HEADER GENE REGULATION 09-FEB-07 2EC2 TITLE CRYSTAL STRUCTURE OF TRANSPOSASE FROM SULFOLOBUS TOKODAII COMPND MOL_ID: 1; COMPND 2 MOLECULE: 136AA LONG HYPOTHETICAL TRANSPOSASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TOKODAII; SOURCE 3 ORGANISM_TAXID: 111955; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PLASMID KEYWDS TRANSPOSASE, SULFOLOBUS TOKODAII, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR K.KAWAI,A.SUZUKI,S.KURAMITSU,R.MASUI,T.YAMANE REVDAT 3 25-OCT-23 2EC2 1 REMARK REVDAT 2 24-FEB-09 2EC2 1 VERSN REVDAT 1 27-FEB-07 2EC2 0 JRNL AUTH K.KAWAI,A.SUZUKI,S.KURAMITSU,R.MASUI,T.YAMANE JRNL TITL CRYSTAL STRUCTURE OF TRANSPOSASE FROM SULFOLOBUS TOKODAII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 17502 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 945 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1155 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6457 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -1.13000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : -1.46000 REMARK 3 B13 (A**2) : -0.56000 REMARK 3 B23 (A**2) : -0.16000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.531 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.383 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.591 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.812 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6667 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9006 ; 1.385 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 771 ; 6.990 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 293 ;34.636 ;22.662 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1224 ;21.528 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;18.009 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 957 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4898 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3199 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4483 ; 0.318 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 229 ; 0.157 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 117 ; 0.252 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.251 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3944 ; 0.783 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6290 ; 1.301 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3137 ; 1.513 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2716 ; 2.192 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2EC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026483. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS VII REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18474 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 80.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.23000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2F5G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4000, 0.2M LITHIUM SULFATE, REMARK 280 0.1M SODIUM ACETATE, PH 4.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 131 REMARK 465 GLU A 132 REMARK 465 ASN A 133 REMARK 465 GLU A 134 REMARK 465 GLU A 135 REMARK 465 ASP A 136 REMARK 465 GLU B 132 REMARK 465 ASN B 133 REMARK 465 GLU B 134 REMARK 465 GLU B 135 REMARK 465 ASP B 136 REMARK 465 LYS C 131 REMARK 465 GLU C 132 REMARK 465 ASN C 133 REMARK 465 GLU C 134 REMARK 465 GLU C 135 REMARK 465 ASP C 136 REMARK 465 TRP D 129 REMARK 465 ALA D 130 REMARK 465 LYS D 131 REMARK 465 GLU D 132 REMARK 465 ASN D 133 REMARK 465 GLU D 134 REMARK 465 GLU D 135 REMARK 465 ASP D 136 REMARK 465 MET E 1 REMARK 465 LYS E 131 REMARK 465 GLU E 132 REMARK 465 ASN E 133 REMARK 465 GLU E 134 REMARK 465 GLU E 135 REMARK 465 ASP E 136 REMARK 465 ALA F 130 REMARK 465 LYS F 131 REMARK 465 GLU F 132 REMARK 465 ASN F 133 REMARK 465 GLU F 134 REMARK 465 GLU F 135 REMARK 465 ASP F 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 24 -58.00 -133.74 REMARK 500 ARG A 25 85.77 -27.02 REMARK 500 LYS A 26 58.77 22.90 REMARK 500 ALA A 33 -32.48 -36.47 REMARK 500 PRO A 58 -39.74 -28.22 REMARK 500 PHE A 92 48.61 -143.42 REMARK 500 SER A 98 39.72 -77.46 REMARK 500 THR A 99 -36.17 -161.76 REMARK 500 ARG A 106 37.38 -99.93 REMARK 500 ARG B 24 27.26 -141.12 REMARK 500 ARG B 25 -96.35 -74.63 REMARK 500 VAL B 27 -77.54 -55.31 REMARK 500 LEU B 28 -79.95 -59.96 REMARK 500 ASN B 100 8.66 42.60 REMARK 500 ALA B 130 89.48 -65.67 REMARK 500 SER C 5 112.41 -169.88 REMARK 500 ARG C 24 -110.46 -11.63 REMARK 500 VAL C 27 -80.84 -137.17 REMARK 500 ASN C 100 7.83 55.90 REMARK 500 THR D 6 -165.59 -123.02 REMARK 500 ARG D 24 -50.28 -129.36 REMARK 500 ARG D 25 2.36 -46.16 REMARK 500 LYS D 26 11.24 168.67 REMARK 500 VAL D 27 -54.61 -23.37 REMARK 500 ALA D 53 145.05 -171.43 REMARK 500 LEU D 54 77.31 -151.75 REMARK 500 VAL D 56 77.35 -114.14 REMARK 500 PRO D 68 145.34 -38.00 REMARK 500 PHE D 92 59.78 -97.80 REMARK 500 ASN D 115 111.41 -167.07 REMARK 500 THR E 6 -146.09 -112.06 REMARK 500 ARG E 24 43.69 -63.87 REMARK 500 ARG E 25 19.65 -67.66 REMARK 500 LEU E 54 110.58 -171.12 REMARK 500 PHE E 92 83.76 -150.41 REMARK 500 LYS E 97 -77.70 -62.04 REMARK 500 SER E 98 28.40 -64.49 REMARK 500 THR E 99 -12.47 -149.43 REMARK 500 THR F 6 -155.46 -98.02 REMARK 500 ARG F 24 33.43 -69.09 REMARK 500 ARG F 25 30.87 -74.54 REMARK 500 PRO F 58 -30.85 -37.78 REMARK 500 PRO F 69 9.09 -67.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG D 25 LYS D 26 148.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 137 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 137 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 137 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 137 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 137 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 138 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 139 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 138 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F5G RELATED DB: PDB REMARK 900 IS200 TRANSPOSASE DBREF 2EC2 A 1 136 UNP Q974H8 Q974H8_SULTO 1 136 DBREF 2EC2 B 1 136 UNP Q974H8 Q974H8_SULTO 1 136 DBREF 2EC2 C 1 136 UNP Q974H8 Q974H8_SULTO 1 136 DBREF 2EC2 D 1 136 UNP Q974H8 Q974H8_SULTO 1 136 DBREF 2EC2 E 1 136 UNP Q974H8 Q974H8_SULTO 1 136 DBREF 2EC2 F 1 136 UNP Q974H8 Q974H8_SULTO 1 136 SEQRES 1 A 136 MET GLU TYR LYS SER THR ARG HIS ALA LYS TYR LEU CYS SEQRES 2 A 136 ASN TYR HIS PHE VAL TRP ILE PRO LYS TYR ARG ARG LYS SEQRES 3 A 136 VAL LEU THR GLY GLU VAL ALA GLU TYR THR LYS GLU VAL SEQRES 4 A 136 LEU ARG THR ILE ALA GLU GLU LEU GLY CYS GLU VAL LEU SEQRES 5 A 136 ALA LEU GLU VAL MET PRO ASP HIS ILE HIS LEU PHE VAL SEQRES 6 A 136 ASN CYS PRO PRO ARG TYR ALA PRO SER TYR LEU ALA ASN SEQRES 7 A 136 TYR PHE LYS GLY LYS SER ALA ARG LEU ILE LEU LYS LYS SEQRES 8 A 136 PHE GLN GLU LEU LYS LYS SER THR ASN GLY LYS LEU TRP SEQRES 9 A 136 THR ARG SER TYR PHE VAL SER THR SER GLY ASN VAL SER SEQRES 10 A 136 SER GLU THR ILE LYS LYS TYR ILE GLU GLU GLN TRP ALA SEQRES 11 A 136 LYS GLU ASN GLU GLU ASP SEQRES 1 B 136 MET GLU TYR LYS SER THR ARG HIS ALA LYS TYR LEU CYS SEQRES 2 B 136 ASN TYR HIS PHE VAL TRP ILE PRO LYS TYR ARG ARG LYS SEQRES 3 B 136 VAL LEU THR GLY GLU VAL ALA GLU TYR THR LYS GLU VAL SEQRES 4 B 136 LEU ARG THR ILE ALA GLU GLU LEU GLY CYS GLU VAL LEU SEQRES 5 B 136 ALA LEU GLU VAL MET PRO ASP HIS ILE HIS LEU PHE VAL SEQRES 6 B 136 ASN CYS PRO PRO ARG TYR ALA PRO SER TYR LEU ALA ASN SEQRES 7 B 136 TYR PHE LYS GLY LYS SER ALA ARG LEU ILE LEU LYS LYS SEQRES 8 B 136 PHE GLN GLU LEU LYS LYS SER THR ASN GLY LYS LEU TRP SEQRES 9 B 136 THR ARG SER TYR PHE VAL SER THR SER GLY ASN VAL SER SEQRES 10 B 136 SER GLU THR ILE LYS LYS TYR ILE GLU GLU GLN TRP ALA SEQRES 11 B 136 LYS GLU ASN GLU GLU ASP SEQRES 1 C 136 MET GLU TYR LYS SER THR ARG HIS ALA LYS TYR LEU CYS SEQRES 2 C 136 ASN TYR HIS PHE VAL TRP ILE PRO LYS TYR ARG ARG LYS SEQRES 3 C 136 VAL LEU THR GLY GLU VAL ALA GLU TYR THR LYS GLU VAL SEQRES 4 C 136 LEU ARG THR ILE ALA GLU GLU LEU GLY CYS GLU VAL LEU SEQRES 5 C 136 ALA LEU GLU VAL MET PRO ASP HIS ILE HIS LEU PHE VAL SEQRES 6 C 136 ASN CYS PRO PRO ARG TYR ALA PRO SER TYR LEU ALA ASN SEQRES 7 C 136 TYR PHE LYS GLY LYS SER ALA ARG LEU ILE LEU LYS LYS SEQRES 8 C 136 PHE GLN GLU LEU LYS LYS SER THR ASN GLY LYS LEU TRP SEQRES 9 C 136 THR ARG SER TYR PHE VAL SER THR SER GLY ASN VAL SER SEQRES 10 C 136 SER GLU THR ILE LYS LYS TYR ILE GLU GLU GLN TRP ALA SEQRES 11 C 136 LYS GLU ASN GLU GLU ASP SEQRES 1 D 136 MET GLU TYR LYS SER THR ARG HIS ALA LYS TYR LEU CYS SEQRES 2 D 136 ASN TYR HIS PHE VAL TRP ILE PRO LYS TYR ARG ARG LYS SEQRES 3 D 136 VAL LEU THR GLY GLU VAL ALA GLU TYR THR LYS GLU VAL SEQRES 4 D 136 LEU ARG THR ILE ALA GLU GLU LEU GLY CYS GLU VAL LEU SEQRES 5 D 136 ALA LEU GLU VAL MET PRO ASP HIS ILE HIS LEU PHE VAL SEQRES 6 D 136 ASN CYS PRO PRO ARG TYR ALA PRO SER TYR LEU ALA ASN SEQRES 7 D 136 TYR PHE LYS GLY LYS SER ALA ARG LEU ILE LEU LYS LYS SEQRES 8 D 136 PHE GLN GLU LEU LYS LYS SER THR ASN GLY LYS LEU TRP SEQRES 9 D 136 THR ARG SER TYR PHE VAL SER THR SER GLY ASN VAL SER SEQRES 10 D 136 SER GLU THR ILE LYS LYS TYR ILE GLU GLU GLN TRP ALA SEQRES 11 D 136 LYS GLU ASN GLU GLU ASP SEQRES 1 E 136 MET GLU TYR LYS SER THR ARG HIS ALA LYS TYR LEU CYS SEQRES 2 E 136 ASN TYR HIS PHE VAL TRP ILE PRO LYS TYR ARG ARG LYS SEQRES 3 E 136 VAL LEU THR GLY GLU VAL ALA GLU TYR THR LYS GLU VAL SEQRES 4 E 136 LEU ARG THR ILE ALA GLU GLU LEU GLY CYS GLU VAL LEU SEQRES 5 E 136 ALA LEU GLU VAL MET PRO ASP HIS ILE HIS LEU PHE VAL SEQRES 6 E 136 ASN CYS PRO PRO ARG TYR ALA PRO SER TYR LEU ALA ASN SEQRES 7 E 136 TYR PHE LYS GLY LYS SER ALA ARG LEU ILE LEU LYS LYS SEQRES 8 E 136 PHE GLN GLU LEU LYS LYS SER THR ASN GLY LYS LEU TRP SEQRES 9 E 136 THR ARG SER TYR PHE VAL SER THR SER GLY ASN VAL SER SEQRES 10 E 136 SER GLU THR ILE LYS LYS TYR ILE GLU GLU GLN TRP ALA SEQRES 11 E 136 LYS GLU ASN GLU GLU ASP SEQRES 1 F 136 MET GLU TYR LYS SER THR ARG HIS ALA LYS TYR LEU CYS SEQRES 2 F 136 ASN TYR HIS PHE VAL TRP ILE PRO LYS TYR ARG ARG LYS SEQRES 3 F 136 VAL LEU THR GLY GLU VAL ALA GLU TYR THR LYS GLU VAL SEQRES 4 F 136 LEU ARG THR ILE ALA GLU GLU LEU GLY CYS GLU VAL LEU SEQRES 5 F 136 ALA LEU GLU VAL MET PRO ASP HIS ILE HIS LEU PHE VAL SEQRES 6 F 136 ASN CYS PRO PRO ARG TYR ALA PRO SER TYR LEU ALA ASN SEQRES 7 F 136 TYR PHE LYS GLY LYS SER ALA ARG LEU ILE LEU LYS LYS SEQRES 8 F 136 PHE GLN GLU LEU LYS LYS SER THR ASN GLY LYS LEU TRP SEQRES 9 F 136 THR ARG SER TYR PHE VAL SER THR SER GLY ASN VAL SER SEQRES 10 F 136 SER GLU THR ILE LYS LYS TYR ILE GLU GLU GLN TRP ALA SEQRES 11 F 136 LYS GLU ASN GLU GLU ASP HET SO4 A 137 5 HET SO4 A 138 5 HET SO4 A 139 5 HET SO4 B 137 5 HET SO4 B 138 5 HET SO4 D 137 5 HET SO4 E 137 5 HET SO4 F 137 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 8(O4 S 2-) HELIX 1 1 GLY A 30 LEU A 47 1 18 HELIX 2 2 ALA A 72 LYS A 91 1 20 HELIX 3 3 PHE A 92 SER A 98 1 7 HELIX 4 4 SER A 117 GLN A 128 1 12 HELIX 5 5 GLY B 30 GLY B 48 1 19 HELIX 6 6 ALA B 72 PHE B 92 1 21 HELIX 7 7 PHE B 92 ASN B 100 1 9 HELIX 8 8 SER B 117 ALA B 130 1 14 HELIX 9 9 GLY C 30 GLY C 48 1 19 HELIX 10 10 ALA C 72 PHE C 92 1 21 HELIX 11 11 PHE C 92 THR C 99 1 8 HELIX 12 12 SER C 117 ALA C 130 1 14 HELIX 13 13 THR D 29 GLY D 48 1 20 HELIX 14 14 ALA D 72 PHE D 92 1 21 HELIX 15 15 PHE D 92 ASN D 100 1 9 HELIX 16 16 SER D 117 GLN D 128 1 12 HELIX 17 17 GLY E 30 GLY E 48 1 19 HELIX 18 18 ALA E 72 PHE E 92 1 21 HELIX 19 19 PHE E 92 SER E 98 1 7 HELIX 20 20 SER E 117 ALA E 130 1 14 HELIX 21 21 GLU F 31 LEU F 47 1 17 HELIX 22 22 ALA F 72 PHE F 92 1 21 HELIX 23 23 PHE F 92 THR F 99 1 8 HELIX 24 24 SER F 117 GLN F 128 1 12 SHEET 1 A 6 LYS A 4 SER A 5 0 SHEET 2 A 6 ALA A 9 LEU A 12 -1 O TYR A 11 N LYS A 4 SHEET 3 A 6 TYR C 108 SER C 113 1 O VAL C 110 N LYS A 10 SHEET 4 A 6 ASN C 14 TRP C 19 -1 N VAL C 18 O PHE C 109 SHEET 5 A 6 ILE C 61 ASN C 66 -1 O ILE C 61 N TRP C 19 SHEET 6 A 6 GLU C 50 VAL C 56 -1 N LEU C 52 O PHE C 64 SHEET 1 B 6 GLU A 50 MET A 57 0 SHEET 2 B 6 HIS A 60 ASN A 66 -1 O PHE A 64 N ALA A 53 SHEET 3 B 6 ASN A 14 TRP A 19 -1 N TYR A 15 O VAL A 65 SHEET 4 B 6 TYR A 108 SER A 113 -1 O PHE A 109 N VAL A 18 SHEET 5 B 6 ALA C 9 LEU C 12 1 O LEU C 12 N THR A 112 SHEET 6 B 6 LYS C 4 SER C 5 -1 N LYS C 4 O TYR C 11 SHEET 1 C 6 LYS B 4 THR B 6 0 SHEET 2 C 6 ALA B 9 LEU B 12 -1 O TYR B 11 N LYS B 4 SHEET 3 C 6 TYR D 108 SER D 113 1 O VAL D 110 N LYS B 10 SHEET 4 C 6 ASN D 14 TRP D 19 -1 N VAL D 18 O PHE D 109 SHEET 5 C 6 HIS D 60 ASN D 66 -1 O LEU D 63 N PHE D 17 SHEET 6 C 6 GLU D 50 MET D 57 -1 N LEU D 52 O PHE D 64 SHEET 1 D 6 GLU B 50 MET B 57 0 SHEET 2 D 6 HIS B 60 ASN B 66 -1 O PHE B 64 N ALA B 53 SHEET 3 D 6 ASN B 14 TRP B 19 -1 N PHE B 17 O LEU B 63 SHEET 4 D 6 TYR B 108 SER B 113 -1 O PHE B 109 N VAL B 18 SHEET 5 D 6 ALA D 9 LEU D 12 1 O LYS D 10 N VAL B 110 SHEET 6 D 6 LYS D 4 SER D 5 -1 N LYS D 4 O TYR D 11 SHEET 1 E 6 LYS E 4 SER E 5 0 SHEET 2 E 6 ALA E 9 LEU E 12 -1 O TYR E 11 N LYS E 4 SHEET 3 E 6 TYR F 108 SER F 113 1 O VAL F 110 N LEU E 12 SHEET 4 E 6 ASN F 14 TRP F 19 -1 N HIS F 16 O SER F 111 SHEET 5 E 6 HIS F 60 ASN F 66 -1 O VAL F 65 N TYR F 15 SHEET 6 E 6 GLU F 50 MET F 57 -1 N MET F 57 O HIS F 60 SHEET 1 F 6 GLU E 50 VAL E 56 0 SHEET 2 F 6 ILE E 61 ASN E 66 -1 O PHE E 64 N ALA E 53 SHEET 3 F 6 ASN E 14 TRP E 19 -1 N PHE E 17 O LEU E 63 SHEET 4 F 6 TYR E 108 SER E 113 -1 O PHE E 109 N VAL E 18 SHEET 5 F 6 ALA F 9 LEU F 12 1 O LEU F 12 N THR E 112 SHEET 6 F 6 LYS F 4 SER F 5 -1 N LYS F 4 O TYR F 11 SSBOND 1 CYS A 49 CYS A 67 1555 1555 2.08 SSBOND 2 CYS B 49 CYS B 67 1555 1555 2.07 SSBOND 3 CYS C 49 CYS C 67 1555 1555 2.07 SSBOND 4 CYS D 49 CYS D 67 1555 1555 2.06 SSBOND 5 CYS E 49 CYS E 67 1555 1555 2.06 SSBOND 6 CYS F 49 CYS F 67 1555 1555 2.06 SITE 1 AC1 3 GLY F 82 LYS F 83 ARG F 86 SITE 1 AC2 4 ARG B 70 TYR B 71 LYS E 83 ARG E 86 SITE 1 AC3 2 GLY A 82 ARG A 86 SITE 1 AC4 2 LYS D 83 ARG D 86 SITE 1 AC5 2 LYS B 83 ARG B 86 SITE 1 AC6 3 LYS A 37 ARG A 41 LYS E 91 SITE 1 AC7 3 ARG A 7 HIS A 8 ARG C 106 SITE 1 AC8 3 THR B 6 HIS B 8 ALA B 9 CRYST1 55.118 66.566 69.472 107.96 104.39 110.72 P 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018143 0.006863 0.008515 0.00000 SCALE2 0.000000 0.016062 0.007812 0.00000 SCALE3 0.000000 0.000000 0.016525 0.00000