data_2DKO # _entry.id 2DKO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DKO pdb_00002dko 10.2210/pdb2dko/pdb RCSB RCSB025528 ? ? WWPDB D_1000025528 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DKO _pdbx_database_status.recvd_initial_deposition_date 2006-04-12 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mittl, P.R.E.' 1 'Ganesan, R.' 2 'Jelakovic, S.' 3 'Grutter, M.G.' 4 # _citation.id primary _citation.title 'Extended Substrate Recognition in Caspase-3 Revealed by High Resolution X-ray Structure Analysis' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 359 _citation.page_first 1378 _citation.page_last 1388 _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16787777 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2006.04.051 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ganesan, R.' 1 ? primary 'Mittl, P.R.E.' 2 ? primary 'Jelakovic, S.' 3 ? primary 'Grutter, M.G.' 4 ? # _cell.entry_id 2DKO _cell.length_a 67.650 _cell.length_b 83.890 _cell.length_c 96.160 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DKO _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Caspase-3 16524.814 1 3.4.22.- ? 'Caspase-3 p17 subunit, residues 29-174' ? 2 polymer man Caspase-3 11981.682 1 3.4.22.- D175A 'Caspase-3 p12 subunit, residues 175-277' ? 3 polymer syn PHQ-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE 661.486 1 ? ? ? ? 4 water nat water 18.015 335 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name Z-DEVD-CMK # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIET ; ;SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIET ; A ? 2 'polypeptide(L)' no no ;ASGVDDDMACHKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDA TFHAKKQIPCIVSMLTKELYFYH ; ;ASGVDDDMACHKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDA TFHAKKQIPCIVSMLTKELYFYH ; B ? 3 'polypeptide(L)' no yes '(PHQ)DEVD(0QE)' XDEVDX I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 ILE n 1 4 SER n 1 5 LEU n 1 6 ASP n 1 7 ASN n 1 8 SER n 1 9 TYR n 1 10 LYS n 1 11 MET n 1 12 ASP n 1 13 TYR n 1 14 PRO n 1 15 GLU n 1 16 MET n 1 17 GLY n 1 18 LEU n 1 19 CYS n 1 20 ILE n 1 21 ILE n 1 22 ILE n 1 23 ASN n 1 24 ASN n 1 25 LYS n 1 26 ASN n 1 27 PHE n 1 28 HIS n 1 29 LYS n 1 30 SER n 1 31 THR n 1 32 GLY n 1 33 MET n 1 34 THR n 1 35 SER n 1 36 ARG n 1 37 SER n 1 38 GLY n 1 39 THR n 1 40 ASP n 1 41 VAL n 1 42 ASP n 1 43 ALA n 1 44 ALA n 1 45 ASN n 1 46 LEU n 1 47 ARG n 1 48 GLU n 1 49 THR n 1 50 PHE n 1 51 ARG n 1 52 ASN n 1 53 LEU n 1 54 LYS n 1 55 TYR n 1 56 GLU n 1 57 VAL n 1 58 ARG n 1 59 ASN n 1 60 LYS n 1 61 ASN n 1 62 ASP n 1 63 LEU n 1 64 THR n 1 65 ARG n 1 66 GLU n 1 67 GLU n 1 68 ILE n 1 69 VAL n 1 70 GLU n 1 71 LEU n 1 72 MET n 1 73 ARG n 1 74 ASP n 1 75 VAL n 1 76 SER n 1 77 LYS n 1 78 GLU n 1 79 ASP n 1 80 HIS n 1 81 SER n 1 82 LYS n 1 83 ARG n 1 84 SER n 1 85 SER n 1 86 PHE n 1 87 VAL n 1 88 CYS n 1 89 VAL n 1 90 LEU n 1 91 LEU n 1 92 SER n 1 93 HIS n 1 94 GLY n 1 95 GLU n 1 96 GLU n 1 97 GLY n 1 98 ILE n 1 99 ILE n 1 100 PHE n 1 101 GLY n 1 102 THR n 1 103 ASN n 1 104 GLY n 1 105 PRO n 1 106 VAL n 1 107 ASP n 1 108 LEU n 1 109 LYS n 1 110 LYS n 1 111 ILE n 1 112 THR n 1 113 ASN n 1 114 PHE n 1 115 PHE n 1 116 ARG n 1 117 GLY n 1 118 ASP n 1 119 ARG n 1 120 CYS n 1 121 ARG n 1 122 SER n 1 123 LEU n 1 124 THR n 1 125 GLY n 1 126 LYS n 1 127 PRO n 1 128 LYS n 1 129 LEU n 1 130 PHE n 1 131 ILE n 1 132 ILE n 1 133 GLN n 1 134 ALA n 1 135 CYS n 1 136 ARG n 1 137 GLY n 1 138 THR n 1 139 GLU n 1 140 LEU n 1 141 ASP n 1 142 CYS n 1 143 GLY n 1 144 ILE n 1 145 GLU n 1 146 THR n 2 1 ALA n 2 2 SER n 2 3 GLY n 2 4 VAL n 2 5 ASP n 2 6 ASP n 2 7 ASP n 2 8 MET n 2 9 ALA n 2 10 CYS n 2 11 HIS n 2 12 LYS n 2 13 ILE n 2 14 PRO n 2 15 VAL n 2 16 GLU n 2 17 ALA n 2 18 ASP n 2 19 PHE n 2 20 LEU n 2 21 TYR n 2 22 ALA n 2 23 TYR n 2 24 SER n 2 25 THR n 2 26 ALA n 2 27 PRO n 2 28 GLY n 2 29 TYR n 2 30 TYR n 2 31 SER n 2 32 TRP n 2 33 ARG n 2 34 ASN n 2 35 SER n 2 36 LYS n 2 37 ASP n 2 38 GLY n 2 39 SER n 2 40 TRP n 2 41 PHE n 2 42 ILE n 2 43 GLN n 2 44 SER n 2 45 LEU n 2 46 CYS n 2 47 ALA n 2 48 MET n 2 49 LEU n 2 50 LYS n 2 51 GLN n 2 52 TYR n 2 53 ALA n 2 54 ASP n 2 55 LYS n 2 56 LEU n 2 57 GLU n 2 58 PHE n 2 59 MET n 2 60 HIS n 2 61 ILE n 2 62 LEU n 2 63 THR n 2 64 ARG n 2 65 VAL n 2 66 ASN n 2 67 ARG n 2 68 LYS n 2 69 VAL n 2 70 ALA n 2 71 THR n 2 72 GLU n 2 73 PHE n 2 74 GLU n 2 75 SER n 2 76 PHE n 2 77 SER n 2 78 PHE n 2 79 ASP n 2 80 ALA n 2 81 THR n 2 82 PHE n 2 83 HIS n 2 84 ALA n 2 85 LYS n 2 86 LYS n 2 87 GLN n 2 88 ILE n 2 89 PRO n 2 90 CYS n 2 91 ILE n 2 92 VAL n 2 93 SER n 2 94 MET n 2 95 LEU n 2 96 THR n 2 97 LYS n 2 98 GLU n 2 99 LEU n 2 100 TYR n 2 101 PHE n 2 102 TYR n 2 103 HIS n 3 1 PHQ n 3 2 ASP n 3 3 GLU n 3 4 VAL n 3 5 ASP n 3 6 0QE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET11d ? ? 2 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET11d ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'chemically synthesized' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CASP3_HUMAN P42574 1 ;SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIET ; 29 ? 2 UNP CASP3_HUMAN P42574 2 ;DSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDA TFHAKKQIPCIVSMLTKELYFYH ; 175 ? 3 PDB 2DKO 2DKO 3 '(PHQ)DEVD(0QE)' 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DKO A 1 ? 146 ? P42574 29 ? 174 ? 29 174 2 2 2DKO B 1 ? 103 ? P42574 175 ? 277 ? 175 277 3 3 2DKO I 1 ? 6 ? 2DKO 1 ? 6 ? 1 6 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 2DKO _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P42574 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 175 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 175 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0QE non-polymer . chloromethane 'Chloro Methyl group' 'C H3 Cl' 50.488 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PHQ non-polymer . 'benzyl chlorocarbonate' ? 'C8 H7 Cl O2' 170.593 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2DKO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.75 _exptl_crystal_grow.pdbx_details 'pH 4.75, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-05-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8498 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 0.8498 _diffrn_source.pdbx_wavelength_list 0.8498 # _reflns.entry_id 2DKO _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.06 _reflns.number_obs 113110 _reflns.number_all 113110 _reflns.percent_possible_obs 92 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.06 _reflns_shell.d_res_low 1.15 _reflns_shell.percent_possible_all 89 _reflns_shell.Rmerge_I_obs 0.366 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.06 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2DKO _refine.ls_number_reflns_obs 113110 _refine.ls_number_reflns_all 113110 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.06 _refine.ls_percent_reflns_obs 89.9 _refine.ls_R_factor_obs 0.142 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.142 _refine.ls_R_factor_R_free 0.1747 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 1.8 _refine.ls_number_reflns_R_free 2049 _refine.ls_number_parameters 20202 _refine.ls_number_restraints 24660 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 1cp3 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2DKO _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 20 _refine_analyze.occupancy_sum_hydrogen 1933.00 _refine_analyze.occupancy_sum_non_hydrogen 2362.50 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2029 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 335 _refine_hist.number_atoms_total 2364 _refine_hist.d_res_high 1.06 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.035 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0301 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.086 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.113 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.044 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.054 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2DKO _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.142 _pdbx_refine.free_R_factor_no_cutoff 0.175 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 1.8 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 2049 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1081 _pdbx_refine.free_R_factor_4sig_cutoff 0.149 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 1.9 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1255 _pdbx_refine.number_reflns_obs_4sig_cutoff 65131 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2DKO _struct.title 'Extended substrate recognition in caspase-3 revealed by high resolution X-ray structure analysis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DKO _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;LOW BARRIER HYDROGEN BOND, CASPASE, DRUG DESIGN, RADIATION DAMAGE, TETRAHEDRAL INTERMEDIATE, PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 28 ? GLY A 32 ? HIS A 56 GLY A 60 5 ? 5 HELX_P HELX_P2 2 GLY A 38 ? LEU A 53 ? GLY A 66 LEU A 81 1 ? 16 HELX_P HELX_P3 3 THR A 64 ? GLU A 78 ? THR A 92 GLU A 106 1 ? 15 HELX_P HELX_P4 4 LEU A 108 ? PHE A 114 ? LEU A 136 PHE A 142 1 ? 7 HELX_P HELX_P5 5 CYS A 120 ? THR A 124 ? CYS A 148 THR A 152 5 ? 5 HELX_P HELX_P6 6 TRP B 40 ? ALA B 53 ? TRP B 214 ALA B 227 1 ? 14 HELX_P HELX_P7 7 GLU B 57 ? PHE B 73 ? GLU B 231 PHE B 247 1 ? 17 HELX_P HELX_P8 8 ASP B 79 ? HIS B 83 ? ASP B 253 HIS B 257 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A CYS 135 SG ? ? ? 1_555 C ASP 5 C ? ? A CYS 163 I ASP 5 1_555 ? ? ? ? ? ? ? 2.028 ? ? covale2 covale both ? C ASP 5 C ? ? ? 1_555 C 0QE 6 C1 ? ? I ASP 5 I 0QE 6 1_555 ? ? ? ? ? ? ? 1.592 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 56 ? ASN A 61 ? GLU A 84 ASN A 89 A 2 GLU A 15 ? ASN A 23 ? GLU A 43 ASN A 51 A 3 ARG A 83 ? LEU A 91 ? ARG A 111 LEU A 119 A 4 LYS A 128 ? GLN A 133 ? LYS A 156 GLN A 161 A 5 PHE B 19 ? TYR B 23 ? PHE B 193 TYR B 197 A 6 CYS B 90 ? SER B 93 ? CYS B 264 SER B 267 B 1 GLY A 94 ? GLU A 95 ? GLY A 122 GLU A 123 B 2 ILE A 98 ? GLY A 101 ? ILE A 126 GLY A 129 B 3 GLY A 104 ? ASP A 107 ? GLY A 132 ASP A 135 C 1 GLY B 38 ? SER B 39 ? GLY B 212 SER B 213 C 2 TRP B 32 ? ASN B 34 ? TRP B 206 ASN B 208 C 3 GLU C 3 ? VAL C 4 ? GLU I 3 VAL I 4 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 60 ? O LYS A 88 N ASN A 23 ? N ASN A 51 A 2 3 N ILE A 20 ? N ILE A 48 O VAL A 89 ? O VAL A 117 A 3 4 N PHE A 86 ? N PHE A 114 O LEU A 129 ? O LEU A 157 A 4 5 N PHE A 130 ? N PHE A 158 O LEU B 20 ? O LEU B 194 A 5 6 N TYR B 21 ? N TYR B 195 O VAL B 92 ? O VAL B 266 B 1 2 N GLU A 95 ? N GLU A 123 O ILE A 98 ? O ILE A 126 B 2 3 N GLY A 101 ? N GLY A 129 O GLY A 104 ? O GLY A 132 C 1 2 O GLY B 38 ? O GLY B 212 N ASN B 34 ? N ASN B 208 C 2 3 N ARG B 33 ? N ARG B 207 O GLU C 3 ? O GLU I 3 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 24 _struct_site.details 'BINDING SITE FOR CHAIN I OF PHQ-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 SER A 30 ? SER A 58 . ? 2_665 ? 2 AC1 24 ARG A 36 ? ARG A 64 . ? 1_555 ? 3 AC1 24 SER A 37 ? SER A 65 . ? 1_555 ? 4 AC1 24 HIS A 93 ? HIS A 121 . ? 1_555 ? 5 AC1 24 GLY A 94 ? GLY A 122 . ? 1_555 ? 6 AC1 24 GLN A 133 ? GLN A 161 . ? 1_555 ? 7 AC1 24 CYS A 135 ? CYS A 163 . ? 1_555 ? 8 AC1 24 HOH D . ? HOH A 196 . ? 2_665 ? 9 AC1 24 HOH D . ? HOH A 391 . ? 1_555 ? 10 AC1 24 ASP B 5 ? ASP B 179 . ? 3_656 ? 11 AC1 24 TYR B 30 ? TYR B 204 . ? 1_555 ? 12 AC1 24 SER B 31 ? SER B 205 . ? 1_555 ? 13 AC1 24 TRP B 32 ? TRP B 206 . ? 1_555 ? 14 AC1 24 ARG B 33 ? ARG B 207 . ? 1_555 ? 15 AC1 24 ASN B 34 ? ASN B 208 . ? 1_555 ? 16 AC1 24 TRP B 40 ? TRP B 214 . ? 1_555 ? 17 AC1 24 SER B 75 ? SER B 249 . ? 1_555 ? 18 AC1 24 PHE B 76 ? PHE B 250 . ? 1_555 ? 19 AC1 24 HOH E . ? HOH B 310 . ? 1_555 ? 20 AC1 24 HOH E . ? HOH B 343 . ? 1_555 ? 21 AC1 24 HOH F . ? HOH I 181 . ? 1_555 ? 22 AC1 24 HOH F . ? HOH I 203 . ? 1_555 ? 23 AC1 24 HOH F . ? HOH I 236 . ? 1_555 ? 24 AC1 24 HOH F . ? HOH I 238 . ? 1_555 ? # _database_PDB_matrix.entry_id 2DKO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2DKO _atom_sites.fract_transf_matrix[1][1] 0.014782 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011920 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010399 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 29 29 SER SER A . n A 1 2 GLY 2 30 30 GLY GLY A . n A 1 3 ILE 3 31 31 ILE ILE A . n A 1 4 SER 4 32 32 SER SER A . n A 1 5 LEU 5 33 33 LEU LEU A . n A 1 6 ASP 6 34 34 ASP ASP A . n A 1 7 ASN 7 35 35 ASN ASN A . n A 1 8 SER 8 36 36 SER SER A . n A 1 9 TYR 9 37 37 TYR TYR A . n A 1 10 LYS 10 38 38 LYS LYS A . n A 1 11 MET 11 39 39 MET MET A . n A 1 12 ASP 12 40 40 ASP ASP A . n A 1 13 TYR 13 41 41 TYR TYR A . n A 1 14 PRO 14 42 42 PRO PRO A . n A 1 15 GLU 15 43 43 GLU GLU A . n A 1 16 MET 16 44 44 MET MET A . n A 1 17 GLY 17 45 45 GLY GLY A . n A 1 18 LEU 18 46 46 LEU LEU A . n A 1 19 CYS 19 47 47 CYS CYS A . n A 1 20 ILE 20 48 48 ILE ILE A . n A 1 21 ILE 21 49 49 ILE ILE A . n A 1 22 ILE 22 50 50 ILE ILE A . n A 1 23 ASN 23 51 51 ASN ASN A . n A 1 24 ASN 24 52 52 ASN ASN A . n A 1 25 LYS 25 53 53 LYS LYS A . n A 1 26 ASN 26 54 54 ASN ASN A . n A 1 27 PHE 27 55 55 PHE PHE A . n A 1 28 HIS 28 56 56 HIS HIS A . n A 1 29 LYS 29 57 57 LYS LYS A . n A 1 30 SER 30 58 58 SER SER A . n A 1 31 THR 31 59 59 THR THR A . n A 1 32 GLY 32 60 60 GLY GLY A . n A 1 33 MET 33 61 61 MET MET A . n A 1 34 THR 34 62 62 THR THR A . n A 1 35 SER 35 63 63 SER SER A . n A 1 36 ARG 36 64 64 ARG ARG A . n A 1 37 SER 37 65 65 SER SER A . n A 1 38 GLY 38 66 66 GLY GLY A . n A 1 39 THR 39 67 67 THR THR A . n A 1 40 ASP 40 68 68 ASP ASP A . n A 1 41 VAL 41 69 69 VAL VAL A . n A 1 42 ASP 42 70 70 ASP ASP A . n A 1 43 ALA 43 71 71 ALA ALA A . n A 1 44 ALA 44 72 72 ALA ALA A . n A 1 45 ASN 45 73 73 ASN ASN A . n A 1 46 LEU 46 74 74 LEU LEU A . n A 1 47 ARG 47 75 75 ARG ARG A . n A 1 48 GLU 48 76 76 GLU GLU A . n A 1 49 THR 49 77 77 THR THR A . n A 1 50 PHE 50 78 78 PHE PHE A . n A 1 51 ARG 51 79 79 ARG ARG A . n A 1 52 ASN 52 80 80 ASN ASN A . n A 1 53 LEU 53 81 81 LEU LEU A . n A 1 54 LYS 54 82 82 LYS LYS A . n A 1 55 TYR 55 83 83 TYR TYR A . n A 1 56 GLU 56 84 84 GLU GLU A . n A 1 57 VAL 57 85 85 VAL VAL A . n A 1 58 ARG 58 86 86 ARG ARG A . n A 1 59 ASN 59 87 87 ASN ASN A . n A 1 60 LYS 60 88 88 LYS LYS A . n A 1 61 ASN 61 89 89 ASN ASN A . n A 1 62 ASP 62 90 90 ASP ASP A . n A 1 63 LEU 63 91 91 LEU LEU A . n A 1 64 THR 64 92 92 THR THR A . n A 1 65 ARG 65 93 93 ARG ARG A . n A 1 66 GLU 66 94 94 GLU GLU A . n A 1 67 GLU 67 95 95 GLU GLU A . n A 1 68 ILE 68 96 96 ILE ILE A . n A 1 69 VAL 69 97 97 VAL VAL A . n A 1 70 GLU 70 98 98 GLU GLU A . n A 1 71 LEU 71 99 99 LEU LEU A . n A 1 72 MET 72 100 100 MET MET A . n A 1 73 ARG 73 101 101 ARG ARG A . n A 1 74 ASP 74 102 102 ASP ASP A . n A 1 75 VAL 75 103 103 VAL VAL A . n A 1 76 SER 76 104 104 SER SER A . n A 1 77 LYS 77 105 105 LYS LYS A . n A 1 78 GLU 78 106 106 GLU GLU A . n A 1 79 ASP 79 107 107 ASP ASP A . n A 1 80 HIS 80 108 108 HIS HIS A . n A 1 81 SER 81 109 109 SER SER A . n A 1 82 LYS 82 110 110 LYS LYS A . n A 1 83 ARG 83 111 111 ARG ARG A . n A 1 84 SER 84 112 112 SER SER A . n A 1 85 SER 85 113 113 SER SER A . n A 1 86 PHE 86 114 114 PHE PHE A . n A 1 87 VAL 87 115 115 VAL VAL A . n A 1 88 CYS 88 116 116 CYS CYS A . n A 1 89 VAL 89 117 117 VAL VAL A . n A 1 90 LEU 90 118 118 LEU LEU A . n A 1 91 LEU 91 119 119 LEU LEU A . n A 1 92 SER 92 120 120 SER SER A . n A 1 93 HIS 93 121 121 HIS HIS A . n A 1 94 GLY 94 122 122 GLY GLY A . n A 1 95 GLU 95 123 123 GLU GLU A . n A 1 96 GLU 96 124 124 GLU GLU A . n A 1 97 GLY 97 125 125 GLY GLY A . n A 1 98 ILE 98 126 126 ILE ILE A . n A 1 99 ILE 99 127 127 ILE ILE A . n A 1 100 PHE 100 128 128 PHE PHE A . n A 1 101 GLY 101 129 129 GLY GLY A . n A 1 102 THR 102 130 130 THR THR A . n A 1 103 ASN 103 131 131 ASN ASN A . n A 1 104 GLY 104 132 132 GLY GLY A . n A 1 105 PRO 105 133 133 PRO PRO A . n A 1 106 VAL 106 134 134 VAL VAL A . n A 1 107 ASP 107 135 135 ASP ASP A . n A 1 108 LEU 108 136 136 LEU LEU A . n A 1 109 LYS 109 137 137 LYS LYS A . n A 1 110 LYS 110 138 138 LYS LYS A . n A 1 111 ILE 111 139 139 ILE ILE A . n A 1 112 THR 112 140 140 THR THR A . n A 1 113 ASN 113 141 141 ASN ASN A . n A 1 114 PHE 114 142 142 PHE PHE A . n A 1 115 PHE 115 143 143 PHE PHE A . n A 1 116 ARG 116 144 144 ARG ARG A . n A 1 117 GLY 117 145 145 GLY GLY A . n A 1 118 ASP 118 146 146 ASP ASP A . n A 1 119 ARG 119 147 147 ARG ARG A . n A 1 120 CYS 120 148 148 CYS CYS A . n A 1 121 ARG 121 149 149 ARG ARG A . n A 1 122 SER 122 150 150 SER SER A . n A 1 123 LEU 123 151 151 LEU LEU A . n A 1 124 THR 124 152 152 THR THR A . n A 1 125 GLY 125 153 153 GLY GLY A . n A 1 126 LYS 126 154 154 LYS LYS A . n A 1 127 PRO 127 155 155 PRO PRO A . n A 1 128 LYS 128 156 156 LYS LYS A . n A 1 129 LEU 129 157 157 LEU LEU A . n A 1 130 PHE 130 158 158 PHE PHE A . n A 1 131 ILE 131 159 159 ILE ILE A . n A 1 132 ILE 132 160 160 ILE ILE A . n A 1 133 GLN 133 161 161 GLN GLN A . n A 1 134 ALA 134 162 162 ALA ALA A . n A 1 135 CYS 135 163 163 CYS CYS A . n A 1 136 ARG 136 164 164 ARG ARG A . n A 1 137 GLY 137 165 165 GLY GLY A . n A 1 138 THR 138 166 166 THR THR A . n A 1 139 GLU 139 167 167 GLU GLU A . n A 1 140 LEU 140 168 168 LEU LEU A . n A 1 141 ASP 141 169 169 ASP ASP A . n A 1 142 CYS 142 170 170 CYS CYS A . n A 1 143 GLY 143 171 171 GLY GLY A . n A 1 144 ILE 144 172 172 ILE ILE A . n A 1 145 GLU 145 173 173 GLU GLU A . n A 1 146 THR 146 174 174 THR THR A . n B 2 1 ALA 1 175 175 ALA ALA B . n B 2 2 SER 2 176 176 SER SER B . n B 2 3 GLY 3 177 177 GLY GLY B . n B 2 4 VAL 4 178 178 VAL VAL B . n B 2 5 ASP 5 179 179 ASP ASP B . n B 2 6 ASP 6 180 180 ASP ASP B . n B 2 7 ASP 7 181 181 ASP ASP B . n B 2 8 MET 8 182 182 MET MET B . n B 2 9 ALA 9 183 183 ALA ALA B . n B 2 10 CYS 10 184 184 CYS CYS B . n B 2 11 HIS 11 185 185 HIS HIS B . n B 2 12 LYS 12 186 186 LYS LYS B . n B 2 13 ILE 13 187 187 ILE ILE B . n B 2 14 PRO 14 188 188 PRO PRO B . n B 2 15 VAL 15 189 189 VAL VAL B . n B 2 16 GLU 16 190 190 GLU GLU B . n B 2 17 ALA 17 191 191 ALA ALA B . n B 2 18 ASP 18 192 192 ASP ASP B . n B 2 19 PHE 19 193 193 PHE PHE B . n B 2 20 LEU 20 194 194 LEU LEU B . n B 2 21 TYR 21 195 195 TYR TYR B . n B 2 22 ALA 22 196 196 ALA ALA B . n B 2 23 TYR 23 197 197 TYR TYR B . n B 2 24 SER 24 198 198 SER SER B . n B 2 25 THR 25 199 199 THR THR B . n B 2 26 ALA 26 200 200 ALA ALA B . n B 2 27 PRO 27 201 201 PRO PRO B . n B 2 28 GLY 28 202 202 GLY GLY B . n B 2 29 TYR 29 203 203 TYR TYR B . n B 2 30 TYR 30 204 204 TYR TYR B . n B 2 31 SER 31 205 205 SER SER B . n B 2 32 TRP 32 206 206 TRP TRP B . n B 2 33 ARG 33 207 207 ARG ARG B . n B 2 34 ASN 34 208 208 ASN ASN B . n B 2 35 SER 35 209 209 SER SER B . n B 2 36 LYS 36 210 210 LYS LYS B . n B 2 37 ASP 37 211 211 ASP ASP B . n B 2 38 GLY 38 212 212 GLY GLY B . n B 2 39 SER 39 213 213 SER SER B . n B 2 40 TRP 40 214 214 TRP TRP B . n B 2 41 PHE 41 215 215 PHE PHE B . n B 2 42 ILE 42 216 216 ILE ILE B . n B 2 43 GLN 43 217 217 GLN GLN B . n B 2 44 SER 44 218 218 SER SER B . n B 2 45 LEU 45 219 219 LEU LEU B . n B 2 46 CYS 46 220 220 CYS CYS B . n B 2 47 ALA 47 221 221 ALA ALA B . n B 2 48 MET 48 222 222 MET MET B . n B 2 49 LEU 49 223 223 LEU LEU B . n B 2 50 LYS 50 224 224 LYS LYS B . n B 2 51 GLN 51 225 225 GLN GLN B . n B 2 52 TYR 52 226 226 TYR TYR B . n B 2 53 ALA 53 227 227 ALA ALA B . n B 2 54 ASP 54 228 228 ASP ASP B . n B 2 55 LYS 55 229 229 LYS LYS B . n B 2 56 LEU 56 230 230 LEU LEU B . n B 2 57 GLU 57 231 231 GLU GLU B . n B 2 58 PHE 58 232 232 PHE PHE B . n B 2 59 MET 59 233 233 MET MET B . n B 2 60 HIS 60 234 234 HIS HIS B . n B 2 61 ILE 61 235 235 ILE ILE B . n B 2 62 LEU 62 236 236 LEU LEU B . n B 2 63 THR 63 237 237 THR THR B . n B 2 64 ARG 64 238 238 ARG ARG B . n B 2 65 VAL 65 239 239 VAL VAL B . n B 2 66 ASN 66 240 240 ASN ASN B . n B 2 67 ARG 67 241 241 ARG ARG B . n B 2 68 LYS 68 242 242 LYS LYS B . n B 2 69 VAL 69 243 243 VAL VAL B . n B 2 70 ALA 70 244 244 ALA ALA B . n B 2 71 THR 71 245 245 THR THR B . n B 2 72 GLU 72 246 246 GLU GLU B . n B 2 73 PHE 73 247 247 PHE PHE B . n B 2 74 GLU 74 248 248 GLU GLU B . n B 2 75 SER 75 249 249 SER SER B . n B 2 76 PHE 76 250 250 PHE PHE B . n B 2 77 SER 77 251 251 SER SER B . n B 2 78 PHE 78 252 252 PHE PHE B . n B 2 79 ASP 79 253 253 ASP ASP B . n B 2 80 ALA 80 254 254 ALA ALA B . n B 2 81 THR 81 255 255 THR THR B . n B 2 82 PHE 82 256 256 PHE PHE B . n B 2 83 HIS 83 257 257 HIS HIS B . n B 2 84 ALA 84 258 258 ALA ALA B . n B 2 85 LYS 85 259 259 LYS LYS B . n B 2 86 LYS 86 260 260 LYS LYS B . n B 2 87 GLN 87 261 261 GLN GLN B . n B 2 88 ILE 88 262 262 ILE ILE B . n B 2 89 PRO 89 263 263 PRO PRO B . n B 2 90 CYS 90 264 264 CYS CYS B . n B 2 91 ILE 91 265 265 ILE ILE B . n B 2 92 VAL 92 266 266 VAL VAL B . n B 2 93 SER 93 267 267 SER SER B . n B 2 94 MET 94 268 268 MET MET B . n B 2 95 LEU 95 269 269 LEU LEU B . n B 2 96 THR 96 270 270 THR THR B . n B 2 97 LYS 97 271 271 LYS LYS B . n B 2 98 GLU 98 272 272 GLU GLU B . n B 2 99 LEU 99 273 273 LEU LEU B . n B 2 100 TYR 100 274 274 TYR TYR B . n B 2 101 PHE 101 275 275 PHE PHE B . n B 2 102 TYR 102 276 276 TYR TYR B . n B 2 103 HIS 103 277 277 HIS HIS B . n C 3 1 PHQ 1 1 ? ? ? I . n C 3 2 ASP 2 2 1 ASP ASP I . n C 3 3 GLU 3 3 2 GLU GLU I . n C 3 4 VAL 4 4 3 VAL VAL I . n C 3 5 ASP 5 5 4 ASP ASP I . n C 3 6 0QE 6 6 4 0QE 0QE I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 175 175 HOH HOH A . D 4 HOH 2 176 176 HOH HOH A . D 4 HOH 3 177 177 HOH HOH A . D 4 HOH 4 178 178 HOH HOH A . D 4 HOH 5 179 179 HOH HOH A . D 4 HOH 6 180 180 HOH HOH A . D 4 HOH 7 181 181 HOH HOH A . D 4 HOH 8 182 182 HOH HOH A . D 4 HOH 9 183 183 HOH HOH A . D 4 HOH 10 184 184 HOH HOH A . D 4 HOH 11 185 185 HOH HOH A . D 4 HOH 12 186 186 HOH HOH A . D 4 HOH 13 187 187 HOH HOH A . D 4 HOH 14 188 188 HOH HOH A . D 4 HOH 15 189 189 HOH HOH A . D 4 HOH 16 190 190 HOH HOH A . D 4 HOH 17 191 191 HOH HOH A . D 4 HOH 18 192 192 HOH HOH A . D 4 HOH 19 193 193 HOH HOH A . D 4 HOH 20 194 194 HOH HOH A . D 4 HOH 21 195 195 HOH HOH A . D 4 HOH 22 196 196 HOH HOH A . D 4 HOH 23 197 197 HOH HOH A . D 4 HOH 24 198 198 HOH HOH A . D 4 HOH 25 199 199 HOH HOH A . D 4 HOH 26 200 200 HOH HOH A . D 4 HOH 27 201 201 HOH HOH A . D 4 HOH 28 202 202 HOH HOH A . D 4 HOH 29 203 203 HOH HOH A . D 4 HOH 30 204 204 HOH HOH A . D 4 HOH 31 205 205 HOH HOH A . D 4 HOH 32 206 206 HOH HOH A . D 4 HOH 33 207 207 HOH HOH A . D 4 HOH 34 208 208 HOH HOH A . D 4 HOH 35 209 209 HOH HOH A . D 4 HOH 36 210 210 HOH HOH A . D 4 HOH 37 211 211 HOH HOH A . D 4 HOH 38 212 212 HOH HOH A . D 4 HOH 39 213 213 HOH HOH A . D 4 HOH 40 214 214 HOH HOH A . D 4 HOH 41 215 215 HOH HOH A . D 4 HOH 42 216 216 HOH HOH A . D 4 HOH 43 217 217 HOH HOH A . D 4 HOH 44 218 218 HOH HOH A . D 4 HOH 45 219 219 HOH HOH A . D 4 HOH 46 220 220 HOH HOH A . D 4 HOH 47 221 221 HOH HOH A . D 4 HOH 48 222 222 HOH HOH A . D 4 HOH 49 223 223 HOH HOH A . D 4 HOH 50 224 224 HOH HOH A . D 4 HOH 51 225 225 HOH HOH A . D 4 HOH 52 226 226 HOH HOH A . D 4 HOH 53 227 227 HOH HOH A . D 4 HOH 54 228 228 HOH HOH A . D 4 HOH 55 229 229 HOH HOH A . D 4 HOH 56 230 230 HOH HOH A . D 4 HOH 57 231 231 HOH HOH A . D 4 HOH 58 232 232 HOH HOH A . D 4 HOH 59 233 233 HOH HOH A . D 4 HOH 60 234 234 HOH HOH A . D 4 HOH 61 235 235 HOH HOH A . D 4 HOH 62 236 236 HOH HOH A . D 4 HOH 63 237 237 HOH HOH A . D 4 HOH 64 238 238 HOH HOH A . D 4 HOH 65 239 239 HOH HOH A . D 4 HOH 66 240 240 HOH HOH A . D 4 HOH 67 241 241 HOH HOH A . D 4 HOH 68 242 242 HOH HOH A . D 4 HOH 69 243 243 HOH HOH A . D 4 HOH 70 244 244 HOH HOH A . D 4 HOH 71 245 245 HOH HOH A . D 4 HOH 72 246 246 HOH HOH A . D 4 HOH 73 247 247 HOH HOH A . D 4 HOH 74 248 248 HOH HOH A . D 4 HOH 75 249 249 HOH HOH A . D 4 HOH 76 250 250 HOH HOH A . D 4 HOH 77 251 251 HOH HOH A . D 4 HOH 78 252 252 HOH HOH A . D 4 HOH 79 253 253 HOH HOH A . D 4 HOH 80 254 254 HOH HOH A . D 4 HOH 81 255 255 HOH HOH A . D 4 HOH 82 256 256 HOH HOH A . D 4 HOH 83 257 257 HOH HOH A . D 4 HOH 84 258 258 HOH HOH A . D 4 HOH 85 259 259 HOH HOH A . D 4 HOH 86 260 260 HOH HOH A . D 4 HOH 87 261 261 HOH HOH A . D 4 HOH 88 262 262 HOH HOH A . D 4 HOH 89 263 263 HOH HOH A . D 4 HOH 90 264 264 HOH HOH A . D 4 HOH 91 265 265 HOH HOH A . D 4 HOH 92 266 266 HOH HOH A . D 4 HOH 93 267 267 HOH HOH A . D 4 HOH 94 268 268 HOH HOH A . D 4 HOH 95 269 269 HOH HOH A . D 4 HOH 96 270 270 HOH HOH A . D 4 HOH 97 271 271 HOH HOH A . D 4 HOH 98 272 272 HOH HOH A . D 4 HOH 99 273 273 HOH HOH A . D 4 HOH 100 274 274 HOH HOH A . D 4 HOH 101 275 275 HOH HOH A . D 4 HOH 102 276 276 HOH HOH A . D 4 HOH 103 277 277 HOH HOH A . D 4 HOH 104 278 278 HOH HOH A . D 4 HOH 105 279 279 HOH HOH A . D 4 HOH 106 280 280 HOH HOH A . D 4 HOH 107 281 281 HOH HOH A . D 4 HOH 108 282 282 HOH HOH A . D 4 HOH 109 283 283 HOH HOH A . D 4 HOH 110 284 284 HOH HOH A . D 4 HOH 111 285 285 HOH HOH A . D 4 HOH 112 286 286 HOH HOH A . D 4 HOH 113 287 287 HOH HOH A . D 4 HOH 114 288 288 HOH HOH A . D 4 HOH 115 289 289 HOH HOH A . D 4 HOH 116 290 290 HOH HOH A . D 4 HOH 117 291 291 HOH HOH A . D 4 HOH 118 292 292 HOH HOH A . D 4 HOH 119 293 293 HOH HOH A . D 4 HOH 120 294 294 HOH HOH A . D 4 HOH 121 295 295 HOH HOH A . D 4 HOH 122 296 296 HOH HOH A . D 4 HOH 123 297 297 HOH HOH A . D 4 HOH 124 298 298 HOH HOH A . D 4 HOH 125 299 299 HOH HOH A . D 4 HOH 126 300 300 HOH HOH A . D 4 HOH 127 301 301 HOH HOH A . D 4 HOH 128 302 302 HOH HOH A . D 4 HOH 129 303 303 HOH HOH A . D 4 HOH 130 304 304 HOH HOH A . D 4 HOH 131 305 305 HOH HOH A . D 4 HOH 132 306 306 HOH HOH A . D 4 HOH 133 307 307 HOH HOH A . D 4 HOH 134 308 308 HOH HOH A . D 4 HOH 135 309 309 HOH HOH A . D 4 HOH 136 310 310 HOH HOH A . D 4 HOH 137 311 311 HOH HOH A . D 4 HOH 138 312 312 HOH HOH A . D 4 HOH 139 313 313 HOH HOH A . D 4 HOH 140 314 314 HOH HOH A . D 4 HOH 141 315 315 HOH HOH A . D 4 HOH 142 316 316 HOH HOH A . D 4 HOH 143 317 317 HOH HOH A . D 4 HOH 144 318 318 HOH HOH A . D 4 HOH 145 319 319 HOH HOH A . D 4 HOH 146 320 320 HOH HOH A . D 4 HOH 147 321 321 HOH HOH A . D 4 HOH 148 322 322 HOH HOH A . D 4 HOH 149 323 323 HOH HOH A . D 4 HOH 150 324 324 HOH HOH A . D 4 HOH 151 325 325 HOH HOH A . D 4 HOH 152 326 326 HOH HOH A . D 4 HOH 153 327 327 HOH HOH A . D 4 HOH 154 328 328 HOH HOH A . D 4 HOH 155 329 329 HOH HOH A . D 4 HOH 156 330 330 HOH HOH A . D 4 HOH 157 331 331 HOH HOH A . D 4 HOH 158 332 332 HOH HOH A . D 4 HOH 159 333 333 HOH HOH A . D 4 HOH 160 334 334 HOH HOH A . D 4 HOH 161 335 335 HOH HOH A . D 4 HOH 162 336 336 HOH HOH A . D 4 HOH 163 337 337 HOH HOH A . D 4 HOH 164 338 338 HOH HOH A . D 4 HOH 165 339 339 HOH HOH A . D 4 HOH 166 340 340 HOH HOH A . D 4 HOH 167 341 341 HOH HOH A . D 4 HOH 168 342 342 HOH HOH A . D 4 HOH 169 343 343 HOH HOH A . D 4 HOH 170 344 344 HOH HOH A . D 4 HOH 171 345 345 HOH HOH A . D 4 HOH 172 346 346 HOH HOH A . D 4 HOH 173 347 347 HOH HOH A . D 4 HOH 174 348 348 HOH HOH A . D 4 HOH 175 349 349 HOH HOH A . D 4 HOH 176 350 350 HOH HOH A . D 4 HOH 177 351 351 HOH HOH A . D 4 HOH 178 352 352 HOH HOH A . D 4 HOH 179 353 353 HOH HOH A . D 4 HOH 180 354 354 HOH HOH A . D 4 HOH 181 355 355 HOH HOH A . D 4 HOH 182 356 356 HOH HOH A . D 4 HOH 183 357 357 HOH HOH A . D 4 HOH 184 358 358 HOH HOH A . D 4 HOH 185 359 359 HOH HOH A . D 4 HOH 186 360 360 HOH HOH A . D 4 HOH 187 361 361 HOH HOH A . D 4 HOH 188 362 362 HOH HOH A . D 4 HOH 189 363 363 HOH HOH A . D 4 HOH 190 364 364 HOH HOH A . D 4 HOH 191 365 365 HOH HOH A . D 4 HOH 192 366 366 HOH HOH A . D 4 HOH 193 367 367 HOH HOH A . D 4 HOH 194 368 368 HOH HOH A . D 4 HOH 195 369 369 HOH HOH A . D 4 HOH 196 370 370 HOH HOH A . D 4 HOH 197 371 371 HOH HOH A . D 4 HOH 198 372 372 HOH HOH A . D 4 HOH 199 373 373 HOH HOH A . D 4 HOH 200 374 374 HOH HOH A . D 4 HOH 201 375 375 HOH HOH A . D 4 HOH 202 376 376 HOH HOH A . D 4 HOH 203 377 377 HOH HOH A . D 4 HOH 204 378 378 HOH HOH A . D 4 HOH 205 379 379 HOH HOH A . D 4 HOH 206 380 380 HOH HOH A . D 4 HOH 207 381 381 HOH HOH A . D 4 HOH 208 382 382 HOH HOH A . D 4 HOH 209 383 383 HOH HOH A . D 4 HOH 210 384 384 HOH HOH A . D 4 HOH 211 385 385 HOH HOH A . D 4 HOH 212 386 386 HOH HOH A . D 4 HOH 213 387 387 HOH HOH A . D 4 HOH 214 388 388 HOH HOH A . D 4 HOH 215 389 389 HOH HOH A . D 4 HOH 216 390 390 HOH HOH A . D 4 HOH 217 391 391 HOH HOH A . D 4 HOH 218 392 392 HOH HOH A . D 4 HOH 219 393 393 HOH HOH A . E 4 HOH 1 278 278 HOH HOH B . E 4 HOH 2 279 279 HOH HOH B . E 4 HOH 3 280 280 HOH HOH B . E 4 HOH 4 281 281 HOH HOH B . E 4 HOH 5 282 282 HOH HOH B . E 4 HOH 6 283 283 HOH HOH B . E 4 HOH 7 284 284 HOH HOH B . E 4 HOH 8 285 285 HOH HOH B . E 4 HOH 9 286 286 HOH HOH B . E 4 HOH 10 287 287 HOH HOH B . E 4 HOH 11 288 288 HOH HOH B . E 4 HOH 12 289 289 HOH HOH B . E 4 HOH 13 290 290 HOH HOH B . E 4 HOH 14 291 291 HOH HOH B . E 4 HOH 15 292 292 HOH HOH B . E 4 HOH 16 293 293 HOH HOH B . E 4 HOH 17 294 294 HOH HOH B . E 4 HOH 18 295 295 HOH HOH B . E 4 HOH 19 296 296 HOH HOH B . E 4 HOH 20 297 297 HOH HOH B . E 4 HOH 21 298 298 HOH HOH B . E 4 HOH 22 299 299 HOH HOH B . E 4 HOH 23 300 300 HOH HOH B . E 4 HOH 24 301 301 HOH HOH B . E 4 HOH 25 302 302 HOH HOH B . E 4 HOH 26 303 303 HOH HOH B . E 4 HOH 27 304 304 HOH HOH B . E 4 HOH 28 305 305 HOH HOH B . E 4 HOH 29 306 306 HOH HOH B . E 4 HOH 30 307 307 HOH HOH B . E 4 HOH 31 308 308 HOH HOH B . E 4 HOH 32 309 309 HOH HOH B . E 4 HOH 33 310 310 HOH HOH B . E 4 HOH 34 311 311 HOH HOH B . E 4 HOH 35 312 312 HOH HOH B . E 4 HOH 36 313 313 HOH HOH B . E 4 HOH 37 314 314 HOH HOH B . E 4 HOH 38 315 315 HOH HOH B . E 4 HOH 39 316 316 HOH HOH B . E 4 HOH 40 317 317 HOH HOH B . E 4 HOH 41 318 318 HOH HOH B . E 4 HOH 42 319 319 HOH HOH B . E 4 HOH 43 320 320 HOH HOH B . E 4 HOH 44 321 321 HOH HOH B . E 4 HOH 45 322 322 HOH HOH B . E 4 HOH 46 323 323 HOH HOH B . E 4 HOH 47 324 324 HOH HOH B . E 4 HOH 48 325 325 HOH HOH B . E 4 HOH 49 326 326 HOH HOH B . E 4 HOH 50 327 327 HOH HOH B . E 4 HOH 51 328 328 HOH HOH B . E 4 HOH 52 329 329 HOH HOH B . E 4 HOH 53 330 330 HOH HOH B . E 4 HOH 54 331 331 HOH HOH B . E 4 HOH 55 332 332 HOH HOH B . E 4 HOH 56 333 333 HOH HOH B . E 4 HOH 57 334 334 HOH HOH B . E 4 HOH 58 335 335 HOH HOH B . E 4 HOH 59 336 336 HOH HOH B . E 4 HOH 60 337 337 HOH HOH B . E 4 HOH 61 338 338 HOH HOH B . E 4 HOH 62 339 339 HOH HOH B . E 4 HOH 63 340 340 HOH HOH B . E 4 HOH 64 341 341 HOH HOH B . E 4 HOH 65 342 342 HOH HOH B . E 4 HOH 66 343 343 HOH HOH B . E 4 HOH 67 344 344 HOH HOH B . E 4 HOH 68 345 345 HOH HOH B . E 4 HOH 69 346 346 HOH HOH B . E 4 HOH 70 347 347 HOH HOH B . E 4 HOH 71 348 348 HOH HOH B . E 4 HOH 72 349 349 HOH HOH B . E 4 HOH 73 350 350 HOH HOH B . E 4 HOH 74 351 351 HOH HOH B . E 4 HOH 75 352 352 HOH HOH B . E 4 HOH 76 353 353 HOH HOH B . E 4 HOH 77 354 354 HOH HOH B . E 4 HOH 78 355 355 HOH HOH B . E 4 HOH 79 356 356 HOH HOH B . E 4 HOH 80 357 357 HOH HOH B . E 4 HOH 81 358 358 HOH HOH B . E 4 HOH 82 359 359 HOH HOH B . E 4 HOH 83 360 360 HOH HOH B . E 4 HOH 84 361 361 HOH HOH B . E 4 HOH 85 362 362 HOH HOH B . E 4 HOH 86 363 363 HOH HOH B . E 4 HOH 87 364 364 HOH HOH B . E 4 HOH 88 365 365 HOH HOH B . E 4 HOH 89 366 366 HOH HOH B . E 4 HOH 90 367 367 HOH HOH B . E 4 HOH 91 368 368 HOH HOH B . E 4 HOH 92 369 369 HOH HOH B . E 4 HOH 93 370 370 HOH HOH B . E 4 HOH 94 371 371 HOH HOH B . E 4 HOH 95 372 372 HOH HOH B . E 4 HOH 96 373 373 HOH HOH B . E 4 HOH 97 374 374 HOH HOH B . E 4 HOH 98 375 375 HOH HOH B . E 4 HOH 99 376 376 HOH HOH B . E 4 HOH 100 377 377 HOH HOH B . E 4 HOH 101 378 378 HOH HOH B . E 4 HOH 102 379 379 HOH HOH B . E 4 HOH 103 380 380 HOH HOH B . E 4 HOH 104 381 381 HOH HOH B . E 4 HOH 105 382 382 HOH HOH B . E 4 HOH 106 383 383 HOH HOH B . E 4 HOH 107 384 384 HOH HOH B . E 4 HOH 108 385 385 HOH HOH B . E 4 HOH 109 386 386 HOH HOH B . F 4 HOH 1 181 181 HOH HOH I . F 4 HOH 2 203 203 HOH HOH I . F 4 HOH 3 236 236 HOH HOH I . F 4 HOH 4 238 238 HOH HOH I . F 4 HOH 5 249 249 HOH HOH I . F 4 HOH 6 301 301 HOH HOH I . F 4 HOH 7 333 333 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_000277 _pdbx_molecule_features.name 'N-[(benzyloxy)carbonyl]-L-alpha-aspartyl-L-alpha-glutamyl-N-[(1S)-1-(carboxymethyl)-3-chloro-2-oxopropyl]-L-valinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000277 _pdbx_molecule.asym_id C # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 16910 ? 1 MORE -88 ? 1 'SSA (A^2)' 19540 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 67.6500000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 96.1600000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 392 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-07-04 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2014-04-02 6 'Structure model' 1 5 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Structure summary' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Database references' 12 6 'Structure model' 'Derived calculations' 13 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' chem_comp_atom 2 6 'Structure model' chem_comp_bond 3 6 'Structure model' database_2 4 6 'Structure model' pdbx_initial_refinement_model 5 6 'Structure model' struct_conn 6 6 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_conn.pdbx_dist_value' 4 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 6 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 XSCALE 'data scaling' . ? 2 AMoRE phasing . ? 3 SHELXL-97 refinement . ? 4 XDS 'data reduction' . ? 5 # _pdbx_entry_details.entry_id 2DKO _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;THE UNBOUND INHIBITOR (CHAIN I) IS CARBOBENZOXY-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE. UPON REACTION WITH THE ENZYME CHLORINE DISSOCIATES AND THE INHIBITOR COVALENTLY BINDS TO THE SG CYS 163 A OF THE ENZYME FORMING A TETRAHEDRAL INTERMEDIATE. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 40 ? ? CG A ASP 40 ? ? OD2 A ASP 40 ? ? 127.79 118.30 9.49 0.90 N 2 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH1 A ARG 75 ? ? 126.32 120.30 6.02 0.50 N 3 1 NE A ARG 86 ? ? CZ A ARG 86 ? ? NH2 A ARG 86 ? ? 116.38 120.30 -3.92 0.50 N 4 1 NE A ARG 93 ? ? CZ A ARG 93 ? ? NH1 A ARG 93 ? ? 123.62 120.30 3.32 0.50 N 5 1 CB A MET 100 ? B CA A MET 100 ? ? C A MET 100 ? ? 123.86 110.40 13.46 2.00 N 6 1 CD A ARG 101 ? ? NE A ARG 101 ? ? CZ A ARG 101 ? ? 137.89 123.60 14.29 1.40 N 7 1 NE A ARG 144 ? ? CZ A ARG 144 ? ? NH2 A ARG 144 ? ? 116.43 120.30 -3.87 0.50 N 8 1 NE A ARG 147 ? ? CZ A ARG 147 ? ? NH1 A ARG 147 ? ? 123.59 120.30 3.29 0.50 N 9 1 CA B HIS 185 ? ? CB B HIS 185 ? ? CG B HIS 185 ? ? 134.55 113.60 20.95 1.70 N 10 1 CA B ILE 187 ? ? CB B ILE 187 ? B CG1 B ILE 187 ? B 125.87 111.00 14.87 1.90 N 11 1 CA B LEU 194 ? ? CB B LEU 194 ? A CG B LEU 194 ? A 131.15 115.30 15.85 2.30 N 12 1 CG B TYR 195 ? ? CD2 B TYR 195 ? ? CE2 B TYR 195 ? ? 116.48 121.30 -4.82 0.80 N 13 1 CG B TYR 197 ? ? CD2 B TYR 197 ? ? CE2 B TYR 197 ? ? 126.12 121.30 4.82 0.80 N 14 1 NE B ARG 207 ? ? CZ B ARG 207 ? ? NH1 B ARG 207 ? ? 123.84 120.30 3.54 0.50 N 15 1 CA B GLN 217 ? ? CB B GLN 217 ? A CG B GLN 217 ? A 130.59 113.40 17.19 2.20 N 16 1 CB B ASP 228 ? ? CG B ASP 228 ? ? OD1 B ASP 228 ? ? 124.52 118.30 6.22 0.90 N 17 1 CG B MET 233 ? ? SD B MET 233 ? ? CE B MET 233 ? ? 90.18 100.20 -10.02 1.60 N 18 1 NE B ARG 238 ? ? CZ B ARG 238 ? ? NH1 B ARG 238 ? ? 127.31 120.30 7.01 0.50 N 19 1 NE B ARG 241 ? ? CZ B ARG 241 ? ? NH1 B ARG 241 ? ? 123.34 120.30 3.04 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 64 ? ? -100.76 68.80 2 1 LYS B 229 ? ? -140.30 -28.74 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id I _pdbx_unobs_or_zero_occ_residues.auth_comp_id PHQ _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id PHQ _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0QE C1 C N N 1 0QE CL1 CL N N 2 0QE H H N N 3 0QE HA H N N 4 0QE HB H N N 5 ALA N N N N 6 ALA CA C N S 7 ALA C C N N 8 ALA O O N N 9 ALA CB C N N 10 ALA OXT O N N 11 ALA H H N N 12 ALA H2 H N N 13 ALA HA H N N 14 ALA HB1 H N N 15 ALA HB2 H N N 16 ALA HB3 H N N 17 ALA HXT H N N 18 ARG N N N N 19 ARG CA C N S 20 ARG C C N N 21 ARG O O N N 22 ARG CB C N N 23 ARG CG C N N 24 ARG CD C N N 25 ARG NE N N N 26 ARG CZ C N N 27 ARG NH1 N N N 28 ARG NH2 N N N 29 ARG OXT O N N 30 ARG H H N N 31 ARG H2 H N N 32 ARG HA H N N 33 ARG HB2 H N N 34 ARG HB3 H N N 35 ARG HG2 H N N 36 ARG HG3 H N N 37 ARG HD2 H N N 38 ARG HD3 H N N 39 ARG HE H N N 40 ARG HH11 H N N 41 ARG HH12 H N N 42 ARG HH21 H N N 43 ARG HH22 H N N 44 ARG HXT H N N 45 ASN N N N N 46 ASN CA C N S 47 ASN C C N N 48 ASN O O N N 49 ASN CB C N N 50 ASN CG C N N 51 ASN OD1 O N N 52 ASN ND2 N N N 53 ASN OXT O N N 54 ASN H H N N 55 ASN H2 H N N 56 ASN HA H N N 57 ASN HB2 H N N 58 ASN HB3 H N N 59 ASN HD21 H N N 60 ASN HD22 H N N 61 ASN HXT H N N 62 ASP N N N N 63 ASP CA C N S 64 ASP C C N N 65 ASP O O N N 66 ASP CB C N N 67 ASP CG C N N 68 ASP OD1 O N N 69 ASP OD2 O N N 70 ASP OXT O N N 71 ASP H H N N 72 ASP H2 H N N 73 ASP HA H N N 74 ASP HB2 H N N 75 ASP HB3 H N N 76 ASP HD2 H N N 77 ASP HXT H N N 78 CYS N N N N 79 CYS CA C N R 80 CYS C C N N 81 CYS O O N N 82 CYS CB C N N 83 CYS SG S N N 84 CYS OXT O N N 85 CYS H H N N 86 CYS H2 H N N 87 CYS HA H N N 88 CYS HB2 H N N 89 CYS HB3 H N N 90 CYS HG H N N 91 CYS HXT H N N 92 GLN N N N N 93 GLN CA C N S 94 GLN C C N N 95 GLN O O N N 96 GLN CB C N N 97 GLN CG C N N 98 GLN CD C N N 99 GLN OE1 O N N 100 GLN NE2 N N N 101 GLN OXT O N N 102 GLN H H N N 103 GLN H2 H N N 104 GLN HA H N N 105 GLN HB2 H N N 106 GLN HB3 H N N 107 GLN HG2 H N N 108 GLN HG3 H N N 109 GLN HE21 H N N 110 GLN HE22 H N N 111 GLN HXT H N N 112 GLU N N N N 113 GLU CA C N S 114 GLU C C N N 115 GLU O O N N 116 GLU CB C N N 117 GLU CG C N N 118 GLU CD C N N 119 GLU OE1 O N N 120 GLU OE2 O N N 121 GLU OXT O N N 122 GLU H H N N 123 GLU H2 H N N 124 GLU HA H N N 125 GLU HB2 H N N 126 GLU HB3 H N N 127 GLU HG2 H N N 128 GLU HG3 H N N 129 GLU HE2 H N N 130 GLU HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 HIS N N N N 142 HIS CA C N S 143 HIS C C N N 144 HIS O O N N 145 HIS CB C N N 146 HIS CG C Y N 147 HIS ND1 N Y N 148 HIS CD2 C Y N 149 HIS CE1 C Y N 150 HIS NE2 N Y N 151 HIS OXT O N N 152 HIS H H N N 153 HIS H2 H N N 154 HIS HA H N N 155 HIS HB2 H N N 156 HIS HB3 H N N 157 HIS HD1 H N N 158 HIS HD2 H N N 159 HIS HE1 H N N 160 HIS HE2 H N N 161 HIS HXT H N N 162 HOH O O N N 163 HOH H1 H N N 164 HOH H2 H N N 165 ILE N N N N 166 ILE CA C N S 167 ILE C C N N 168 ILE O O N N 169 ILE CB C N S 170 ILE CG1 C N N 171 ILE CG2 C N N 172 ILE CD1 C N N 173 ILE OXT O N N 174 ILE H H N N 175 ILE H2 H N N 176 ILE HA H N N 177 ILE HB H N N 178 ILE HG12 H N N 179 ILE HG13 H N N 180 ILE HG21 H N N 181 ILE HG22 H N N 182 ILE HG23 H N N 183 ILE HD11 H N N 184 ILE HD12 H N N 185 ILE HD13 H N N 186 ILE HXT H N N 187 LEU N N N N 188 LEU CA C N S 189 LEU C C N N 190 LEU O O N N 191 LEU CB C N N 192 LEU CG C N N 193 LEU CD1 C N N 194 LEU CD2 C N N 195 LEU OXT O N N 196 LEU H H N N 197 LEU H2 H N N 198 LEU HA H N N 199 LEU HB2 H N N 200 LEU HB3 H N N 201 LEU HG H N N 202 LEU HD11 H N N 203 LEU HD12 H N N 204 LEU HD13 H N N 205 LEU HD21 H N N 206 LEU HD22 H N N 207 LEU HD23 H N N 208 LEU HXT H N N 209 LYS N N N N 210 LYS CA C N S 211 LYS C C N N 212 LYS O O N N 213 LYS CB C N N 214 LYS CG C N N 215 LYS CD C N N 216 LYS CE C N N 217 LYS NZ N N N 218 LYS OXT O N N 219 LYS H H N N 220 LYS H2 H N N 221 LYS HA H N N 222 LYS HB2 H N N 223 LYS HB3 H N N 224 LYS HG2 H N N 225 LYS HG3 H N N 226 LYS HD2 H N N 227 LYS HD3 H N N 228 LYS HE2 H N N 229 LYS HE3 H N N 230 LYS HZ1 H N N 231 LYS HZ2 H N N 232 LYS HZ3 H N N 233 LYS HXT H N N 234 MET N N N N 235 MET CA C N S 236 MET C C N N 237 MET O O N N 238 MET CB C N N 239 MET CG C N N 240 MET SD S N N 241 MET CE C N N 242 MET OXT O N N 243 MET H H N N 244 MET H2 H N N 245 MET HA H N N 246 MET HB2 H N N 247 MET HB3 H N N 248 MET HG2 H N N 249 MET HG3 H N N 250 MET HE1 H N N 251 MET HE2 H N N 252 MET HE3 H N N 253 MET HXT H N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PHQ C1 C N N 278 PHQ O1 O N N 279 PHQ O2 O N N 280 PHQ C2 C N N 281 PHQ C3 C Y N 282 PHQ C4 C Y N 283 PHQ C5 C Y N 284 PHQ C6 C Y N 285 PHQ C7 C Y N 286 PHQ C8 C Y N 287 PHQ CL1 CL N N 288 PHQ H21 H N N 289 PHQ H22 H N N 290 PHQ H41 H N N 291 PHQ H51 H N N 292 PHQ H61 H N N 293 PHQ H71 H N N 294 PHQ H81 H N N 295 PRO N N N N 296 PRO CA C N S 297 PRO C C N N 298 PRO O O N N 299 PRO CB C N N 300 PRO CG C N N 301 PRO CD C N N 302 PRO OXT O N N 303 PRO H H N N 304 PRO HA H N N 305 PRO HB2 H N N 306 PRO HB3 H N N 307 PRO HG2 H N N 308 PRO HG3 H N N 309 PRO HD2 H N N 310 PRO HD3 H N N 311 PRO HXT H N N 312 SER N N N N 313 SER CA C N S 314 SER C C N N 315 SER O O N N 316 SER CB C N N 317 SER OG O N N 318 SER OXT O N N 319 SER H H N N 320 SER H2 H N N 321 SER HA H N N 322 SER HB2 H N N 323 SER HB3 H N N 324 SER HG H N N 325 SER HXT H N N 326 THR N N N N 327 THR CA C N S 328 THR C C N N 329 THR O O N N 330 THR CB C N R 331 THR OG1 O N N 332 THR CG2 C N N 333 THR OXT O N N 334 THR H H N N 335 THR H2 H N N 336 THR HA H N N 337 THR HB H N N 338 THR HG1 H N N 339 THR HG21 H N N 340 THR HG22 H N N 341 THR HG23 H N N 342 THR HXT H N N 343 TRP N N N N 344 TRP CA C N S 345 TRP C C N N 346 TRP O O N N 347 TRP CB C N N 348 TRP CG C Y N 349 TRP CD1 C Y N 350 TRP CD2 C Y N 351 TRP NE1 N Y N 352 TRP CE2 C Y N 353 TRP CE3 C Y N 354 TRP CZ2 C Y N 355 TRP CZ3 C Y N 356 TRP CH2 C Y N 357 TRP OXT O N N 358 TRP H H N N 359 TRP H2 H N N 360 TRP HA H N N 361 TRP HB2 H N N 362 TRP HB3 H N N 363 TRP HD1 H N N 364 TRP HE1 H N N 365 TRP HE3 H N N 366 TRP HZ2 H N N 367 TRP HZ3 H N N 368 TRP HH2 H N N 369 TRP HXT H N N 370 TYR N N N N 371 TYR CA C N S 372 TYR C C N N 373 TYR O O N N 374 TYR CB C N N 375 TYR CG C Y N 376 TYR CD1 C Y N 377 TYR CD2 C Y N 378 TYR CE1 C Y N 379 TYR CE2 C Y N 380 TYR CZ C Y N 381 TYR OH O N N 382 TYR OXT O N N 383 TYR H H N N 384 TYR H2 H N N 385 TYR HA H N N 386 TYR HB2 H N N 387 TYR HB3 H N N 388 TYR HD1 H N N 389 TYR HD2 H N N 390 TYR HE1 H N N 391 TYR HE2 H N N 392 TYR HH H N N 393 TYR HXT H N N 394 VAL N N N N 395 VAL CA C N S 396 VAL C C N N 397 VAL O O N N 398 VAL CB C N N 399 VAL CG1 C N N 400 VAL CG2 C N N 401 VAL OXT O N N 402 VAL H H N N 403 VAL H2 H N N 404 VAL HA H N N 405 VAL HB H N N 406 VAL HG11 H N N 407 VAL HG12 H N N 408 VAL HG13 H N N 409 VAL HG21 H N N 410 VAL HG22 H N N 411 VAL HG23 H N N 412 VAL HXT H N N 413 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0QE C1 CL1 sing N N 1 0QE C1 H sing N N 2 0QE C1 HA sing N N 3 0QE C1 HB sing N N 4 ALA N CA sing N N 5 ALA N H sing N N 6 ALA N H2 sing N N 7 ALA CA C sing N N 8 ALA CA CB sing N N 9 ALA CA HA sing N N 10 ALA C O doub N N 11 ALA C OXT sing N N 12 ALA CB HB1 sing N N 13 ALA CB HB2 sing N N 14 ALA CB HB3 sing N N 15 ALA OXT HXT sing N N 16 ARG N CA sing N N 17 ARG N H sing N N 18 ARG N H2 sing N N 19 ARG CA C sing N N 20 ARG CA CB sing N N 21 ARG CA HA sing N N 22 ARG C O doub N N 23 ARG C OXT sing N N 24 ARG CB CG sing N N 25 ARG CB HB2 sing N N 26 ARG CB HB3 sing N N 27 ARG CG CD sing N N 28 ARG CG HG2 sing N N 29 ARG CG HG3 sing N N 30 ARG CD NE sing N N 31 ARG CD HD2 sing N N 32 ARG CD HD3 sing N N 33 ARG NE CZ sing N N 34 ARG NE HE sing N N 35 ARG CZ NH1 sing N N 36 ARG CZ NH2 doub N N 37 ARG NH1 HH11 sing N N 38 ARG NH1 HH12 sing N N 39 ARG NH2 HH21 sing N N 40 ARG NH2 HH22 sing N N 41 ARG OXT HXT sing N N 42 ASN N CA sing N N 43 ASN N H sing N N 44 ASN N H2 sing N N 45 ASN CA C sing N N 46 ASN CA CB sing N N 47 ASN CA HA sing N N 48 ASN C O doub N N 49 ASN C OXT sing N N 50 ASN CB CG sing N N 51 ASN CB HB2 sing N N 52 ASN CB HB3 sing N N 53 ASN CG OD1 doub N N 54 ASN CG ND2 sing N N 55 ASN ND2 HD21 sing N N 56 ASN ND2 HD22 sing N N 57 ASN OXT HXT sing N N 58 ASP N CA sing N N 59 ASP N H sing N N 60 ASP N H2 sing N N 61 ASP CA C sing N N 62 ASP CA CB sing N N 63 ASP CA HA sing N N 64 ASP C O doub N N 65 ASP C OXT sing N N 66 ASP CB CG sing N N 67 ASP CB HB2 sing N N 68 ASP CB HB3 sing N N 69 ASP CG OD1 doub N N 70 ASP CG OD2 sing N N 71 ASP OD2 HD2 sing N N 72 ASP OXT HXT sing N N 73 CYS N CA sing N N 74 CYS N H sing N N 75 CYS N H2 sing N N 76 CYS CA C sing N N 77 CYS CA CB sing N N 78 CYS CA HA sing N N 79 CYS C O doub N N 80 CYS C OXT sing N N 81 CYS CB SG sing N N 82 CYS CB HB2 sing N N 83 CYS CB HB3 sing N N 84 CYS SG HG sing N N 85 CYS OXT HXT sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PHQ C1 O1 doub N N 264 PHQ C1 O2 sing N N 265 PHQ C1 CL1 sing N N 266 PHQ O2 C2 sing N N 267 PHQ C2 C3 sing N N 268 PHQ C2 H21 sing N N 269 PHQ C2 H22 sing N N 270 PHQ C3 C4 doub Y N 271 PHQ C3 C8 sing Y N 272 PHQ C4 C5 sing Y N 273 PHQ C4 H41 sing N N 274 PHQ C5 C6 doub Y N 275 PHQ C5 H51 sing N N 276 PHQ C6 C7 sing Y N 277 PHQ C6 H61 sing N N 278 PHQ C7 C8 doub Y N 279 PHQ C7 H71 sing N N 280 PHQ C8 H81 sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 THR N CA sing N N 312 THR N H sing N N 313 THR N H2 sing N N 314 THR CA C sing N N 315 THR CA CB sing N N 316 THR CA HA sing N N 317 THR C O doub N N 318 THR C OXT sing N N 319 THR CB OG1 sing N N 320 THR CB CG2 sing N N 321 THR CB HB sing N N 322 THR OG1 HG1 sing N N 323 THR CG2 HG21 sing N N 324 THR CG2 HG22 sing N N 325 THR CG2 HG23 sing N N 326 THR OXT HXT sing N N 327 TRP N CA sing N N 328 TRP N H sing N N 329 TRP N H2 sing N N 330 TRP CA C sing N N 331 TRP CA CB sing N N 332 TRP CA HA sing N N 333 TRP C O doub N N 334 TRP C OXT sing N N 335 TRP CB CG sing N N 336 TRP CB HB2 sing N N 337 TRP CB HB3 sing N N 338 TRP CG CD1 doub Y N 339 TRP CG CD2 sing Y N 340 TRP CD1 NE1 sing Y N 341 TRP CD1 HD1 sing N N 342 TRP CD2 CE2 doub Y N 343 TRP CD2 CE3 sing Y N 344 TRP NE1 CE2 sing Y N 345 TRP NE1 HE1 sing N N 346 TRP CE2 CZ2 sing Y N 347 TRP CE3 CZ3 doub Y N 348 TRP CE3 HE3 sing N N 349 TRP CZ2 CH2 doub Y N 350 TRP CZ2 HZ2 sing N N 351 TRP CZ3 CH2 sing Y N 352 TRP CZ3 HZ3 sing N N 353 TRP CH2 HH2 sing N N 354 TRP OXT HXT sing N N 355 TYR N CA sing N N 356 TYR N H sing N N 357 TYR N H2 sing N N 358 TYR CA C sing N N 359 TYR CA CB sing N N 360 TYR CA HA sing N N 361 TYR C O doub N N 362 TYR C OXT sing N N 363 TYR CB CG sing N N 364 TYR CB HB2 sing N N 365 TYR CB HB3 sing N N 366 TYR CG CD1 doub Y N 367 TYR CG CD2 sing Y N 368 TYR CD1 CE1 sing Y N 369 TYR CD1 HD1 sing N N 370 TYR CD2 CE2 doub Y N 371 TYR CD2 HD2 sing N N 372 TYR CE1 CZ doub Y N 373 TYR CE1 HE1 sing N N 374 TYR CE2 CZ sing Y N 375 TYR CE2 HE2 sing N N 376 TYR CZ OH sing N N 377 TYR OH HH sing N N 378 TYR OXT HXT sing N N 379 VAL N CA sing N N 380 VAL N H sing N N 381 VAL N H2 sing N N 382 VAL CA C sing N N 383 VAL CA CB sing N N 384 VAL CA HA sing N N 385 VAL C O doub N N 386 VAL C OXT sing N N 387 VAL CB CG1 sing N N 388 VAL CB CG2 sing N N 389 VAL CB HB sing N N 390 VAL CG1 HG11 sing N N 391 VAL CG1 HG12 sing N N 392 VAL CG1 HG13 sing N N 393 VAL CG2 HG21 sing N N 394 VAL CG2 HG22 sing N N 395 VAL CG2 HG23 sing N N 396 VAL OXT HXT sing N N 397 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1CP3 _pdbx_initial_refinement_model.details ? #