data_2DLC # _entry.id 2DLC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DLC pdb_00002dlc 10.2210/pdb2dlc/pdb NDB PR0198 ? ? RCSB RCSB025551 ? ? WWPDB D_1000025551 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-12 2 'Structure model' 1 1 2008-04-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-07-12 5 'Structure model' 1 4 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 5 'Structure model' chem_comp 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.country' 2 4 'Structure model' '_citation.journal_abbrev' 3 4 'Structure model' '_citation.journal_id_ASTM' 4 4 'Structure model' '_citation.journal_id_CSD' 5 4 'Structure model' '_citation.journal_id_ISSN' 6 4 'Structure model' '_citation.journal_volume' 7 4 'Structure model' '_citation.page_first' 8 4 'Structure model' '_citation.page_last' 9 4 'Structure model' '_citation.pdbx_database_id_DOI' 10 4 'Structure model' '_citation.pdbx_database_id_PubMed' 11 4 'Structure model' '_citation.title' 12 4 'Structure model' '_citation.year' 13 5 'Structure model' '_chem_comp.pdbx_synonyms' 14 5 'Structure model' '_database_2.pdbx_DOI' 15 5 'Structure model' '_database_2.pdbx_database_accession' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.value' 29 5 'Structure model' '_struct_conn.conn_type_id' 30 5 'Structure model' '_struct_conn.id' 31 5 'Structure model' '_struct_conn.pdbx_dist_value' 32 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 33 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 34 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 35 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 37 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 38 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 39 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 40 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 41 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 42 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 43 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 44 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 45 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 46 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 47 5 'Structure model' '_struct_ref_seq_dif.details' 48 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 49 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 50 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DLC _pdbx_database_status.recvd_initial_deposition_date 2006-04-18 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tsunoda, M.' 1 'Kusakabe, Y.' 2 'Tanaka, N.' 3 'Nakamura, K.T.' 4 # _citation.id primary _citation.title 'Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 35 _citation.page_first 4289 _citation.page_last 4300 _citation.year 2007 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 1362-4962 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17576676 _citation.pdbx_database_id_DOI 10.1093/nar/gkm417 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsunoda, M.' 1 ? primary 'Kusakabe, Y.' 2 ? primary 'Tanaka, N.' 3 ? primary 'Ohno, S.' 4 ? primary 'Nakamura, M.' 5 ? primary 'Senda, T.' 6 ? primary 'Moriguchi, T.' 7 ? primary 'Asai, N.' 8 ? primary 'Sekine, M.' 9 ? primary 'Yokogawa, T.' 10 ? primary 'Nishikawa, K.' 11 ? primary 'Nakamura, K.T.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'T-RNA (76-MER)' 24717.949 1 ? ? ? ? 2 polymer man 'Tyrosyl-tRNA synthetase, cytoplasmic' 44076.855 1 6.1.1.1 ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn "O-(ADENOSINE-5'-O-YL)-N-(L-TYROSYL)PHOSPHORAMIDATE" 509.410 1 ? ? ? ? 5 water nat water 18.015 57 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Tyrosyl-tRNA ligase, TyrRS' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes ;CUCUCGGUA(2MG)CCAAGU(H2U)(OMG)GGAAGGC(M2G)CAAGACUG(PSU)A(6IA)A(PSU)CUUGAGGU(5MC) GGGCG(5MU)(PSU)CG(1MA)CUCGCCCCCGGGAGACCA ; CUCUCGGUAGCCAAGUUGGGAAGGCGCAAGACUGUAAAUCUUGAGGUCGGGCGUUCGACUCGCCCCCGGGAGACCA Y ? 2 'polypeptide(L)' no no ;MSSAATVDPNEAFGLITKNLQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRPHCGYFVPMTKLADFLKAGCEVTVLLADL HAFLDNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLTPDYTMDIFRLSNIVSQNDAKRAGADVVKQV ANPLLSGLIYPLMQALDEQFLDVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNSKIDLL EEPKQVKKKINSAFCSPGNVEENGLLSFVQYVIAPIQELKFGTNHFEFFIDRPEKFGGPITYKSFEEMKLAFKEEKLSPP DLKIGVADAINELLEPIRQEFANNKEFQEASEKGYPVATPQKSKKAKKPKNKGTKYPGATKTNEIATKLEETKL ; ;MSSAATVDPNEAFGLITKNLQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRPHCGYFVPMTKLADFLKAGCEVTVLLADL HAFLDNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLTPDYTMDIFRLSNIVSQNDAKRAGADVVKQV ANPLLSGLIYPLMQALDEQFLDVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNSKIDLL EEPKQVKKKINSAFCSPGNVEENGLLSFVQYVIAPIQELKFGTNHFEFFIDRPEKFGGPITYKSFEEMKLAFKEEKLSPP DLKIGVADAINELLEPIRQEFANNKEFQEASEKGYPVATPQKSKKAKKPKNKGTKYPGATKTNEIATKLEETKL ; X ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 "O-(ADENOSINE-5'-O-YL)-N-(L-TYROSYL)PHOSPHORAMIDATE" YMP 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 U n 1 3 C n 1 4 U n 1 5 C n 1 6 G n 1 7 G n 1 8 U n 1 9 A n 1 10 2MG n 1 11 C n 1 12 C n 1 13 A n 1 14 A n 1 15 G n 1 16 U n 1 17 H2U n 1 18 OMG n 1 19 G n 1 20 G n 1 21 A n 1 22 A n 1 23 G n 1 24 G n 1 25 C n 1 26 M2G n 1 27 C n 1 28 A n 1 29 A n 1 30 G n 1 31 A n 1 32 C n 1 33 U n 1 34 G n 1 35 PSU n 1 36 A n 1 37 6IA n 1 38 A n 1 39 PSU n 1 40 C n 1 41 U n 1 42 U n 1 43 G n 1 44 A n 1 45 G n 1 46 G n 1 47 U n 1 48 5MC n 1 49 G n 1 50 G n 1 51 G n 1 52 C n 1 53 G n 1 54 5MU n 1 55 PSU n 1 56 C n 1 57 G n 1 58 1MA n 1 59 C n 1 60 U n 1 61 C n 1 62 G n 1 63 C n 1 64 C n 1 65 C n 1 66 C n 1 67 C n 1 68 G n 1 69 G n 1 70 G n 1 71 A n 1 72 G n 1 73 A n 1 74 C n 1 75 C n 1 76 A n 2 1 MET n 2 2 SER n 2 3 SER n 2 4 ALA n 2 5 ALA n 2 6 THR n 2 7 VAL n 2 8 ASP n 2 9 PRO n 2 10 ASN n 2 11 GLU n 2 12 ALA n 2 13 PHE n 2 14 GLY n 2 15 LEU n 2 16 ILE n 2 17 THR n 2 18 LYS n 2 19 ASN n 2 20 LEU n 2 21 GLN n 2 22 GLU n 2 23 VAL n 2 24 LEU n 2 25 ASN n 2 26 PRO n 2 27 GLN n 2 28 ILE n 2 29 ILE n 2 30 LYS n 2 31 ASP n 2 32 VAL n 2 33 LEU n 2 34 GLU n 2 35 VAL n 2 36 GLN n 2 37 LYS n 2 38 ARG n 2 39 HIS n 2 40 LEU n 2 41 LYS n 2 42 LEU n 2 43 TYR n 2 44 TRP n 2 45 GLY n 2 46 THR n 2 47 ALA n 2 48 PRO n 2 49 THR n 2 50 GLY n 2 51 ARG n 2 52 PRO n 2 53 HIS n 2 54 CYS n 2 55 GLY n 2 56 TYR n 2 57 PHE n 2 58 VAL n 2 59 PRO n 2 60 MET n 2 61 THR n 2 62 LYS n 2 63 LEU n 2 64 ALA n 2 65 ASP n 2 66 PHE n 2 67 LEU n 2 68 LYS n 2 69 ALA n 2 70 GLY n 2 71 CYS n 2 72 GLU n 2 73 VAL n 2 74 THR n 2 75 VAL n 2 76 LEU n 2 77 LEU n 2 78 ALA n 2 79 ASP n 2 80 LEU n 2 81 HIS n 2 82 ALA n 2 83 PHE n 2 84 LEU n 2 85 ASP n 2 86 ASN n 2 87 MET n 2 88 LYS n 2 89 ALA n 2 90 PRO n 2 91 LEU n 2 92 GLU n 2 93 VAL n 2 94 VAL n 2 95 ASN n 2 96 TYR n 2 97 ARG n 2 98 ALA n 2 99 LYS n 2 100 TYR n 2 101 TYR n 2 102 GLU n 2 103 LEU n 2 104 THR n 2 105 ILE n 2 106 LYS n 2 107 ALA n 2 108 ILE n 2 109 LEU n 2 110 ARG n 2 111 SER n 2 112 ILE n 2 113 ASN n 2 114 VAL n 2 115 PRO n 2 116 ILE n 2 117 GLU n 2 118 LYS n 2 119 LEU n 2 120 LYS n 2 121 PHE n 2 122 VAL n 2 123 VAL n 2 124 GLY n 2 125 SER n 2 126 SER n 2 127 TYR n 2 128 GLN n 2 129 LEU n 2 130 THR n 2 131 PRO n 2 132 ASP n 2 133 TYR n 2 134 THR n 2 135 MET n 2 136 ASP n 2 137 ILE n 2 138 PHE n 2 139 ARG n 2 140 LEU n 2 141 SER n 2 142 ASN n 2 143 ILE n 2 144 VAL n 2 145 SER n 2 146 GLN n 2 147 ASN n 2 148 ASP n 2 149 ALA n 2 150 LYS n 2 151 ARG n 2 152 ALA n 2 153 GLY n 2 154 ALA n 2 155 ASP n 2 156 VAL n 2 157 VAL n 2 158 LYS n 2 159 GLN n 2 160 VAL n 2 161 ALA n 2 162 ASN n 2 163 PRO n 2 164 LEU n 2 165 LEU n 2 166 SER n 2 167 GLY n 2 168 LEU n 2 169 ILE n 2 170 TYR n 2 171 PRO n 2 172 LEU n 2 173 MET n 2 174 GLN n 2 175 ALA n 2 176 LEU n 2 177 ASP n 2 178 GLU n 2 179 GLN n 2 180 PHE n 2 181 LEU n 2 182 ASP n 2 183 VAL n 2 184 ASP n 2 185 CYS n 2 186 GLN n 2 187 PHE n 2 188 GLY n 2 189 GLY n 2 190 VAL n 2 191 ASP n 2 192 GLN n 2 193 ARG n 2 194 LYS n 2 195 ILE n 2 196 PHE n 2 197 VAL n 2 198 LEU n 2 199 ALA n 2 200 GLU n 2 201 GLU n 2 202 ASN n 2 203 LEU n 2 204 PRO n 2 205 SER n 2 206 LEU n 2 207 GLY n 2 208 TYR n 2 209 LYS n 2 210 LYS n 2 211 ARG n 2 212 ALA n 2 213 HIS n 2 214 LEU n 2 215 MET n 2 216 ASN n 2 217 PRO n 2 218 MET n 2 219 VAL n 2 220 PRO n 2 221 GLY n 2 222 LEU n 2 223 ALA n 2 224 GLN n 2 225 GLY n 2 226 GLY n 2 227 LYS n 2 228 MET n 2 229 SER n 2 230 ALA n 2 231 SER n 2 232 ASP n 2 233 PRO n 2 234 ASN n 2 235 SER n 2 236 LYS n 2 237 ILE n 2 238 ASP n 2 239 LEU n 2 240 LEU n 2 241 GLU n 2 242 GLU n 2 243 PRO n 2 244 LYS n 2 245 GLN n 2 246 VAL n 2 247 LYS n 2 248 LYS n 2 249 LYS n 2 250 ILE n 2 251 ASN n 2 252 SER n 2 253 ALA n 2 254 PHE n 2 255 CYS n 2 256 SER n 2 257 PRO n 2 258 GLY n 2 259 ASN n 2 260 VAL n 2 261 GLU n 2 262 GLU n 2 263 ASN n 2 264 GLY n 2 265 LEU n 2 266 LEU n 2 267 SER n 2 268 PHE n 2 269 VAL n 2 270 GLN n 2 271 TYR n 2 272 VAL n 2 273 ILE n 2 274 ALA n 2 275 PRO n 2 276 ILE n 2 277 GLN n 2 278 GLU n 2 279 LEU n 2 280 LYS n 2 281 PHE n 2 282 GLY n 2 283 THR n 2 284 ASN n 2 285 HIS n 2 286 PHE n 2 287 GLU n 2 288 PHE n 2 289 PHE n 2 290 ILE n 2 291 ASP n 2 292 ARG n 2 293 PRO n 2 294 GLU n 2 295 LYS n 2 296 PHE n 2 297 GLY n 2 298 GLY n 2 299 PRO n 2 300 ILE n 2 301 THR n 2 302 TYR n 2 303 LYS n 2 304 SER n 2 305 PHE n 2 306 GLU n 2 307 GLU n 2 308 MET n 2 309 LYS n 2 310 LEU n 2 311 ALA n 2 312 PHE n 2 313 LYS n 2 314 GLU n 2 315 GLU n 2 316 LYS n 2 317 LEU n 2 318 SER n 2 319 PRO n 2 320 PRO n 2 321 ASP n 2 322 LEU n 2 323 LYS n 2 324 ILE n 2 325 GLY n 2 326 VAL n 2 327 ALA n 2 328 ASP n 2 329 ALA n 2 330 ILE n 2 331 ASN n 2 332 GLU n 2 333 LEU n 2 334 LEU n 2 335 GLU n 2 336 PRO n 2 337 ILE n 2 338 ARG n 2 339 GLN n 2 340 GLU n 2 341 PHE n 2 342 ALA n 2 343 ASN n 2 344 ASN n 2 345 LYS n 2 346 GLU n 2 347 PHE n 2 348 GLN n 2 349 GLU n 2 350 ALA n 2 351 SER n 2 352 GLU n 2 353 LYS n 2 354 GLY n 2 355 TYR n 2 356 PRO n 2 357 VAL n 2 358 ALA n 2 359 THR n 2 360 PRO n 2 361 GLN n 2 362 LYS n 2 363 SER n 2 364 LYS n 2 365 LYS n 2 366 ALA n 2 367 LYS n 2 368 LYS n 2 369 PRO n 2 370 LYS n 2 371 ASN n 2 372 LYS n 2 373 GLY n 2 374 THR n 2 375 LYS n 2 376 TYR n 2 377 PRO n 2 378 GLY n 2 379 ALA n 2 380 THR n 2 381 LYS n 2 382 THR n 2 383 ASN n 2 384 GLU n 2 385 ILE n 2 386 ALA n 2 387 THR n 2 388 LYS n 2 389 LEU n 2 390 GLU n 2 391 GLU n 2 392 THR n 2 393 LYS n 2 394 LEU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1MA 'RNA linking' n "6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O7 P' 361.248 2MG 'RNA linking' n "2N-METHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O8 P' 377.247 5MC 'RNA linking' n "5-METHYLCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 5MU 'RNA linking' n ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 6IA 'RNA linking' n "N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE" ? 'C15 H24 N5 O7 P' 417.354 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 H2U 'RNA linking' n "5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE" ? 'C9 H15 N2 O9 P' 326.197 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M2G 'RNA linking' n "N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C12 H18 N5 O8 P' 391.274 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 OMG 'RNA linking' n "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O8 P' 377.247 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PSU 'RNA linking' n "PSEUDOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YMP non-polymer . "O-(ADENOSINE-5'-O-YL)-N-(L-TYROSYL)PHOSPHORAMIDATE" 'TYROSYL-ADENYLATE ANALOGUE; TYR-AMP ANALOGUE' 'C19 H24 N7 O8 P' 509.410 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 501 501 C C Y . n A 1 2 U 2 502 502 U U Y . n A 1 3 C 3 503 503 C C Y . n A 1 4 U 4 504 504 U U Y . n A 1 5 C 5 505 505 C C Y . n A 1 6 G 6 506 506 G G Y . n A 1 7 G 7 507 507 G G Y . n A 1 8 U 8 508 508 U U Y . n A 1 9 A 9 509 509 A A Y . n A 1 10 2MG 10 510 510 2MG 2MG Y . n A 1 11 C 11 511 511 C C Y . n A 1 12 C 12 512 512 C C Y . n A 1 13 A 13 513 513 A A Y . n A 1 14 A 14 514 514 A A Y . n A 1 15 G 15 515 515 G G Y . n A 1 16 U 16 516 516 U U Y . n A 1 17 H2U 17 517 ? ? ? Y . n A 1 18 OMG 18 518 518 OMG OMG Y . n A 1 19 G 19 519 519 G G Y . n A 1 20 G 20 520 520 G G Y . n A 1 21 A 21 521 521 A A Y . n A 1 22 A 22 522 522 A A Y . n A 1 23 G 23 523 523 G G Y . n A 1 24 G 24 524 524 G G Y . n A 1 25 C 25 525 525 C C Y . n A 1 26 M2G 26 526 526 M2G M2G Y . n A 1 27 C 27 527 527 C C Y . n A 1 28 A 28 528 528 A A Y . n A 1 29 A 29 529 529 A A Y . n A 1 30 G 30 530 530 G G Y . n A 1 31 A 31 531 531 A A Y . n A 1 32 C 32 532 ? ? ? Y . n A 1 33 U 33 533 533 U U Y . n A 1 34 G 34 534 534 G G Y . n A 1 35 PSU 35 535 535 PSU PSU Y . n A 1 36 A 36 536 536 A A Y . n A 1 37 6IA 37 537 537 6IA 6IA Y . n A 1 38 A 38 538 538 A A Y . n A 1 39 PSU 39 539 539 PSU PSU Y . n A 1 40 C 40 540 540 C C Y . n A 1 41 U 41 541 541 U U Y . n A 1 42 U 42 542 542 U U Y . n A 1 43 G 43 543 543 G G Y . n A 1 44 A 44 544 544 A A Y . n A 1 45 G 45 545 545 G G Y . n A 1 46 G 46 546 546 G G Y . n A 1 47 U 47 547 547 U U Y . n A 1 48 5MC 48 548 548 5MC 5MC Y . n A 1 49 G 49 549 549 G G Y . n A 1 50 G 50 550 550 G G Y . n A 1 51 G 51 551 551 G G Y . n A 1 52 C 52 552 552 C C Y . n A 1 53 G 53 553 553 G G Y . n A 1 54 5MU 54 554 554 5MU 5MU Y . n A 1 55 PSU 55 555 555 PSU PSU Y . n A 1 56 C 56 556 556 C C Y . n A 1 57 G 57 557 557 G G Y . n A 1 58 1MA 58 558 558 1MA 1MA Y . n A 1 59 C 59 559 559 C C Y . n A 1 60 U 60 560 560 U U Y . n A 1 61 C 61 561 561 C C Y . n A 1 62 G 62 562 562 G G Y . n A 1 63 C 63 563 563 C C Y . n A 1 64 C 64 564 564 C C Y . n A 1 65 C 65 565 565 C C Y . n A 1 66 C 66 566 566 C C Y . n A 1 67 C 67 567 567 C C Y . n A 1 68 G 68 568 568 G G Y . n A 1 69 G 69 569 569 G G Y . n A 1 70 G 70 570 570 G G Y . n A 1 71 A 71 571 571 A A Y . n A 1 72 G 72 572 572 G G Y . n A 1 73 A 73 573 573 A A Y . n A 1 74 C 74 574 574 C C Y . n A 1 75 C 75 575 575 C C Y . n A 1 76 A 76 576 576 A A Y . n B 2 1 MET 1 1 ? ? ? X . n B 2 2 SER 2 2 ? ? ? X . n B 2 3 SER 3 3 ? ? ? X . n B 2 4 ALA 4 4 ? ? ? X . n B 2 5 ALA 5 5 ? ? ? X . n B 2 6 THR 6 6 ? ? ? X . n B 2 7 VAL 7 7 ? ? ? X . n B 2 8 ASP 8 8 8 ASP ASP X . n B 2 9 PRO 9 9 9 PRO PRO X . n B 2 10 ASN 10 10 10 ASN ASN X . n B 2 11 GLU 11 11 11 GLU GLU X . n B 2 12 ALA 12 12 12 ALA ALA X . n B 2 13 PHE 13 13 13 PHE PHE X . n B 2 14 GLY 14 14 14 GLY GLY X . n B 2 15 LEU 15 15 15 LEU LEU X . n B 2 16 ILE 16 16 16 ILE ILE X . n B 2 17 THR 17 17 17 THR THR X . n B 2 18 LYS 18 18 18 LYS LYS X . n B 2 19 ASN 19 19 19 ASN ASN X . n B 2 20 LEU 20 20 20 LEU LEU X . n B 2 21 GLN 21 21 21 GLN GLN X . n B 2 22 GLU 22 22 22 GLU GLU X . n B 2 23 VAL 23 23 23 VAL VAL X . n B 2 24 LEU 24 24 24 LEU LEU X . n B 2 25 ASN 25 25 25 ASN ASN X . n B 2 26 PRO 26 26 26 PRO PRO X . n B 2 27 GLN 27 27 27 GLN GLN X . n B 2 28 ILE 28 28 28 ILE ILE X . n B 2 29 ILE 29 29 29 ILE ILE X . n B 2 30 LYS 30 30 30 LYS LYS X . n B 2 31 ASP 31 31 31 ASP ASP X . n B 2 32 VAL 32 32 32 VAL VAL X . n B 2 33 LEU 33 33 33 LEU LEU X . n B 2 34 GLU 34 34 34 GLU GLU X . n B 2 35 VAL 35 35 35 VAL VAL X . n B 2 36 GLN 36 36 36 GLN GLN X . n B 2 37 LYS 37 37 37 LYS LYS X . n B 2 38 ARG 38 38 38 ARG ARG X . n B 2 39 HIS 39 39 39 HIS HIS X . n B 2 40 LEU 40 40 40 LEU LEU X . n B 2 41 LYS 41 41 41 LYS LYS X . n B 2 42 LEU 42 42 42 LEU LEU X . n B 2 43 TYR 43 43 43 TYR TYR X . n B 2 44 TRP 44 44 44 TRP TRP X . n B 2 45 GLY 45 45 45 GLY GLY X . n B 2 46 THR 46 46 46 THR THR X . n B 2 47 ALA 47 47 47 ALA ALA X . n B 2 48 PRO 48 48 48 PRO PRO X . n B 2 49 THR 49 49 49 THR THR X . n B 2 50 GLY 50 50 50 GLY GLY X . n B 2 51 ARG 51 51 51 ARG ARG X . n B 2 52 PRO 52 52 52 PRO PRO X . n B 2 53 HIS 53 53 53 HIS HIS X . n B 2 54 CYS 54 54 54 CYS CYS X . n B 2 55 GLY 55 55 55 GLY GLY X . n B 2 56 TYR 56 56 56 TYR TYR X . n B 2 57 PHE 57 57 57 PHE PHE X . n B 2 58 VAL 58 58 58 VAL VAL X . n B 2 59 PRO 59 59 59 PRO PRO X . n B 2 60 MET 60 60 60 MET MET X . n B 2 61 THR 61 61 61 THR THR X . n B 2 62 LYS 62 62 62 LYS LYS X . n B 2 63 LEU 63 63 63 LEU LEU X . n B 2 64 ALA 64 64 64 ALA ALA X . n B 2 65 ASP 65 65 65 ASP ASP X . n B 2 66 PHE 66 66 66 PHE PHE X . n B 2 67 LEU 67 67 67 LEU LEU X . n B 2 68 LYS 68 68 68 LYS LYS X . n B 2 69 ALA 69 69 69 ALA ALA X . n B 2 70 GLY 70 70 70 GLY GLY X . n B 2 71 CYS 71 71 71 CYS CYS X . n B 2 72 GLU 72 72 72 GLU GLU X . n B 2 73 VAL 73 73 73 VAL VAL X . n B 2 74 THR 74 74 74 THR THR X . n B 2 75 VAL 75 75 75 VAL VAL X . n B 2 76 LEU 76 76 76 LEU LEU X . n B 2 77 LEU 77 77 77 LEU LEU X . n B 2 78 ALA 78 78 78 ALA ALA X . n B 2 79 ASP 79 79 79 ASP ASP X . n B 2 80 LEU 80 80 80 LEU LEU X . n B 2 81 HIS 81 81 81 HIS HIS X . n B 2 82 ALA 82 82 82 ALA ALA X . n B 2 83 PHE 83 83 83 PHE PHE X . n B 2 84 LEU 84 84 84 LEU LEU X . n B 2 85 ASP 85 85 85 ASP ASP X . n B 2 86 ASN 86 86 86 ASN ASN X . n B 2 87 MET 87 87 87 MET MET X . n B 2 88 LYS 88 88 88 LYS LYS X . n B 2 89 ALA 89 89 89 ALA ALA X . n B 2 90 PRO 90 90 90 PRO PRO X . n B 2 91 LEU 91 91 91 LEU LEU X . n B 2 92 GLU 92 92 92 GLU GLU X . n B 2 93 VAL 93 93 93 VAL VAL X . n B 2 94 VAL 94 94 94 VAL VAL X . n B 2 95 ASN 95 95 95 ASN ASN X . n B 2 96 TYR 96 96 96 TYR TYR X . n B 2 97 ARG 97 97 97 ARG ARG X . n B 2 98 ALA 98 98 98 ALA ALA X . n B 2 99 LYS 99 99 99 LYS LYS X . n B 2 100 TYR 100 100 100 TYR TYR X . n B 2 101 TYR 101 101 101 TYR TYR X . n B 2 102 GLU 102 102 102 GLU GLU X . n B 2 103 LEU 103 103 103 LEU LEU X . n B 2 104 THR 104 104 104 THR THR X . n B 2 105 ILE 105 105 105 ILE ILE X . n B 2 106 LYS 106 106 106 LYS LYS X . n B 2 107 ALA 107 107 107 ALA ALA X . n B 2 108 ILE 108 108 108 ILE ILE X . n B 2 109 LEU 109 109 109 LEU LEU X . n B 2 110 ARG 110 110 110 ARG ARG X . n B 2 111 SER 111 111 111 SER SER X . n B 2 112 ILE 112 112 112 ILE ILE X . n B 2 113 ASN 113 113 113 ASN ASN X . n B 2 114 VAL 114 114 114 VAL VAL X . n B 2 115 PRO 115 115 115 PRO PRO X . n B 2 116 ILE 116 116 116 ILE ILE X . n B 2 117 GLU 117 117 117 GLU GLU X . n B 2 118 LYS 118 118 118 LYS LYS X . n B 2 119 LEU 119 119 119 LEU LEU X . n B 2 120 LYS 120 120 120 LYS LYS X . n B 2 121 PHE 121 121 121 PHE PHE X . n B 2 122 VAL 122 122 122 VAL VAL X . n B 2 123 VAL 123 123 123 VAL VAL X . n B 2 124 GLY 124 124 124 GLY GLY X . n B 2 125 SER 125 125 125 SER SER X . n B 2 126 SER 126 126 126 SER SER X . n B 2 127 TYR 127 127 127 TYR TYR X . n B 2 128 GLN 128 128 128 GLN GLN X . n B 2 129 LEU 129 129 129 LEU LEU X . n B 2 130 THR 130 130 130 THR THR X . n B 2 131 PRO 131 131 131 PRO PRO X . n B 2 132 ASP 132 132 132 ASP ASP X . n B 2 133 TYR 133 133 133 TYR TYR X . n B 2 134 THR 134 134 134 THR THR X . n B 2 135 MET 135 135 135 MET MET X . n B 2 136 ASP 136 136 136 ASP ASP X . n B 2 137 ILE 137 137 137 ILE ILE X . n B 2 138 PHE 138 138 138 PHE PHE X . n B 2 139 ARG 139 139 139 ARG ARG X . n B 2 140 LEU 140 140 140 LEU LEU X . n B 2 141 SER 141 141 141 SER SER X . n B 2 142 ASN 142 142 142 ASN ASN X . n B 2 143 ILE 143 143 143 ILE ILE X . n B 2 144 VAL 144 144 144 VAL VAL X . n B 2 145 SER 145 145 145 SER SER X . n B 2 146 GLN 146 146 146 GLN GLN X . n B 2 147 ASN 147 147 147 ASN ASN X . n B 2 148 ASP 148 148 148 ASP ASP X . n B 2 149 ALA 149 149 149 ALA ALA X . n B 2 150 LYS 150 150 150 LYS LYS X . n B 2 151 ARG 151 151 151 ARG ARG X . n B 2 152 ALA 152 152 152 ALA ALA X . n B 2 153 GLY 153 153 153 GLY GLY X . n B 2 154 ALA 154 154 154 ALA ALA X . n B 2 155 ASP 155 155 155 ASP ASP X . n B 2 156 VAL 156 156 156 VAL VAL X . n B 2 157 VAL 157 157 157 VAL VAL X . n B 2 158 LYS 158 158 158 LYS LYS X . n B 2 159 GLN 159 159 159 GLN GLN X . n B 2 160 VAL 160 160 160 VAL VAL X . n B 2 161 ALA 161 161 161 ALA ALA X . n B 2 162 ASN 162 162 162 ASN ASN X . n B 2 163 PRO 163 163 163 PRO PRO X . n B 2 164 LEU 164 164 164 LEU LEU X . n B 2 165 LEU 165 165 165 LEU LEU X . n B 2 166 SER 166 166 166 SER SER X . n B 2 167 GLY 167 167 167 GLY GLY X . n B 2 168 LEU 168 168 168 LEU LEU X . n B 2 169 ILE 169 169 169 ILE ILE X . n B 2 170 TYR 170 170 170 TYR TYR X . n B 2 171 PRO 171 171 171 PRO PRO X . n B 2 172 LEU 172 172 172 LEU LEU X . n B 2 173 MET 173 173 173 MET MET X . n B 2 174 GLN 174 174 174 GLN GLN X . n B 2 175 ALA 175 175 175 ALA ALA X . n B 2 176 LEU 176 176 176 LEU LEU X . n B 2 177 ASP 177 177 177 ASP ASP X . n B 2 178 GLU 178 178 178 GLU GLU X . n B 2 179 GLN 179 179 179 GLN GLN X . n B 2 180 PHE 180 180 180 PHE PHE X . n B 2 181 LEU 181 181 181 LEU LEU X . n B 2 182 ASP 182 182 182 ASP ASP X . n B 2 183 VAL 183 183 183 VAL VAL X . n B 2 184 ASP 184 184 184 ASP ASP X . n B 2 185 CYS 185 185 185 CYS CYS X . n B 2 186 GLN 186 186 186 GLN GLN X . n B 2 187 PHE 187 187 187 PHE PHE X . n B 2 188 GLY 188 188 188 GLY GLY X . n B 2 189 GLY 189 189 189 GLY GLY X . n B 2 190 VAL 190 190 190 VAL VAL X . n B 2 191 ASP 191 191 191 ASP ASP X . n B 2 192 GLN 192 192 192 GLN GLN X . n B 2 193 ARG 193 193 193 ARG ARG X . n B 2 194 LYS 194 194 194 LYS LYS X . n B 2 195 ILE 195 195 195 ILE ILE X . n B 2 196 PHE 196 196 196 PHE PHE X . n B 2 197 VAL 197 197 197 VAL VAL X . n B 2 198 LEU 198 198 198 LEU LEU X . n B 2 199 ALA 199 199 199 ALA ALA X . n B 2 200 GLU 200 200 200 GLU GLU X . n B 2 201 GLU 201 201 201 GLU GLU X . n B 2 202 ASN 202 202 202 ASN ASN X . n B 2 203 LEU 203 203 203 LEU LEU X . n B 2 204 PRO 204 204 204 PRO PRO X . n B 2 205 SER 205 205 205 SER SER X . n B 2 206 LEU 206 206 206 LEU LEU X . n B 2 207 GLY 207 207 207 GLY GLY X . n B 2 208 TYR 208 208 208 TYR TYR X . n B 2 209 LYS 209 209 209 LYS LYS X . n B 2 210 LYS 210 210 210 LYS LYS X . n B 2 211 ARG 211 211 211 ARG ARG X . n B 2 212 ALA 212 212 212 ALA ALA X . n B 2 213 HIS 213 213 213 HIS HIS X . n B 2 214 LEU 214 214 214 LEU LEU X . n B 2 215 MET 215 215 215 MET MET X . n B 2 216 ASN 216 216 216 ASN ASN X . n B 2 217 PRO 217 217 217 PRO PRO X . n B 2 218 MET 218 218 218 MET MET X . n B 2 219 VAL 219 219 219 VAL VAL X . n B 2 220 PRO 220 220 220 PRO PRO X . n B 2 221 GLY 221 221 221 GLY GLY X . n B 2 222 LEU 222 222 222 LEU LEU X . n B 2 223 ALA 223 223 223 ALA ALA X . n B 2 224 GLN 224 224 ? ? ? X . n B 2 225 GLY 225 225 ? ? ? X . n B 2 226 GLY 226 226 ? ? ? X . n B 2 227 LYS 227 227 ? ? ? X . n B 2 228 MET 228 228 ? ? ? X . n B 2 229 SER 229 229 ? ? ? X . n B 2 230 ALA 230 230 ? ? ? X . n B 2 231 SER 231 231 ? ? ? X . n B 2 232 ASP 232 232 ? ? ? X . n B 2 233 PRO 233 233 ? ? ? X . n B 2 234 ASN 234 234 234 ASN ASN X . n B 2 235 SER 235 235 235 SER SER X . n B 2 236 LYS 236 236 236 LYS LYS X . n B 2 237 ILE 237 237 237 ILE ILE X . n B 2 238 ASP 238 238 238 ASP ASP X . n B 2 239 LEU 239 239 239 LEU LEU X . n B 2 240 LEU 240 240 240 LEU LEU X . n B 2 241 GLU 241 241 241 GLU GLU X . n B 2 242 GLU 242 242 242 GLU GLU X . n B 2 243 PRO 243 243 243 PRO PRO X . n B 2 244 LYS 244 244 244 LYS LYS X . n B 2 245 GLN 245 245 245 GLN GLN X . n B 2 246 VAL 246 246 246 VAL VAL X . n B 2 247 LYS 247 247 247 LYS LYS X . n B 2 248 LYS 248 248 248 LYS LYS X . n B 2 249 LYS 249 249 249 LYS LYS X . n B 2 250 ILE 250 250 250 ILE ILE X . n B 2 251 ASN 251 251 251 ASN ASN X . n B 2 252 SER 252 252 252 SER SER X . n B 2 253 ALA 253 253 253 ALA ALA X . n B 2 254 PHE 254 254 254 PHE PHE X . n B 2 255 CYS 255 255 255 CYS CYS X . n B 2 256 SER 256 256 256 SER SER X . n B 2 257 PRO 257 257 257 PRO PRO X . n B 2 258 GLY 258 258 258 GLY GLY X . n B 2 259 ASN 259 259 259 ASN ASN X . n B 2 260 VAL 260 260 260 VAL VAL X . n B 2 261 GLU 261 261 261 GLU GLU X . n B 2 262 GLU 262 262 262 GLU GLU X . n B 2 263 ASN 263 263 263 ASN ASN X . n B 2 264 GLY 264 264 264 GLY GLY X . n B 2 265 LEU 265 265 265 LEU LEU X . n B 2 266 LEU 266 266 266 LEU LEU X . n B 2 267 SER 267 267 267 SER SER X . n B 2 268 PHE 268 268 268 PHE PHE X . n B 2 269 VAL 269 269 269 VAL VAL X . n B 2 270 GLN 270 270 270 GLN GLN X . n B 2 271 TYR 271 271 271 TYR TYR X . n B 2 272 VAL 272 272 272 VAL VAL X . n B 2 273 ILE 273 273 273 ILE ILE X . n B 2 274 ALA 274 274 274 ALA ALA X . n B 2 275 PRO 275 275 275 PRO PRO X . n B 2 276 ILE 276 276 276 ILE ILE X . n B 2 277 GLN 277 277 277 GLN GLN X . n B 2 278 GLU 278 278 278 GLU GLU X . n B 2 279 LEU 279 279 279 LEU LEU X . n B 2 280 LYS 280 280 280 LYS LYS X . n B 2 281 PHE 281 281 281 PHE PHE X . n B 2 282 GLY 282 282 282 GLY GLY X . n B 2 283 THR 283 283 283 THR THR X . n B 2 284 ASN 284 284 284 ASN ASN X . n B 2 285 HIS 285 285 285 HIS HIS X . n B 2 286 PHE 286 286 286 PHE PHE X . n B 2 287 GLU 287 287 287 GLU GLU X . n B 2 288 PHE 288 288 288 PHE PHE X . n B 2 289 PHE 289 289 289 PHE PHE X . n B 2 290 ILE 290 290 290 ILE ILE X . n B 2 291 ASP 291 291 291 ASP ASP X . n B 2 292 ARG 292 292 292 ARG ARG X . n B 2 293 PRO 293 293 293 PRO PRO X . n B 2 294 GLU 294 294 294 GLU GLU X . n B 2 295 LYS 295 295 295 LYS LYS X . n B 2 296 PHE 296 296 296 PHE PHE X . n B 2 297 GLY 297 297 297 GLY GLY X . n B 2 298 GLY 298 298 298 GLY GLY X . n B 2 299 PRO 299 299 299 PRO PRO X . n B 2 300 ILE 300 300 300 ILE ILE X . n B 2 301 THR 301 301 301 THR THR X . n B 2 302 TYR 302 302 302 TYR TYR X . n B 2 303 LYS 303 303 303 LYS LYS X . n B 2 304 SER 304 304 304 SER SER X . n B 2 305 PHE 305 305 305 PHE PHE X . n B 2 306 GLU 306 306 306 GLU GLU X . n B 2 307 GLU 307 307 307 GLU GLU X . n B 2 308 MET 308 308 308 MET MET X . n B 2 309 LYS 309 309 309 LYS LYS X . n B 2 310 LEU 310 310 310 LEU LEU X . n B 2 311 ALA 311 311 311 ALA ALA X . n B 2 312 PHE 312 312 312 PHE PHE X . n B 2 313 LYS 313 313 313 LYS LYS X . n B 2 314 GLU 314 314 314 GLU GLU X . n B 2 315 GLU 315 315 315 GLU GLU X . n B 2 316 LYS 316 316 316 LYS LYS X . n B 2 317 LEU 317 317 317 LEU LEU X . n B 2 318 SER 318 318 318 SER SER X . n B 2 319 PRO 319 319 319 PRO PRO X . n B 2 320 PRO 320 320 320 PRO PRO X . n B 2 321 ASP 321 321 321 ASP ASP X . n B 2 322 LEU 322 322 322 LEU LEU X . n B 2 323 LYS 323 323 323 LYS LYS X . n B 2 324 ILE 324 324 324 ILE ILE X . n B 2 325 GLY 325 325 325 GLY GLY X . n B 2 326 VAL 326 326 326 VAL VAL X . n B 2 327 ALA 327 327 327 ALA ALA X . n B 2 328 ASP 328 328 328 ASP ASP X . n B 2 329 ALA 329 329 329 ALA ALA X . n B 2 330 ILE 330 330 330 ILE ILE X . n B 2 331 ASN 331 331 331 ASN ASN X . n B 2 332 GLU 332 332 332 GLU GLU X . n B 2 333 LEU 333 333 333 LEU LEU X . n B 2 334 LEU 334 334 334 LEU LEU X . n B 2 335 GLU 335 335 335 GLU GLU X . n B 2 336 PRO 336 336 336 PRO PRO X . n B 2 337 ILE 337 337 337 ILE ILE X . n B 2 338 ARG 338 338 338 ARG ARG X . n B 2 339 GLN 339 339 339 GLN GLN X . n B 2 340 GLU 340 340 340 GLU GLU X . n B 2 341 PHE 341 341 341 PHE PHE X . n B 2 342 ALA 342 342 342 ALA ALA X . n B 2 343 ASN 343 343 343 ASN ASN X . n B 2 344 ASN 344 344 344 ASN ASN X . n B 2 345 LYS 345 345 345 LYS LYS X . n B 2 346 GLU 346 346 346 GLU GLU X . n B 2 347 PHE 347 347 347 PHE PHE X . n B 2 348 GLN 348 348 348 GLN GLN X . n B 2 349 GLU 349 349 349 GLU GLU X . n B 2 350 ALA 350 350 350 ALA ALA X . n B 2 351 SER 351 351 351 SER SER X . n B 2 352 GLU 352 352 352 GLU GLU X . n B 2 353 LYS 353 353 353 LYS LYS X . n B 2 354 GLY 354 354 354 GLY GLY X . n B 2 355 TYR 355 355 355 TYR TYR X . n B 2 356 PRO 356 356 356 PRO PRO X . n B 2 357 VAL 357 357 ? ? ? X . n B 2 358 ALA 358 358 ? ? ? X . n B 2 359 THR 359 359 ? ? ? X . n B 2 360 PRO 360 360 ? ? ? X . n B 2 361 GLN 361 361 ? ? ? X . n B 2 362 LYS 362 362 ? ? ? X . n B 2 363 SER 363 363 ? ? ? X . n B 2 364 LYS 364 364 ? ? ? X . n B 2 365 LYS 365 365 ? ? ? X . n B 2 366 ALA 366 366 ? ? ? X . n B 2 367 LYS 367 367 ? ? ? X . n B 2 368 LYS 368 368 ? ? ? X . n B 2 369 PRO 369 369 ? ? ? X . n B 2 370 LYS 370 370 ? ? ? X . n B 2 371 ASN 371 371 ? ? ? X . n B 2 372 LYS 372 372 ? ? ? X . n B 2 373 GLY 373 373 ? ? ? X . n B 2 374 THR 374 374 ? ? ? X . n B 2 375 LYS 375 375 ? ? ? X . n B 2 376 TYR 376 376 ? ? ? X . n B 2 377 PRO 377 377 ? ? ? X . n B 2 378 GLY 378 378 ? ? ? X . n B 2 379 ALA 379 379 ? ? ? X . n B 2 380 THR 380 380 ? ? ? X . n B 2 381 LYS 381 381 ? ? ? X . n B 2 382 THR 382 382 ? ? ? X . n B 2 383 ASN 383 383 ? ? ? X . n B 2 384 GLU 384 384 ? ? ? X . n B 2 385 ILE 385 385 ? ? ? X . n B 2 386 ALA 386 386 ? ? ? X . n B 2 387 THR 387 387 ? ? ? X . n B 2 388 LYS 388 388 ? ? ? X . n B 2 389 LEU 389 389 ? ? ? X . n B 2 390 GLU 390 390 ? ? ? X . n B 2 391 GLU 391 391 ? ? ? X . n B 2 392 THR 392 392 ? ? ? X . n B 2 393 LYS 393 393 ? ? ? X . n B 2 394 LEU 394 394 ? ? ? X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 801 801 MG MG X . D 4 YMP 1 601 601 YMP YMP X . E 5 HOH 1 4 4 HOH HOH Y . E 5 HOH 2 16 16 HOH HOH Y . E 5 HOH 3 26 26 HOH HOH Y . E 5 HOH 4 35 35 HOH HOH Y . E 5 HOH 5 45 45 HOH HOH Y . E 5 HOH 6 46 46 HOH HOH Y . E 5 HOH 7 54 54 HOH HOH Y . F 5 HOH 1 802 1 HOH HOH X . F 5 HOH 2 803 2 HOH HOH X . F 5 HOH 3 804 3 HOH HOH X . F 5 HOH 4 805 5 HOH HOH X . F 5 HOH 5 806 6 HOH HOH X . F 5 HOH 6 807 7 HOH HOH X . F 5 HOH 7 808 8 HOH HOH X . F 5 HOH 8 809 9 HOH HOH X . F 5 HOH 9 810 10 HOH HOH X . F 5 HOH 10 811 11 HOH HOH X . F 5 HOH 11 812 12 HOH HOH X . F 5 HOH 12 813 13 HOH HOH X . F 5 HOH 13 814 14 HOH HOH X . F 5 HOH 14 815 15 HOH HOH X . F 5 HOH 15 816 17 HOH HOH X . F 5 HOH 16 817 18 HOH HOH X . F 5 HOH 17 818 19 HOH HOH X . F 5 HOH 18 819 20 HOH HOH X . F 5 HOH 19 820 21 HOH HOH X . F 5 HOH 20 821 22 HOH HOH X . F 5 HOH 21 822 23 HOH HOH X . F 5 HOH 22 823 24 HOH HOH X . F 5 HOH 23 824 25 HOH HOH X . F 5 HOH 24 825 27 HOH HOH X . F 5 HOH 25 826 28 HOH HOH X . F 5 HOH 26 827 29 HOH HOH X . F 5 HOH 27 828 30 HOH HOH X . F 5 HOH 28 829 31 HOH HOH X . F 5 HOH 29 830 32 HOH HOH X . F 5 HOH 30 831 33 HOH HOH X . F 5 HOH 31 832 34 HOH HOH X . F 5 HOH 32 833 36 HOH HOH X . F 5 HOH 33 834 37 HOH HOH X . F 5 HOH 34 835 38 HOH HOH X . F 5 HOH 35 836 39 HOH HOH X . F 5 HOH 36 837 40 HOH HOH X . F 5 HOH 37 838 41 HOH HOH X . F 5 HOH 38 839 42 HOH HOH X . F 5 HOH 39 840 43 HOH HOH X . F 5 HOH 40 841 44 HOH HOH X . F 5 HOH 41 842 47 HOH HOH X . F 5 HOH 42 843 48 HOH HOH X . F 5 HOH 43 844 49 HOH HOH X . F 5 HOH 44 845 50 HOH HOH X . F 5 HOH 45 846 51 HOH HOH X . F 5 HOH 46 847 52 HOH HOH X . F 5 HOH 47 848 53 HOH HOH X . F 5 HOH 48 849 55 HOH HOH X . F 5 HOH 49 850 56 HOH HOH X . F 5 HOH 50 851 57 HOH HOH X . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 Y 2MG 510 ? CM2 ? A 2MG 10 CM2 2 1 Y 1 Y U 516 ? "C5'" ? A U 16 "C5'" 3 1 Y 1 Y U 516 ? "C4'" ? A U 16 "C4'" 4 1 Y 1 Y U 516 ? "O4'" ? A U 16 "O4'" 5 1 Y 1 Y U 516 ? "C3'" ? A U 16 "C3'" 6 1 Y 1 Y U 516 ? "O3'" ? A U 16 "O3'" 7 1 Y 1 Y U 516 ? "C2'" ? A U 16 "C2'" 8 1 Y 1 Y U 516 ? "O2'" ? A U 16 "O2'" 9 1 Y 1 Y U 516 ? "C1'" ? A U 16 "C1'" 10 1 Y 1 Y U 516 ? N1 ? A U 16 N1 11 1 Y 1 Y U 516 ? C2 ? A U 16 C2 12 1 Y 1 Y U 516 ? O2 ? A U 16 O2 13 1 Y 1 Y U 516 ? N3 ? A U 16 N3 14 1 Y 1 Y U 516 ? C4 ? A U 16 C4 15 1 Y 1 Y U 516 ? O4 ? A U 16 O4 16 1 Y 1 Y U 516 ? C5 ? A U 16 C5 17 1 Y 1 Y U 516 ? C6 ? A U 16 C6 18 1 Y 1 Y OMG 518 ? CM2 ? A OMG 18 CM2 19 1 Y 1 Y G 520 ? "C5'" ? A G 20 "C5'" 20 1 Y 1 Y G 520 ? "C4'" ? A G 20 "C4'" 21 1 Y 1 Y G 520 ? "O4'" ? A G 20 "O4'" 22 1 Y 1 Y G 520 ? "C3'" ? A G 20 "C3'" 23 1 Y 1 Y G 520 ? "O3'" ? A G 20 "O3'" 24 1 Y 1 Y G 520 ? "C2'" ? A G 20 "C2'" 25 1 Y 1 Y G 520 ? "O2'" ? A G 20 "O2'" 26 1 Y 1 Y G 520 ? "C1'" ? A G 20 "C1'" 27 1 Y 1 Y G 520 ? N9 ? A G 20 N9 28 1 Y 1 Y G 520 ? C8 ? A G 20 C8 29 1 Y 1 Y G 520 ? N7 ? A G 20 N7 30 1 Y 1 Y G 520 ? C5 ? A G 20 C5 31 1 Y 1 Y G 520 ? C6 ? A G 20 C6 32 1 Y 1 Y G 520 ? O6 ? A G 20 O6 33 1 Y 1 Y G 520 ? N1 ? A G 20 N1 34 1 Y 1 Y G 520 ? C2 ? A G 20 C2 35 1 Y 1 Y G 520 ? N2 ? A G 20 N2 36 1 Y 1 Y G 520 ? N3 ? A G 20 N3 37 1 Y 1 Y G 520 ? C4 ? A G 20 C4 38 1 Y 1 Y M2G 526 ? CM1 ? A M2G 26 CM1 39 1 Y 1 Y M2G 526 ? CM2 ? A M2G 26 CM2 40 1 Y 1 Y A 528 ? "O2'" ? A A 28 "O2'" 41 1 Y 1 Y A 529 ? "O2'" ? A A 29 "O2'" 42 1 Y 1 Y G 530 ? "O2'" ? A G 30 "O2'" 43 1 Y 1 Y A 531 ? "C5'" ? A A 31 "C5'" 44 1 Y 1 Y A 531 ? "C4'" ? A A 31 "C4'" 45 1 Y 1 Y A 531 ? "O4'" ? A A 31 "O4'" 46 1 Y 1 Y A 531 ? "C3'" ? A A 31 "C3'" 47 1 Y 1 Y A 531 ? "O3'" ? A A 31 "O3'" 48 1 Y 1 Y A 531 ? "C2'" ? A A 31 "C2'" 49 1 Y 1 Y A 531 ? "O2'" ? A A 31 "O2'" 50 1 Y 1 Y A 531 ? "C1'" ? A A 31 "C1'" 51 1 Y 1 Y A 531 ? N9 ? A A 31 N9 52 1 Y 1 Y A 531 ? C8 ? A A 31 C8 53 1 Y 1 Y A 531 ? N7 ? A A 31 N7 54 1 Y 1 Y A 531 ? C5 ? A A 31 C5 55 1 Y 1 Y A 531 ? C6 ? A A 31 C6 56 1 Y 1 Y A 531 ? N6 ? A A 31 N6 57 1 Y 1 Y A 531 ? N1 ? A A 31 N1 58 1 Y 1 Y A 531 ? C2 ? A A 31 C2 59 1 Y 1 Y A 531 ? N3 ? A A 31 N3 60 1 Y 1 Y A 531 ? C4 ? A A 31 C4 61 1 Y 1 Y U 533 ? P ? A U 33 P 62 1 Y 1 Y U 533 ? OP1 ? A U 33 OP1 63 1 Y 1 Y U 533 ? OP2 ? A U 33 OP2 64 1 Y 1 Y U 533 ? "O5'" ? A U 33 "O5'" 65 1 Y 1 Y U 533 ? "C5'" ? A U 33 "C5'" 66 1 Y 1 Y U 533 ? "C4'" ? A U 33 "C4'" 67 1 Y 1 Y U 533 ? "O4'" ? A U 33 "O4'" 68 1 Y 1 Y U 533 ? "C3'" ? A U 33 "C3'" 69 1 Y 1 Y U 533 ? "C2'" ? A U 33 "C2'" 70 1 Y 1 Y U 533 ? "O2'" ? A U 33 "O2'" 71 1 Y 1 Y U 533 ? "C1'" ? A U 33 "C1'" 72 1 Y 1 Y U 533 ? N1 ? A U 33 N1 73 1 Y 1 Y U 533 ? C2 ? A U 33 C2 74 1 Y 1 Y U 533 ? O2 ? A U 33 O2 75 1 Y 1 Y U 533 ? N3 ? A U 33 N3 76 1 Y 1 Y U 533 ? C4 ? A U 33 C4 77 1 Y 1 Y U 533 ? O4 ? A U 33 O4 78 1 Y 1 Y U 533 ? C5 ? A U 33 C5 79 1 Y 1 Y U 533 ? C6 ? A U 33 C6 80 1 Y 1 Y 6IA 537 ? C12 ? A 6IA 37 C12 81 1 Y 1 Y 6IA 537 ? C13 ? A 6IA 37 C13 82 1 Y 1 Y 6IA 537 ? C14 ? A 6IA 37 C14 83 1 Y 1 Y 6IA 537 ? C15 ? A 6IA 37 C15 84 1 Y 1 Y 6IA 537 ? C16 ? A 6IA 37 C16 85 1 Y 1 Y PSU 539 ? N1 ? A PSU 39 N1 86 1 Y 1 Y PSU 539 ? C2 ? A PSU 39 C2 87 1 Y 1 Y PSU 539 ? N3 ? A PSU 39 N3 88 1 Y 1 Y PSU 539 ? C4 ? A PSU 39 C4 89 1 Y 1 Y PSU 539 ? C5 ? A PSU 39 C5 90 1 Y 1 Y PSU 539 ? C6 ? A PSU 39 C6 91 1 Y 1 Y PSU 539 ? O2 ? A PSU 39 O2 92 1 Y 1 Y PSU 539 ? O4 ? A PSU 39 O4 93 1 Y 1 Y C 540 ? N1 ? A C 40 N1 94 1 Y 1 Y C 540 ? C2 ? A C 40 C2 95 1 Y 1 Y C 540 ? O2 ? A C 40 O2 96 1 Y 1 Y C 540 ? N3 ? A C 40 N3 97 1 Y 1 Y C 540 ? C4 ? A C 40 C4 98 1 Y 1 Y C 540 ? N4 ? A C 40 N4 99 1 Y 1 Y C 540 ? C5 ? A C 40 C5 100 1 Y 1 Y C 540 ? C6 ? A C 40 C6 101 1 Y 1 Y U 541 ? N1 ? A U 41 N1 102 1 Y 1 Y U 541 ? C2 ? A U 41 C2 103 1 Y 1 Y U 541 ? O2 ? A U 41 O2 104 1 Y 1 Y U 541 ? N3 ? A U 41 N3 105 1 Y 1 Y U 541 ? C4 ? A U 41 C4 106 1 Y 1 Y U 541 ? O4 ? A U 41 O4 107 1 Y 1 Y U 541 ? C5 ? A U 41 C5 108 1 Y 1 Y U 541 ? C6 ? A U 41 C6 109 1 Y 1 Y G 546 ? "C5'" ? A G 46 "C5'" 110 1 Y 1 Y G 546 ? "C4'" ? A G 46 "C4'" 111 1 Y 1 Y G 546 ? "O4'" ? A G 46 "O4'" 112 1 Y 1 Y G 546 ? "C3'" ? A G 46 "C3'" 113 1 Y 1 Y G 546 ? "O3'" ? A G 46 "O3'" 114 1 Y 1 Y G 546 ? "C2'" ? A G 46 "C2'" 115 1 Y 1 Y G 546 ? "O2'" ? A G 46 "O2'" 116 1 Y 1 Y G 546 ? "C1'" ? A G 46 "C1'" 117 1 Y 1 Y G 546 ? N9 ? A G 46 N9 118 1 Y 1 Y G 546 ? C8 ? A G 46 C8 119 1 Y 1 Y G 546 ? N7 ? A G 46 N7 120 1 Y 1 Y G 546 ? C5 ? A G 46 C5 121 1 Y 1 Y G 546 ? C6 ? A G 46 C6 122 1 Y 1 Y G 546 ? O6 ? A G 46 O6 123 1 Y 1 Y G 546 ? N1 ? A G 46 N1 124 1 Y 1 Y G 546 ? C2 ? A G 46 C2 125 1 Y 1 Y G 546 ? N2 ? A G 46 N2 126 1 Y 1 Y G 546 ? N3 ? A G 46 N3 127 1 Y 1 Y G 546 ? C4 ? A G 46 C4 128 1 Y 1 Y U 547 ? "O2'" ? A U 47 "O2'" # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 ADSC 'data collection' . ? 2 MOSFLM 'data reduction' . ? 3 SHARP phasing . ? 4 # _cell.entry_id 2DLC _cell.length_a 63.854 _cell.length_b 63.854 _cell.length_c 330.334 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DLC _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2DLC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 50.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'Tris, PEG 400, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Tris ? ? ? 1 2 1 'PEG 400' ? ? ? 1 3 1 H2O ? ? ? 1 4 2 Tris ? ? ? 1 5 2 'PEG 400' ? ? ? 1 6 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9798 1.0 2 0.9801 1.0 3 0.9819 1.0 4 0.9727 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL38B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL38B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9798, 0.9801, 0.9819, 0.9727' # _reflns.entry_id 2DLC _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.4 _reflns.number_obs 27897 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_sigmaI 11.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.53 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2DLC _refine.ls_number_reflns_obs 26411 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.30 _refine.ls_R_factor_obs 0.24707 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.24491 _refine.ls_R_factor_R_free 0.28889 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1403 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.916 _refine.correlation_coeff_Fo_to_Fc_free 0.882 _refine.B_iso_mean 32.966 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] 0.06 _refine.aniso_B[3][3] -0.12 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.405 _refine.pdbx_overall_ESU_R_Free 0.284 _refine.overall_SU_ML 0.224 _refine.overall_SU_B 9.713 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2698 _refine_hist.pdbx_number_atoms_nucleic_acid 1472 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 4263 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.021 ? 4436 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.124 2.399 ? 6332 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.300 5.000 ? 337 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.067 0.200 ? 687 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 2799 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.176 0.200 ? 1901 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.138 0.200 ? 143 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.176 0.200 ? 56 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.071 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.253 1.500 ? 1702 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.477 2.000 ? 2754 'X-RAY DIFFRACTION' ? r_scbond_it 0.521 3.000 ? 2734 'X-RAY DIFFRACTION' ? r_scangle_it 0.742 4.500 ? 3578 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.401 _refine_ls_shell.d_res_low 2.463 _refine_ls_shell.number_reflns_R_work 1929 _refine_ls_shell.R_factor_R_work 0.347 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.405 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2DLC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2DLC _struct.title 'Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DLC _struct_keywords.pdbx_keywords LIGASE/tRNA _struct_keywords.text 'TyrRS, tRNA, LIGASE-tRNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SYYC_YEAST P36421 2 ;SSAATVDPNEAFGLITKNLQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRPHCGYFVPMTKLADFLKAGCEVTVLLADLH AFLDNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLTPDYTMDIFRLSNIVSQNDAKRAGADVVKQVA NPLLSGLIYPLMQALDEQFLDVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNSKIDLLE EPKQVKKKINSAFCSPGNVEENGLLSFVQYVIAPIQELKFGTNHFEFFIDRPEKFGGPITYKSFEEMKLAFKEEKLSPPD LKIGVADAINELLEPIRQEFANNKEFQEASEKGYPVATPQKSKKAKKPKNKGTKYPGATKTNEIATKLEETKL ; 1 ? 2 PDB 2DLC 2DLC 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DLC X 2 ? 394 ? P36421 1 ? 393 ? 2 394 2 2 2DLC Y 1 ? 76 ? 2DLC 501 ? 576 ? 501 576 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2DLC _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id X _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P36421 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 19860 ? 1 MORE -28 ? 1 'SSA (A^2)' 48750 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 330.3340000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP B 8 ? LYS B 18 ? ASP X 8 LYS X 18 1 ? 11 HELX_P HELX_P2 2 ASN B 25 ? VAL B 35 ? ASN X 25 VAL X 35 1 ? 11 HELX_P HELX_P3 3 HIS B 53 ? GLY B 55 ? HIS X 53 GLY X 55 5 ? 3 HELX_P HELX_P4 4 TYR B 56 ? ALA B 69 ? TYR X 56 ALA X 69 1 ? 14 HELX_P HELX_P5 5 ALA B 78 ? ASP B 85 ? ALA X 78 ASP X 85 1 ? 8 HELX_P HELX_P6 6 GLU B 92 ? ILE B 112 ? GLU X 92 ILE X 112 1 ? 21 HELX_P HELX_P7 7 GLY B 124 ? LEU B 129 ? GLY X 124 LEU X 129 1 ? 6 HELX_P HELX_P8 8 THR B 130 ? ASN B 142 ? THR X 130 ASN X 142 1 ? 13 HELX_P HELX_P9 9 SER B 145 ? GLY B 153 ? SER X 145 GLY X 153 1 ? 9 HELX_P HELX_P10 10 LEU B 165 ? LEU B 181 ? LEU X 165 LEU X 181 1 ? 17 HELX_P HELX_P11 11 GLN B 192 ? LEU B 203 ? GLN X 192 LEU X 203 1 ? 12 HELX_P HELX_P12 12 PRO B 204 ? GLY B 207 ? PRO X 204 GLY X 207 5 ? 4 HELX_P HELX_P13 13 GLU B 242 ? ALA B 253 ? GLU X 242 ALA X 253 1 ? 12 HELX_P HELX_P14 14 ASN B 263 ? VAL B 272 ? ASN X 263 VAL X 272 1 ? 10 HELX_P HELX_P15 15 VAL B 272 ? LEU B 279 ? VAL X 272 LEU X 279 1 ? 8 HELX_P HELX_P16 16 PRO B 293 ? GLY B 297 ? PRO X 293 GLY X 297 5 ? 5 HELX_P HELX_P17 17 SER B 304 ? GLU B 314 ? SER X 304 GLU X 314 1 ? 11 HELX_P HELX_P18 18 SER B 318 ? ASN B 344 ? SER X 318 ASN X 344 1 ? 27 HELX_P HELX_P19 19 ASN B 344 ? TYR B 355 ? ASN X 344 TYR X 355 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A A 9 "O3'" ? ? ? 1_555 A 2MG 10 P ? ? Y A 509 Y 2MG 510 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale2 covale both ? A 2MG 10 "O3'" ? ? ? 1_555 A C 11 P ? ? Y 2MG 510 Y C 511 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? A OMG 18 "O3'" ? ? ? 1_555 A G 19 P ? ? Y OMG 518 Y G 519 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale4 covale both ? A C 25 "O3'" ? ? ? 1_555 A M2G 26 P ? ? Y C 525 Y M2G 526 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale5 covale both ? A M2G 26 "O3'" ? ? ? 1_555 A C 27 P ? ? Y M2G 526 Y C 527 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale6 covale both ? A G 34 "O3'" ? ? ? 1_555 A PSU 35 P ? ? Y G 534 Y PSU 535 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale7 covale both ? A PSU 35 "O3'" ? ? ? 1_555 A A 36 P ? ? Y PSU 535 Y A 536 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale8 covale both ? A A 36 "O3'" ? ? ? 1_555 A 6IA 37 P ? ? Y A 536 Y 6IA 537 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale9 covale both ? A 6IA 37 "O3'" ? ? ? 1_555 A A 38 P ? ? Y 6IA 537 Y A 538 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale10 covale both ? A A 38 "O3'" ? ? ? 1_555 A PSU 39 P ? ? Y A 538 Y PSU 539 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale11 covale both ? A PSU 39 "O3'" ? ? ? 1_555 A C 40 P ? ? Y PSU 539 Y C 540 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale12 covale both ? A U 47 "O3'" ? ? ? 1_555 A 5MC 48 P ? ? Y U 547 Y 5MC 548 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale13 covale both ? A 5MC 48 "O3'" ? ? ? 1_555 A G 49 P ? ? Y 5MC 548 Y G 549 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale14 covale both ? A G 53 "O3'" ? ? ? 1_555 A 5MU 54 P ? ? Y G 553 Y 5MU 554 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale15 covale both ? A 5MU 54 "O3'" ? ? ? 1_555 A PSU 55 P ? ? Y 5MU 554 Y PSU 555 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale16 covale both ? A PSU 55 "O3'" ? ? ? 1_555 A C 56 P ? ? Y PSU 555 Y C 556 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale17 covale both ? A G 57 "O3'" ? ? ? 1_555 A 1MA 58 P ? ? Y G 557 Y 1MA 558 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale18 covale both ? A 1MA 58 "O3'" ? ? ? 1_555 A C 59 P ? ? Y 1MA 558 Y C 559 1_555 ? ? ? ? ? ? ? 1.599 ? ? metalc1 metalc ? ? B ALA 47 O ? ? ? 1_555 C MG . MG ? ? X ALA 47 X MG 801 1_555 ? ? ? ? ? ? ? 2.742 ? ? metalc2 metalc ? ? B TYR 56 OH ? ? ? 1_555 C MG . MG ? ? X TYR 56 X MG 801 1_555 ? ? ? ? ? ? ? 2.799 ? ? metalc3 metalc ? ? B TYR 101 OH ? ? ? 1_555 C MG . MG ? ? X TYR 101 X MG 801 1_555 ? ? ? ? ? ? ? 2.926 ? ? metalc4 metalc ? ? D YMP . O2P ? ? ? 1_555 C MG . MG ? ? X YMP 601 X MG 801 1_555 ? ? ? ? ? ? ? 2.606 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 72 N1 ? ? Y C 501 Y G 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 72 O6 ? ? Y C 501 Y G 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 72 N2 ? ? Y C 501 Y G 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 A A 71 N1 ? ? Y U 502 Y A 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 A A 71 N6 ? ? Y U 502 Y A 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 70 N1 ? ? Y C 503 Y G 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 70 O6 ? ? Y C 503 Y G 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 70 N2 ? ? Y C 503 Y G 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A G 69 O6 ? ? Y U 504 Y G 569 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog10 hydrog ? ? A U 4 O2 ? ? ? 1_555 A G 69 N1 ? ? Y U 504 Y G 569 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog11 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 68 N1 ? ? Y C 505 Y G 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 68 O6 ? ? Y C 505 Y G 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 68 N2 ? ? Y C 505 Y G 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 67 N3 ? ? Y G 506 Y C 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 67 O2 ? ? Y G 506 Y C 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 67 N4 ? ? Y G 506 Y C 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 66 N3 ? ? Y G 507 Y C 566 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog18 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 14 N7 ? ? Y U 508 Y A 514 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog19 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 14 N6 ? ? Y U 508 Y A 514 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog20 hydrog ? ? A 2MG 10 N1 ? ? ? 1_555 A C 25 N3 ? ? Y 2MG 510 Y C 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A 2MG 10 N2 ? ? ? 1_555 A C 25 O2 ? ? Y 2MG 510 Y C 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A 2MG 10 O6 ? ? ? 1_555 A C 25 N4 ? ? Y 2MG 510 Y C 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A 2MG 10 O6 ? ? ? 1_555 A G 45 N2 ? ? Y 2MG 510 Y G 545 1_555 ? ? ? ? ? ? '2MG-G MISPAIR' ? ? ? hydrog24 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 24 N1 ? ? Y C 511 Y G 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 24 O6 ? ? Y C 511 Y G 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 24 N2 ? ? Y C 511 Y G 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 23 N1 ? ? Y C 512 Y G 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 23 O6 ? ? Y C 512 Y G 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 23 N2 ? ? Y C 512 Y G 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 13 N3 ? ? ? 1_555 A A 22 N6 ? ? Y A 513 Y A 522 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog31 hydrog ? ? A A 14 N6 ? ? ? 1_555 A A 21 N3 ? ? Y A 514 Y A 521 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A G 15 N1 ? ? ? 1_555 A 5MC 48 O2 ? ? Y G 515 Y 5MC 548 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog33 hydrog ? ? A G 15 N2 ? ? ? 1_555 A 5MC 48 N3 ? ? Y G 515 Y 5MC 548 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog34 hydrog ? ? A OMG 18 N1 ? ? ? 1_555 A PSU 55 O4 ? ? Y OMG 518 Y PSU 555 1_555 ? ? ? ? ? ? 'OMG-PSU MISPAIR' ? ? ? hydrog35 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 56 N3 ? ? Y G 519 Y C 556 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog36 hydrog ? ? A M2G 26 N1 ? ? ? 1_555 A A 44 N1 ? ? Y M2G 526 Y A 544 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog37 hydrog ? ? A M2G 26 O6 ? ? ? 1_555 A A 44 N6 ? ? Y M2G 526 Y A 544 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog38 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 43 N1 ? ? Y C 527 Y G 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 43 O6 ? ? Y C 527 Y G 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 43 N2 ? ? Y C 527 Y G 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A A 28 N6 ? ? ? 1_555 A U 42 O2 ? ? Y A 528 Y U 542 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog42 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 65 N3 ? ? Y G 549 Y C 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 65 O2 ? ? Y G 549 Y C 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 65 N4 ? ? Y G 549 Y C 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 50 N1 ? ? ? 1_555 A C 64 N3 ? ? Y G 550 Y C 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 50 N2 ? ? ? 1_555 A C 64 O2 ? ? Y G 550 Y C 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 50 O6 ? ? ? 1_555 A C 64 N4 ? ? Y G 550 Y C 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 51 N1 ? ? ? 1_555 A C 63 N3 ? ? Y G 551 Y C 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 51 N2 ? ? ? 1_555 A C 63 O2 ? ? Y G 551 Y C 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 51 O6 ? ? ? 1_555 A C 63 N4 ? ? Y G 551 Y C 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 52 N3 ? ? ? 1_555 A G 62 N1 ? ? Y C 552 Y G 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 52 N4 ? ? ? 1_555 A G 62 O6 ? ? Y C 552 Y G 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 52 O2 ? ? ? 1_555 A G 62 N2 ? ? Y C 552 Y G 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 61 N3 ? ? Y G 553 Y C 561 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 61 O2 ? ? Y G 553 Y C 561 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 61 N4 ? ? Y G 553 Y C 561 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A 5MU 54 N3 ? ? ? 1_555 A 1MA 58 N7 ? ? Y 5MU 554 Y 1MA 558 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog58 hydrog ? ? A 5MU 54 O2 ? ? ? 1_555 A 1MA 58 N6 ? ? Y 5MU 554 Y 1MA 558 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B ALA 47 ? X ALA 47 ? 1_555 MG ? C MG . ? X MG 801 ? 1_555 OH ? B TYR 56 ? X TYR 56 ? 1_555 124.6 ? 2 O ? B ALA 47 ? X ALA 47 ? 1_555 MG ? C MG . ? X MG 801 ? 1_555 OH ? B TYR 101 ? X TYR 101 ? 1_555 72.7 ? 3 OH ? B TYR 56 ? X TYR 56 ? 1_555 MG ? C MG . ? X MG 801 ? 1_555 OH ? B TYR 101 ? X TYR 101 ? 1_555 86.4 ? 4 O ? B ALA 47 ? X ALA 47 ? 1_555 MG ? C MG . ? X MG 801 ? 1_555 O2P ? D YMP . ? X YMP 601 ? 1_555 87.2 ? 5 OH ? B TYR 56 ? X TYR 56 ? 1_555 MG ? C MG . ? X MG 801 ? 1_555 O2P ? D YMP . ? X YMP 601 ? 1_555 65.8 ? 6 OH ? B TYR 101 ? X TYR 101 ? 1_555 MG ? C MG . ? X MG 801 ? 1_555 O2P ? D YMP . ? X YMP 601 ? 1_555 127.3 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU B 22 ? LEU B 24 ? GLU X 22 LEU X 24 A 2 ALA B 212 ? ASN B 216 ? ALA X 212 ASN X 216 A 3 CYS B 185 ? GLY B 189 ? CYS X 185 GLY X 189 A 4 LYS B 41 ? THR B 46 ? LYS X 41 THR X 46 A 5 GLU B 72 ? LEU B 77 ? GLU X 72 LEU X 77 A 6 LYS B 120 ? VAL B 123 ? LYS X 120 VAL X 123 B 1 PHE B 288 ? ILE B 290 ? PHE X 288 ILE X 290 B 2 ILE B 300 ? TYR B 302 ? ILE X 300 TYR X 302 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU B 24 ? N LEU X 24 O HIS B 213 ? O HIS X 213 A 2 3 O LEU B 214 ? O LEU X 214 N GLY B 188 ? N GLY X 188 A 3 4 O PHE B 187 ? O PHE X 187 N TYR B 43 ? N TYR X 43 A 4 5 N THR B 46 ? N THR X 46 O LEU B 76 ? O LEU X 76 A 5 6 N VAL B 75 ? N VAL X 75 O LYS B 120 ? O LYS X 120 B 1 2 N PHE B 288 ? N PHE X 288 O TYR B 302 ? O TYR X 302 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X MG 801 ? 5 'BINDING SITE FOR RESIDUE MG X 801' AC2 Software X YMP 601 ? 27 'BINDING SITE FOR RESIDUE YMP X 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ALA B 47 ? ALA X 47 . ? 1_555 ? 2 AC1 5 THR B 49 ? THR X 49 . ? 1_555 ? 3 AC1 5 TYR B 56 ? TYR X 56 . ? 1_555 ? 4 AC1 5 TYR B 101 ? TYR X 101 . ? 1_555 ? 5 AC1 5 YMP D . ? YMP X 601 . ? 1_555 ? 6 AC2 27 TYR B 43 ? TYR X 43 . ? 1_555 ? 7 AC2 27 TRP B 44 ? TRP X 44 . ? 1_555 ? 8 AC2 27 GLY B 45 ? GLY X 45 . ? 1_555 ? 9 AC2 27 THR B 46 ? THR X 46 . ? 1_555 ? 10 AC2 27 ALA B 47 ? ALA X 47 . ? 1_555 ? 11 AC2 27 HIS B 53 ? HIS X 53 . ? 1_555 ? 12 AC2 27 GLY B 55 ? GLY X 55 . ? 1_555 ? 13 AC2 27 TYR B 56 ? TYR X 56 . ? 1_555 ? 14 AC2 27 LEU B 76 ? LEU X 76 . ? 1_555 ? 15 AC2 27 ALA B 78 ? ALA X 78 . ? 1_555 ? 16 AC2 27 HIS B 81 ? HIS X 81 . ? 1_555 ? 17 AC2 27 VAL B 156 ? VAL X 156 . ? 1_555 ? 18 AC2 27 TYR B 170 ? TYR X 170 . ? 1_555 ? 19 AC2 27 GLN B 174 ? GLN X 174 . ? 1_555 ? 20 AC2 27 ASP B 177 ? ASP X 177 . ? 1_555 ? 21 AC2 27 GLN B 186 ? GLN X 186 . ? 1_555 ? 22 AC2 27 GLY B 188 ? GLY X 188 . ? 1_555 ? 23 AC2 27 GLY B 189 ? GLY X 189 . ? 1_555 ? 24 AC2 27 ASP B 191 ? ASP X 191 . ? 1_555 ? 25 AC2 27 GLN B 192 ? GLN X 192 . ? 1_555 ? 26 AC2 27 ASN B 216 ? ASN X 216 . ? 1_555 ? 27 AC2 27 PRO B 217 ? PRO X 217 . ? 1_555 ? 28 AC2 27 MET B 218 ? MET X 218 . ? 1_555 ? 29 AC2 27 VAL B 219 ? VAL X 219 . ? 1_555 ? 30 AC2 27 MG C . ? MG X 801 . ? 1_555 ? 31 AC2 27 HOH F . ? HOH X 821 . ? 1_555 ? 32 AC2 27 HOH F . ? HOH X 834 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" Y A 528 ? ? "C1'" Y A 528 ? ? N9 Y A 528 ? ? 114.09 108.50 5.59 0.70 N 2 1 CB X ASP 85 ? ? CG X ASP 85 ? ? OD2 X ASP 85 ? ? 123.86 118.30 5.56 0.90 N 3 1 CB X ASP 177 ? ? CG X ASP 177 ? ? OD2 X ASP 177 ? ? 123.99 118.30 5.69 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO X 48 ? ? -64.96 80.65 2 1 THR X 49 ? ? -110.52 -110.80 3 1 LEU X 91 ? ? 12.09 -100.19 4 1 CYS X 255 ? ? -162.69 90.58 5 1 LYS X 280 ? ? -71.95 -89.46 6 1 PHE X 281 ? ? -172.59 149.22 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 2MG 10 Y 2MG 510 ? G "2N-METHYLGUANOSINE-5'-MONOPHOSPHATE" 2 A OMG 18 Y OMG 518 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 3 A M2G 26 Y M2G 526 ? G "N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE" 4 A PSU 35 Y PSU 535 ? U "PSEUDOURIDINE-5'-MONOPHOSPHATE" 5 A 6IA 37 Y 6IA 537 ? A ? 6 A PSU 39 Y PSU 539 ? U "PSEUDOURIDINE-5'-MONOPHOSPHATE" 7 A 5MC 48 Y 5MC 548 ? C "5-METHYLCYTIDINE-5'-MONOPHOSPHATE" 8 A 5MU 54 Y 5MU 554 ? U ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; 9 A PSU 55 Y PSU 555 ? U "PSEUDOURIDINE-5'-MONOPHOSPHATE" 10 A 1MA 58 Y 1MA 558 ? A ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 1.9659 37.9452 157.1791 0.1316 0.0299 0.1034 0.0590 0.0329 -0.0035 2.9757 2.1459 2.2524 -1.3594 1.3710 -0.5641 0.0499 -0.0419 0.2734 -0.3818 -0.0259 0.0064 -0.1400 -0.2631 -0.0240 'X-RAY DIFFRACTION' 2 ? refined 18.9730 -1.7124 153.6096 0.3375 0.1965 0.3143 -0.0736 -0.0282 -0.1269 6.1595 4.9383 7.7586 -0.6236 1.1745 -1.9687 0.1391 0.2554 -0.6674 -0.3126 -0.0500 -0.0804 -0.0538 0.1863 -0.0891 'X-RAY DIFFRACTION' 3 ? refined -6.9423 11.8703 133.7603 0.8565 0.6993 0.6437 -0.0075 -0.0477 0.0582 6.1478 10.0368 1.2701 -7.8631 -3.1497 4.7739 -0.0558 0.5943 -0.2453 -0.5797 -0.1040 0.3640 0.0718 0.0342 0.1598 'X-RAY DIFFRACTION' 4 ? refined 17.4751 -2.8245 127.9050 0.5990 0.5348 0.2813 -0.0518 0.1777 -0.1281 15.2993 7.5516 12.5780 3.8536 0.5405 1.3512 -0.4418 0.9699 -0.4158 -0.6862 0.4261 -0.3073 -0.1386 0.5097 0.0156 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 X 8 B 8 X 355 B 355 ? 'X-RAY DIFFRACTION' ? 2 2 Y 501 A 1 Y 507 A 7 ? 'X-RAY DIFFRACTION' ? 3 2 Y 566 A 66 Y 576 A 76 ? 'X-RAY DIFFRACTION' ? 4 3 Y 508 A 8 Y 546 A 46 ? 'X-RAY DIFFRACTION' ? 5 4 Y 547 A 47 Y 565 A 65 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 Y H2U 517 ? A H2U 17 2 1 Y 1 Y C 532 ? A C 32 3 1 Y 1 X MET 1 ? B MET 1 4 1 Y 1 X SER 2 ? B SER 2 5 1 Y 1 X SER 3 ? B SER 3 6 1 Y 1 X ALA 4 ? B ALA 4 7 1 Y 1 X ALA 5 ? B ALA 5 8 1 Y 1 X THR 6 ? B THR 6 9 1 Y 1 X VAL 7 ? B VAL 7 10 1 Y 1 X GLN 224 ? B GLN 224 11 1 Y 1 X GLY 225 ? B GLY 225 12 1 Y 1 X GLY 226 ? B GLY 226 13 1 Y 1 X LYS 227 ? B LYS 227 14 1 Y 1 X MET 228 ? B MET 228 15 1 Y 1 X SER 229 ? B SER 229 16 1 Y 1 X ALA 230 ? B ALA 230 17 1 Y 1 X SER 231 ? B SER 231 18 1 Y 1 X ASP 232 ? B ASP 232 19 1 Y 1 X PRO 233 ? B PRO 233 20 1 Y 1 X VAL 357 ? B VAL 357 21 1 Y 1 X ALA 358 ? B ALA 358 22 1 Y 1 X THR 359 ? B THR 359 23 1 Y 1 X PRO 360 ? B PRO 360 24 1 Y 1 X GLN 361 ? B GLN 361 25 1 Y 1 X LYS 362 ? B LYS 362 26 1 Y 1 X SER 363 ? B SER 363 27 1 Y 1 X LYS 364 ? B LYS 364 28 1 Y 1 X LYS 365 ? B LYS 365 29 1 Y 1 X ALA 366 ? B ALA 366 30 1 Y 1 X LYS 367 ? B LYS 367 31 1 Y 1 X LYS 368 ? B LYS 368 32 1 Y 1 X PRO 369 ? B PRO 369 33 1 Y 1 X LYS 370 ? B LYS 370 34 1 Y 1 X ASN 371 ? B ASN 371 35 1 Y 1 X LYS 372 ? B LYS 372 36 1 Y 1 X GLY 373 ? B GLY 373 37 1 Y 1 X THR 374 ? B THR 374 38 1 Y 1 X LYS 375 ? B LYS 375 39 1 Y 1 X TYR 376 ? B TYR 376 40 1 Y 1 X PRO 377 ? B PRO 377 41 1 Y 1 X GLY 378 ? B GLY 378 42 1 Y 1 X ALA 379 ? B ALA 379 43 1 Y 1 X THR 380 ? B THR 380 44 1 Y 1 X LYS 381 ? B LYS 381 45 1 Y 1 X THR 382 ? B THR 382 46 1 Y 1 X ASN 383 ? B ASN 383 47 1 Y 1 X GLU 384 ? B GLU 384 48 1 Y 1 X ILE 385 ? B ILE 385 49 1 Y 1 X ALA 386 ? B ALA 386 50 1 Y 1 X THR 387 ? B THR 387 51 1 Y 1 X LYS 388 ? B LYS 388 52 1 Y 1 X LEU 389 ? B LEU 389 53 1 Y 1 X GLU 390 ? B GLU 390 54 1 Y 1 X GLU 391 ? B GLU 391 55 1 Y 1 X THR 392 ? B THR 392 56 1 Y 1 X LYS 393 ? B LYS 393 57 1 Y 1 X LEU 394 ? B LEU 394 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1MA P P N N 1 1MA OP1 O N N 2 1MA OP2 O N N 3 1MA OP3 O N N 4 1MA "O5'" O N N 5 1MA "C5'" C N N 6 1MA "C4'" C N R 7 1MA "O4'" O N N 8 1MA "C3'" C N S 9 1MA "O3'" O N N 10 1MA "C2'" C N R 11 1MA "O2'" O N N 12 1MA "C1'" C N R 13 1MA N9 N Y N 14 1MA C8 C Y N 15 1MA N7 N Y N 16 1MA C5 C Y N 17 1MA C6 C N N 18 1MA N6 N N N 19 1MA N1 N N N 20 1MA CM1 C N N 21 1MA C2 C N N 22 1MA N3 N N N 23 1MA C4 C Y N 24 1MA HOP2 H N N 25 1MA HOP3 H N N 26 1MA "H5'" H N N 27 1MA "H5''" H N N 28 1MA "H4'" H N N 29 1MA "H3'" H N N 30 1MA "HO3'" H N N 31 1MA "H2'" H N N 32 1MA "HO2'" H N N 33 1MA "H1'" H N N 34 1MA H8 H N N 35 1MA HN61 H N N 36 1MA HM11 H N N 37 1MA HM12 H N N 38 1MA HM13 H N N 39 1MA H2 H N N 40 2MG P P N N 41 2MG OP1 O N N 42 2MG OP2 O N N 43 2MG OP3 O N N 44 2MG "O5'" O N N 45 2MG "C5'" C N N 46 2MG "C4'" C N R 47 2MG "O4'" O N N 48 2MG "C3'" C N S 49 2MG "O3'" O N N 50 2MG "C2'" C N R 51 2MG "O2'" O N N 52 2MG "C1'" C N R 53 2MG N9 N Y N 54 2MG C8 C Y N 55 2MG N7 N Y N 56 2MG C5 C Y N 57 2MG C6 C N N 58 2MG O6 O N N 59 2MG N1 N N N 60 2MG C2 C N N 61 2MG N2 N N N 62 2MG CM2 C N N 63 2MG N3 N N N 64 2MG C4 C Y N 65 2MG HOP2 H N N 66 2MG HOP3 H N N 67 2MG "H5'" H N N 68 2MG "H5''" H N N 69 2MG "H4'" H N N 70 2MG "H3'" H N N 71 2MG "HO3'" H N N 72 2MG "H2'" H N N 73 2MG "HO2'" H N N 74 2MG "H1'" H N N 75 2MG H8 H N N 76 2MG HN1 H N N 77 2MG HN2 H N N 78 2MG HM21 H N N 79 2MG HM22 H N N 80 2MG HM23 H N N 81 5MC P P N N 82 5MC OP1 O N N 83 5MC OP2 O N N 84 5MC OP3 O N N 85 5MC "O5'" O N N 86 5MC "C5'" C N N 87 5MC "C4'" C N R 88 5MC "O4'" O N N 89 5MC "C3'" C N S 90 5MC "O3'" O N N 91 5MC "C2'" C N R 92 5MC "O2'" O N N 93 5MC "C1'" C N R 94 5MC N1 N N N 95 5MC C2 C N N 96 5MC O2 O N N 97 5MC N3 N N N 98 5MC C4 C N N 99 5MC N4 N N N 100 5MC C5 C N N 101 5MC C6 C N N 102 5MC CM5 C N N 103 5MC HOP2 H N N 104 5MC HOP3 H N N 105 5MC "H5'" H N N 106 5MC "H5''" H N N 107 5MC "H4'" H N N 108 5MC "H3'" H N N 109 5MC "HO3'" H N N 110 5MC "H2'" H N N 111 5MC "HO2'" H N N 112 5MC "H1'" H N N 113 5MC HN41 H N N 114 5MC HN42 H N N 115 5MC H6 H N N 116 5MC HM51 H N N 117 5MC HM52 H N N 118 5MC HM53 H N N 119 5MU N1 N N N 120 5MU C2 C N N 121 5MU N3 N N N 122 5MU C4 C N N 123 5MU C5 C N N 124 5MU C5M C N N 125 5MU C6 C N N 126 5MU O2 O N N 127 5MU O4 O N N 128 5MU "C1'" C N R 129 5MU "C2'" C N R 130 5MU "O2'" O N N 131 5MU "C3'" C N S 132 5MU "C4'" C N R 133 5MU "O3'" O N N 134 5MU "O4'" O N N 135 5MU "C5'" C N N 136 5MU "O5'" O N N 137 5MU P P N N 138 5MU OP1 O N N 139 5MU OP2 O N N 140 5MU OP3 O N N 141 5MU HN3 H N N 142 5MU H71 H N N 143 5MU H72 H N N 144 5MU H73 H N N 145 5MU H6 H N N 146 5MU "H1'" H N N 147 5MU "H2'" H N N 148 5MU "HO2'" H N N 149 5MU "H3'" H N N 150 5MU "H4'" H N N 151 5MU "HO3'" H N N 152 5MU "H5'" H N N 153 5MU "H5''" H N N 154 5MU HOP2 H N N 155 5MU HOP3 H N N 156 6IA OP3 O N N 157 6IA P P N N 158 6IA OP1 O N N 159 6IA OP2 O N N 160 6IA "O5'" O N N 161 6IA "C5'" C N N 162 6IA "C4'" C N R 163 6IA "O4'" O N N 164 6IA "C3'" C N S 165 6IA "O3'" O N N 166 6IA "C2'" C N R 167 6IA "O2'" O N N 168 6IA "C1'" C N R 169 6IA N9 N Y N 170 6IA C8 C Y N 171 6IA N7 N Y N 172 6IA C5 C Y N 173 6IA C6 C Y N 174 6IA N6 N N N 175 6IA N1 N Y N 176 6IA C2 C Y N 177 6IA N3 N Y N 178 6IA C4 C Y N 179 6IA C12 C N N 180 6IA C13 C N N 181 6IA C14 C N N 182 6IA C15 C N N 183 6IA C16 C N N 184 6IA HOP3 H N N 185 6IA HOP2 H N N 186 6IA "H5'" H N N 187 6IA "H5''" H N N 188 6IA "H4'" H N N 189 6IA "H3'" H N N 190 6IA "HO3'" H N N 191 6IA "H2'" H N N 192 6IA "HO2'" H N N 193 6IA "H1'" H N N 194 6IA H8 H N N 195 6IA HN6 H N N 196 6IA H2 H N N 197 6IA H121 H N N 198 6IA H122 H N N 199 6IA H131 H N N 200 6IA H132 H N N 201 6IA H14 H N N 202 6IA H151 H N N 203 6IA H152 H N N 204 6IA H153 H N N 205 6IA H161 H N N 206 6IA H162 H N N 207 6IA H163 H N N 208 A OP3 O N N 209 A P P N N 210 A OP1 O N N 211 A OP2 O N N 212 A "O5'" O N N 213 A "C5'" C N N 214 A "C4'" C N R 215 A "O4'" O N N 216 A "C3'" C N S 217 A "O3'" O N N 218 A "C2'" C N R 219 A "O2'" O N N 220 A "C1'" C N R 221 A N9 N Y N 222 A C8 C Y N 223 A N7 N Y N 224 A C5 C Y N 225 A C6 C Y N 226 A N6 N N N 227 A N1 N Y N 228 A C2 C Y N 229 A N3 N Y N 230 A C4 C Y N 231 A HOP3 H N N 232 A HOP2 H N N 233 A "H5'" H N N 234 A "H5''" H N N 235 A "H4'" H N N 236 A "H3'" H N N 237 A "HO3'" H N N 238 A "H2'" H N N 239 A "HO2'" H N N 240 A "H1'" H N N 241 A H8 H N N 242 A H61 H N N 243 A H62 H N N 244 A H2 H N N 245 ALA N N N N 246 ALA CA C N S 247 ALA C C N N 248 ALA O O N N 249 ALA CB C N N 250 ALA OXT O N N 251 ALA H H N N 252 ALA H2 H N N 253 ALA HA H N N 254 ALA HB1 H N N 255 ALA HB2 H N N 256 ALA HB3 H N N 257 ALA HXT H N N 258 ARG N N N N 259 ARG CA C N S 260 ARG C C N N 261 ARG O O N N 262 ARG CB C N N 263 ARG CG C N N 264 ARG CD C N N 265 ARG NE N N N 266 ARG CZ C N N 267 ARG NH1 N N N 268 ARG NH2 N N N 269 ARG OXT O N N 270 ARG H H N N 271 ARG H2 H N N 272 ARG HA H N N 273 ARG HB2 H N N 274 ARG HB3 H N N 275 ARG HG2 H N N 276 ARG HG3 H N N 277 ARG HD2 H N N 278 ARG HD3 H N N 279 ARG HE H N N 280 ARG HH11 H N N 281 ARG HH12 H N N 282 ARG HH21 H N N 283 ARG HH22 H N N 284 ARG HXT H N N 285 ASN N N N N 286 ASN CA C N S 287 ASN C C N N 288 ASN O O N N 289 ASN CB C N N 290 ASN CG C N N 291 ASN OD1 O N N 292 ASN ND2 N N N 293 ASN OXT O N N 294 ASN H H N N 295 ASN H2 H N N 296 ASN HA H N N 297 ASN HB2 H N N 298 ASN HB3 H N N 299 ASN HD21 H N N 300 ASN HD22 H N N 301 ASN HXT H N N 302 ASP N N N N 303 ASP CA C N S 304 ASP C C N N 305 ASP O O N N 306 ASP CB C N N 307 ASP CG C N N 308 ASP OD1 O N N 309 ASP OD2 O N N 310 ASP OXT O N N 311 ASP H H N N 312 ASP H2 H N N 313 ASP HA H N N 314 ASP HB2 H N N 315 ASP HB3 H N N 316 ASP HD2 H N N 317 ASP HXT H N N 318 C OP3 O N N 319 C P P N N 320 C OP1 O N N 321 C OP2 O N N 322 C "O5'" O N N 323 C "C5'" C N N 324 C "C4'" C N R 325 C "O4'" O N N 326 C "C3'" C N S 327 C "O3'" O N N 328 C "C2'" C N R 329 C "O2'" O N N 330 C "C1'" C N R 331 C N1 N N N 332 C C2 C N N 333 C O2 O N N 334 C N3 N N N 335 C C4 C N N 336 C N4 N N N 337 C C5 C N N 338 C C6 C N N 339 C HOP3 H N N 340 C HOP2 H N N 341 C "H5'" H N N 342 C "H5''" H N N 343 C "H4'" H N N 344 C "H3'" H N N 345 C "HO3'" H N N 346 C "H2'" H N N 347 C "HO2'" H N N 348 C "H1'" H N N 349 C H41 H N N 350 C H42 H N N 351 C H5 H N N 352 C H6 H N N 353 CYS N N N N 354 CYS CA C N R 355 CYS C C N N 356 CYS O O N N 357 CYS CB C N N 358 CYS SG S N N 359 CYS OXT O N N 360 CYS H H N N 361 CYS H2 H N N 362 CYS HA H N N 363 CYS HB2 H N N 364 CYS HB3 H N N 365 CYS HG H N N 366 CYS HXT H N N 367 G OP3 O N N 368 G P P N N 369 G OP1 O N N 370 G OP2 O N N 371 G "O5'" O N N 372 G "C5'" C N N 373 G "C4'" C N R 374 G "O4'" O N N 375 G "C3'" C N S 376 G "O3'" O N N 377 G "C2'" C N R 378 G "O2'" O N N 379 G "C1'" C N R 380 G N9 N Y N 381 G C8 C Y N 382 G N7 N Y N 383 G C5 C Y N 384 G C6 C N N 385 G O6 O N N 386 G N1 N N N 387 G C2 C N N 388 G N2 N N N 389 G N3 N N N 390 G C4 C Y N 391 G HOP3 H N N 392 G HOP2 H N N 393 G "H5'" H N N 394 G "H5''" H N N 395 G "H4'" H N N 396 G "H3'" H N N 397 G "HO3'" H N N 398 G "H2'" H N N 399 G "HO2'" H N N 400 G "H1'" H N N 401 G H8 H N N 402 G H1 H N N 403 G H21 H N N 404 G H22 H N N 405 GLN N N N N 406 GLN CA C N S 407 GLN C C N N 408 GLN O O N N 409 GLN CB C N N 410 GLN CG C N N 411 GLN CD C N N 412 GLN OE1 O N N 413 GLN NE2 N N N 414 GLN OXT O N N 415 GLN H H N N 416 GLN H2 H N N 417 GLN HA H N N 418 GLN HB2 H N N 419 GLN HB3 H N N 420 GLN HG2 H N N 421 GLN HG3 H N N 422 GLN HE21 H N N 423 GLN HE22 H N N 424 GLN HXT H N N 425 GLU N N N N 426 GLU CA C N S 427 GLU C C N N 428 GLU O O N N 429 GLU CB C N N 430 GLU CG C N N 431 GLU CD C N N 432 GLU OE1 O N N 433 GLU OE2 O N N 434 GLU OXT O N N 435 GLU H H N N 436 GLU H2 H N N 437 GLU HA H N N 438 GLU HB2 H N N 439 GLU HB3 H N N 440 GLU HG2 H N N 441 GLU HG3 H N N 442 GLU HE2 H N N 443 GLU HXT H N N 444 GLY N N N N 445 GLY CA C N N 446 GLY C C N N 447 GLY O O N N 448 GLY OXT O N N 449 GLY H H N N 450 GLY H2 H N N 451 GLY HA2 H N N 452 GLY HA3 H N N 453 GLY HXT H N N 454 H2U P P N N 455 H2U OP1 O N N 456 H2U OP2 O N N 457 H2U OP3 O N N 458 H2U "O5'" O N N 459 H2U "C5'" C N N 460 H2U "C4'" C N R 461 H2U "O4'" O N N 462 H2U "C3'" C N S 463 H2U "O3'" O N N 464 H2U "C1'" C N R 465 H2U "C2'" C N R 466 H2U "O2'" O N N 467 H2U N1 N N N 468 H2U C2 C N N 469 H2U O2 O N N 470 H2U N3 N N N 471 H2U C4 C N N 472 H2U O4 O N N 473 H2U C5 C N N 474 H2U C6 C N N 475 H2U HOP2 H N N 476 H2U HOP3 H N N 477 H2U "H5'" H N N 478 H2U "H5''" H N N 479 H2U "H4'" H N N 480 H2U "H3'" H N N 481 H2U "HO3'" H N N 482 H2U "H1'" H N N 483 H2U "H2'" H N N 484 H2U "HO2'" H N N 485 H2U HN3 H N N 486 H2U H51 H N N 487 H2U H52 H N N 488 H2U H61 H N N 489 H2U H62 H N N 490 HIS N N N N 491 HIS CA C N S 492 HIS C C N N 493 HIS O O N N 494 HIS CB C N N 495 HIS CG C Y N 496 HIS ND1 N Y N 497 HIS CD2 C Y N 498 HIS CE1 C Y N 499 HIS NE2 N Y N 500 HIS OXT O N N 501 HIS H H N N 502 HIS H2 H N N 503 HIS HA H N N 504 HIS HB2 H N N 505 HIS HB3 H N N 506 HIS HD1 H N N 507 HIS HD2 H N N 508 HIS HE1 H N N 509 HIS HE2 H N N 510 HIS HXT H N N 511 HOH O O N N 512 HOH H1 H N N 513 HOH H2 H N N 514 ILE N N N N 515 ILE CA C N S 516 ILE C C N N 517 ILE O O N N 518 ILE CB C N S 519 ILE CG1 C N N 520 ILE CG2 C N N 521 ILE CD1 C N N 522 ILE OXT O N N 523 ILE H H N N 524 ILE H2 H N N 525 ILE HA H N N 526 ILE HB H N N 527 ILE HG12 H N N 528 ILE HG13 H N N 529 ILE HG21 H N N 530 ILE HG22 H N N 531 ILE HG23 H N N 532 ILE HD11 H N N 533 ILE HD12 H N N 534 ILE HD13 H N N 535 ILE HXT H N N 536 LEU N N N N 537 LEU CA C N S 538 LEU C C N N 539 LEU O O N N 540 LEU CB C N N 541 LEU CG C N N 542 LEU CD1 C N N 543 LEU CD2 C N N 544 LEU OXT O N N 545 LEU H H N N 546 LEU H2 H N N 547 LEU HA H N N 548 LEU HB2 H N N 549 LEU HB3 H N N 550 LEU HG H N N 551 LEU HD11 H N N 552 LEU HD12 H N N 553 LEU HD13 H N N 554 LEU HD21 H N N 555 LEU HD22 H N N 556 LEU HD23 H N N 557 LEU HXT H N N 558 LYS N N N N 559 LYS CA C N S 560 LYS C C N N 561 LYS O O N N 562 LYS CB C N N 563 LYS CG C N N 564 LYS CD C N N 565 LYS CE C N N 566 LYS NZ N N N 567 LYS OXT O N N 568 LYS H H N N 569 LYS H2 H N N 570 LYS HA H N N 571 LYS HB2 H N N 572 LYS HB3 H N N 573 LYS HG2 H N N 574 LYS HG3 H N N 575 LYS HD2 H N N 576 LYS HD3 H N N 577 LYS HE2 H N N 578 LYS HE3 H N N 579 LYS HZ1 H N N 580 LYS HZ2 H N N 581 LYS HZ3 H N N 582 LYS HXT H N N 583 M2G P P N N 584 M2G OP1 O N N 585 M2G OP2 O N N 586 M2G OP3 O N N 587 M2G "O5'" O N N 588 M2G "C5'" C N N 589 M2G "C4'" C N R 590 M2G "O4'" O N N 591 M2G "C3'" C N S 592 M2G "O3'" O N N 593 M2G "C2'" C N R 594 M2G "O2'" O N N 595 M2G "C1'" C N R 596 M2G N9 N Y N 597 M2G C8 C Y N 598 M2G N7 N Y N 599 M2G C5 C Y N 600 M2G C6 C N N 601 M2G O6 O N N 602 M2G N1 N N N 603 M2G C2 C N N 604 M2G N2 N N N 605 M2G N3 N N N 606 M2G C4 C Y N 607 M2G CM1 C N N 608 M2G CM2 C N N 609 M2G HOP2 H N N 610 M2G HOP3 H N N 611 M2G "H5'" H N N 612 M2G "H5''" H N N 613 M2G "H4'" H N N 614 M2G "H3'" H N N 615 M2G "HO3'" H N N 616 M2G "H2'" H N N 617 M2G "HO2'" H N N 618 M2G "H1'" H N N 619 M2G H8 H N N 620 M2G HN1 H N N 621 M2G HM11 H N N 622 M2G HM12 H N N 623 M2G HM13 H N N 624 M2G HM21 H N N 625 M2G HM22 H N N 626 M2G HM23 H N N 627 MET N N N N 628 MET CA C N S 629 MET C C N N 630 MET O O N N 631 MET CB C N N 632 MET CG C N N 633 MET SD S N N 634 MET CE C N N 635 MET OXT O N N 636 MET H H N N 637 MET H2 H N N 638 MET HA H N N 639 MET HB2 H N N 640 MET HB3 H N N 641 MET HG2 H N N 642 MET HG3 H N N 643 MET HE1 H N N 644 MET HE2 H N N 645 MET HE3 H N N 646 MET HXT H N N 647 MG MG MG N N 648 OMG P P N N 649 OMG OP1 O N N 650 OMG OP2 O N N 651 OMG OP3 O N N 652 OMG "O5'" O N N 653 OMG "C5'" C N N 654 OMG "C4'" C N R 655 OMG "O4'" O N N 656 OMG "C3'" C N R 657 OMG "O3'" O N N 658 OMG "C2'" C N R 659 OMG "O2'" O N N 660 OMG CM2 C N N 661 OMG "C1'" C N R 662 OMG N9 N Y N 663 OMG C8 C Y N 664 OMG N7 N Y N 665 OMG C5 C Y N 666 OMG C6 C N N 667 OMG O6 O N N 668 OMG N1 N N N 669 OMG C2 C N N 670 OMG N2 N N N 671 OMG N3 N N N 672 OMG C4 C Y N 673 OMG HOP2 H N N 674 OMG HOP3 H N N 675 OMG "H5'" H N N 676 OMG "H5''" H N N 677 OMG "H4'" H N N 678 OMG "H3'" H N N 679 OMG "HO3'" H N N 680 OMG "H2'" H N N 681 OMG HM21 H N N 682 OMG HM22 H N N 683 OMG HM23 H N N 684 OMG "H1'" H N N 685 OMG H8 H N N 686 OMG HN1 H N N 687 OMG HN21 H N N 688 OMG HN22 H N N 689 PHE N N N N 690 PHE CA C N S 691 PHE C C N N 692 PHE O O N N 693 PHE CB C N N 694 PHE CG C Y N 695 PHE CD1 C Y N 696 PHE CD2 C Y N 697 PHE CE1 C Y N 698 PHE CE2 C Y N 699 PHE CZ C Y N 700 PHE OXT O N N 701 PHE H H N N 702 PHE H2 H N N 703 PHE HA H N N 704 PHE HB2 H N N 705 PHE HB3 H N N 706 PHE HD1 H N N 707 PHE HD2 H N N 708 PHE HE1 H N N 709 PHE HE2 H N N 710 PHE HZ H N N 711 PHE HXT H N N 712 PRO N N N N 713 PRO CA C N S 714 PRO C C N N 715 PRO O O N N 716 PRO CB C N N 717 PRO CG C N N 718 PRO CD C N N 719 PRO OXT O N N 720 PRO H H N N 721 PRO HA H N N 722 PRO HB2 H N N 723 PRO HB3 H N N 724 PRO HG2 H N N 725 PRO HG3 H N N 726 PRO HD2 H N N 727 PRO HD3 H N N 728 PRO HXT H N N 729 PSU N1 N N N 730 PSU C2 C N N 731 PSU N3 N N N 732 PSU C4 C N N 733 PSU C5 C N N 734 PSU C6 C N N 735 PSU O2 O N N 736 PSU O4 O N N 737 PSU "C1'" C N S 738 PSU "C2'" C N R 739 PSU "O2'" O N N 740 PSU "C3'" C N S 741 PSU "C4'" C N R 742 PSU "O3'" O N N 743 PSU "O4'" O N N 744 PSU "C5'" C N N 745 PSU "O5'" O N N 746 PSU P P N N 747 PSU OP1 O N N 748 PSU OP2 O N N 749 PSU OP3 O N N 750 PSU HN1 H N N 751 PSU HN3 H N N 752 PSU H6 H N N 753 PSU "H1'" H N N 754 PSU "H2'" H N N 755 PSU "HO2'" H N N 756 PSU "H3'" H N N 757 PSU "H4'" H N N 758 PSU "HO3'" H N N 759 PSU "H5'" H N N 760 PSU "H5''" H N N 761 PSU HOP2 H N N 762 PSU HOP3 H N N 763 SER N N N N 764 SER CA C N S 765 SER C C N N 766 SER O O N N 767 SER CB C N N 768 SER OG O N N 769 SER OXT O N N 770 SER H H N N 771 SER H2 H N N 772 SER HA H N N 773 SER HB2 H N N 774 SER HB3 H N N 775 SER HG H N N 776 SER HXT H N N 777 THR N N N N 778 THR CA C N S 779 THR C C N N 780 THR O O N N 781 THR CB C N R 782 THR OG1 O N N 783 THR CG2 C N N 784 THR OXT O N N 785 THR H H N N 786 THR H2 H N N 787 THR HA H N N 788 THR HB H N N 789 THR HG1 H N N 790 THR HG21 H N N 791 THR HG22 H N N 792 THR HG23 H N N 793 THR HXT H N N 794 TRP N N N N 795 TRP CA C N S 796 TRP C C N N 797 TRP O O N N 798 TRP CB C N N 799 TRP CG C Y N 800 TRP CD1 C Y N 801 TRP CD2 C Y N 802 TRP NE1 N Y N 803 TRP CE2 C Y N 804 TRP CE3 C Y N 805 TRP CZ2 C Y N 806 TRP CZ3 C Y N 807 TRP CH2 C Y N 808 TRP OXT O N N 809 TRP H H N N 810 TRP H2 H N N 811 TRP HA H N N 812 TRP HB2 H N N 813 TRP HB3 H N N 814 TRP HD1 H N N 815 TRP HE1 H N N 816 TRP HE3 H N N 817 TRP HZ2 H N N 818 TRP HZ3 H N N 819 TRP HH2 H N N 820 TRP HXT H N N 821 TYR N N N N 822 TYR CA C N S 823 TYR C C N N 824 TYR O O N N 825 TYR CB C N N 826 TYR CG C Y N 827 TYR CD1 C Y N 828 TYR CD2 C Y N 829 TYR CE1 C Y N 830 TYR CE2 C Y N 831 TYR CZ C Y N 832 TYR OH O N N 833 TYR OXT O N N 834 TYR H H N N 835 TYR H2 H N N 836 TYR HA H N N 837 TYR HB2 H N N 838 TYR HB3 H N N 839 TYR HD1 H N N 840 TYR HD2 H N N 841 TYR HE1 H N N 842 TYR HE2 H N N 843 TYR HH H N N 844 TYR HXT H N N 845 U OP3 O N N 846 U P P N N 847 U OP1 O N N 848 U OP2 O N N 849 U "O5'" O N N 850 U "C5'" C N N 851 U "C4'" C N R 852 U "O4'" O N N 853 U "C3'" C N S 854 U "O3'" O N N 855 U "C2'" C N R 856 U "O2'" O N N 857 U "C1'" C N R 858 U N1 N N N 859 U C2 C N N 860 U O2 O N N 861 U N3 N N N 862 U C4 C N N 863 U O4 O N N 864 U C5 C N N 865 U C6 C N N 866 U HOP3 H N N 867 U HOP2 H N N 868 U "H5'" H N N 869 U "H5''" H N N 870 U "H4'" H N N 871 U "H3'" H N N 872 U "HO3'" H N N 873 U "H2'" H N N 874 U "HO2'" H N N 875 U "H1'" H N N 876 U H3 H N N 877 U H5 H N N 878 U H6 H N N 879 VAL N N N N 880 VAL CA C N S 881 VAL C C N N 882 VAL O O N N 883 VAL CB C N N 884 VAL CG1 C N N 885 VAL CG2 C N N 886 VAL OXT O N N 887 VAL H H N N 888 VAL H2 H N N 889 VAL HA H N N 890 VAL HB H N N 891 VAL HG11 H N N 892 VAL HG12 H N N 893 VAL HG13 H N N 894 VAL HG21 H N N 895 VAL HG22 H N N 896 VAL HG23 H N N 897 VAL HXT H N N 898 YMP N N N N 899 YMP CA C N S 900 YMP CB C N N 901 YMP CG C Y N 902 YMP CD1 C Y N 903 YMP CE1 C Y N 904 YMP CZ C Y N 905 YMP OH O N N 906 YMP CE2 C Y N 907 YMP CD2 C Y N 908 YMP C C N N 909 YMP O O N N 910 YMP N3P N N N 911 YMP P P N S 912 YMP O1P O N N 913 YMP O2P O N N 914 YMP "O5'" O N N 915 YMP "C5'" C N N 916 YMP "C4'" C N R 917 YMP "O4'" O N N 918 YMP "C1'" C N R 919 YMP "C2'" C N R 920 YMP "C3'" C N S 921 YMP "O3'" O N N 922 YMP "O2'" O N N 923 YMP N9 N Y N 924 YMP C4 C Y N 925 YMP N3 N Y N 926 YMP C5 C Y N 927 YMP N7 N Y N 928 YMP C8 C Y N 929 YMP C6 C Y N 930 YMP N6 N N N 931 YMP N1 N Y N 932 YMP C2 C Y N 933 YMP HN1 H N N 934 YMP HN2 H N N 935 YMP HA H N N 936 YMP HB1 H N N 937 YMP HB2 H N N 938 YMP HD1 H N N 939 YMP HE1 H N N 940 YMP HOH H N N 941 YMP HE2 H N N 942 YMP HD2 H N N 943 YMP H3P H N N 944 YMP H2P H N N 945 YMP "H5'1" H N N 946 YMP "H5'2" H N N 947 YMP "H4'" H N N 948 YMP "H1'" H N N 949 YMP "H2'" H N N 950 YMP "H3'" H N N 951 YMP H2 H N N 952 YMP H1 H N N 953 YMP H8 H N N 954 YMP HN61 H N N 955 YMP HN62 H N N 956 YMP H3 H N N 957 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1MA P OP1 doub N N 1 1MA P OP2 sing N N 2 1MA P OP3 sing N N 3 1MA P "O5'" sing N N 4 1MA OP2 HOP2 sing N N 5 1MA OP3 HOP3 sing N N 6 1MA "O5'" "C5'" sing N N 7 1MA "C5'" "C4'" sing N N 8 1MA "C5'" "H5'" sing N N 9 1MA "C5'" "H5''" sing N N 10 1MA "C4'" "O4'" sing N N 11 1MA "C4'" "C3'" sing N N 12 1MA "C4'" "H4'" sing N N 13 1MA "O4'" "C1'" sing N N 14 1MA "C3'" "O3'" sing N N 15 1MA "C3'" "C2'" sing N N 16 1MA "C3'" "H3'" sing N N 17 1MA "O3'" "HO3'" sing N N 18 1MA "C2'" "O2'" sing N N 19 1MA "C2'" "C1'" sing N N 20 1MA "C2'" "H2'" sing N N 21 1MA "O2'" "HO2'" sing N N 22 1MA "C1'" N9 sing N N 23 1MA "C1'" "H1'" sing N N 24 1MA N9 C8 sing Y N 25 1MA N9 C4 sing Y N 26 1MA C8 N7 doub Y N 27 1MA C8 H8 sing N N 28 1MA N7 C5 sing Y N 29 1MA C5 C6 sing N N 30 1MA C5 C4 doub Y N 31 1MA C6 N6 doub N N 32 1MA C6 N1 sing N N 33 1MA N6 HN61 sing N N 34 1MA N1 CM1 sing N N 35 1MA N1 C2 sing N N 36 1MA CM1 HM11 sing N N 37 1MA CM1 HM12 sing N N 38 1MA CM1 HM13 sing N N 39 1MA C2 N3 doub N N 40 1MA C2 H2 sing N N 41 1MA N3 C4 sing N N 42 2MG P OP1 doub N N 43 2MG P OP2 sing N N 44 2MG P OP3 sing N N 45 2MG P "O5'" sing N N 46 2MG OP2 HOP2 sing N N 47 2MG OP3 HOP3 sing N N 48 2MG "O5'" "C5'" sing N N 49 2MG "C5'" "C4'" sing N N 50 2MG "C5'" "H5'" sing N N 51 2MG "C5'" "H5''" sing N N 52 2MG "C4'" "O4'" sing N N 53 2MG "C4'" "C3'" sing N N 54 2MG "C4'" "H4'" sing N N 55 2MG "O4'" "C1'" sing N N 56 2MG "C3'" "O3'" sing N N 57 2MG "C3'" "C2'" sing N N 58 2MG "C3'" "H3'" sing N N 59 2MG "O3'" "HO3'" sing N N 60 2MG "C2'" "O2'" sing N N 61 2MG "C2'" "C1'" sing N N 62 2MG "C2'" "H2'" sing N N 63 2MG "O2'" "HO2'" sing N N 64 2MG "C1'" N9 sing N N 65 2MG "C1'" "H1'" sing N N 66 2MG N9 C8 sing Y N 67 2MG N9 C4 sing Y N 68 2MG C8 N7 doub Y N 69 2MG C8 H8 sing N N 70 2MG N7 C5 sing Y N 71 2MG C5 C6 sing N N 72 2MG C5 C4 doub Y N 73 2MG C6 O6 doub N N 74 2MG C6 N1 sing N N 75 2MG N1 C2 sing N N 76 2MG N1 HN1 sing N N 77 2MG C2 N2 sing N N 78 2MG C2 N3 doub N N 79 2MG N2 CM2 sing N N 80 2MG N2 HN2 sing N N 81 2MG CM2 HM21 sing N N 82 2MG CM2 HM22 sing N N 83 2MG CM2 HM23 sing N N 84 2MG N3 C4 sing N N 85 5MC P OP1 doub N N 86 5MC P OP2 sing N N 87 5MC P OP3 sing N N 88 5MC P "O5'" sing N N 89 5MC OP2 HOP2 sing N N 90 5MC OP3 HOP3 sing N N 91 5MC "O5'" "C5'" sing N N 92 5MC "C5'" "C4'" sing N N 93 5MC "C5'" "H5'" sing N N 94 5MC "C5'" "H5''" sing N N 95 5MC "C4'" "O4'" sing N N 96 5MC "C4'" "C3'" sing N N 97 5MC "C4'" "H4'" sing N N 98 5MC "O4'" "C1'" sing N N 99 5MC "C3'" "O3'" sing N N 100 5MC "C3'" "C2'" sing N N 101 5MC "C3'" "H3'" sing N N 102 5MC "O3'" "HO3'" sing N N 103 5MC "C2'" "O2'" sing N N 104 5MC "C2'" "C1'" sing N N 105 5MC "C2'" "H2'" sing N N 106 5MC "O2'" "HO2'" sing N N 107 5MC "C1'" N1 sing N N 108 5MC "C1'" "H1'" sing N N 109 5MC N1 C2 sing N N 110 5MC N1 C6 sing N N 111 5MC C2 O2 doub N N 112 5MC C2 N3 sing N N 113 5MC N3 C4 doub N N 114 5MC C4 N4 sing N N 115 5MC C4 C5 sing N N 116 5MC N4 HN41 sing N N 117 5MC N4 HN42 sing N N 118 5MC C5 C6 doub N N 119 5MC C5 CM5 sing N N 120 5MC C6 H6 sing N N 121 5MC CM5 HM51 sing N N 122 5MC CM5 HM52 sing N N 123 5MC CM5 HM53 sing N N 124 5MU N1 C2 sing N N 125 5MU N1 C6 sing N N 126 5MU N1 "C1'" sing N N 127 5MU C2 N3 sing N N 128 5MU C2 O2 doub N N 129 5MU N3 C4 sing N N 130 5MU N3 HN3 sing N N 131 5MU C4 C5 sing N N 132 5MU C4 O4 doub N N 133 5MU C5 C5M sing N N 134 5MU C5 C6 doub N N 135 5MU C5M H71 sing N N 136 5MU C5M H72 sing N N 137 5MU C5M H73 sing N N 138 5MU C6 H6 sing N N 139 5MU "C1'" "C2'" sing N N 140 5MU "C1'" "O4'" sing N N 141 5MU "C1'" "H1'" sing N N 142 5MU "C2'" "O2'" sing N N 143 5MU "C2'" "C3'" sing N N 144 5MU "C2'" "H2'" sing N N 145 5MU "O2'" "HO2'" sing N N 146 5MU "C3'" "C4'" sing N N 147 5MU "C3'" "O3'" sing N N 148 5MU "C3'" "H3'" sing N N 149 5MU "C4'" "O4'" sing N N 150 5MU "C4'" "C5'" sing N N 151 5MU "C4'" "H4'" sing N N 152 5MU "O3'" "HO3'" sing N N 153 5MU "C5'" "O5'" sing N N 154 5MU "C5'" "H5'" sing N N 155 5MU "C5'" "H5''" sing N N 156 5MU "O5'" P sing N N 157 5MU P OP1 doub N N 158 5MU P OP2 sing N N 159 5MU P OP3 sing N N 160 5MU OP2 HOP2 sing N N 161 5MU OP3 HOP3 sing N N 162 6IA OP3 P sing N N 163 6IA OP3 HOP3 sing N N 164 6IA P OP1 doub N N 165 6IA P OP2 sing N N 166 6IA P "O5'" sing N N 167 6IA OP2 HOP2 sing N N 168 6IA "O5'" "C5'" sing N N 169 6IA "C5'" "C4'" sing N N 170 6IA "C5'" "H5'" sing N N 171 6IA "C5'" "H5''" sing N N 172 6IA "C4'" "O4'" sing N N 173 6IA "C4'" "C3'" sing N N 174 6IA "C4'" "H4'" sing N N 175 6IA "O4'" "C1'" sing N N 176 6IA "C3'" "O3'" sing N N 177 6IA "C3'" "C2'" sing N N 178 6IA "C3'" "H3'" sing N N 179 6IA "O3'" "HO3'" sing N N 180 6IA "C2'" "O2'" sing N N 181 6IA "C2'" "C1'" sing N N 182 6IA "C2'" "H2'" sing N N 183 6IA "O2'" "HO2'" sing N N 184 6IA "C1'" N9 sing N N 185 6IA "C1'" "H1'" sing N N 186 6IA N9 C8 sing Y N 187 6IA N9 C4 sing Y N 188 6IA C8 N7 doub Y N 189 6IA C8 H8 sing N N 190 6IA N7 C5 sing Y N 191 6IA C5 C6 sing Y N 192 6IA C5 C4 doub Y N 193 6IA C6 N6 sing N N 194 6IA C6 N1 doub Y N 195 6IA N6 C12 sing N N 196 6IA N6 HN6 sing N N 197 6IA N1 C2 sing Y N 198 6IA C2 N3 doub Y N 199 6IA C2 H2 sing N N 200 6IA N3 C4 sing Y N 201 6IA C12 C13 sing N N 202 6IA C12 H121 sing N N 203 6IA C12 H122 sing N N 204 6IA C13 C14 sing N N 205 6IA C13 H131 sing N N 206 6IA C13 H132 sing N N 207 6IA C14 C15 sing N N 208 6IA C14 C16 sing N N 209 6IA C14 H14 sing N N 210 6IA C15 H151 sing N N 211 6IA C15 H152 sing N N 212 6IA C15 H153 sing N N 213 6IA C16 H161 sing N N 214 6IA C16 H162 sing N N 215 6IA C16 H163 sing N N 216 A OP3 P sing N N 217 A OP3 HOP3 sing N N 218 A P OP1 doub N N 219 A P OP2 sing N N 220 A P "O5'" sing N N 221 A OP2 HOP2 sing N N 222 A "O5'" "C5'" sing N N 223 A "C5'" "C4'" sing N N 224 A "C5'" "H5'" sing N N 225 A "C5'" "H5''" sing N N 226 A "C4'" "O4'" sing N N 227 A "C4'" "C3'" sing N N 228 A "C4'" "H4'" sing N N 229 A "O4'" "C1'" sing N N 230 A "C3'" "O3'" sing N N 231 A "C3'" "C2'" sing N N 232 A "C3'" "H3'" sing N N 233 A "O3'" "HO3'" sing N N 234 A "C2'" "O2'" sing N N 235 A "C2'" "C1'" sing N N 236 A "C2'" "H2'" sing N N 237 A "O2'" "HO2'" sing N N 238 A "C1'" N9 sing N N 239 A "C1'" "H1'" sing N N 240 A N9 C8 sing Y N 241 A N9 C4 sing Y N 242 A C8 N7 doub Y N 243 A C8 H8 sing N N 244 A N7 C5 sing Y N 245 A C5 C6 sing Y N 246 A C5 C4 doub Y N 247 A C6 N6 sing N N 248 A C6 N1 doub Y N 249 A N6 H61 sing N N 250 A N6 H62 sing N N 251 A N1 C2 sing Y N 252 A C2 N3 doub Y N 253 A C2 H2 sing N N 254 A N3 C4 sing Y N 255 ALA N CA sing N N 256 ALA N H sing N N 257 ALA N H2 sing N N 258 ALA CA C sing N N 259 ALA CA CB sing N N 260 ALA CA HA sing N N 261 ALA C O doub N N 262 ALA C OXT sing N N 263 ALA CB HB1 sing N N 264 ALA CB HB2 sing N N 265 ALA CB HB3 sing N N 266 ALA OXT HXT sing N N 267 ARG N CA sing N N 268 ARG N H sing N N 269 ARG N H2 sing N N 270 ARG CA C sing N N 271 ARG CA CB sing N N 272 ARG CA HA sing N N 273 ARG C O doub N N 274 ARG C OXT sing N N 275 ARG CB CG sing N N 276 ARG CB HB2 sing N N 277 ARG CB HB3 sing N N 278 ARG CG CD sing N N 279 ARG CG HG2 sing N N 280 ARG CG HG3 sing N N 281 ARG CD NE sing N N 282 ARG CD HD2 sing N N 283 ARG CD HD3 sing N N 284 ARG NE CZ sing N N 285 ARG NE HE sing N N 286 ARG CZ NH1 sing N N 287 ARG CZ NH2 doub N N 288 ARG NH1 HH11 sing N N 289 ARG NH1 HH12 sing N N 290 ARG NH2 HH21 sing N N 291 ARG NH2 HH22 sing N N 292 ARG OXT HXT sing N N 293 ASN N CA sing N N 294 ASN N H sing N N 295 ASN N H2 sing N N 296 ASN CA C sing N N 297 ASN CA CB sing N N 298 ASN CA HA sing N N 299 ASN C O doub N N 300 ASN C OXT sing N N 301 ASN CB CG sing N N 302 ASN CB HB2 sing N N 303 ASN CB HB3 sing N N 304 ASN CG OD1 doub N N 305 ASN CG ND2 sing N N 306 ASN ND2 HD21 sing N N 307 ASN ND2 HD22 sing N N 308 ASN OXT HXT sing N N 309 ASP N CA sing N N 310 ASP N H sing N N 311 ASP N H2 sing N N 312 ASP CA C sing N N 313 ASP CA CB sing N N 314 ASP CA HA sing N N 315 ASP C O doub N N 316 ASP C OXT sing N N 317 ASP CB CG sing N N 318 ASP CB HB2 sing N N 319 ASP CB HB3 sing N N 320 ASP CG OD1 doub N N 321 ASP CG OD2 sing N N 322 ASP OD2 HD2 sing N N 323 ASP OXT HXT sing N N 324 C OP3 P sing N N 325 C OP3 HOP3 sing N N 326 C P OP1 doub N N 327 C P OP2 sing N N 328 C P "O5'" sing N N 329 C OP2 HOP2 sing N N 330 C "O5'" "C5'" sing N N 331 C "C5'" "C4'" sing N N 332 C "C5'" "H5'" sing N N 333 C "C5'" "H5''" sing N N 334 C "C4'" "O4'" sing N N 335 C "C4'" "C3'" sing N N 336 C "C4'" "H4'" sing N N 337 C "O4'" "C1'" sing N N 338 C "C3'" "O3'" sing N N 339 C "C3'" "C2'" sing N N 340 C "C3'" "H3'" sing N N 341 C "O3'" "HO3'" sing N N 342 C "C2'" "O2'" sing N N 343 C "C2'" "C1'" sing N N 344 C "C2'" "H2'" sing N N 345 C "O2'" "HO2'" sing N N 346 C "C1'" N1 sing N N 347 C "C1'" "H1'" sing N N 348 C N1 C2 sing N N 349 C N1 C6 sing N N 350 C C2 O2 doub N N 351 C C2 N3 sing N N 352 C N3 C4 doub N N 353 C C4 N4 sing N N 354 C C4 C5 sing N N 355 C N4 H41 sing N N 356 C N4 H42 sing N N 357 C C5 C6 doub N N 358 C C5 H5 sing N N 359 C C6 H6 sing N N 360 CYS N CA sing N N 361 CYS N H sing N N 362 CYS N H2 sing N N 363 CYS CA C sing N N 364 CYS CA CB sing N N 365 CYS CA HA sing N N 366 CYS C O doub N N 367 CYS C OXT sing N N 368 CYS CB SG sing N N 369 CYS CB HB2 sing N N 370 CYS CB HB3 sing N N 371 CYS SG HG sing N N 372 CYS OXT HXT sing N N 373 G OP3 P sing N N 374 G OP3 HOP3 sing N N 375 G P OP1 doub N N 376 G P OP2 sing N N 377 G P "O5'" sing N N 378 G OP2 HOP2 sing N N 379 G "O5'" "C5'" sing N N 380 G "C5'" "C4'" sing N N 381 G "C5'" "H5'" sing N N 382 G "C5'" "H5''" sing N N 383 G "C4'" "O4'" sing N N 384 G "C4'" "C3'" sing N N 385 G "C4'" "H4'" sing N N 386 G "O4'" "C1'" sing N N 387 G "C3'" "O3'" sing N N 388 G "C3'" "C2'" sing N N 389 G "C3'" "H3'" sing N N 390 G "O3'" "HO3'" sing N N 391 G "C2'" "O2'" sing N N 392 G "C2'" "C1'" sing N N 393 G "C2'" "H2'" sing N N 394 G "O2'" "HO2'" sing N N 395 G "C1'" N9 sing N N 396 G "C1'" "H1'" sing N N 397 G N9 C8 sing Y N 398 G N9 C4 sing Y N 399 G C8 N7 doub Y N 400 G C8 H8 sing N N 401 G N7 C5 sing Y N 402 G C5 C6 sing N N 403 G C5 C4 doub Y N 404 G C6 O6 doub N N 405 G C6 N1 sing N N 406 G N1 C2 sing N N 407 G N1 H1 sing N N 408 G C2 N2 sing N N 409 G C2 N3 doub N N 410 G N2 H21 sing N N 411 G N2 H22 sing N N 412 G N3 C4 sing N N 413 GLN N CA sing N N 414 GLN N H sing N N 415 GLN N H2 sing N N 416 GLN CA C sing N N 417 GLN CA CB sing N N 418 GLN CA HA sing N N 419 GLN C O doub N N 420 GLN C OXT sing N N 421 GLN CB CG sing N N 422 GLN CB HB2 sing N N 423 GLN CB HB3 sing N N 424 GLN CG CD sing N N 425 GLN CG HG2 sing N N 426 GLN CG HG3 sing N N 427 GLN CD OE1 doub N N 428 GLN CD NE2 sing N N 429 GLN NE2 HE21 sing N N 430 GLN NE2 HE22 sing N N 431 GLN OXT HXT sing N N 432 GLU N CA sing N N 433 GLU N H sing N N 434 GLU N H2 sing N N 435 GLU CA C sing N N 436 GLU CA CB sing N N 437 GLU CA HA sing N N 438 GLU C O doub N N 439 GLU C OXT sing N N 440 GLU CB CG sing N N 441 GLU CB HB2 sing N N 442 GLU CB HB3 sing N N 443 GLU CG CD sing N N 444 GLU CG HG2 sing N N 445 GLU CG HG3 sing N N 446 GLU CD OE1 doub N N 447 GLU CD OE2 sing N N 448 GLU OE2 HE2 sing N N 449 GLU OXT HXT sing N N 450 GLY N CA sing N N 451 GLY N H sing N N 452 GLY N H2 sing N N 453 GLY CA C sing N N 454 GLY CA HA2 sing N N 455 GLY CA HA3 sing N N 456 GLY C O doub N N 457 GLY C OXT sing N N 458 GLY OXT HXT sing N N 459 H2U P OP1 doub N N 460 H2U P OP2 sing N N 461 H2U P OP3 sing N N 462 H2U P "O5'" sing N N 463 H2U OP2 HOP2 sing N N 464 H2U OP3 HOP3 sing N N 465 H2U "O5'" "C5'" sing N N 466 H2U "C5'" "C4'" sing N N 467 H2U "C5'" "H5'" sing N N 468 H2U "C5'" "H5''" sing N N 469 H2U "C4'" "O4'" sing N N 470 H2U "C4'" "C3'" sing N N 471 H2U "C4'" "H4'" sing N N 472 H2U "O4'" "C1'" sing N N 473 H2U "C3'" "O3'" sing N N 474 H2U "C3'" "C2'" sing N N 475 H2U "C3'" "H3'" sing N N 476 H2U "O3'" "HO3'" sing N N 477 H2U "C1'" "C2'" sing N N 478 H2U "C1'" N1 sing N N 479 H2U "C1'" "H1'" sing N N 480 H2U "C2'" "O2'" sing N N 481 H2U "C2'" "H2'" sing N N 482 H2U "O2'" "HO2'" sing N N 483 H2U N1 C2 sing N N 484 H2U N1 C6 sing N N 485 H2U C2 O2 doub N N 486 H2U C2 N3 sing N N 487 H2U N3 C4 sing N N 488 H2U N3 HN3 sing N N 489 H2U C4 O4 doub N N 490 H2U C4 C5 sing N N 491 H2U C5 C6 sing N N 492 H2U C5 H51 sing N N 493 H2U C5 H52 sing N N 494 H2U C6 H61 sing N N 495 H2U C6 H62 sing N N 496 HIS N CA sing N N 497 HIS N H sing N N 498 HIS N H2 sing N N 499 HIS CA C sing N N 500 HIS CA CB sing N N 501 HIS CA HA sing N N 502 HIS C O doub N N 503 HIS C OXT sing N N 504 HIS CB CG sing N N 505 HIS CB HB2 sing N N 506 HIS CB HB3 sing N N 507 HIS CG ND1 sing Y N 508 HIS CG CD2 doub Y N 509 HIS ND1 CE1 doub Y N 510 HIS ND1 HD1 sing N N 511 HIS CD2 NE2 sing Y N 512 HIS CD2 HD2 sing N N 513 HIS CE1 NE2 sing Y N 514 HIS CE1 HE1 sing N N 515 HIS NE2 HE2 sing N N 516 HIS OXT HXT sing N N 517 HOH O H1 sing N N 518 HOH O H2 sing N N 519 ILE N CA sing N N 520 ILE N H sing N N 521 ILE N H2 sing N N 522 ILE CA C sing N N 523 ILE CA CB sing N N 524 ILE CA HA sing N N 525 ILE C O doub N N 526 ILE C OXT sing N N 527 ILE CB CG1 sing N N 528 ILE CB CG2 sing N N 529 ILE CB HB sing N N 530 ILE CG1 CD1 sing N N 531 ILE CG1 HG12 sing N N 532 ILE CG1 HG13 sing N N 533 ILE CG2 HG21 sing N N 534 ILE CG2 HG22 sing N N 535 ILE CG2 HG23 sing N N 536 ILE CD1 HD11 sing N N 537 ILE CD1 HD12 sing N N 538 ILE CD1 HD13 sing N N 539 ILE OXT HXT sing N N 540 LEU N CA sing N N 541 LEU N H sing N N 542 LEU N H2 sing N N 543 LEU CA C sing N N 544 LEU CA CB sing N N 545 LEU CA HA sing N N 546 LEU C O doub N N 547 LEU C OXT sing N N 548 LEU CB CG sing N N 549 LEU CB HB2 sing N N 550 LEU CB HB3 sing N N 551 LEU CG CD1 sing N N 552 LEU CG CD2 sing N N 553 LEU CG HG sing N N 554 LEU CD1 HD11 sing N N 555 LEU CD1 HD12 sing N N 556 LEU CD1 HD13 sing N N 557 LEU CD2 HD21 sing N N 558 LEU CD2 HD22 sing N N 559 LEU CD2 HD23 sing N N 560 LEU OXT HXT sing N N 561 LYS N CA sing N N 562 LYS N H sing N N 563 LYS N H2 sing N N 564 LYS CA C sing N N 565 LYS CA CB sing N N 566 LYS CA HA sing N N 567 LYS C O doub N N 568 LYS C OXT sing N N 569 LYS CB CG sing N N 570 LYS CB HB2 sing N N 571 LYS CB HB3 sing N N 572 LYS CG CD sing N N 573 LYS CG HG2 sing N N 574 LYS CG HG3 sing N N 575 LYS CD CE sing N N 576 LYS CD HD2 sing N N 577 LYS CD HD3 sing N N 578 LYS CE NZ sing N N 579 LYS CE HE2 sing N N 580 LYS CE HE3 sing N N 581 LYS NZ HZ1 sing N N 582 LYS NZ HZ2 sing N N 583 LYS NZ HZ3 sing N N 584 LYS OXT HXT sing N N 585 M2G P OP1 doub N N 586 M2G P OP2 sing N N 587 M2G P OP3 sing N N 588 M2G P "O5'" sing N N 589 M2G OP2 HOP2 sing N N 590 M2G OP3 HOP3 sing N N 591 M2G "O5'" "C5'" sing N N 592 M2G "C5'" "C4'" sing N N 593 M2G "C5'" "H5'" sing N N 594 M2G "C5'" "H5''" sing N N 595 M2G "C4'" "O4'" sing N N 596 M2G "C4'" "C3'" sing N N 597 M2G "C4'" "H4'" sing N N 598 M2G "O4'" "C1'" sing N N 599 M2G "C3'" "O3'" sing N N 600 M2G "C3'" "C2'" sing N N 601 M2G "C3'" "H3'" sing N N 602 M2G "O3'" "HO3'" sing N N 603 M2G "C2'" "O2'" sing N N 604 M2G "C2'" "C1'" sing N N 605 M2G "C2'" "H2'" sing N N 606 M2G "O2'" "HO2'" sing N N 607 M2G "C1'" N9 sing N N 608 M2G "C1'" "H1'" sing N N 609 M2G N9 C8 sing Y N 610 M2G N9 C4 sing Y N 611 M2G C8 N7 doub Y N 612 M2G C8 H8 sing N N 613 M2G N7 C5 sing Y N 614 M2G C5 C6 sing N N 615 M2G C5 C4 doub Y N 616 M2G C6 O6 doub N N 617 M2G C6 N1 sing N N 618 M2G N1 C2 sing N N 619 M2G N1 HN1 sing N N 620 M2G C2 N2 sing N N 621 M2G C2 N3 doub N N 622 M2G N2 CM1 sing N N 623 M2G N2 CM2 sing N N 624 M2G N3 C4 sing N N 625 M2G CM1 HM11 sing N N 626 M2G CM1 HM12 sing N N 627 M2G CM1 HM13 sing N N 628 M2G CM2 HM21 sing N N 629 M2G CM2 HM22 sing N N 630 M2G CM2 HM23 sing N N 631 MET N CA sing N N 632 MET N H sing N N 633 MET N H2 sing N N 634 MET CA C sing N N 635 MET CA CB sing N N 636 MET CA HA sing N N 637 MET C O doub N N 638 MET C OXT sing N N 639 MET CB CG sing N N 640 MET CB HB2 sing N N 641 MET CB HB3 sing N N 642 MET CG SD sing N N 643 MET CG HG2 sing N N 644 MET CG HG3 sing N N 645 MET SD CE sing N N 646 MET CE HE1 sing N N 647 MET CE HE2 sing N N 648 MET CE HE3 sing N N 649 MET OXT HXT sing N N 650 OMG P OP1 doub N N 651 OMG P OP2 sing N N 652 OMG P OP3 sing N N 653 OMG P "O5'" sing N N 654 OMG OP2 HOP2 sing N N 655 OMG OP3 HOP3 sing N N 656 OMG "O5'" "C5'" sing N N 657 OMG "C5'" "C4'" sing N N 658 OMG "C5'" "H5'" sing N N 659 OMG "C5'" "H5''" sing N N 660 OMG "C4'" "O4'" sing N N 661 OMG "C4'" "C3'" sing N N 662 OMG "C4'" "H4'" sing N N 663 OMG "O4'" "C1'" sing N N 664 OMG "C3'" "O3'" sing N N 665 OMG "C3'" "C2'" sing N N 666 OMG "C3'" "H3'" sing N N 667 OMG "O3'" "HO3'" sing N N 668 OMG "C2'" "O2'" sing N N 669 OMG "C2'" "C1'" sing N N 670 OMG "C2'" "H2'" sing N N 671 OMG "O2'" CM2 sing N N 672 OMG CM2 HM21 sing N N 673 OMG CM2 HM22 sing N N 674 OMG CM2 HM23 sing N N 675 OMG "C1'" N9 sing N N 676 OMG "C1'" "H1'" sing N N 677 OMG N9 C8 sing Y N 678 OMG N9 C4 sing Y N 679 OMG C8 N7 doub Y N 680 OMG C8 H8 sing N N 681 OMG N7 C5 sing Y N 682 OMG C5 C6 sing N N 683 OMG C5 C4 doub Y N 684 OMG C6 O6 doub N N 685 OMG C6 N1 sing N N 686 OMG N1 C2 sing N N 687 OMG N1 HN1 sing N N 688 OMG C2 N2 sing N N 689 OMG C2 N3 doub N N 690 OMG N2 HN21 sing N N 691 OMG N2 HN22 sing N N 692 OMG N3 C4 sing N N 693 PHE N CA sing N N 694 PHE N H sing N N 695 PHE N H2 sing N N 696 PHE CA C sing N N 697 PHE CA CB sing N N 698 PHE CA HA sing N N 699 PHE C O doub N N 700 PHE C OXT sing N N 701 PHE CB CG sing N N 702 PHE CB HB2 sing N N 703 PHE CB HB3 sing N N 704 PHE CG CD1 doub Y N 705 PHE CG CD2 sing Y N 706 PHE CD1 CE1 sing Y N 707 PHE CD1 HD1 sing N N 708 PHE CD2 CE2 doub Y N 709 PHE CD2 HD2 sing N N 710 PHE CE1 CZ doub Y N 711 PHE CE1 HE1 sing N N 712 PHE CE2 CZ sing Y N 713 PHE CE2 HE2 sing N N 714 PHE CZ HZ sing N N 715 PHE OXT HXT sing N N 716 PRO N CA sing N N 717 PRO N CD sing N N 718 PRO N H sing N N 719 PRO CA C sing N N 720 PRO CA CB sing N N 721 PRO CA HA sing N N 722 PRO C O doub N N 723 PRO C OXT sing N N 724 PRO CB CG sing N N 725 PRO CB HB2 sing N N 726 PRO CB HB3 sing N N 727 PRO CG CD sing N N 728 PRO CG HG2 sing N N 729 PRO CG HG3 sing N N 730 PRO CD HD2 sing N N 731 PRO CD HD3 sing N N 732 PRO OXT HXT sing N N 733 PSU N1 C2 sing N N 734 PSU N1 C6 sing N N 735 PSU N1 HN1 sing N N 736 PSU C2 N3 sing N N 737 PSU C2 O2 doub N N 738 PSU N3 C4 sing N N 739 PSU N3 HN3 sing N N 740 PSU C4 C5 sing N N 741 PSU C4 O4 doub N N 742 PSU C5 C6 doub N N 743 PSU C5 "C1'" sing N N 744 PSU C6 H6 sing N N 745 PSU "C1'" "C2'" sing N N 746 PSU "C1'" "O4'" sing N N 747 PSU "C1'" "H1'" sing N N 748 PSU "C2'" "O2'" sing N N 749 PSU "C2'" "C3'" sing N N 750 PSU "C2'" "H2'" sing N N 751 PSU "O2'" "HO2'" sing N N 752 PSU "C3'" "C4'" sing N N 753 PSU "C3'" "O3'" sing N N 754 PSU "C3'" "H3'" sing N N 755 PSU "C4'" "O4'" sing N N 756 PSU "C4'" "C5'" sing N N 757 PSU "C4'" "H4'" sing N N 758 PSU "O3'" "HO3'" sing N N 759 PSU "C5'" "O5'" sing N N 760 PSU "C5'" "H5'" sing N N 761 PSU "C5'" "H5''" sing N N 762 PSU "O5'" P sing N N 763 PSU P OP1 doub N N 764 PSU P OP2 sing N N 765 PSU P OP3 sing N N 766 PSU OP2 HOP2 sing N N 767 PSU OP3 HOP3 sing N N 768 SER N CA sing N N 769 SER N H sing N N 770 SER N H2 sing N N 771 SER CA C sing N N 772 SER CA CB sing N N 773 SER CA HA sing N N 774 SER C O doub N N 775 SER C OXT sing N N 776 SER CB OG sing N N 777 SER CB HB2 sing N N 778 SER CB HB3 sing N N 779 SER OG HG sing N N 780 SER OXT HXT sing N N 781 THR N CA sing N N 782 THR N H sing N N 783 THR N H2 sing N N 784 THR CA C sing N N 785 THR CA CB sing N N 786 THR CA HA sing N N 787 THR C O doub N N 788 THR C OXT sing N N 789 THR CB OG1 sing N N 790 THR CB CG2 sing N N 791 THR CB HB sing N N 792 THR OG1 HG1 sing N N 793 THR CG2 HG21 sing N N 794 THR CG2 HG22 sing N N 795 THR CG2 HG23 sing N N 796 THR OXT HXT sing N N 797 TRP N CA sing N N 798 TRP N H sing N N 799 TRP N H2 sing N N 800 TRP CA C sing N N 801 TRP CA CB sing N N 802 TRP CA HA sing N N 803 TRP C O doub N N 804 TRP C OXT sing N N 805 TRP CB CG sing N N 806 TRP CB HB2 sing N N 807 TRP CB HB3 sing N N 808 TRP CG CD1 doub Y N 809 TRP CG CD2 sing Y N 810 TRP CD1 NE1 sing Y N 811 TRP CD1 HD1 sing N N 812 TRP CD2 CE2 doub Y N 813 TRP CD2 CE3 sing Y N 814 TRP NE1 CE2 sing Y N 815 TRP NE1 HE1 sing N N 816 TRP CE2 CZ2 sing Y N 817 TRP CE3 CZ3 doub Y N 818 TRP CE3 HE3 sing N N 819 TRP CZ2 CH2 doub Y N 820 TRP CZ2 HZ2 sing N N 821 TRP CZ3 CH2 sing Y N 822 TRP CZ3 HZ3 sing N N 823 TRP CH2 HH2 sing N N 824 TRP OXT HXT sing N N 825 TYR N CA sing N N 826 TYR N H sing N N 827 TYR N H2 sing N N 828 TYR CA C sing N N 829 TYR CA CB sing N N 830 TYR CA HA sing N N 831 TYR C O doub N N 832 TYR C OXT sing N N 833 TYR CB CG sing N N 834 TYR CB HB2 sing N N 835 TYR CB HB3 sing N N 836 TYR CG CD1 doub Y N 837 TYR CG CD2 sing Y N 838 TYR CD1 CE1 sing Y N 839 TYR CD1 HD1 sing N N 840 TYR CD2 CE2 doub Y N 841 TYR CD2 HD2 sing N N 842 TYR CE1 CZ doub Y N 843 TYR CE1 HE1 sing N N 844 TYR CE2 CZ sing Y N 845 TYR CE2 HE2 sing N N 846 TYR CZ OH sing N N 847 TYR OH HH sing N N 848 TYR OXT HXT sing N N 849 U OP3 P sing N N 850 U OP3 HOP3 sing N N 851 U P OP1 doub N N 852 U P OP2 sing N N 853 U P "O5'" sing N N 854 U OP2 HOP2 sing N N 855 U "O5'" "C5'" sing N N 856 U "C5'" "C4'" sing N N 857 U "C5'" "H5'" sing N N 858 U "C5'" "H5''" sing N N 859 U "C4'" "O4'" sing N N 860 U "C4'" "C3'" sing N N 861 U "C4'" "H4'" sing N N 862 U "O4'" "C1'" sing N N 863 U "C3'" "O3'" sing N N 864 U "C3'" "C2'" sing N N 865 U "C3'" "H3'" sing N N 866 U "O3'" "HO3'" sing N N 867 U "C2'" "O2'" sing N N 868 U "C2'" "C1'" sing N N 869 U "C2'" "H2'" sing N N 870 U "O2'" "HO2'" sing N N 871 U "C1'" N1 sing N N 872 U "C1'" "H1'" sing N N 873 U N1 C2 sing N N 874 U N1 C6 sing N N 875 U C2 O2 doub N N 876 U C2 N3 sing N N 877 U N3 C4 sing N N 878 U N3 H3 sing N N 879 U C4 O4 doub N N 880 U C4 C5 sing N N 881 U C5 C6 doub N N 882 U C5 H5 sing N N 883 U C6 H6 sing N N 884 VAL N CA sing N N 885 VAL N H sing N N 886 VAL N H2 sing N N 887 VAL CA C sing N N 888 VAL CA CB sing N N 889 VAL CA HA sing N N 890 VAL C O doub N N 891 VAL C OXT sing N N 892 VAL CB CG1 sing N N 893 VAL CB CG2 sing N N 894 VAL CB HB sing N N 895 VAL CG1 HG11 sing N N 896 VAL CG1 HG12 sing N N 897 VAL CG1 HG13 sing N N 898 VAL CG2 HG21 sing N N 899 VAL CG2 HG22 sing N N 900 VAL CG2 HG23 sing N N 901 VAL OXT HXT sing N N 902 YMP N CA sing N N 903 YMP N HN1 sing N N 904 YMP N HN2 sing N N 905 YMP CA CB sing N N 906 YMP CA C sing N N 907 YMP CA HA sing N N 908 YMP CB CG sing N N 909 YMP CB HB1 sing N N 910 YMP CB HB2 sing N N 911 YMP CG CD1 doub Y N 912 YMP CG CD2 sing Y N 913 YMP CD1 CE1 sing Y N 914 YMP CD1 HD1 sing N N 915 YMP CE1 CZ doub Y N 916 YMP CE1 HE1 sing N N 917 YMP CZ OH sing N N 918 YMP CZ CE2 sing Y N 919 YMP OH HOH sing N N 920 YMP CE2 CD2 doub Y N 921 YMP CE2 HE2 sing N N 922 YMP CD2 HD2 sing N N 923 YMP C O doub N N 924 YMP C N3P sing N N 925 YMP N3P P sing N N 926 YMP N3P H3P sing N N 927 YMP P O1P doub N N 928 YMP P O2P sing N N 929 YMP P "O5'" sing N N 930 YMP O2P H2P sing N N 931 YMP "O5'" "C5'" sing N N 932 YMP "C5'" "C4'" sing N N 933 YMP "C5'" "H5'1" sing N N 934 YMP "C5'" "H5'2" sing N N 935 YMP "C4'" "O4'" sing N N 936 YMP "C4'" "C3'" sing N N 937 YMP "C4'" "H4'" sing N N 938 YMP "O4'" "C1'" sing N N 939 YMP "C1'" "C2'" sing N N 940 YMP "C1'" N9 sing N N 941 YMP "C1'" "H1'" sing N N 942 YMP "C2'" "C3'" sing N N 943 YMP "C2'" "O2'" sing N N 944 YMP "C2'" "H2'" sing N N 945 YMP "C3'" "O3'" sing N N 946 YMP "C3'" "H3'" sing N N 947 YMP "O3'" H2 sing N N 948 YMP "O2'" H1 sing N N 949 YMP N9 C4 sing Y N 950 YMP N9 C8 sing Y N 951 YMP C4 N3 sing Y N 952 YMP C4 C5 doub Y N 953 YMP N3 C2 doub Y N 954 YMP C5 N7 sing Y N 955 YMP C5 C6 sing Y N 956 YMP N7 C8 doub Y N 957 YMP C8 H8 sing N N 958 YMP C6 N6 sing N N 959 YMP C6 N1 doub Y N 960 YMP N6 HN61 sing N N 961 YMP N6 HN62 sing N N 962 YMP N1 C2 sing Y N 963 YMP C2 H3 sing N N 964 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2DLC 'double helix' 2DLC 'a-form double helix' 2DLC 'parallel strands' 2DLC 'hairpin loop' 2DLC 'mismatched base pair' 2DLC 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 A G 72 1_555 0.025 -0.075 -0.111 22.263 -27.180 1.580 1 Y_C501:G572_Y Y 501 ? Y 572 ? 19 1 1 A U 2 1_555 A A 71 1_555 -0.207 -0.189 0.318 -4.582 -15.582 0.461 2 Y_U502:A571_Y Y 502 ? Y 571 ? 20 1 1 A C 3 1_555 A G 70 1_555 0.306 -0.082 0.137 0.935 -13.299 1.525 3 Y_C503:G570_Y Y 503 ? Y 570 ? 19 1 1 A U 4 1_555 A G 69 1_555 2.476 -0.531 -0.023 0.875 -13.600 4.161 4 Y_U504:G569_Y Y 504 ? Y 569 ? 28 1 1 A C 5 1_555 A G 68 1_555 0.027 -0.245 -0.056 2.921 -8.761 -4.354 5 Y_C505:G568_Y Y 505 ? Y 568 ? 19 1 1 A G 6 1_555 A C 67 1_555 -0.328 -0.168 -0.428 -9.055 -10.525 2.769 6 Y_G506:C567_Y Y 506 ? Y 567 ? 19 1 1 A G 7 1_555 A C 66 1_555 -0.205 0.321 -0.307 -10.248 -5.461 8.131 7 Y_G507:C566_Y Y 507 ? Y 566 ? ? 1 1 A G 49 1_555 A C 65 1_555 -0.817 -0.222 0.079 -8.662 -8.407 1.448 8 Y_G549:C565_Y Y 549 ? Y 565 ? 19 1 1 A G 50 1_555 A C 64 1_555 -0.225 -0.268 0.042 -8.273 -9.156 -0.797 9 Y_G550:C564_Y Y 550 ? Y 564 ? 19 1 1 A G 51 1_555 A C 63 1_555 -0.449 -0.391 -0.231 -6.251 -15.578 -2.481 10 Y_G551:C563_Y Y 551 ? Y 563 ? 19 1 1 A C 52 1_555 A G 62 1_555 0.579 -0.057 0.042 2.048 -11.813 5.652 11 Y_C552:G562_Y Y 552 ? Y 562 ? 19 1 1 A G 53 1_555 A C 61 1_555 -0.192 -0.209 -0.038 -13.529 -11.329 -2.482 12 Y_G553:C561_Y Y 553 ? Y 561 ? 19 1 1 A 5MU 54 1_555 A 1MA 58 1_555 4.104 -0.998 0.607 -11.429 7.501 -108.516 13 Y_5MU554:1MA558_Y Y 554 ? Y 558 ? 24 4 1 A PSU 55 1_555 A OMG 18 1_555 0.969 -5.152 0.659 15.195 10.569 -91.067 14 Y_PSU555:OMG518_Y Y 555 ? Y 518 ? ? 2 1 A U 42 1_555 A A 28 1_555 3.064 -0.380 -0.423 -10.296 1.914 -3.080 15 Y_U542:A528_Y Y 542 ? Y 528 ? ? ? 1 A G 43 1_555 A C 27 1_555 -0.049 0.090 0.534 -15.102 -30.851 -1.505 16 Y_G543:C527_Y Y 543 ? Y 527 ? 19 1 1 A A 44 1_555 A M2G 26 1_555 -0.438 1.653 0.271 -25.132 -17.113 -21.413 17 Y_A544:M2G526_Y Y 544 ? Y 526 ? 8 ? 1 A 2MG 10 1_555 A C 25 1_555 -0.969 -0.179 -0.424 -0.794 -3.030 4.395 18 Y_2MG510:C525_Y Y 510 ? Y 525 ? 19 1 1 A C 11 1_555 A G 24 1_555 0.215 0.223 -0.604 3.666 -8.897 7.958 19 Y_C511:G524_Y Y 511 ? Y 524 ? 19 1 1 A C 12 1_555 A G 23 1_555 0.861 -0.105 0.258 -12.756 -6.951 4.724 20 Y_C512:G523_Y Y 512 ? Y 523 ? 19 1 1 A A 13 1_555 A A 22 1_555 7.041 -4.288 -0.129 -0.729 -11.525 -14.089 21 Y_A513:A522_Y Y 513 ? Y 522 ? ? 6 1 A A 14 1_555 A U 8 1_555 -4.146 -1.647 0.476 7.890 15.654 -92.966 22 Y_A514:U508_Y Y 514 ? Y 508 ? 24 4 1 A G 15 1_555 A 5MC 48 1_555 0.082 3.775 0.069 4.258 10.046 160.308 23 Y_G515:5MC548_Y Y 515 ? Y 548 ? 22 2 1 A G 19 1_555 A C 56 1_555 0.567 0.302 -0.241 27.242 -32.440 -1.941 24 Y_G519:C556_Y Y 519 ? Y 556 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 A G 72 1_555 A U 2 1_555 A A 71 1_555 -0.332 -1.722 3.736 -4.864 11.937 37.293 -4.073 -0.126 3.081 18.021 7.343 39.383 1 YY_C501U502:A571G572_YY Y 501 ? Y 572 ? Y 502 ? Y 571 ? 1 A U 2 1_555 A A 71 1_555 A C 3 1_555 A G 70 1_555 -0.170 -1.536 3.051 1.064 2.505 31.231 -3.274 0.497 2.914 4.642 -1.971 31.346 2 YY_U502C503:G570A571_YY Y 502 ? Y 571 ? Y 503 ? Y 570 ? 1 A C 3 1_555 A G 70 1_555 A U 4 1_555 A G 69 1_555 0.403 -1.263 3.212 3.354 4.364 40.982 -2.242 -0.222 3.089 6.199 -4.764 41.334 3 YY_C503U504:G569G570_YY Y 503 ? Y 570 ? Y 504 ? Y 569 ? 1 A U 4 1_555 A G 69 1_555 A C 5 1_555 A G 68 1_555 -0.305 -1.994 3.011 3.686 6.101 20.628 -7.244 2.000 2.247 16.417 -9.920 21.812 4 YY_U504C505:G568G569_YY Y 504 ? Y 569 ? Y 505 ? Y 568 ? 1 A C 5 1_555 A G 68 1_555 A G 6 1_555 A C 67 1_555 1.025 -2.065 3.605 3.800 11.395 27.595 -6.329 -1.194 2.676 22.583 -7.530 30.049 5 YY_C505G506:C567G568_YY Y 505 ? Y 568 ? Y 506 ? Y 567 ? 1 A G 6 1_555 A C 67 1_555 A G 7 1_555 A C 66 1_555 0.151 -1.526 3.290 0.965 11.025 32.177 -4.257 -0.115 2.643 19.196 -1.681 33.980 6 YY_G506G507:C566C567_YY Y 506 ? Y 567 ? Y 507 ? Y 566 ? 1 A G 7 1_555 A C 66 1_555 A G 49 1_555 A C 65 1_555 -0.226 -2.046 3.171 0.509 3.577 32.313 -4.240 0.487 2.930 6.402 -0.911 32.509 7 YY_G507G549:C565C566_YY Y 507 ? Y 566 ? Y 549 ? Y 565 ? 1 A G 49 1_555 A C 65 1_555 A G 50 1_555 A C 64 1_555 -0.441 -2.125 3.188 1.687 1.041 33.149 -3.886 1.043 3.096 1.822 -2.953 33.206 8 YY_G549G550:C564C565_YY Y 549 ? Y 565 ? Y 550 ? Y 564 ? 1 A G 50 1_555 A C 64 1_555 A G 51 1_555 A C 63 1_555 0.216 -1.500 3.138 3.825 8.280 30.262 -4.148 0.246 2.652 15.426 -7.126 31.576 9 YY_G550G551:C563C564_YY Y 550 ? Y 564 ? Y 551 ? Y 563 ? 1 A G 51 1_555 A C 63 1_555 A C 52 1_555 A G 62 1_555 0.446 -1.362 3.049 -2.046 3.217 36.552 -2.560 -0.962 2.894 5.111 3.251 36.743 10 YY_G551C552:G562C563_YY Y 551 ? Y 563 ? Y 552 ? Y 562 ? 1 A C 52 1_555 A G 62 1_555 A G 53 1_555 A C 61 1_555 0.669 -2.177 3.459 4.049 9.877 27.571 -6.290 -0.485 2.610 19.809 -8.120 29.528 11 YY_C552G553:C561G562_YY Y 552 ? Y 562 ? Y 553 ? Y 561 ? 1 A G 53 1_555 A C 61 1_555 A 5MU 54 1_555 A 1MA 58 1_555 -2.666 -2.507 3.175 -2.153 -0.494 88.811 -1.781 1.861 3.236 -0.353 1.538 88.833 12 YY_G5535MU554:1MA558C561_YY Y 553 ? Y 561 ? Y 554 ? Y 558 ? 1 A 5MU 54 1_555 A 1MA 58 1_555 A PSU 55 1_555 A OMG 18 1_555 2.247 -2.607 3.324 7.243 3.694 40.750 -4.087 -2.368 3.419 5.241 -10.278 41.519 13 YY_5MU554PSU555:OMG5181MA558_YY Y 554 ? Y 558 ? Y 555 ? Y 518 ? 1 A U 42 1_555 A A 28 1_555 A G 43 1_555 A C 27 1_555 0.443 -2.138 2.914 7.158 25.726 22.355 -6.065 -0.054 0.419 48.902 -13.606 34.694 14 YY_U542G543:C527A528_YY Y 542 ? Y 528 ? Y 543 ? Y 527 ? 1 A G 43 1_555 A C 27 1_555 A A 44 1_555 A M2G 26 1_555 -1.028 -1.805 3.105 1.766 4.716 33.955 -3.728 1.993 2.782 8.021 -3.003 34.316 15 YY_G543A544:M2G526C527_YY Y 543 ? Y 527 ? Y 544 ? Y 526 ? 1 A A 44 1_555 A M2G 26 1_555 A 2MG 10 1_555 A C 25 1_555 -3.213 -3.009 3.032 18.411 7.623 64.070 -2.963 3.472 1.824 7.009 -16.930 66.781 16 YY_A5442MG510:C525M2G526_YY Y 544 ? Y 526 ? Y 510 ? Y 525 ? 1 A 2MG 10 1_555 A C 25 1_555 A C 11 1_555 A G 24 1_555 -0.136 -1.892 3.153 0.981 0.719 35.240 -3.225 0.363 3.110 1.187 -1.620 35.260 17 YY_2MG510C511:G524C525_YY Y 510 ? Y 525 ? Y 511 ? Y 524 ? 1 A C 11 1_555 A G 24 1_555 A C 12 1_555 A G 23 1_555 -0.020 -1.987 3.538 -2.078 13.932 36.973 -4.550 -0.210 2.646 21.055 3.141 39.478 18 YY_C511C512:G523G524_YY Y 511 ? Y 524 ? Y 512 ? Y 523 ? 1 A C 12 1_555 A G 23 1_555 A A 13 1_555 A A 22 1_555 -0.554 -1.427 3.100 4.482 0.243 47.079 -1.798 1.034 3.031 0.304 -5.596 47.280 19 YY_C512A513:A522G523_YY Y 512 ? Y 523 ? Y 513 ? Y 522 ? 1 A A 13 1_555 A A 22 1_555 A A 14 1_555 A U 8 1_555 -0.635 -2.366 3.100 0.834 -0.644 47.470 -2.889 0.852 3.119 -0.800 -1.036 47.481 20 YY_A513A514:U508A522_YY Y 513 ? Y 522 ? Y 514 ? Y 508 ? 1 A A 14 1_555 A U 8 1_555 A G 15 1_555 A 5MC 48 1_555 1.969 -3.105 3.209 2.690 7.113 -71.099 2.414 1.779 3.399 -6.099 2.307 -71.451 21 YY_A514G515:5MC548U508_YY Y 514 ? Y 508 ? Y 515 ? Y 548 ? # _atom_sites.entry_id 2DLC _atom_sites.fract_transf_matrix[1][1] 0.015661 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015661 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003027 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_