HEADER GENE REGULATION 14-APR-06 2DKW TITLE SOLUTION STRUCTURE OF THE BROMODOMAIN OF HUMAN PROTEIN KIAA1240 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN KIAA1240; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMODOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA1240; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050627-27; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS BROMODOMAIN-LIKE, FIVE-HELIX, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, GENE REGULATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.SANO,F.HAYASHI,C.KUROSAKI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DKW 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DKW 1 VERSN REVDAT 1 14-OCT-06 2DKW 0 JRNL AUTH R.SANO,F.HAYASHI,C.KUROSAKI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE BROMODOMAIN OF HUMAN PROTEIN JRNL TITL 2 KIAA1240 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DKW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025536. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.15MM 13C, 15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9742, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LOWEST ENERGY,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 109.52 -44.28 REMARK 500 1 PHE A 16 -71.49 -50.37 REMARK 500 1 PHE A 30 44.01 -108.60 REMARK 500 1 GLU A 42 32.49 -97.46 REMARK 500 1 LEU A 112 104.30 -44.21 REMARK 500 1 SER A 129 136.60 -35.78 REMARK 500 2 SER A 2 144.94 -38.43 REMARK 500 2 SER A 3 142.58 -173.16 REMARK 500 2 SER A 6 -178.14 -174.16 REMARK 500 2 PHE A 16 -74.32 -57.70 REMARK 500 2 LYS A 28 47.96 -76.38 REMARK 500 2 ARG A 29 -51.42 -124.69 REMARK 500 2 PHE A 30 40.53 -109.56 REMARK 500 2 PRO A 36 81.43 -69.75 REMARK 500 2 SER A 38 -175.73 -51.38 REMARK 500 2 GLU A 46 74.17 -112.56 REMARK 500 2 LEU A 50 -28.13 -38.56 REMARK 500 2 LYS A 59 35.63 -83.73 REMARK 500 2 HIS A 60 40.87 34.57 REMARK 500 2 LYS A 70 -37.39 -36.99 REMARK 500 2 ASN A 83 96.22 -32.90 REMARK 500 2 LEU A 112 120.05 -39.79 REMARK 500 2 SER A 130 -52.74 -130.22 REMARK 500 3 SER A 3 89.32 -69.94 REMARK 500 3 SER A 5 145.16 -172.12 REMARK 500 3 SER A 6 50.25 -104.37 REMARK 500 3 PRO A 36 80.21 -69.74 REMARK 500 3 GLU A 46 78.41 -112.32 REMARK 500 3 SER A 51 -73.86 -56.61 REMARK 500 3 ASN A 61 -60.14 -93.45 REMARK 500 3 PRO A 84 -164.77 -69.71 REMARK 500 3 ARG A 94 -37.30 -38.14 REMARK 500 3 CYS A 98 -39.09 -37.68 REMARK 500 4 PHE A 16 -74.90 -51.55 REMARK 500 4 ASP A 19 -39.89 -36.10 REMARK 500 4 VAL A 20 -71.05 -58.74 REMARK 500 4 PRO A 36 100.00 -69.80 REMARK 500 4 VAL A 37 39.01 -85.96 REMARK 500 4 HIS A 60 48.50 34.78 REMARK 500 4 ILE A 93 -73.06 -44.25 REMARK 500 4 LEU A 119 -61.15 -94.95 REMARK 500 4 PRO A 128 87.52 -69.75 REMARK 500 5 SER A 2 41.15 -85.73 REMARK 500 5 SER A 5 127.76 -34.90 REMARK 500 5 GLU A 42 42.39 -79.48 REMARK 500 5 GLU A 46 74.27 -112.17 REMARK 500 5 ALA A 79 -74.14 -67.76 REMARK 500 5 PRO A 84 -175.92 -69.76 REMARK 500 5 LYS A 86 70.27 -104.41 REMARK 500 5 GLU A 111 -70.03 -56.04 REMARK 500 REMARK 500 THIS ENTRY HAS 182 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002101214.1 RELATED DB: TARGETDB DBREF 2DKW A 8 125 UNP Q9ULI0 K1240_HUMAN 238 355 SEQADV 2DKW GLY A 1 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 2 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 3 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW GLY A 4 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 5 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 6 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW GLY A 7 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 126 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW GLY A 127 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW PRO A 128 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 129 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW SER A 130 UNP Q9ULI0 CLONING ARTIFACT SEQADV 2DKW GLY A 131 UNP Q9ULI0 CLONING ARTIFACT SEQRES 1 A 131 GLY SER SER GLY SER SER GLY ASN THR LEU ARG GLU LEU SEQRES 2 A 131 ARG LEU PHE LEU ARG ASP VAL THR LYS ARG LEU ALA THR SEQRES 3 A 131 ASP LYS ARG PHE ASN ILE PHE SER LYS PRO VAL SER ASP SEQRES 4 A 131 TYR LEU GLU VAL ILE LYS GLU PRO MET ASP LEU SER THR SEQRES 5 A 131 VAL ILE THR LYS ILE ASP LYS HIS ASN TYR LEU THR ALA SEQRES 6 A 131 LYS ASP PHE LEU LYS ASP ILE ASP LEU ILE CYS SER ASN SEQRES 7 A 131 ALA LEU GLU TYR ASN PRO ASP LYS ASP PRO GLY ASP LYS SEQRES 8 A 131 ILE ILE ARG HIS ARG ALA CYS THR LEU LYS ASP THR ALA SEQRES 9 A 131 HIS ALA ILE ILE ALA ALA GLU LEU ASP PRO GLU PHE ASN SEQRES 10 A 131 LYS LEU CYS GLU GLU ILE LYS GLU SER GLY PRO SER SER SEQRES 11 A 131 GLY HELIX 1 1 GLY A 7 ASP A 27 1 21 HELIX 2 2 LYS A 28 ASN A 31 5 4 HELIX 3 3 ASP A 49 LYS A 59 1 11 HELIX 4 4 ALA A 65 TYR A 82 1 18 HELIX 5 5 GLY A 89 LEU A 112 1 24 HELIX 6 6 PHE A 116 GLU A 125 1 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1