HEADER CONTRACTILE PROTEIN 20-APR-06 2DM7 TITLE SOLUTION STRUCTURE OF THE 14TH IG-LIKE DOMAIN OF HUMAN KIAA1556 TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA1556 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG-LIKE DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA1556; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P051017-23; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS BETA-SANDWICH, IG-FOLD, OBSCURIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, CONTRACTILE KEYWDS 4 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.NAGASHIMA,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DM7 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DM7 1 VERSN REVDAT 1 20-OCT-06 2DM7 0 JRNL AUTH K.NAGASHIMA,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 14TH IG-LIKE DOMAIN OF HUMAN JRNL TITL 2 KIAA1556 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DELTA NMR 4.3.2, CYANA 2.0.17 REMARK 3 AUTHORS : JEOL (DELTA NMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DM7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025578. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.17MM 13C, 15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LEAST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -47.79 -132.13 REMARK 500 1 SER A 6 154.39 -46.62 REMARK 500 1 ASP A 14 124.87 -36.20 REMARK 500 1 ALA A 24 -175.24 -68.58 REMARK 500 1 VAL A 35 109.15 -59.68 REMARK 500 1 PRO A 44 3.29 -69.70 REMARK 500 1 LEU A 69 171.19 -49.42 REMARK 500 1 ALA A 74 103.00 -58.55 REMARK 500 1 THR A 100 137.89 -37.06 REMARK 500 2 LEU A 15 143.20 -35.45 REMARK 500 2 PRO A 44 4.06 -69.75 REMARK 500 2 PHE A 99 -66.90 -104.17 REMARK 500 3 SER A 2 -46.42 -130.33 REMARK 500 3 ASP A 14 136.23 -38.66 REMARK 500 3 VAL A 35 106.46 -59.72 REMARK 500 3 PRO A 44 4.42 -69.75 REMARK 500 3 LEU A 69 167.83 -49.84 REMARK 500 3 ALA A 74 100.82 -51.38 REMARK 500 3 GLN A 83 -42.02 -132.44 REMARK 500 3 LEU A 95 153.58 -46.62 REMARK 500 3 ALA A 97 170.13 -48.53 REMARK 500 4 ASP A 14 125.21 -38.85 REMARK 500 4 GLU A 22 132.40 -39.63 REMARK 500 4 ALA A 24 -174.90 -60.74 REMARK 500 4 PRO A 44 3.64 -69.76 REMARK 500 4 ASP A 68 49.05 73.11 REMARK 500 4 VAL A 71 -33.65 -39.40 REMARK 500 4 ALA A 74 100.66 -46.18 REMARK 500 4 PHE A 99 95.18 -51.52 REMARK 500 4 THR A 100 73.95 -64.54 REMARK 500 4 SER A 107 48.43 34.56 REMARK 500 5 ASP A 14 147.46 -38.64 REMARK 500 5 ALA A 24 -175.47 -65.76 REMARK 500 5 PRO A 44 3.82 -69.80 REMARK 500 5 ARG A 52 42.43 -80.96 REMARK 500 5 TYR A 53 116.04 -161.10 REMARK 500 5 LEU A 69 171.52 -47.38 REMARK 500 5 ALA A 74 106.81 -55.78 REMARK 500 5 THR A 100 94.46 -64.16 REMARK 500 6 ASP A 14 124.77 -35.72 REMARK 500 6 PRO A 44 3.55 -69.78 REMARK 500 6 ARG A 52 43.20 -81.05 REMARK 500 6 LEU A 69 171.46 -53.06 REMARK 500 6 LEU A 95 154.48 -37.21 REMARK 500 6 THR A 100 143.54 -39.17 REMARK 500 6 GLU A 101 105.47 -165.67 REMARK 500 7 PRO A 8 -173.33 -69.71 REMARK 500 7 ALA A 26 -175.77 -62.69 REMARK 500 7 THR A 27 109.70 -165.65 REMARK 500 7 PRO A 44 3.05 -69.81 REMARK 500 REMARK 500 THIS ENTRY HAS 147 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001528.2 RELATED DB: TARGETDB DBREF 2DM7 A 8 102 UNP Q8NHN3 Q8NHN3_HUMAN 1157 1251 SEQADV 2DM7 GLY A 1 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 2 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 3 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 GLY A 4 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 5 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 6 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 GLY A 7 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 103 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 GLY A 104 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 PRO A 105 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 106 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 SER A 107 UNP Q8NHN3 CLONING ARTIFACT SEQADV 2DM7 GLY A 108 UNP Q8NHN3 CLONING ARTIFACT SEQRES 1 A 108 GLY SER SER GLY SER SER GLY PRO ALA ARG PHE THR GLN SEQRES 2 A 108 ASP LEU LYS THR LYS GLU ALA SER GLU GLY ALA THR ALA SEQRES 3 A 108 THR LEU GLN CYS GLU LEU SER LYS VAL ALA PRO VAL GLU SEQRES 4 A 108 TRP LYS LYS GLY PRO GLU THR LEU ARG ASP GLY GLY ARG SEQRES 5 A 108 TYR SER LEU LYS GLN ASP GLY THR ARG CYS GLU LEU GLN SEQRES 6 A 108 ILE HIS ASP LEU SER VAL ALA ASP ALA GLY GLU TYR SER SEQRES 7 A 108 CYS MET CYS GLY GLN GLU ARG THR SER ALA THR LEU THR SEQRES 8 A 108 VAL ARG ALA LEU PRO ALA ARG PHE THR GLU GLY SER GLY SEQRES 9 A 108 PRO SER SER GLY SHEET 1 A 2 GLU A 19 SER A 21 0 SHEET 2 A 2 THR A 91 ARG A 93 1 O ARG A 93 N ALA A 20 SHEET 1 B 3 ALA A 26 GLU A 31 0 SHEET 2 B 3 ARG A 61 ILE A 66 -1 O CYS A 62 N CYS A 30 SHEET 3 B 3 SER A 54 ASP A 58 -1 N LYS A 56 O GLU A 63 SHEET 1 C 3 GLU A 39 LYS A 41 0 SHEET 2 C 3 GLU A 76 CYS A 81 -1 O SER A 78 N LYS A 41 SHEET 3 C 3 GLU A 84 THR A 89 -1 O THR A 86 N CYS A 79 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1