HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-06 2E5H TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN ZINC FINGER CCHC-TYPE AND TITLE 2 RNA BINDING MOTIF 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 6 SYNONYM: U11/U12 SNRNP 31 KDA PROTEIN, U11/U12-31K; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZCRB1; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P060417-20 KEYWDS RRM DOMAIN, RBD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.IIBUCHI,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2E5H 1 REMARK SEQADV REVDAT 2 24-FEB-09 2E5H 1 VERSN REVDAT 1 26-JUN-07 2E5H 0 JRNL AUTH H.IIBUCHI,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN ZINC FINGER JRNL TITL 2 CCHC-TYPE AND RNA BINDING MOTIF 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT,P (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2E5H COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000026249. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY,TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A -2 41.55 34.47 REMARK 500 1 LEU A 5 159.38 -46.02 REMARK 500 1 PRO A 7 4.21 -69.76 REMARK 500 1 SER A 8 148.62 -33.80 REMARK 500 1 THR A 11 143.35 -34.63 REMARK 500 1 PRO A 18 84.43 -69.76 REMARK 500 1 ASP A 46 -73.86 -74.63 REMARK 500 1 VAL A 53 102.49 -52.84 REMARK 500 1 PHE A 77 27.93 41.19 REMARK 500 1 ALA A 86 91.04 -67.45 REMARK 500 2 SER A -4 81.85 -64.09 REMARK 500 2 SER A -2 -51.71 -128.65 REMARK 500 2 SER A 2 42.09 -93.82 REMARK 500 2 ALA A 6 49.76 74.47 REMARK 500 2 TYR A 13 98.81 -68.71 REMARK 500 2 PRO A 18 80.00 -69.71 REMARK 500 2 PHE A 19 -29.25 -38.73 REMARK 500 2 LEU A 21 -177.53 -68.91 REMARK 500 2 TYR A 33 -60.21 -102.01 REMARK 500 2 ASP A 44 176.46 -52.73 REMARK 500 2 LYS A 45 -61.44 -98.20 REMARK 500 2 ASP A 46 -71.51 -66.01 REMARK 500 2 ARG A 79 113.15 -174.05 REMARK 500 3 SER A -4 135.31 -170.18 REMARK 500 3 PRO A 18 85.71 -69.71 REMARK 500 3 ASP A 44 178.07 -58.02 REMARK 500 3 ARG A 79 109.54 -165.81 REMARK 500 4 SER A -1 106.25 -173.91 REMARK 500 4 LEU A 5 50.30 -115.80 REMARK 500 4 PRO A 18 87.12 -69.73 REMARK 500 4 PHE A 77 25.90 42.78 REMARK 500 4 ARG A 79 110.02 -167.08 REMARK 500 4 VAL A 80 104.30 -44.62 REMARK 500 5 SER A -5 110.13 -162.13 REMARK 500 5 ALA A 6 54.82 -116.80 REMARK 500 5 THR A 11 132.88 -36.27 REMARK 500 5 PRO A 18 79.99 -69.78 REMARK 500 5 ASP A 44 175.83 -56.70 REMARK 500 5 ARG A 79 108.07 -170.02 REMARK 500 5 VAL A 80 106.88 -48.47 REMARK 500 6 SER A -5 130.72 -39.60 REMARK 500 6 SER A -2 99.08 -49.15 REMARK 500 6 PRO A 18 86.42 -69.80 REMARK 500 6 ASP A 44 178.04 -49.62 REMARK 500 6 ASP A 46 -69.90 -99.55 REMARK 500 6 VAL A 53 109.36 -51.55 REMARK 500 6 ARG A 79 110.17 -164.92 REMARK 500 6 VAL A 80 108.52 -48.26 REMARK 500 7 PRO A 7 3.55 -69.75 REMARK 500 7 SER A 8 150.47 -34.04 REMARK 500 REMARK 500 THIS ENTRY HAS 164 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSG002000344.1 RELATED DB: TARGETDB DBREF 2E5H A 1 87 UNP Q8TBF4 ZCRB1_HUMAN 1 87 SEQADV 2E5H GLY A -6 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -5 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -4 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H GLY A -3 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -2 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -1 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H GLY A 0 UNP Q8TBF4 CLONING ARTIFACT SEQRES 1 A 94 GLY SER SER GLY SER SER GLY MET SER GLY GLY LEU ALA SEQRES 2 A 94 PRO SER LYS SER THR VAL TYR VAL SER ASN LEU PRO PHE SEQRES 3 A 94 SER LEU THR ASN ASN ASP LEU TYR ARG ILE PHE SER LYS SEQRES 4 A 94 TYR GLY LYS VAL VAL LYS VAL THR ILE MET LYS ASP LYS SEQRES 5 A 94 ASP THR ARG LYS SER LYS GLY VAL ALA PHE ILE LEU PHE SEQRES 6 A 94 LEU ASP LYS ASP SER ALA GLN ASN CYS THR ARG ALA ILE SEQRES 7 A 94 ASN ASN LYS GLN LEU PHE GLY ARG VAL ILE LYS ALA SER SEQRES 8 A 94 ILE ALA ILE HELIX 1 1 THR A 22 PHE A 30 1 9 HELIX 2 2 ASP A 60 ILE A 71 1 12 SHEET 1 A 5 VAL A 36 ILE A 41 0 SHEET 2 A 5 ALA A 54 PHE A 58 -1 O PHE A 55 N THR A 40 SHEET 3 A 5 VAL A 12 SER A 15 -1 N VAL A 14 O ALA A 54 SHEET 4 A 5 ARG A 79 ILE A 85 -1 O SER A 84 N TYR A 13 SHEET 5 A 5 LYS A 74 LEU A 76 -1 N LEU A 76 O ARG A 79 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1