HEADER ANTIBIOTIC 16-FEB-07 2EEM TITLE SOLUTION STRUCTURE OF THE SYNTHETIC MYTILIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYTILIN-B; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE WAS IDENTIFIED IN MYTILUS SOURCE 4 GALLOPROVINCIALIS KEYWDS MUSSEL, ANTIVIRAL PEPTIDE, CYSTEIN STABILIZED ALPHA-BETA MOTIF, KEYWDS 2 DISULFIDE BOND, ANTIBIOTIC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.ROCH,Y.YANG,A.AUMELAS REVDAT 4 09-MAR-22 2EEM 1 REMARK REVDAT 3 24-FEB-09 2EEM 1 VERSN REVDAT 2 21-OCT-08 2EEM 1 JRNL REVDAT 1 09-OCT-07 2EEM 0 JRNL AUTH P.ROCH,Y.YANG,M.TOUBIANA,A.AUMELAS JRNL TITL NMR STRUCTURE OF MUSSEL MYTILIN, AND ANTIVIRAL-ANTIBACTERIAL JRNL TITL 2 ACTIVITIES OF DERIVED SYNTHETIC PEPTIDES. JRNL REF DEV.COMP.IMMUNOL. V. 32 227 2008 JRNL REFN ISSN 0145-305X JRNL PMID 17628674 JRNL DOI 10.1016/J.DCI.2007.05.006 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.1, X-PLOR 3.8 REMARK 3 AUTHORS : NA (XWINNMR), RICE, L.M., BRUGER, A.T. (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EEM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026569. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 3.3 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM MYTILIN; 95% H2O, 5% D2O, REMARK 210 PH 3.3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY; 2D TOCSY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : GIFA 4.0, X-PLOR 3.8 REMARK 210 METHOD USED : DISTANCE GEOMETRY/ENERGY REMARK 210 MINIMIZATION (XPLOR) REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 60 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH FAVORABLE NON REMARK 210 -BOND ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 5 0.31 SIDE CHAIN REMARK 500 1 ARG A 11 0.29 SIDE CHAIN REMARK 500 1 ARG A 13 0.32 SIDE CHAIN REMARK 500 1 ARG A 14 0.30 SIDE CHAIN REMARK 500 1 ARG A 24 0.31 SIDE CHAIN REMARK 500 1 ARG A 26 0.31 SIDE CHAIN REMARK 500 1 ARG A 33 0.31 SIDE CHAIN REMARK 500 2 ARG A 5 0.31 SIDE CHAIN REMARK 500 2 ARG A 11 0.32 SIDE CHAIN REMARK 500 2 ARG A 13 0.31 SIDE CHAIN REMARK 500 2 ARG A 14 0.32 SIDE CHAIN REMARK 500 2 ARG A 24 0.31 SIDE CHAIN REMARK 500 2 ARG A 26 0.24 SIDE CHAIN REMARK 500 2 ARG A 33 0.32 SIDE CHAIN REMARK 500 3 ARG A 5 0.29 SIDE CHAIN REMARK 500 3 ARG A 11 0.32 SIDE CHAIN REMARK 500 3 ARG A 13 0.30 SIDE CHAIN REMARK 500 3 ARG A 14 0.31 SIDE CHAIN REMARK 500 3 ARG A 24 0.30 SIDE CHAIN REMARK 500 3 ARG A 26 0.31 SIDE CHAIN REMARK 500 3 ARG A 33 0.32 SIDE CHAIN REMARK 500 4 ARG A 5 0.32 SIDE CHAIN REMARK 500 4 ARG A 11 0.32 SIDE CHAIN REMARK 500 4 ARG A 13 0.27 SIDE CHAIN REMARK 500 4 ARG A 14 0.31 SIDE CHAIN REMARK 500 4 ARG A 24 0.30 SIDE CHAIN REMARK 500 4 ARG A 26 0.32 SIDE CHAIN REMARK 500 4 ARG A 33 0.29 SIDE CHAIN REMARK 500 5 ARG A 5 0.31 SIDE CHAIN REMARK 500 5 ARG A 11 0.32 SIDE CHAIN REMARK 500 5 ARG A 13 0.31 SIDE CHAIN REMARK 500 5 ARG A 14 0.31 SIDE CHAIN REMARK 500 5 ARG A 24 0.31 SIDE CHAIN REMARK 500 5 ARG A 26 0.32 SIDE CHAIN REMARK 500 5 ARG A 33 0.31 SIDE CHAIN REMARK 500 6 ARG A 5 0.29 SIDE CHAIN REMARK 500 6 ARG A 11 0.30 SIDE CHAIN REMARK 500 6 ARG A 13 0.32 SIDE CHAIN REMARK 500 6 ARG A 14 0.32 SIDE CHAIN REMARK 500 6 ARG A 24 0.32 SIDE CHAIN REMARK 500 6 ARG A 26 0.31 SIDE CHAIN REMARK 500 6 ARG A 33 0.31 SIDE CHAIN REMARK 500 7 ARG A 5 0.30 SIDE CHAIN REMARK 500 7 ARG A 11 0.31 SIDE CHAIN REMARK 500 7 ARG A 13 0.32 SIDE CHAIN REMARK 500 7 ARG A 14 0.31 SIDE CHAIN REMARK 500 7 ARG A 24 0.30 SIDE CHAIN REMARK 500 7 ARG A 26 0.31 SIDE CHAIN REMARK 500 7 ARG A 33 0.30 SIDE CHAIN REMARK 500 8 ARG A 5 0.31 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 140 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2EEM A 1 34 UNP P81613 MYTB_MYTED 1 34 SEQRES 1 A 34 SER CYS ALA SER ARG CYS LYS GLY HIS CYS ARG ALA ARG SEQRES 2 A 34 ARG CYS GLY TYR TYR VAL SER VAL LEU TYR ARG GLY ARG SEQRES 3 A 34 CYS TYR CYS LYS CYS LEU ARG CYS HELIX 1 1 SER A 1 ARG A 13 1 13 SHEET 1 A 2 TYR A 17 TYR A 23 0 SHEET 2 A 2 ARG A 26 LEU A 32 -1 O LEU A 32 N TYR A 17 SSBOND 1 CYS A 2 CYS A 27 1555 1555 2.02 SSBOND 2 CYS A 6 CYS A 29 1555 1555 2.02 SSBOND 3 CYS A 10 CYS A 31 1555 1555 2.02 SSBOND 4 CYS A 15 CYS A 34 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1