HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-APR-06 2DLX TITLE SOLUTION STRUCTURE OF THE UAS DOMAIN OF HUMAN UBX DOMAIN-CONTAINING TITLE 2 PROTEIN 7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBX DOMAIN-CONTAINING PROTEIN 7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UAS DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBXD7, KIAA0794; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050719-12; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS UAS DOMAIN, UBX DOMAIN-CONTAINING PROTEIN 7, PROTEIN KIAA0794, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.P.ZHANG,T.NAGASIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DLX 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DLX 1 VERSN REVDAT 1 20-OCT-06 2DLX 0 JRNL AUTH H.P.ZHANG,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE UAS DOMAIN OF HUMAN UBX JRNL TITL 2 DOMAIN-CONTAINING PROTEIN 7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTENT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DLX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025568. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.45 MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL(PH7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02%NAN3, REMARK 210 90%H2O; 10%D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.04, REMARK 210 KUJIRA 0.93191, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SPECTROMETER_ID 1 FOR 3D_15N_SEPARATED_NOESY; REMARK 210 SPECTROMETER_ID 2 FOR 3D_13C_SEPARATED_NOESY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 19 -25.81 -38.48 REMARK 500 1 PRO A 22 80.00 -69.72 REMARK 500 1 GLN A 58 -35.72 -37.37 REMARK 500 1 VAL A 64 -70.24 -49.49 REMARK 500 1 SER A 66 -34.64 -37.79 REMARK 500 1 ASN A 67 107.29 -52.34 REMARK 500 1 PHE A 80 108.22 -56.45 REMARK 500 1 SER A 87 171.97 -54.81 REMARK 500 1 TYR A 93 -39.51 -35.61 REMARK 500 1 LEU A 141 171.23 -55.79 REMARK 500 2 ASP A 17 107.00 -52.26 REMARK 500 2 PRO A 22 5.97 -69.74 REMARK 500 2 ALA A 56 -39.51 -34.10 REMARK 500 2 ASN A 61 -17.05 -49.13 REMARK 500 2 VAL A 64 -71.63 -61.80 REMARK 500 2 GLU A 76 -68.25 -98.04 REMARK 500 2 PHE A 96 -70.78 -42.61 REMARK 500 2 LEU A 144 107.29 -52.79 REMARK 500 3 ALA A 56 -68.68 -97.93 REMARK 500 3 PHE A 80 102.76 -57.32 REMARK 500 3 SER A 87 173.31 -52.15 REMARK 500 3 LYS A 115 108.74 -55.57 REMARK 500 3 HIS A 138 -60.12 -91.61 REMARK 500 3 LEU A 141 171.32 -58.86 REMARK 500 3 PRO A 150 90.47 -69.71 REMARK 500 4 ASP A 17 -65.16 -95.47 REMARK 500 4 PRO A 22 0.56 -69.82 REMARK 500 4 ILE A 23 32.01 35.14 REMARK 500 4 TRP A 44 170.80 -58.28 REMARK 500 4 LEU A 122 177.68 -57.74 REMARK 500 4 PRO A 150 86.88 -69.79 REMARK 500 5 THR A 14 -60.24 -94.92 REMARK 500 5 LEU A 18 -70.06 -64.64 REMARK 500 5 PRO A 22 97.94 -69.77 REMARK 500 5 ALA A 34 -30.53 -35.61 REMARK 500 5 ASN A 67 109.55 -58.55 REMARK 500 5 PHE A 80 104.72 -58.69 REMARK 500 5 PRO A 150 -177.47 -69.78 REMARK 500 6 PRO A 22 97.39 -69.78 REMARK 500 6 ALA A 34 -31.79 -34.77 REMARK 500 6 ASN A 61 -19.98 -46.02 REMARK 500 6 VAL A 64 -71.84 -53.31 REMARK 500 6 PRO A 150 7.84 -69.82 REMARK 500 7 PRO A 22 2.65 -69.75 REMARK 500 7 ILE A 23 31.98 38.79 REMARK 500 7 MET A 26 106.30 -53.08 REMARK 500 8 PRO A 22 0.15 -69.75 REMARK 500 8 GLU A 89 -39.47 -39.22 REMARK 500 8 ARG A 111 -60.08 -93.73 REMARK 500 8 LEU A 116 -72.65 -97.96 REMARK 500 REMARK 500 THIS ENTRY HAS 127 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002000776.3 RELATED DB: TARGETDB DBREF 2DLX A 8 147 UNP O94888 UBXD7_HUMAN 131 270 SEQADV 2DLX GLY A 1 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 2 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 3 UNP O94888 CLONING ARTIFACT SEQADV 2DLX GLY A 4 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 5 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 6 UNP O94888 CLONING ARTIFACT SEQADV 2DLX GLY A 7 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 148 UNP O94888 CLONING ARTIFACT SEQADV 2DLX GLY A 149 UNP O94888 CLONING ARTIFACT SEQADV 2DLX PRO A 150 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 151 UNP O94888 CLONING ARTIFACT SEQADV 2DLX SER A 152 UNP O94888 CLONING ARTIFACT SEQADV 2DLX GLY A 153 UNP O94888 CLONING ARTIFACT SEQRES 1 A 153 GLY SER SER GLY SER SER GLY ILE ASP LYS LYS LEU THR SEQRES 2 A 153 THR LEU ALA ASP LEU PHE ARG PRO PRO ILE ASP LEU MET SEQRES 3 A 153 HIS LYS GLY SER PHE GLU THR ALA LYS GLU CYS GLY GLN SEQRES 4 A 153 MET GLN ASN LYS TRP LEU MET ILE ASN ILE GLN ASN VAL SEQRES 5 A 153 GLN ASP PHE ALA CYS GLN CYS LEU ASN ARG ASP VAL TRP SEQRES 6 A 153 SER ASN GLU ALA VAL LYS ASN ILE ILE ARG GLU HIS PHE SEQRES 7 A 153 ILE PHE TRP GLN VAL TYR HIS ASP SER GLU GLU GLY GLN SEQRES 8 A 153 ARG TYR ILE GLN PHE TYR LYS LEU GLY ASP PHE PRO TYR SEQRES 9 A 153 VAL SER ILE LEU ASP PRO ARG THR GLY GLN LYS LEU VAL SEQRES 10 A 153 GLU TRP HIS GLN LEU ASP VAL SER SER PHE LEU ASP GLN SEQRES 11 A 153 VAL THR GLY PHE LEU GLY GLU HIS GLY GLN LEU ASP GLY SEQRES 12 A 153 LEU SER SER SER SER GLY PRO SER SER GLY HELIX 1 1 PHE A 31 GLN A 41 1 11 HELIX 2 2 CYS A 57 ASP A 63 1 7 HELIX 3 3 GLU A 68 GLU A 76 1 9 HELIX 4 4 GLU A 88 TYR A 97 1 10 HELIX 5 5 VAL A 124 GLU A 137 1 14 SHEET 1 A 4 PHE A 78 TYR A 84 0 SHEET 2 A 4 TRP A 44 GLN A 50 1 N ASN A 48 O TRP A 81 SHEET 3 A 4 TYR A 104 LEU A 108 -1 O LEU A 108 N LEU A 45 SHEET 4 A 4 VAL A 117 TRP A 119 -1 O TRP A 119 N VAL A 105 CISPEP 1 PHE A 102 PRO A 103 1 0.06 CISPEP 2 PHE A 102 PRO A 103 2 -0.04 CISPEP 3 PHE A 102 PRO A 103 3 0.04 CISPEP 4 PHE A 102 PRO A 103 4 0.08 CISPEP 5 PHE A 102 PRO A 103 5 0.05 CISPEP 6 PHE A 102 PRO A 103 6 0.07 CISPEP 7 PHE A 102 PRO A 103 7 0.02 CISPEP 8 PHE A 102 PRO A 103 8 0.05 CISPEP 9 PHE A 102 PRO A 103 9 0.02 CISPEP 10 PHE A 102 PRO A 103 10 0.12 CISPEP 11 PHE A 102 PRO A 103 11 -0.05 CISPEP 12 PHE A 102 PRO A 103 12 0.02 CISPEP 13 PHE A 102 PRO A 103 13 0.00 CISPEP 14 PHE A 102 PRO A 103 14 0.04 CISPEP 15 PHE A 102 PRO A 103 15 -0.04 CISPEP 16 PHE A 102 PRO A 103 16 0.02 CISPEP 17 PHE A 102 PRO A 103 17 0.09 CISPEP 18 PHE A 102 PRO A 103 18 -0.02 CISPEP 19 PHE A 102 PRO A 103 19 0.05 CISPEP 20 PHE A 102 PRO A 103 20 -0.06 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1