HEADER HYDROLASE 20-APR-06 2DM9 TITLE CRYSTAL STRUCTURE OF PH1978 FROM PYROCOCCUS HORIKOSHII OT3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: V-TYPE ATP SYNTHASE SUBUNIT E; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: A-ATPASE, V-TYPE ATPASE SUBUNIT E; COMPND 5 EC: 3.6.3.14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 70601; SOURCE 4 STRAIN: OT3; SOURCE 5 GENE: ATPE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS (DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS A-ATPASE, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.K.LOKANATH,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 5 13-MAR-24 2DM9 1 REMARK REVDAT 4 13-JUL-11 2DM9 1 VERSN REVDAT 3 24-FEB-09 2DM9 1 VERSN REVDAT 2 20-FEB-07 2DM9 1 REMARK REVDAT 1 16-JAN-07 2DM9 0 JRNL AUTH N.K.LOKANATH,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF PH1978 FROM PYROCOCCUS HORIKOSHII OT3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.K.LOKANATH,Y.MATSUURA,C.KUROISHI,N.TAKAHASHI,N.KUNISHIMA REMARK 1 TITL DIMERIC CORE STRUCTURE OF MODULAR STATOR SUBUNIT E OF REMARK 1 TITL 2 ARCHAEAL H(+)-ATPASE REMARK 1 REF J.MOL.BIOL. V. 366 933 2007 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 17189637 REMARK 1 DOI 10.1016/J.JMB.2006.11.088 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.27 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 18477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 993 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1305 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1874 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.09000 REMARK 3 B22 (A**2) : 1.66000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.184 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.765 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1883 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1818 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2513 ; 0.960 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4234 ; 1.068 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 234 ; 4.899 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 298 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2048 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 354 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 403 ; 0.187 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2123 ; 0.219 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1216 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 135 ; 0.125 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.114 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.299 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1164 ; 0.514 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1885 ; 1.011 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 719 ; 1.656 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 628 ; 3.019 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2DM9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025580. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-04; 29-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0; NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL26B1; BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.0, 0.97946, 0.97914 REMARK 200 MONOCHROMATOR : SI111 DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR; NULL REMARK 200 OPTICS : RH COATED BENT-CYLINDRICAL REMARK 200 MIRROR; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V; RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18477 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.27700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 28.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, CHES, PH 8.5, MICROBATCH, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.09800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.74050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.65850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.74050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.09800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.65850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 5 REMARK 465 LEU A 6 REMARK 465 ILE A 7 REMARK 465 ILE A 8 REMARK 465 GLN A 9 REMARK 465 GLU A 10 REMARK 465 ILE A 11 REMARK 465 ASN A 12 REMARK 465 LYS A 13 REMARK 465 GLU A 14 REMARK 465 ALA A 15 REMARK 465 GLU A 16 REMARK 465 ARG A 17 REMARK 465 LYS A 18 REMARK 465 ILE A 19 REMARK 465 GLU A 20 REMARK 465 TYR A 21 REMARK 465 ILE A 22 REMARK 465 LEU A 23 REMARK 465 ASN A 24 REMARK 465 GLU A 25 REMARK 465 ALA A 26 REMARK 465 ARG A 27 REMARK 465 GLN A 28 REMARK 465 GLN A 29 REMARK 465 ALA A 30 REMARK 465 GLU A 31 REMARK 465 LYS A 32 REMARK 465 ILE A 33 REMARK 465 LYS A 34 REMARK 465 GLU A 35 REMARK 465 GLU A 36 REMARK 465 ALA A 37 REMARK 465 ARG A 38 REMARK 465 ARG A 39 REMARK 465 ASN A 40 REMARK 465 ALA A 41 REMARK 465 GLU A 42 REMARK 465 ALA A 43 REMARK 465 LYS A 44 REMARK 465 ALA A 45 REMARK 465 GLU A 46 REMARK 465 TRP A 47 REMARK 465 ILE A 48 REMARK 465 ILE A 49 REMARK 465 ARG A 50 REMARK 465 ARG A 51 REMARK 465 ALA A 52 REMARK 465 LYS A 53 REMARK 465 THR A 54 REMARK 465 GLN A 55 REMARK 465 ALA A 56 REMARK 465 GLU A 57 REMARK 465 LEU A 58 REMARK 465 GLU A 59 REMARK 465 LYS A 60 REMARK 465 GLN A 61 REMARK 465 ARG A 62 REMARK 465 ILE A 63 REMARK 465 ILE A 64 REMARK 465 ALA A 65 REMARK 465 ASN A 66 REMARK 465 ALA A 67 REMARK 465 ARG A 68 REMARK 465 LEU A 69 REMARK 465 GLU A 70 REMARK 465 VAL A 71 REMARK 465 ARG A 72 REMARK 465 ARG A 73 REMARK 465 LYS A 74 REMARK 465 ARG A 75 REMARK 465 LEU A 76 REMARK 465 ALA A 77 REMARK 465 ILE A 78 REMARK 465 GLN A 79 REMARK 465 GLU A 80 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 LEU B 6 REMARK 465 ILE B 7 REMARK 465 ILE B 8 REMARK 465 GLN B 9 REMARK 465 GLU B 10 REMARK 465 ILE B 11 REMARK 465 ASN B 12 REMARK 465 LYS B 13 REMARK 465 GLU B 14 REMARK 465 ALA B 15 REMARK 465 GLU B 16 REMARK 465 ARG B 17 REMARK 465 LYS B 18 REMARK 465 ILE B 19 REMARK 465 GLU B 20 REMARK 465 TYR B 21 REMARK 465 ILE B 22 REMARK 465 LEU B 23 REMARK 465 ASN B 24 REMARK 465 GLU B 25 REMARK 465 ALA B 26 REMARK 465 ARG B 27 REMARK 465 GLN B 28 REMARK 465 GLN B 29 REMARK 465 ALA B 30 REMARK 465 GLU B 31 REMARK 465 LYS B 32 REMARK 465 ILE B 33 REMARK 465 LYS B 34 REMARK 465 GLU B 35 REMARK 465 GLU B 36 REMARK 465 ALA B 37 REMARK 465 ARG B 38 REMARK 465 ARG B 39 REMARK 465 ASN B 40 REMARK 465 ALA B 41 REMARK 465 GLU B 42 REMARK 465 ALA B 43 REMARK 465 LYS B 44 REMARK 465 ALA B 45 REMARK 465 GLU B 46 REMARK 465 TRP B 47 REMARK 465 ILE B 48 REMARK 465 ILE B 49 REMARK 465 ARG B 50 REMARK 465 ARG B 51 REMARK 465 ALA B 52 REMARK 465 LYS B 53 REMARK 465 THR B 54 REMARK 465 GLN B 55 REMARK 465 ALA B 56 REMARK 465 GLU B 57 REMARK 465 LEU B 58 REMARK 465 GLU B 59 REMARK 465 LYS B 60 REMARK 465 GLN B 61 REMARK 465 ARG B 62 REMARK 465 ILE B 63 REMARK 465 ILE B 64 REMARK 465 ALA B 65 REMARK 465 ASN B 66 REMARK 465 ALA B 67 REMARK 465 ARG B 68 REMARK 465 LEU B 69 REMARK 465 GLU B 70 REMARK 465 VAL B 71 REMARK 465 ARG B 72 REMARK 465 ARG B 73 REMARK 465 LYS B 74 REMARK 465 ARG B 75 REMARK 465 LEU B 76 REMARK 465 ALA B 77 REMARK 465 ILE B 78 REMARK 465 GLN B 79 REMARK 465 GLU B 80 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 145 82.41 -163.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PHO001001978.1 RELATED DB: TARGETDB REMARK 900 RELATED ID: 2DMA RELATED DB: PDB REMARK 900 THE SAME PROTEIN(FORM II) DBREF 2DM9 A 1 198 UNP O57724 VATE_PYRHO 1 198 DBREF 2DM9 B 1 198 UNP O57724 VATE_PYRHO 1 198 SEQRES 1 A 198 MET ASN GLY ALA GLU LEU ILE ILE GLN GLU ILE ASN LYS SEQRES 2 A 198 GLU ALA GLU ARG LYS ILE GLU TYR ILE LEU ASN GLU ALA SEQRES 3 A 198 ARG GLN GLN ALA GLU LYS ILE LYS GLU GLU ALA ARG ARG SEQRES 4 A 198 ASN ALA GLU ALA LYS ALA GLU TRP ILE ILE ARG ARG ALA SEQRES 5 A 198 LYS THR GLN ALA GLU LEU GLU LYS GLN ARG ILE ILE ALA SEQRES 6 A 198 ASN ALA ARG LEU GLU VAL ARG ARG LYS ARG LEU ALA ILE SEQRES 7 A 198 GLN GLU GLU ILE ILE SER SER VAL LEU GLU GLU VAL LYS SEQRES 8 A 198 ARG ARG LEU GLU THR MET SER GLU ASP GLU TYR PHE GLU SEQRES 9 A 198 SER VAL LYS ALA LEU LEU LYS GLU ALA ILE LYS GLU LEU SEQRES 10 A 198 ASN GLU LYS LYS VAL ARG VAL MET SER ASN GLU LYS THR SEQRES 11 A 198 LEU GLY LEU ILE ALA SER ARG ILE GLU GLU ILE LYS SER SEQRES 12 A 198 GLU LEU GLY ASP VAL SER ILE GLU LEU GLY GLU THR VAL SEQRES 13 A 198 ASP THR MET GLY GLY VAL ILE VAL GLU THR GLU ASP GLY SEQRES 14 A 198 ARG ILE ARG ILE ASP ASN THR PHE GLU ALA ARG MET GLU SEQRES 15 A 198 ARG PHE GLU GLY GLU ILE ARG SER THR ILE ALA LYS VAL SEQRES 16 A 198 LEU PHE GLY SEQRES 1 B 198 MET ASN GLY ALA GLU LEU ILE ILE GLN GLU ILE ASN LYS SEQRES 2 B 198 GLU ALA GLU ARG LYS ILE GLU TYR ILE LEU ASN GLU ALA SEQRES 3 B 198 ARG GLN GLN ALA GLU LYS ILE LYS GLU GLU ALA ARG ARG SEQRES 4 B 198 ASN ALA GLU ALA LYS ALA GLU TRP ILE ILE ARG ARG ALA SEQRES 5 B 198 LYS THR GLN ALA GLU LEU GLU LYS GLN ARG ILE ILE ALA SEQRES 6 B 198 ASN ALA ARG LEU GLU VAL ARG ARG LYS ARG LEU ALA ILE SEQRES 7 B 198 GLN GLU GLU ILE ILE SER SER VAL LEU GLU GLU VAL LYS SEQRES 8 B 198 ARG ARG LEU GLU THR MET SER GLU ASP GLU TYR PHE GLU SEQRES 9 B 198 SER VAL LYS ALA LEU LEU LYS GLU ALA ILE LYS GLU LEU SEQRES 10 B 198 ASN GLU LYS LYS VAL ARG VAL MET SER ASN GLU LYS THR SEQRES 11 B 198 LEU GLY LEU ILE ALA SER ARG ILE GLU GLU ILE LYS SER SEQRES 12 B 198 GLU LEU GLY ASP VAL SER ILE GLU LEU GLY GLU THR VAL SEQRES 13 B 198 ASP THR MET GLY GLY VAL ILE VAL GLU THR GLU ASP GLY SEQRES 14 B 198 ARG ILE ARG ILE ASP ASN THR PHE GLU ALA ARG MET GLU SEQRES 15 B 198 ARG PHE GLU GLY GLU ILE ARG SER THR ILE ALA LYS VAL SEQRES 16 B 198 LEU PHE GLY FORMUL 3 HOH *166(H2 O) HELIX 1 1 GLU A 81 MET A 97 1 17 HELIX 2 2 SER A 98 ASN A 118 1 21 HELIX 3 3 ASN A 127 ARG A 137 1 11 HELIX 4 4 ARG A 137 LEU A 145 1 9 HELIX 5 5 PHE A 177 PHE A 184 1 8 HELIX 6 6 PHE A 184 GLY A 198 1 15 HELIX 7 7 GLU B 81 MET B 97 1 17 HELIX 8 8 SER B 98 ASN B 118 1 21 HELIX 9 9 ASN B 127 ARG B 137 1 11 HELIX 10 10 ARG B 137 GLY B 146 1 10 HELIX 11 11 PHE B 177 PHE B 184 1 8 HELIX 12 12 PHE B 184 GLY B 198 1 15 SHEET 1 A 4 SER A 149 LEU A 152 0 SHEET 2 A 4 LYS A 121 MET A 125 1 N VAL A 124 O GLU A 151 SHEET 3 A 4 GLY A 161 THR A 166 -1 O GLU A 165 N ARG A 123 SHEET 4 A 4 ARG A 172 THR A 176 -1 O ILE A 173 N VAL A 164 SHEET 1 B 4 SER B 149 LEU B 152 0 SHEET 2 B 4 LYS B 121 MET B 125 1 N VAL B 122 O SER B 149 SHEET 3 B 4 GLY B 161 THR B 166 -1 O GLU B 165 N ARG B 123 SHEET 4 B 4 ARG B 172 THR B 176 -1 O ILE B 173 N VAL B 164 CRYST1 52.196 55.317 77.481 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019159 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018078 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012906 0.00000