THR LEU ALA GLU GLU LEU SER THR THR SEQRES 7 A 107 VAL HIS ALA LEU ALA LEU HIS THR TYR THR ILE LYS GLU SEQRES 8 A 107 TRP GLU GLY LEU GLN ASP THR VAL PHE ALA SER PRO PRO SEQRES 9 A 107 CYS ARG GLY HELIX 1 1 MET A 9 PHE A 22 1 14 HELIX 2 2 ASP A 53 THR A 56 5 4 HELIX 3 3 LEU A 61 LEU A 71 1 11 HELIX 4 4 LEU A 71 THR A 77 1 7 HELIX 5 5 THR A 88 GLY A 94 1 7 SHEET 1 A 3 GLU A 28 ASP A 31 0 SHEET 2 A 3 PHE A 46 VAL A 51 -1 O VAL A 49 N GLU A 28 SHEET 3 A 3 ALA A 83 TYR A 87 1 O ALA A 83 N PHE A 46 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1