HEADER HYDROLASE 30-JAN-07 2EA2
TITLE H-METAP2 COMPLEXED WITH A773812
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: METHIONINE AMINOPEPTIDASE 2;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUES 110-478;
COMPND 5 SYNONYM: METAP 2, PEPTIDASE M 2, INITIATION FACTOR 2-ASSOCIATED 67
COMPND 6 KDA GLYCOPROTEIN, P67, P67EIF2;
COMPND 7 EC: 3.4.11.18;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID
KEYWDS PROTEIN-LIGAND COMPLEX, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR C.H.PARK
REVDAT 4 23-OCT-24 2EA2 1 REMARK
REVDAT 3 25-OCT-23 2EA2 1 REMARK SEQADV LINK
REVDAT 2 24-FEB-09 2EA2 1 VERSN
REVDAT 1 05-FEB-08 2EA2 0
JRNL AUTH G.T.WANG,R.A.MANTEI,M.KAWAI,J.S.TEDROW,D.M.BARNES,J.WANG,
JRNL AUTH 2 Q.ZHANG,P.LOU,L.A.GARCIA,J.BOUSKA,M.YATES,C.PARK,R.A.JUDGE,
JRNL AUTH 3 R.LESNIEWSKI,G.S.SHEPPARD,R.L.BELL
JRNL TITL LEAD OPTIMIZATION OF METHIONINE AMINOPEPTIDASE-2 (METAP2)
JRNL TITL 2 INHIBITORS CONTAINING SULFONAMIDES OF 5,6-DISUBSTITUTED
JRNL TITL 3 ANTHRANILIC ACIDS
JRNL REF BIOORG.MED.CHEM.LETT. V. 17 2817 2007
JRNL REFN ISSN 0960-894X
JRNL PMID 17350258
JRNL DOI 10.1016/J.BMCL.2007.02.062
REMARK 2
REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNX 2002
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS
REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA,
REMARK 3 : YIP,DZAKULA)
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.91
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 241860.870
REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.7
REMARK 3 NUMBER OF REFLECTIONS : 14361
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.203
REMARK 3 R VALUE (WORKING SET) : 0.191
REMARK 3 FREE R VALUE : 0.255
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200
REMARK 3 FREE R VALUE TEST SET COUNT : 1467
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007
REMARK 3
REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA.
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 15848
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 10
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.59
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.20
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1093
REMARK 3 BIN R VALUE (WORKING SET) : 0.2140
REMARK 3 BIN FREE R VALUE : 0.3110
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.20
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 111
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2895
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 25
REMARK 3 SOLVENT ATOMS : 291
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 29.80
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.00
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.85000
REMARK 3 B22 (A**2) : 1.59000
REMARK 3 B33 (A**2) : -2.44000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26
REMARK 3 ESD FROM SIGMAA (A) : 0.20
REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.37
REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.006
REMARK 3 BOND ANGLES (DEGREES) : 1.300
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80
REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : 0.350 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE (A**2) : 0.660 ; 2.000
REMARK 3 SIDE-CHAIN BOND (A**2) : 0.300 ; 2.000
REMARK 3 SIDE-CHAIN ANGLE (A**2) : 0.520 ; 2.500
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : FLAT MODEL
REMARK 3 KSOL : 0.36
REMARK 3 BSOL : 48.33
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM
REMARK 3 PARAMETER FILE 2 : A77.PARAM
REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM
REMARK 3 PARAMETER FILE 4 : ION.PARAM
REMARK 3 PARAMETER FILE 5 : NULL
REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP
REMARK 3 TOPOLOGY FILE 2 : A77.TOP
REMARK 3 TOPOLOGY FILE 3 : NULL
REMARK 3 TOPOLOGY FILE 4 : NULL
REMARK 3 TOPOLOGY FILE 5 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2EA2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-07.
REMARK 100 THE DEPOSITION ID IS D_1000026414.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 12-NOV-02
REMARK 200 TEMPERATURE (KELVIN) : 110.0
REMARK 200 PH : 6.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.54
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : MIRROR
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15352
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500
REMARK 200 RESOLUTION RANGE LOW (A) : 20.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9
REMARK 200 DATA REDUNDANCY : 6.500
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.07700
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.3000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59
REMARK 200 COMPLETENESS FOR SHELL (%) : 77.2
REMARK 200 DATA REDUNDANCY IN SHELL : 6.00
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : 0.25200
REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.200
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: CNS
REMARK 200 STARTING MODEL: PDB ENTRY 1YW7
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 54.56
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30 % ISOPROPANOL, 0.1M NA CITRATE,
REMARK 280 PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -X,Y,-Z+1/2
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.42750
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.42750
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.86050
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.53000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.86050
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.53000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.42750
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.86050
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.53000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.42750
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.86050
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.53000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 OG1 THR A 151 OG1 THR A 151 4555 1.58
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 PRO A 345 C - N - CA ANGL. DEV. = 12.9 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 114 -74.63 -44.37
REMARK 500 PRO A 116 125.06 -35.48
REMARK 500 SER A 117 -24.38 -143.32
REMARK 500 THR A 140 -145.36 -122.72
REMARK 500 GLN A 141 -76.20 -53.51
REMARK 500 ASP A 142 44.53 -69.04
REMARK 500 ARG A 144 98.02 -44.05
REMARK 500 THR A 151 12.93 -142.32
REMARK 500 SER A 152 157.61 -48.31
REMARK 500 GLU A 210 123.52 -32.93
REMARK 500 CYS A 223 43.02 -146.67
REMARK 500 ASN A 226 -107.62 41.03
REMARK 500 ASP A 294 4.12 81.75
REMARK 500 ASN A 329 177.04 176.58
REMARK 500 PRO A 345 -83.23 -20.94
REMARK 500 ILE A 346 -14.32 97.08
REMARK 500 ILE A 347 -126.91 -127.40
REMARK 500 GLU A 351 -81.40 37.07
REMARK 500 ALA A 352 67.66 152.33
REMARK 500 MET A 378 179.66 70.68
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MN A 480 MN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 251 OD1
REMARK 620 2 ASP A 251 OD2 55.7
REMARK 620 3 ASP A 262 OD2 91.6 146.0
REMARK 620 4 GLU A 459 OE2 101.9 105.0 89.3
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MN A 481 MN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 262 OD1
REMARK 620 2 HIS A 331 NE2 89.1
REMARK 620 3 GLU A 364 OE1 162.1 90.7
REMARK 620 4 GLU A 459 OE1 81.1 114.9 82.8
REMARK 620 5 F77 A 482 O11 83.9 67.6 112.4 164.7
REMARK 620 N 1 2 3 4
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 480
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 481
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F77 A 482
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1YW7 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN COMPLEXED WITH A444148
REMARK 900 RELATED ID: 1YW8 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN COMPLEXED WITH A751277
REMARK 900 RELATED ID: 1YW9 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN COMPLEXED WITH A849519
REMARK 900 RELATED ID: 2GA2 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN COMPLEXED WITH A193400
REMARK 900 RELATED ID: 2EA4 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN COMPLEXED WITH A797859
DBREF 2EA2 A 110 478 UNP P50579 AMPM2_HUMAN 110 478
SEQADV 2EA2 ILE A 347 UNP P50579 VAL 347 CONFLICT
SEQRES 1 A 369 LYS VAL GLN THR ASP PRO PRO SER VAL PRO ILE CYS ASP
SEQRES 2 A 369 LEU TYR PRO ASN GLY VAL PHE PRO LYS GLY GLN GLU CYS
SEQRES 3 A 369 GLU TYR PRO PRO THR GLN ASP GLY ARG THR ALA ALA TRP
SEQRES 4 A 369 ARG THR THR SER GLU GLU LYS LYS ALA LEU ASP GLN ALA
SEQRES 5 A 369 SER GLU GLU ILE TRP ASN ASP PHE ARG GLU ALA ALA GLU
SEQRES 6 A 369 ALA HIS ARG GLN VAL ARG LYS TYR VAL MET SER TRP ILE
SEQRES 7 A 369 LYS PRO GLY MET THR MET ILE GLU ILE CYS GLU LYS LEU
SEQRES 8 A 369 GLU ASP CYS SER ARG LYS LEU ILE LYS GLU ASN GLY LEU
SEQRES 9 A 369 ASN ALA GLY LEU ALA PHE PRO THR GLY CYS SER LEU ASN
SEQRES 10 A 369 ASN CYS ALA ALA HIS TYR THR PRO ASN ALA GLY ASP THR
SEQRES 11 A 369 THR VAL LEU GLN TYR ASP ASP ILE CYS LYS ILE ASP PHE
SEQRES 12 A 369 GLY THR HIS ILE SER GLY ARG ILE ILE ASP CYS ALA PHE
SEQRES 13 A 369 THR VAL THR PHE ASN PRO LYS TYR ASP THR LEU LEU LYS
SEQRES 14 A 369 ALA VAL LYS ASP ALA THR ASN THR GLY ILE LYS CYS ALA
SEQRES 15 A 369 GLY ILE ASP VAL ARG LEU CYS ASP VAL GLY GLU ALA ILE
SEQRES 16 A 369 GLN GLU VAL MET GLU SER TYR GLU VAL GLU ILE ASP GLY
SEQRES 17 A 369 LYS THR TYR GLN VAL LYS PRO ILE ARG ASN LEU ASN GLY
SEQRES 18 A 369 HIS SER ILE GLY GLN TYR ARG ILE HIS ALA GLY LYS THR
SEQRES 19 A 369 VAL PRO ILE ILE LYS GLY GLY GLU ALA THR ARG MET GLU
SEQRES 20 A 369 GLU GLY GLU VAL TYR ALA ILE GLU THR PHE GLY SER THR
SEQRES 21 A 369 GLY LYS GLY VAL VAL HIS ASP ASP MET GLU CYS SER HIS
SEQRES 22 A 369 TYR MET LYS ASN PHE ASP VAL GLY HIS VAL PRO ILE ARG
SEQRES 23 A 369 LEU PRO ARG THR LYS HIS LEU LEU ASN VAL ILE ASN GLU
SEQRES 24 A 369 ASN PHE GLY THR LEU ALA PHE CYS ARG ARG TRP LEU ASP
SEQRES 25 A 369 ARG LEU GLY GLU SER LYS TYR LEU MET ALA LEU LYS ASN
SEQRES 26 A 369 LEU CYS ASP LEU GLY ILE VAL ASP PRO TYR PRO PRO LEU
SEQRES 27 A 369 CYS ASP ILE LYS GLY SER TYR THR ALA GLN PHE GLU HIS
SEQRES 28 A 369 THR ILE LEU LEU ARG PRO THR CYS LYS GLU VAL VAL SER
SEQRES 29 A 369 ARG GLY ASP ASP TYR
HET MN A 480 1
HET MN A 481 1
HET F77 A 482 23
HETNAM MN MANGANESE (II) ION
HETNAM F77 3-ETHYL-6-{[(4-FLUOROPHENYL)SULFONYL]AMINO}-2-
HETNAM 2 F77 METHYLBENZOIC ACID
HETSYN F77 3-ETHYL-6-(4-FLUORO-BENZENESULFONYLAMINO)-2-METHYL-
HETSYN 2 F77 BENZOIC ACID
FORMUL 2 MN 2(MN 2+)
FORMUL 4 F77 C16 H16 F N O4 S
FORMUL 5 HOH *291(H2 O)
HELIX 1 1 PRO A 119 TYR A 124 1 6
HELIX 2 2 SER A 152 SER A 162 1 11
HELIX 3 3 SER A 162 ILE A 187 1 26
HELIX 4 4 THR A 192 ILE A 208 1 17
HELIX 5 5 ASN A 270 LYS A 272 5 3
HELIX 6 6 TYR A 273 ALA A 291 1 19
HELIX 7 7 ARG A 296 SER A 310 1 15
HELIX 8 8 LEU A 396 PHE A 410 1 15
HELIX 9 9 ARG A 417 ARG A 422 1 6
HELIX 10 10 TYR A 428 LEU A 438 1 11
SHEET 1 A 5 GLN A 133 CYS A 135 0
SHEET 2 A 5 LYS A 469 VAL A 471 -1 O LYS A 469 N CYS A 135
SHEET 3 A 5 THR A 455 LEU A 464 -1 N LEU A 463 O GLU A 470
SHEET 4 A 5 VAL A 360 SER A 368 -1 N TYR A 361 O ILE A 462
SHEET 5 A 5 LYS A 323 PRO A 324 -1 N LYS A 323 O SER A 368
SHEET 1 B 6 GLN A 133 CYS A 135 0
SHEET 2 B 6 LYS A 469 VAL A 471 -1 O LYS A 469 N CYS A 135
SHEET 3 B 6 THR A 455 LEU A 464 -1 N LEU A 463 O GLU A 470
SHEET 4 B 6 VAL A 360 SER A 368 -1 N TYR A 361 O ILE A 462
SHEET 5 B 6 GLY A 330 SER A 332 -1 N HIS A 331 O ALA A 362
SHEET 6 B 6 THR A 343 VAL A 344 -1 O VAL A 344 N GLY A 330
SHEET 1 C 3 ALA A 215 GLY A 222 0
SHEET 2 C 3 CYS A 248 ILE A 256 -1 O ASP A 251 N GLY A 222
SHEET 3 C 3 ARG A 259 VAL A 267 -1 O VAL A 267 N CYS A 248
SHEET 1 D 3 CYS A 228 ALA A 230 0
SHEET 2 D 3 LEU A 447 CYS A 448 -1 O LEU A 447 N ALA A 230
SHEET 3 D 3 HIS A 375 ASP A 376 -1 N HIS A 375 O CYS A 448
SHEET 1 E 2 GLU A 312 ILE A 315 0
SHEET 2 E 2 LYS A 318 GLN A 321 -1 O TYR A 320 N VAL A 313
SHEET 1 F 3 PHE A 415 CYS A 416 0
SHEET 2 F 3 HIS A 382 LYS A 385 -1 N TYR A 383 O PHE A 415
SHEET 3 F 3 VAL A 441 TYR A 444 -1 O TYR A 444 N HIS A 382
SSBOND 1 CYS A 228 CYS A 448 1555 1555 2.03
LINK OD1 ASP A 251 MN MN A 480 1555 1555 2.46
LINK OD2 ASP A 251 MN MN A 480 1555 1555 2.23
LINK OD2 ASP A 262 MN MN A 480 1555 1555 2.23
LINK OD1 ASP A 262 MN MN A 481 1555 1555 2.16
LINK NE2 HIS A 331 MN MN A 481 1555 1555 2.48
LINK OE1 GLU A 364 MN MN A 481 1555 1555 2.42
LINK OE2 GLU A 459 MN MN A 480 1555 1555 2.18
LINK OE1 GLU A 459 MN MN A 481 1555 1555 2.17
LINK MN MN A 481 O11 F77 A 482 1555 1555 2.36
SITE 1 AC1 5 ASP A 251 ASP A 262 GLU A 459 MN A 481
SITE 2 AC1 5 HOH A 613
SITE 1 AC2 6 ASP A 262 HIS A 331 GLU A 364 GLU A 459
SITE 2 AC2 6 MN A 480 F77 A 482
SITE 1 AC3 14 ALA A 230 HIS A 231 ASP A 262 LEU A 328
SITE 2 AC3 14 ASN A 329 HIS A 331 ILE A 338 HIS A 339
SITE 3 AC3 14 GLU A 364 PHE A 366 ALA A 414 TYR A 444
SITE 4 AC3 14 LEU A 447 MN A 481
CRYST1 89.721 99.060 100.855 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011146 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010095 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009915 0.00000