data_2EL8 # _entry.id 2EL8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EL8 pdb_00002el8 10.2210/pdb2el8/pdb RCSB RCSB026802 ? ? WWPDB D_1000026802 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001002297.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EL8 _pdbx_database_status.recvd_initial_deposition_date 2007-03-26 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kasai, T.' 1 'Miyamoto, K.' 2 'Tochio, N.' 3 'Tomizawa, T.' 4 'Koshiba, S.' 5 'Watanabe, S.' 6 'Harada, T.' 7 'Kigawa, T.' 8 'Yokoyama, S.' 9 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 10 # _citation.id primary _citation.title 'Solution structure of the human STAP2 SH2 domain' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kasai, T.' 1 ? primary 'Miyamoto, K.' 2 ? primary 'Tochio, N.' 3 ? primary 'Tomizawa, T.' 4 ? primary 'Koshiba, S.' 5 ? primary 'Watanabe, S.' 6 ? primary 'Harada, T.' 7 ? primary 'Kigawa, T.' 8 ? primary 'Yokoyama, S.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Signal-transducing adaptor protein 2' _entity.formula_weight 13022.834 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH2 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'STAP-2, Breast tumor kinase substrate, BRK substrate' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKRE GPKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLLD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKRE GPKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLLD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001002297.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLU n 1 9 VAL n 1 10 LEU n 1 11 ALA n 1 12 LYS n 1 13 GLU n 1 14 GLU n 1 15 ALA n 1 16 ARG n 1 17 ARG n 1 18 ALA n 1 19 LEU n 1 20 GLU n 1 21 THR n 1 22 PRO n 1 23 SER n 1 24 CYS n 1 25 PHE n 1 26 LEU n 1 27 LYS n 1 28 VAL n 1 29 SER n 1 30 ARG n 1 31 LEU n 1 32 GLU n 1 33 ALA n 1 34 GLN n 1 35 LEU n 1 36 LEU n 1 37 LEU n 1 38 GLU n 1 39 ARG n 1 40 TYR n 1 41 PRO n 1 42 GLU n 1 43 CYS n 1 44 GLY n 1 45 ASN n 1 46 LEU n 1 47 LEU n 1 48 LEU n 1 49 ARG n 1 50 PRO n 1 51 SER n 1 52 GLY n 1 53 ASP n 1 54 GLY n 1 55 ALA n 1 56 ASP n 1 57 GLY n 1 58 VAL n 1 59 SER n 1 60 VAL n 1 61 THR n 1 62 THR n 1 63 ARG n 1 64 GLN n 1 65 MET n 1 66 HIS n 1 67 ASN n 1 68 GLY n 1 69 THR n 1 70 HIS n 1 71 VAL n 1 72 VAL n 1 73 ARG n 1 74 HIS n 1 75 TYR n 1 76 LYS n 1 77 VAL n 1 78 LYS n 1 79 ARG n 1 80 GLU n 1 81 GLY n 1 82 PRO n 1 83 LYS n 1 84 TYR n 1 85 VAL n 1 86 ILE n 1 87 ASP n 1 88 VAL n 1 89 GLU n 1 90 GLN n 1 91 PRO n 1 92 PHE n 1 93 SER n 1 94 CYS n 1 95 THR n 1 96 SER n 1 97 LEU n 1 98 ASP n 1 99 ALA n 1 100 VAL n 1 101 VAL n 1 102 ASN n 1 103 TYR n 1 104 PHE n 1 105 VAL n 1 106 SER n 1 107 HIS n 1 108 THR n 1 109 LYS n 1 110 LYS n 1 111 ALA n 1 112 LEU n 1 113 VAL n 1 114 PRO n 1 115 PHE n 1 116 LEU n 1 117 LEU n 1 118 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene STAP2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P061218-22 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code STAP2_HUMAN _struct_ref.pdbx_db_accession Q9UGK3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVID VEQPFSCTSLDAVVNYFVSHTKKALVPFLLD ; _struct_ref.pdbx_align_begin 137 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EL8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UGK3 _struct_ref_seq.db_align_beg 137 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EL8 GLY A 1 ? UNP Q9UGK3 ? ? 'expression tag' 1 1 1 2EL8 SER A 2 ? UNP Q9UGK3 ? ? 'expression tag' 2 2 1 2EL8 SER A 3 ? UNP Q9UGK3 ? ? 'expression tag' 3 3 1 2EL8 GLY A 4 ? UNP Q9UGK3 ? ? 'expression tag' 4 4 1 2EL8 SER A 5 ? UNP Q9UGK3 ? ? 'expression tag' 5 5 1 2EL8 SER A 6 ? UNP Q9UGK3 ? ? 'expression tag' 6 6 1 2EL8 GLY A 7 ? UNP Q9UGK3 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.00mM SH2 domain U-15N, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EL8 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EL8 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EL8 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9810 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2EL8 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EL8 _struct.title 'Solution structure of the human STAP2 SH2 domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EL8 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;SH2 domain, Phosphotyrosine binding domain, Protein Tyrosine Kinase, Signal Transduction, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 29 ? TYR A 40 ? SER A 29 TYR A 40 1 ? 12 HELX_P HELX_P2 2 SER A 96 ? THR A 108 ? SER A 96 THR A 108 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 47 ? PRO A 50 ? LEU A 47 PRO A 50 A 2 VAL A 58 ? THR A 62 ? VAL A 58 THR A 62 A 3 ARG A 73 ? TYR A 75 ? ARG A 73 TYR A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 47 ? N LEU A 47 O THR A 61 ? O THR A 61 A 2 3 N THR A 62 ? N THR A 62 O ARG A 73 ? O ARG A 73 # _database_PDB_matrix.entry_id 2EL8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EL8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 HIS 74 74 74 HIS HIS A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 ASP 118 118 118 ASP ASP A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 8 ? ? -53.34 174.46 2 1 VAL A 9 ? ? -37.20 -30.05 3 1 LEU A 10 ? ? 33.16 46.13 4 1 ARG A 17 ? ? 34.85 45.56 5 1 LEU A 31 ? ? -37.22 -36.53 6 1 ALA A 33 ? ? -39.42 -27.01 7 1 CYS A 43 ? ? -86.10 38.25 8 1 SER A 51 ? ? -63.86 -179.61 9 1 ASN A 67 ? ? 43.08 26.32 10 1 PRO A 82 ? ? -69.70 3.37 11 1 PRO A 91 ? ? -69.75 82.30 12 1 ALA A 111 ? ? -69.55 96.27 13 2 LEU A 10 ? ? -68.91 94.33 14 2 LYS A 12 ? ? 34.15 33.70 15 2 ALA A 33 ? ? -37.54 -37.73 16 2 TYR A 40 ? ? -117.61 79.79 17 2 ASN A 67 ? ? 41.79 29.92 18 2 ASP A 87 ? ? -90.16 41.29 19 2 PRO A 91 ? ? -69.76 85.05 20 2 PHE A 92 ? ? -60.64 98.55 21 2 ALA A 111 ? ? -51.33 100.64 22 3 ARG A 17 ? ? -102.51 50.09 23 3 ASP A 53 ? ? -102.54 -64.88 24 3 ASP A 56 ? ? -54.25 94.12 25 3 PRO A 82 ? ? -69.81 0.93 26 3 ILE A 86 ? ? -42.27 152.36 27 3 PRO A 91 ? ? -69.79 88.96 28 4 ALA A 18 ? ? -114.38 73.86 29 4 SER A 29 ? ? -68.47 -179.92 30 4 MET A 65 ? ? -41.98 100.32 31 4 ASP A 87 ? ? -87.34 42.91 32 4 PRO A 91 ? ? -69.67 88.33 33 4 LYS A 109 ? ? -49.95 -70.28 34 5 LEU A 10 ? ? -54.15 99.89 35 5 LYS A 12 ? ? -82.04 38.94 36 5 ASN A 45 ? ? -131.50 -40.68 37 5 ASP A 87 ? ? -91.14 45.60 38 5 PRO A 91 ? ? -69.74 93.02 39 5 HIS A 107 ? ? -41.59 -70.09 40 6 LYS A 12 ? ? 32.04 36.53 41 6 PHE A 25 ? ? -44.50 156.12 42 6 TYR A 40 ? ? -119.62 78.98 43 6 SER A 51 ? ? -51.57 179.42 44 6 PRO A 82 ? ? -69.81 3.07 45 6 ASP A 87 ? ? -82.81 46.42 46 6 PRO A 91 ? ? -69.76 86.80 47 7 LEU A 10 ? ? -50.48 94.36 48 7 ALA A 11 ? ? -36.31 153.79 49 7 LYS A 12 ? ? -39.00 116.36 50 7 ARG A 17 ? ? -89.51 43.24 51 7 SER A 51 ? ? -95.91 38.45 52 7 ASP A 56 ? ? 34.45 43.38 53 7 ILE A 86 ? ? -47.92 156.08 54 7 ASP A 87 ? ? -91.69 46.38 55 7 PRO A 91 ? ? -69.81 86.38 56 7 ALA A 111 ? ? -43.35 99.75 57 8 ALA A 11 ? ? -46.71 174.76 58 8 LYS A 12 ? ? -53.59 103.27 59 8 ARG A 17 ? ? 34.24 39.63 60 8 ASP A 53 ? ? -124.80 -58.34 61 8 ASN A 67 ? ? 71.30 36.71 62 8 PRO A 82 ? ? -69.84 2.96 63 8 PRO A 91 ? ? -69.81 90.41 64 8 ALA A 111 ? ? -59.83 109.00 65 9 LYS A 12 ? ? 33.37 33.31 66 9 ALA A 18 ? ? 70.05 36.61 67 9 ASN A 45 ? ? -130.88 -32.00 68 9 PRO A 82 ? ? -69.82 2.86 69 9 PRO A 91 ? ? -69.73 89.01 70 10 LYS A 12 ? ? 37.33 41.47 71 10 ALA A 18 ? ? -108.69 65.52 72 10 TYR A 40 ? ? -108.71 78.77 73 10 ASP A 53 ? ? -96.80 42.23 74 10 MET A 65 ? ? -69.19 97.99 75 10 PRO A 82 ? ? -69.70 2.71 76 10 ASP A 87 ? ? -68.09 74.32 77 10 PRO A 91 ? ? -69.74 89.18 78 10 THR A 108 ? ? -58.66 -177.07 79 10 LYS A 109 ? ? -40.78 151.53 80 10 LYS A 110 ? ? -33.05 -34.91 81 11 GLU A 8 ? ? -49.96 -179.16 82 11 VAL A 9 ? ? -34.22 113.38 83 11 ARG A 17 ? ? -76.63 48.18 84 11 ALA A 18 ? ? -93.02 58.77 85 11 PHE A 25 ? ? -43.76 154.56 86 11 ASP A 56 ? ? -98.58 41.42 87 11 PRO A 91 ? ? -69.81 86.39 88 11 LYS A 110 ? ? -41.92 163.69 89 12 VAL A 9 ? ? -35.13 -34.17 90 12 LEU A 10 ? ? 33.50 50.94 91 12 ARG A 17 ? ? -50.95 171.90 92 12 ALA A 33 ? ? -36.50 -35.69 93 12 PRO A 91 ? ? -69.74 88.19 94 13 ALA A 11 ? ? -55.14 -175.31 95 13 ARG A 17 ? ? -77.62 47.60 96 13 LEU A 19 ? ? -109.52 -63.18 97 13 GLU A 20 ? ? -38.72 -37.60 98 13 GLU A 32 ? ? -36.75 -39.77 99 13 CYS A 43 ? ? -85.59 37.93 100 13 ASN A 45 ? ? -132.92 -52.62 101 13 LEU A 46 ? ? -50.07 89.46 102 13 PRO A 91 ? ? -69.71 85.50 103 13 THR A 108 ? ? -54.54 -174.98 104 14 ALA A 15 ? ? 38.30 26.31 105 14 PHE A 25 ? ? -49.38 152.10 106 14 ALA A 33 ? ? -34.06 -38.53 107 14 TYR A 40 ? ? -119.13 76.59 108 14 ASN A 67 ? ? 39.30 41.28 109 14 PRO A 91 ? ? -69.67 85.01 110 15 GLU A 8 ? ? -48.31 -18.99 111 15 VAL A 9 ? ? -173.64 143.34 112 15 ARG A 17 ? ? -91.22 59.55 113 15 PHE A 25 ? ? -45.98 153.16 114 15 TYR A 40 ? ? -114.08 76.52 115 15 HIS A 66 ? ? -69.81 -178.88 116 15 ASN A 67 ? ? -33.66 -39.24 117 15 PRO A 82 ? ? -69.75 3.02 118 15 PRO A 91 ? ? -69.68 86.36 119 16 LEU A 10 ? ? -87.74 44.74 120 16 ALA A 33 ? ? -33.84 -38.21 121 16 TYR A 40 ? ? -116.30 78.14 122 16 CYS A 43 ? ? -84.34 35.69 123 16 LEU A 46 ? ? -64.19 98.36 124 16 ASN A 67 ? ? -33.32 93.00 125 16 PRO A 91 ? ? -69.78 86.57 126 16 VAL A 105 ? ? -35.86 -33.35 127 16 THR A 108 ? ? -34.27 131.20 128 16 LEU A 112 ? ? -162.35 110.17 129 17 ARG A 17 ? ? 34.11 53.21 130 17 ALA A 33 ? ? -34.06 -33.26 131 17 ASN A 45 ? ? -132.32 -32.54 132 17 PRO A 82 ? ? -69.89 2.02 133 17 PRO A 91 ? ? -69.80 91.94 134 17 THR A 108 ? ? -36.84 155.82 135 17 LYS A 109 ? ? -33.29 -75.13 136 18 SER A 2 ? ? -170.59 136.13 137 18 SER A 5 ? ? -173.47 114.49 138 18 ALA A 11 ? ? -37.06 -72.75 139 18 LYS A 12 ? ? -163.49 105.04 140 18 ARG A 17 ? ? -55.57 96.50 141 18 TYR A 40 ? ? -119.54 71.45 142 18 ASP A 53 ? ? -125.16 -54.11 143 18 ASN A 67 ? ? 45.34 28.89 144 18 PRO A 82 ? ? -69.81 2.50 145 18 ASP A 87 ? ? -89.52 43.87 146 18 PRO A 91 ? ? -69.69 81.02 147 18 ALA A 111 ? ? -34.59 113.19 148 19 PHE A 25 ? ? -45.48 152.50 149 19 ALA A 33 ? ? -34.59 -37.49 150 19 ASP A 87 ? ? -93.29 52.53 151 19 PRO A 91 ? ? -69.69 85.96 152 20 SER A 6 ? ? -101.01 40.36 153 20 ALA A 15 ? ? -170.95 141.10 154 20 ARG A 17 ? ? -86.52 41.73 155 20 PHE A 25 ? ? -46.96 150.07 156 20 GLN A 34 ? ? -59.51 -70.26 157 20 CYS A 43 ? ? -87.30 35.53 158 20 ASN A 45 ? ? -130.04 -44.06 159 20 LEU A 46 ? ? -58.04 89.60 160 20 ASP A 53 ? ? -90.07 48.40 161 20 ASP A 87 ? ? -94.79 45.85 162 20 PRO A 91 ? ? -69.68 87.05 163 20 ALA A 111 ? ? -54.55 104.07 #