HEADER TRANSFERASE 19-DEC-06 2E54 TITLE CRYSTAL STRUCTURE OF ACETYLORNITHINE AMINOTRANSFERASE FROM THERMOTOGA TITLE 2 MARITIMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLORNITHINE AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACOAT; COMPND 5 EC: 2.6.1.11; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS ARGD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.MIZUTANI,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 4 25-OCT-23 2E54 1 REMARK LINK REVDAT 3 13-JUL-11 2E54 1 VERSN REVDAT 2 24-FEB-09 2E54 1 VERSN REVDAT 1 19-JUN-07 2E54 0 JRNL AUTH H.MIZUTANI,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF ACETYLORNITHINE AMINOTRANSFERASE FROM JRNL TITL 2 THERMOTOGA MARITIMA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1368180.570 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 66127 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3333 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10275 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 563 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3019 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 516 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.70000 REMARK 3 B22 (A**2) : -4.39000 REMARK 3 B33 (A**2) : 1.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.820 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.960 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.420 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.840 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.770 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 65.49 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : PLP.PARAM REMARK 3 PARAMETER FILE 5 : EGL.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : PLP.TOP REMARK 3 TOPOLOGY FILE 5 : EGL.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2E54 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000026236. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : BENDING MAGNET REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66199 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.36400 REMARK 200 R SYM FOR SHELL (I) : 0.34000 REMARK 200 FOR SHELL : 5.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1VEF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M TRIS-HCL, 25%(W/V) PEG REMARK 280 3350, PH 8.5, MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.61100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.84850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.61100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.84850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED BY THE REMARK 300 OPERATIONS: -X+1, -Y, Z+1. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 67.22200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1136 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1489 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 68 NE1 TRP A 68 CE2 0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 37 62.96 66.67 REMARK 500 LYS A 59 -63.63 -108.38 REMARK 500 SER A 64 163.96 82.63 REMARK 500 THR A 83 -141.29 -128.13 REMARK 500 ALA A 91 -165.04 -112.13 REMARK 500 LEU A 149 -162.95 -100.81 REMARK 500 ILE A 186 89.84 56.14 REMARK 500 ALA A 239 -140.24 -168.50 REMARK 500 LYS A 240 -101.75 40.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1004 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 310 O REMARK 620 2 TYR A 313 O 93.2 REMARK 620 3 VAL A 316 O 106.6 91.6 REMARK 620 4 HOH A1071 O 92.3 168.4 96.7 REMARK 620 5 HOH A1073 O 86.5 84.3 166.5 85.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1005 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1043 O REMARK 620 2 HOH A1071 O 73.3 REMARK 620 3 HOH A1203 O 93.2 166.2 REMARK 620 4 HOH A1392 O 89.7 93.4 83.3 REMARK 620 5 HOH A1474 O 162.1 88.9 104.7 93.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TMA001001785.1 RELATED DB: TARGETDB DBREF 2E54 A 1 385 UNP Q9X2A5 ARGD_THEMA 1 385 SEQRES 1 A 385 MET TYR LEU MET ASN THR TYR SER ARG PHE PRO ALA THR SEQRES 2 A 385 PHE VAL TYR GLY LYS GLY SER TRP ILE TYR ASP GLU LYS SEQRES 3 A 385 GLY ASN ALA TYR LEU ASP PHE THR SER GLY ILE ALA VAL SEQRES 4 A 385 ASN VAL LEU GLY HIS SER HIS PRO ARG LEU VAL GLU ALA SEQRES 5 A 385 ILE LYS ASP GLN ALA GLU LYS LEU ILE HIS CYS SER ASN SEQRES 6 A 385 LEU PHE TRP ASN ARG PRO GLN MET GLU LEU ALA GLU LEU SEQRES 7 A 385 LEU SER LYS ASN THR PHE GLY GLY LYS VAL PHE PHE ALA SEQRES 8 A 385 ASN THR GLY THR GLU ALA ASN GLU ALA ALA ILE LYS ILE SEQRES 9 A 385 ALA ARG LYS TYR GLY LYS LYS LYS SER GLU LYS LYS TYR SEQRES 10 A 385 ARG ILE LEU SER ALA HIS ASN SER PHE HIS GLY ARG THR SEQRES 11 A 385 LEU GLY SER LEU THR ALA THR GLY GLN PRO LYS TYR GLN SEQRES 12 A 385 LYS PRO PHE GLU PRO LEU VAL PRO GLY PHE GLU TYR PHE SEQRES 13 A 385 GLU PHE ASN ASN VAL GLU ASP LEU ARG ARG LYS MET SER SEQRES 14 A 385 GLU ASP VAL CYS ALA VAL PHE LEU GLU PRO ILE GLN GLY SEQRES 15 A 385 GLU SER GLY ILE VAL PRO ALA THR LYS GLU PHE LEU GLU SEQRES 16 A 385 GLU ALA ARG LYS LEU CYS ASP GLU TYR ASP ALA LEU LEU SEQRES 17 A 385 VAL PHE ASP GLU VAL GLN CYS GLY MET GLY ARG THR GLY SEQRES 18 A 385 LYS LEU PHE ALA TYR GLN LYS TYR GLY VAL VAL PRO ASP SEQRES 19 A 385 VAL LEU THR THR ALA LYS GLY LEU GLY GLY GLY VAL PRO SEQRES 20 A 385 ILE GLY ALA VAL ILE VAL ASN GLU ARG ALA ASN VAL LEU SEQRES 21 A 385 GLU PRO GLY ASP HIS GLY THR THR PHE GLY GLY ASN PRO SEQRES 22 A 385 LEU ALA CYS ARG ALA GLY VAL THR VAL ILE LYS GLU LEU SEQRES 23 A 385 THR LYS GLU GLY PHE LEU GLU GLU VAL GLU GLU LYS GLY SEQRES 24 A 385 ASN TYR LEU MET LYS LYS LEU GLN GLU MET LYS GLU GLU SEQRES 25 A 385 TYR ASP VAL VAL ALA ASP VAL ARG GLY MET GLY LEU MET SEQRES 26 A 385 ILE GLY ILE GLN PHE ARG GLU GLU VAL SER ASN ARG GLU SEQRES 27 A 385 VAL ALA THR LYS CYS PHE GLU ASN LYS LEU LEU VAL VAL SEQRES 28 A 385 PRO ALA GLY ASN ASN THR ILE ARG PHE LEU PRO PRO LEU SEQRES 29 A 385 THR VAL GLU TYR GLY GLU ILE ASP LEU ALA VAL GLU THR SEQRES 30 A 385 LEU LYS LYS VAL LEU GLN GLY ILE HET NA A1004 1 HET NA A1005 1 HET PLP A1001 16 HET EDO A1002 4 HET EDO A1003 4 HETNAM NA SODIUM ION HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NA 2(NA 1+) FORMUL 4 PLP C8 H10 N O6 P FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *516(H2 O) HELIX 1 1 THR A 34 VAL A 39 1 6 HELIX 2 2 HIS A 46 GLU A 58 1 13 HELIX 3 3 ASN A 69 ASN A 82 1 14 HELIX 4 4 THR A 93 LYS A 111 1 19 HELIX 5 5 THR A 130 THR A 137 1 8 HELIX 6 6 GLN A 139 LYS A 144 1 6 HELIX 7 7 PRO A 145 GLU A 147 5 3 HELIX 8 8 ASN A 160 MET A 168 1 9 HELIX 9 9 THR A 190 TYR A 204 1 15 HELIX 10 10 PHE A 224 GLY A 230 1 7 HELIX 11 11 ALA A 239 GLY A 244 5 6 HELIX 12 12 ASN A 272 THR A 287 1 16 HELIX 13 13 GLY A 290 TYR A 313 1 24 HELIX 14 14 SER A 335 ASN A 346 1 12 HELIX 15 15 GLU A 367 GLN A 383 1 17 SHEET 1 A 4 PHE A 14 LYS A 18 0 SHEET 2 A 4 TRP A 21 ASP A 24 -1 O TYR A 23 N TYR A 16 SHEET 3 A 4 ALA A 29 ASP A 32 -1 O TYR A 30 N ILE A 22 SHEET 4 A 4 LEU A 348 LEU A 349 1 O LEU A 349 N LEU A 31 SHEET 1 B 7 LYS A 87 ALA A 91 0 SHEET 2 B 7 GLY A 249 VAL A 253 -1 O VAL A 253 N LYS A 87 SHEET 3 B 7 VAL A 235 THR A 238 -1 N THR A 238 O ALA A 250 SHEET 4 B 7 LEU A 207 ASP A 211 1 N PHE A 210 O VAL A 235 SHEET 5 B 7 VAL A 172 LEU A 177 1 N VAL A 175 O VAL A 209 SHEET 6 B 7 ARG A 118 ALA A 122 1 N LEU A 120 O PHE A 176 SHEET 7 B 7 PHE A 153 PHE A 156 1 O GLU A 154 N ILE A 119 SHEET 1 C 2 ILE A 180 GLN A 181 0 SHEET 2 C 2 VAL A 187 PRO A 188 -1 O VAL A 187 N GLN A 181 SHEET 1 D 4 VAL A 316 MET A 322 0 SHEET 2 D 4 MET A 325 PHE A 330 -1 O GLY A 327 N ARG A 320 SHEET 3 D 4 THR A 357 PHE A 360 -1 O PHE A 360 N ILE A 326 SHEET 4 D 4 VAL A 351 ALA A 353 -1 N VAL A 351 O ARG A 359 LINK O LYS A 310 NA NA A1004 1555 1555 2.24 LINK O TYR A 313 NA NA A1004 1555 1555 2.39 LINK O VAL A 316 NA NA A1004 1555 1555 2.36 LINK NA NA A1004 O HOH A1071 1555 1555 2.44 LINK NA NA A1004 O HOH A1073 1555 1555 2.43 LINK NA NA A1005 O HOH A1043 1555 1555 2.40 LINK NA NA A1005 O HOH A1071 1555 1555 2.31 LINK NA NA A1005 O HOH A1203 1555 1555 2.33 LINK NA NA A1005 O HOH A1392 1555 4457 2.35 LINK NA NA A1005 O HOH A1474 1555 4457 2.35 CISPEP 1 GLU A 147 PRO A 148 0 0.08 SITE 1 AC1 7 LYS A 310 TYR A 313 VAL A 316 NA A1005 SITE 2 AC1 7 HOH A1043 HOH A1071 HOH A1073 SITE 1 AC2 7 NA A1004 HOH A1043 HOH A1071 HOH A1073 SITE 2 AC2 7 HOH A1203 HOH A1392 HOH A1474 SITE 1 AC3 18 THR A 93 GLY A 94 THR A 95 PHE A 126 SITE 2 AC3 18 HIS A 127 GLU A 178 GLU A 183 ASP A 211 SITE 3 AC3 18 VAL A 213 GLN A 214 LYS A 240 THR A 268 SITE 4 AC3 18 HOH A1024 HOH A1029 HOH A1030 HOH A1037 SITE 5 AC3 18 HOH A1040 HOH A1075 SITE 1 AC4 6 GLU A 294 LYS A 298 LEU A 364 THR A 365 SITE 2 AC4 6 HOH A1173 HOH A1336 SITE 1 AC5 5 ASP A 32 SER A 35 ASN A 40 HIS A 44 SITE 2 AC5 5 PRO A 363 CRYST1 67.222 115.697 52.448 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014876 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008643 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019067 0.00000