data_2DO0 # _entry.id 2DO0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DO0 pdb_00002do0 10.2210/pdb2do0/pdb RCSB RCSB025638 ? ? WWPDB D_1000025638 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003002075.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DO0 _pdbx_database_status.recvd_initial_deposition_date 2006-04-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Suzuki, S.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the RNA binding domain of heterogeneous nuclear ribonucleoprotein M' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, S.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Heterogeneous nuclear ribonucleoprotein M' _entity.formula_weight 12261.902 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'hnRNP M' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQL LFDRPMHVKMDERALPKGDFFPPERPQQSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQL LFDRPMHVKMDERALPKGDFFPPERPQQSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003002075.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 LEU n 1 10 GLN n 1 11 ALA n 1 12 GLY n 1 13 ARG n 1 14 LEU n 1 15 GLY n 1 16 SER n 1 17 THR n 1 18 VAL n 1 19 PHE n 1 20 VAL n 1 21 ALA n 1 22 ASN n 1 23 LEU n 1 24 ASP n 1 25 TYR n 1 26 LYS n 1 27 VAL n 1 28 GLY n 1 29 TRP n 1 30 LYS n 1 31 LYS n 1 32 LEU n 1 33 LYS n 1 34 GLU n 1 35 VAL n 1 36 PHE n 1 37 SER n 1 38 MET n 1 39 ALA n 1 40 GLY n 1 41 VAL n 1 42 VAL n 1 43 VAL n 1 44 ARG n 1 45 ALA n 1 46 ASP n 1 47 ILE n 1 48 LEU n 1 49 GLU n 1 50 ASP n 1 51 LYS n 1 52 ASP n 1 53 GLY n 1 54 LYS n 1 55 SER n 1 56 ARG n 1 57 GLY n 1 58 ILE n 1 59 GLY n 1 60 THR n 1 61 VAL n 1 62 THR n 1 63 PHE n 1 64 GLU n 1 65 GLN n 1 66 SER n 1 67 ILE n 1 68 GLU n 1 69 ALA n 1 70 VAL n 1 71 GLN n 1 72 ALA n 1 73 ILE n 1 74 SER n 1 75 MET n 1 76 PHE n 1 77 ASN n 1 78 GLY n 1 79 GLN n 1 80 LEU n 1 81 LEU n 1 82 PHE n 1 83 ASP n 1 84 ARG n 1 85 PRO n 1 86 MET n 1 87 HIS n 1 88 VAL n 1 89 LYS n 1 90 MET n 1 91 ASP n 1 92 GLU n 1 93 ARG n 1 94 ALA n 1 95 LEU n 1 96 PRO n 1 97 LYS n 1 98 GLY n 1 99 ASP n 1 100 PHE n 1 101 PHE n 1 102 PRO n 1 103 PRO n 1 104 GLU n 1 105 ARG n 1 106 PRO n 1 107 GLN n 1 108 GLN n 1 109 SER n 1 110 GLY n 1 111 PRO n 1 112 SER n 1 113 SER n 1 114 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene HNRPM _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050719-20 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HNRPM_HUMAN _struct_ref.pdbx_db_accession P52272 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 195 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DO0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 108 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P52272 _struct_ref_seq.db_align_beg 195 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 295 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 195 _struct_ref_seq.pdbx_auth_seq_align_end 295 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DO0 GLY A 1 ? UNP P52272 ? ? 'cloning artifact' 188 1 1 2DO0 SER A 2 ? UNP P52272 ? ? 'cloning artifact' 189 2 1 2DO0 SER A 3 ? UNP P52272 ? ? 'cloning artifact' 190 3 1 2DO0 GLY A 4 ? UNP P52272 ? ? 'cloning artifact' 191 4 1 2DO0 SER A 5 ? UNP P52272 ? ? 'cloning artifact' 192 5 1 2DO0 SER A 6 ? UNP P52272 ? ? 'cloning artifact' 193 6 1 2DO0 GLY A 7 ? UNP P52272 ? ? 'cloning artifact' 194 7 1 2DO0 SER A 109 ? UNP P52272 ? ? 'cloning artifact' 296 8 1 2DO0 GLY A 110 ? UNP P52272 ? ? 'cloning artifact' 297 9 1 2DO0 PRO A 111 ? UNP P52272 ? ? 'cloning artifact' 298 10 1 2DO0 SER A 112 ? UNP P52272 ? ? 'cloning artifact' 299 11 1 2DO0 SER A 113 ? UNP P52272 ? ? 'cloning artifact' 300 12 1 2DO0 GLY A 114 ? UNP P52272 ? ? 'cloning artifact' 301 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.1mM 13C/15N-PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DO0 _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2DO0 _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 2DO0 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DO0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9321 'Kobayashi, N.' 4 'data analysis' Olivia 1.10.5 'Yokochi, M.' 5 'structure solution' CYANA 2.0.17 'Guntert, P.' 6 refinement CYANA 2.0.17 'Guntert, P.' 7 # _exptl.entry_id 2DO0 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DO0 _struct.title 'Solution structure of the RNA binding domain of heterogeneous nuclear ribonucleoprotein M' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DO0 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA recognition motif, RRM, RNA binding domain, RBD, RNP, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 29 ? PHE A 36 ? TRP A 216 PHE A 223 1 ? 8 HELX_P HELX_P2 2 SER A 66 ? PHE A 76 ? SER A 253 PHE A 263 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 42 ? LEU A 48 ? VAL A 229 LEU A 235 A 2 ILE A 58 ? PHE A 63 ? ILE A 245 PHE A 250 A 3 THR A 17 ? ALA A 21 ? THR A 204 ALA A 208 A 4 HIS A 87 ? MET A 90 ? HIS A 274 MET A 277 B 1 LEU A 80 ? LEU A 81 ? LEU A 267 LEU A 268 B 2 ARG A 84 ? PRO A 85 ? ARG A 271 PRO A 272 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 46 ? N ASP A 233 O THR A 60 ? O THR A 247 A 2 3 O VAL A 61 ? O VAL A 248 N VAL A 18 ? N VAL A 205 A 3 4 N PHE A 19 ? N PHE A 206 O LYS A 89 ? O LYS A 276 B 1 2 N LEU A 81 ? N LEU A 268 O ARG A 84 ? O ARG A 271 # _database_PDB_matrix.entry_id 2DO0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DO0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 188 188 GLY GLY A . n A 1 2 SER 2 189 189 SER SER A . n A 1 3 SER 3 190 190 SER SER A . n A 1 4 GLY 4 191 191 GLY GLY A . n A 1 5 SER 5 192 192 SER SER A . n A 1 6 SER 6 193 193 SER SER A . n A 1 7 GLY 7 194 194 GLY GLY A . n A 1 8 ALA 8 195 195 ALA ALA A . n A 1 9 LEU 9 196 196 LEU LEU A . n A 1 10 GLN 10 197 197 GLN GLN A . n A 1 11 ALA 11 198 198 ALA ALA A . n A 1 12 GLY 12 199 199 GLY GLY A . n A 1 13 ARG 13 200 200 ARG ARG A . n A 1 14 LEU 14 201 201 LEU LEU A . n A 1 15 GLY 15 202 202 GLY GLY A . n A 1 16 SER 16 203 203 SER SER A . n A 1 17 THR 17 204 204 THR THR A . n A 1 18 VAL 18 205 205 VAL VAL A . n A 1 19 PHE 19 206 206 PHE PHE A . n A 1 20 VAL 20 207 207 VAL VAL A . n A 1 21 ALA 21 208 208 ALA ALA A . n A 1 22 ASN 22 209 209 ASN ASN A . n A 1 23 LEU 23 210 210 LEU LEU A . n A 1 24 ASP 24 211 211 ASP ASP A . n A 1 25 TYR 25 212 212 TYR TYR A . n A 1 26 LYS 26 213 213 LYS LYS A . n A 1 27 VAL 27 214 214 VAL VAL A . n A 1 28 GLY 28 215 215 GLY GLY A . n A 1 29 TRP 29 216 216 TRP TRP A . n A 1 30 LYS 30 217 217 LYS LYS A . n A 1 31 LYS 31 218 218 LYS LYS A . n A 1 32 LEU 32 219 219 LEU LEU A . n A 1 33 LYS 33 220 220 LYS LYS A . n A 1 34 GLU 34 221 221 GLU GLU A . n A 1 35 VAL 35 222 222 VAL VAL A . n A 1 36 PHE 36 223 223 PHE PHE A . n A 1 37 SER 37 224 224 SER SER A . n A 1 38 MET 38 225 225 MET MET A . n A 1 39 ALA 39 226 226 ALA ALA A . n A 1 40 GLY 40 227 227 GLY GLY A . n A 1 41 VAL 41 228 228 VAL VAL A . n A 1 42 VAL 42 229 229 VAL VAL A . n A 1 43 VAL 43 230 230 VAL VAL A . n A 1 44 ARG 44 231 231 ARG ARG A . n A 1 45 ALA 45 232 232 ALA ALA A . n A 1 46 ASP 46 233 233 ASP ASP A . n A 1 47 ILE 47 234 234 ILE ILE A . n A 1 48 LEU 48 235 235 LEU LEU A . n A 1 49 GLU 49 236 236 GLU GLU A . n A 1 50 ASP 50 237 237 ASP ASP A . n A 1 51 LYS 51 238 238 LYS LYS A . n A 1 52 ASP 52 239 239 ASP ASP A . n A 1 53 GLY 53 240 240 GLY GLY A . n A 1 54 LYS 54 241 241 LYS LYS A . n A 1 55 SER 55 242 242 SER SER A . n A 1 56 ARG 56 243 243 ARG ARG A . n A 1 57 GLY 57 244 244 GLY GLY A . n A 1 58 ILE 58 245 245 ILE ILE A . n A 1 59 GLY 59 246 246 GLY GLY A . n A 1 60 THR 60 247 247 THR THR A . n A 1 61 VAL 61 248 248 VAL VAL A . n A 1 62 THR 62 249 249 THR THR A . n A 1 63 PHE 63 250 250 PHE PHE A . n A 1 64 GLU 64 251 251 GLU GLU A . n A 1 65 GLN 65 252 252 GLN GLN A . n A 1 66 SER 66 253 253 SER SER A . n A 1 67 ILE 67 254 254 ILE ILE A . n A 1 68 GLU 68 255 255 GLU GLU A . n A 1 69 ALA 69 256 256 ALA ALA A . n A 1 70 VAL 70 257 257 VAL VAL A . n A 1 71 GLN 71 258 258 GLN GLN A . n A 1 72 ALA 72 259 259 ALA ALA A . n A 1 73 ILE 73 260 260 ILE ILE A . n A 1 74 SER 74 261 261 SER SER A . n A 1 75 MET 75 262 262 MET MET A . n A 1 76 PHE 76 263 263 PHE PHE A . n A 1 77 ASN 77 264 264 ASN ASN A . n A 1 78 GLY 78 265 265 GLY GLY A . n A 1 79 GLN 79 266 266 GLN GLN A . n A 1 80 LEU 80 267 267 LEU LEU A . n A 1 81 LEU 81 268 268 LEU LEU A . n A 1 82 PHE 82 269 269 PHE PHE A . n A 1 83 ASP 83 270 270 ASP ASP A . n A 1 84 ARG 84 271 271 ARG ARG A . n A 1 85 PRO 85 272 272 PRO PRO A . n A 1 86 MET 86 273 273 MET MET A . n A 1 87 HIS 87 274 274 HIS HIS A . n A 1 88 VAL 88 275 275 VAL VAL A . n A 1 89 LYS 89 276 276 LYS LYS A . n A 1 90 MET 90 277 277 MET MET A . n A 1 91 ASP 91 278 278 ASP ASP A . n A 1 92 GLU 92 279 279 GLU GLU A . n A 1 93 ARG 93 280 280 ARG ARG A . n A 1 94 ALA 94 281 281 ALA ALA A . n A 1 95 LEU 95 282 282 LEU LEU A . n A 1 96 PRO 96 283 283 PRO PRO A . n A 1 97 LYS 97 284 284 LYS LYS A . n A 1 98 GLY 98 285 285 GLY GLY A . n A 1 99 ASP 99 286 286 ASP ASP A . n A 1 100 PHE 100 287 287 PHE PHE A . n A 1 101 PHE 101 288 288 PHE PHE A . n A 1 102 PRO 102 289 289 PRO PRO A . n A 1 103 PRO 103 290 290 PRO PRO A . n A 1 104 GLU 104 291 291 GLU GLU A . n A 1 105 ARG 105 292 292 ARG ARG A . n A 1 106 PRO 106 293 293 PRO PRO A . n A 1 107 GLN 107 294 294 GLN GLN A . n A 1 108 GLN 108 295 295 GLN GLN A . n A 1 109 SER 109 296 296 SER SER A . n A 1 110 GLY 110 297 297 GLY GLY A . n A 1 111 PRO 111 298 298 PRO PRO A . n A 1 112 SER 112 299 299 SER SER A . n A 1 113 SER 113 300 300 SER SER A . n A 1 114 GLY 114 301 301 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-27 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX Determination method: Author determined ; 700 ;SHEET Determination method: Author determined ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 280 ? ? -65.15 99.26 2 1 PHE A 287 ? ? -174.18 131.47 3 1 PRO A 290 ? ? -69.76 96.07 4 1 PRO A 293 ? ? -69.74 93.08 5 1 PRO A 298 ? ? -69.75 85.96 6 1 SER A 300 ? ? -161.53 112.92 7 2 LEU A 201 ? ? -47.53 96.86 8 2 SER A 203 ? ? -101.22 46.86 9 2 ARG A 243 ? ? -97.10 36.35 10 3 SER A 192 ? ? 34.73 43.59 11 3 PRO A 298 ? ? -69.80 2.60 12 4 ALA A 198 ? ? -55.09 178.23 13 4 SER A 203 ? ? -116.64 52.07 14 4 PHE A 287 ? ? -97.66 39.81 15 5 SER A 193 ? ? -123.38 -55.66 16 5 THR A 204 ? ? -34.61 114.61 17 5 LYS A 213 ? ? -85.53 40.17 18 5 ARG A 231 ? ? -160.58 119.80 19 5 LYS A 238 ? ? -35.78 -30.90 20 5 ARG A 243 ? ? -93.17 35.88 21 5 PRO A 293 ? ? -69.70 -176.14 22 6 SER A 189 ? ? -171.65 139.46 23 6 ALA A 195 ? ? -60.65 -72.73 24 6 ARG A 231 ? ? -161.35 117.83 25 6 ASP A 270 ? ? 72.13 31.45 26 6 PRO A 283 ? ? -69.76 -178.24 27 6 ASP A 286 ? ? -59.59 101.74 28 6 SER A 296 ? ? -174.65 141.65 29 6 SER A 300 ? ? -167.46 116.27 30 7 SER A 189 ? ? 39.48 42.31 31 7 ALA A 195 ? ? -52.82 -179.56 32 7 ASP A 278 ? ? -43.05 151.85 33 7 LEU A 282 ? ? -38.90 139.65 34 7 PRO A 298 ? ? -69.82 -176.58 35 8 LEU A 196 ? ? -90.96 -60.32 36 8 ALA A 198 ? ? -129.56 -51.84 37 8 ARG A 231 ? ? -163.81 117.87 38 9 SER A 189 ? ? -170.35 139.63 39 9 ALA A 195 ? ? -163.93 117.70 40 9 LEU A 201 ? ? -105.14 41.07 41 9 SER A 203 ? ? -95.07 44.21 42 9 ARG A 243 ? ? -95.92 35.38 43 9 PRO A 283 ? ? -69.80 96.31 44 9 PHE A 287 ? ? -164.33 118.71 45 9 PRO A 290 ? ? -69.75 5.36 46 9 PRO A 298 ? ? -69.77 96.53 47 9 SER A 300 ? ? -171.92 131.48 48 10 THR A 204 ? ? -34.87 129.66 49 10 ARG A 231 ? ? -168.56 118.58 50 10 LYS A 238 ? ? -39.70 -28.90 51 10 PRO A 293 ? ? -69.74 96.27 52 10 SER A 299 ? ? -172.22 128.87 53 10 SER A 300 ? ? -171.44 137.74 54 11 SER A 192 ? ? 38.73 42.23 55 11 THR A 204 ? ? -34.58 137.41 56 11 ARG A 243 ? ? -91.24 34.76 57 11 ALA A 281 ? ? -106.43 79.77 58 11 PRO A 283 ? ? -69.71 88.69 59 11 PHE A 287 ? ? -170.64 121.17 60 11 PRO A 290 ? ? -69.77 5.38 61 12 SER A 190 ? ? -57.70 89.83 62 12 SER A 203 ? ? -86.02 37.97 63 12 GLU A 279 ? ? -68.52 82.04 64 12 PHE A 287 ? ? -174.83 136.86 65 12 PRO A 290 ? ? -69.74 5.36 66 13 LEU A 196 ? ? -37.56 -29.69 67 13 ARG A 200 ? ? -91.06 43.45 68 13 ASN A 209 ? ? 71.46 32.60 69 13 LYS A 213 ? ? -85.74 33.28 70 13 VAL A 229 ? ? -50.48 96.68 71 13 GLU A 279 ? ? -110.76 79.04 72 13 PRO A 298 ? ? -69.77 -177.11 73 14 SER A 190 ? ? -160.96 118.15 74 14 SER A 192 ? ? -174.05 112.70 75 14 THR A 204 ? ? -35.19 121.70 76 14 ILE A 260 ? ? -39.90 -38.70 77 14 MET A 262 ? ? -48.46 -19.59 78 14 GLU A 279 ? ? -100.14 79.64 79 14 PRO A 298 ? ? -69.78 1.85 80 15 SER A 203 ? ? -109.01 53.07 81 15 TRP A 216 ? ? -38.89 -32.20 82 15 ASP A 278 ? ? -93.76 43.53 83 15 ARG A 280 ? ? -35.42 138.47 84 15 PRO A 290 ? ? -69.77 -177.89 85 16 LYS A 213 ? ? -82.99 37.72 86 16 ARG A 280 ? ? -50.98 107.06 87 16 PRO A 298 ? ? -69.79 -176.41 88 17 ARG A 200 ? ? -53.38 109.36 89 17 THR A 204 ? ? -35.82 139.70 90 17 TRP A 216 ? ? -36.35 -33.74 91 17 SER A 296 ? ? -173.84 140.34 92 18 SER A 203 ? ? -132.76 -33.60 93 18 ASN A 209 ? ? 74.85 45.98 94 18 TRP A 216 ? ? -36.61 -33.59 95 18 VAL A 229 ? ? -62.45 99.19 96 18 GLU A 279 ? ? -64.11 88.64 97 18 ARG A 292 ? ? -38.21 139.73 98 18 PRO A 293 ? ? -69.82 -164.94 99 18 PRO A 298 ? ? -69.80 -174.92 100 19 LEU A 196 ? ? -125.58 -53.16 101 19 ARG A 200 ? ? -63.70 80.04 102 19 THR A 204 ? ? -36.56 128.97 103 19 TRP A 216 ? ? -36.26 -31.82 104 19 PRO A 283 ? ? -69.76 -173.22 105 19 GLU A 291 ? ? -57.49 107.37 106 20 SER A 192 ? ? -174.02 108.23 107 20 LEU A 196 ? ? -114.49 57.87 108 20 THR A 204 ? ? -34.25 126.93 109 20 ASN A 264 ? ? -55.20 109.94 110 20 PRO A 298 ? ? -69.79 -177.89 #