data_2EVD # _entry.id 2EVD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EVD pdb_00002evd 10.2210/pdb2evd/pdb RCSB RCSB035137 ? ? WWPDB D_1000035137 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2EUM _pdbx_database_related.details 'The same protein complexed with 8:0 Lactosylceramide' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2EVD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-10-31 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malinina, L.' 1 'Malakhova, M.L.' 2 'Kanack, A.T.' 3 'Abagyan, R.' 4 'Brown, R.E.' 5 'Patel, D.J.' 6 # _citation.id primary _citation.title 'The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.' _citation.journal_abbrev 'Plos Biol.' _citation.journal_volume 4 _citation.page_first e362 _citation.page_last e362 _citation.year 2006 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1544-9173 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17105344 _citation.pdbx_database_id_DOI 10.1371/journal.pbio.0040362 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Malinina, L.' 1 ? primary 'Malakhova, M.L.' 2 ? primary 'Kanack, A.T.' 3 ? primary 'Lu, M.' 4 ? primary 'Abagyan, R.' 5 ? primary 'Brown, R.E.' 6 ? primary 'Patel, D.J.' 7 ? # _cell.entry_id 2EVD _cell.length_a 75.592 _cell.length_b 49.360 _cell.length_c 68.632 _cell.angle_alpha 90.00 _cell.angle_beta 122.38 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2EVD _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glycolipid transfer protein' 23877.777 1 ? ? ? ? 2 branched man 'beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 342.297 1 ? ? ? ? 3 non-polymer syn SPHINGOSINE 299.492 1 ? ? ? ? 4 non-polymer syn 'LAURIC ACID' 200.318 1 ? ? ? ? 5 non-polymer syn N-OCTANE 114.229 1 ? ? ? ? 6 non-polymer syn DECANE 142.282 1 ? ? ? ? 7 water nat water 18.015 170 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 GLTP 2 beta-lactose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEM YGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSD FLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMNAELNYKV ; _entity_poly.pdbx_seq_one_letter_code_can ;MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEM YGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSD FLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMNAELNYKV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LEU n 1 4 LEU n 1 5 ALA n 1 6 GLU n 1 7 HIS n 1 8 LEU n 1 9 LEU n 1 10 LYS n 1 11 PRO n 1 12 LEU n 1 13 PRO n 1 14 ALA n 1 15 ASP n 1 16 LYS n 1 17 GLN n 1 18 ILE n 1 19 GLU n 1 20 THR n 1 21 GLY n 1 22 PRO n 1 23 PHE n 1 24 LEU n 1 25 GLU n 1 26 ALA n 1 27 VAL n 1 28 SER n 1 29 HIS n 1 30 LEU n 1 31 PRO n 1 32 PRO n 1 33 PHE n 1 34 PHE n 1 35 ASP n 1 36 CYS n 1 37 LEU n 1 38 GLY n 1 39 SER n 1 40 PRO n 1 41 VAL n 1 42 PHE n 1 43 THR n 1 44 PRO n 1 45 ILE n 1 46 LYS n 1 47 ALA n 1 48 ASP n 1 49 ILE n 1 50 SER n 1 51 GLY n 1 52 ASN n 1 53 ILE n 1 54 THR n 1 55 LYS n 1 56 ILE n 1 57 LYS n 1 58 ALA n 1 59 VAL n 1 60 TYR n 1 61 ASP n 1 62 THR n 1 63 ASN n 1 64 PRO n 1 65 ALA n 1 66 LYS n 1 67 PHE n 1 68 ARG n 1 69 THR n 1 70 LEU n 1 71 GLN n 1 72 ASN n 1 73 ILE n 1 74 LEU n 1 75 GLU n 1 76 VAL n 1 77 GLU n 1 78 LYS n 1 79 GLU n 1 80 MET n 1 81 TYR n 1 82 GLY n 1 83 ALA n 1 84 GLU n 1 85 TRP n 1 86 PRO n 1 87 LYS n 1 88 VAL n 1 89 GLY n 1 90 ALA n 1 91 THR n 1 92 LEU n 1 93 ALA n 1 94 LEU n 1 95 MET n 1 96 TRP n 1 97 LEU n 1 98 LYS n 1 99 ARG n 1 100 GLY n 1 101 LEU n 1 102 ARG n 1 103 PHE n 1 104 ILE n 1 105 GLN n 1 106 VAL n 1 107 PHE n 1 108 LEU n 1 109 GLN n 1 110 SER n 1 111 ILE n 1 112 CYS n 1 113 ASP n 1 114 GLY n 1 115 GLU n 1 116 ARG n 1 117 ASP n 1 118 GLU n 1 119 ASN n 1 120 HIS n 1 121 PRO n 1 122 ASN n 1 123 LEU n 1 124 ILE n 1 125 ARG n 1 126 VAL n 1 127 ASN n 1 128 ALA n 1 129 THR n 1 130 LYS n 1 131 ALA n 1 132 TYR n 1 133 GLU n 1 134 MET n 1 135 ALA n 1 136 LEU n 1 137 LYS n 1 138 LYS n 1 139 TYR n 1 140 HIS n 1 141 GLY n 1 142 TRP n 1 143 ILE n 1 144 VAL n 1 145 GLN n 1 146 LYS n 1 147 ILE n 1 148 PHE n 1 149 GLN n 1 150 ALA n 1 151 ALA n 1 152 LEU n 1 153 TYR n 1 154 ALA n 1 155 ALA n 1 156 PRO n 1 157 TYR n 1 158 LYS n 1 159 SER n 1 160 ASP n 1 161 PHE n 1 162 LEU n 1 163 LYS n 1 164 ALA n 1 165 LEU n 1 166 SER n 1 167 LYS n 1 168 GLY n 1 169 GLN n 1 170 ASN n 1 171 VAL n 1 172 THR n 1 173 GLU n 1 174 GLU n 1 175 GLU n 1 176 CYS n 1 177 LEU n 1 178 GLU n 1 179 LYS n 1 180 ILE n 1 181 ARG n 1 182 LEU n 1 183 PHE n 1 184 LEU n 1 185 VAL n 1 186 ASN n 1 187 TYR n 1 188 THR n 1 189 ALA n 1 190 THR n 1 191 ILE n 1 192 ASP n 1 193 VAL n 1 194 ILE n 1 195 TYR n 1 196 GLU n 1 197 MET n 1 198 TYR n 1 199 THR n 1 200 GLN n 1 201 MET n 1 202 ASN n 1 203 ALA n 1 204 GLU n 1 205 LEU n 1 206 ASN n 1 207 TYR n 1 208 LYS n 1 209 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET30 XA-LIC' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GLTP_HUMAN _struct_ref.pdbx_db_accession Q9NZD2 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EVD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 209 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NZD2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 208 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 209 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D10 non-polymer . DECANE ? 'C10 H22' 142.282 DAO non-polymer . 'LAURIC ACID' ? 'C12 H24 O2' 200.318 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OCT non-polymer . N-OCTANE ? 'C8 H18' 114.229 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SPH non-polymer . SPHINGOSINE ? 'C18 H37 N O2' 299.492 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2EVD _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '15-20% PEG 3350 or 8000, 50 mM potassium phosphate, pH 4.5, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-12-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2EVD _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.00 _reflns.number_obs 14549 _reflns.percent_possible_obs 100.000 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_chi_squared 1.063 _reflns.pdbx_redundancy 7.200 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.number_all 14549 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_low 2.07 _reflns_shell.d_res_high 2.00 _reflns_shell.number_unique_all 1446 _reflns_shell.percent_possible_all 100.000 _reflns_shell.Rmerge_I_obs 0.602 _reflns_shell.pdbx_chi_squared 1.006 _reflns_shell.pdbx_redundancy 6.800 _reflns_shell.number_unique_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.840 _refine.ls_number_reflns_obs 14549 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.181 _refine.ls_R_factor_R_work 0.178 _refine.ls_R_factor_R_free 0.234 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 730 _refine.B_iso_mean 38.205 _refine.aniso_B[1][1] -2.250 _refine.aniso_B[2][2] 1.120 _refine.aniso_B[3][3] 0.420 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.660 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.pdbx_overall_ESU_R 0.199 _refine.pdbx_overall_ESU_R_Free 0.176 _refine.overall_SU_ML 0.129 _refine.overall_SU_B 4.661 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.entry_id 2EVD _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 14549 _refine.ls_R_factor_obs 0.181 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 2EUM' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1643 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 71 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 1884 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1758 0.014 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2365 1.612 2.006 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 202 5.605 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 75 32.972 24.800 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 302 15.085 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 16.699 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 268 0.117 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1258 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 884 0.208 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1219 0.316 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 135 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 33 0.158 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 14 0.173 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1060 1.194 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1657 1.866 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 803 2.747 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 708 4.142 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.950 _refine_ls_shell.number_reflns_R_work 998 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.239 _refine_ls_shell.R_factor_R_free 0.355 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1051 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2EVD _struct.title 'Crystal structure of human Glycolipid Transfer Protein complexed with 12:0 Lactosylceramide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EVD _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' _struct_keywords.text 'protein-glycolipid complex, LIPID TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 19 ? SER A 28 ? GLU A 19 SER A 28 1 ? 10 HELX_P HELX_P2 2 HIS A 29 ? LEU A 37 ? HIS A 29 LEU A 37 5 ? 9 HELX_P HELX_P3 3 SER A 39 ? VAL A 41 ? SER A 39 VAL A 41 5 ? 3 HELX_P HELX_P4 4 PHE A 42 ? ASN A 63 ? PHE A 42 ASN A 63 1 ? 22 HELX_P HELX_P5 5 THR A 69 ? GLY A 82 ? THR A 69 GLY A 82 1 ? 14 HELX_P HELX_P6 6 ALA A 83 ? TRP A 85 ? ALA A 83 TRP A 85 5 ? 3 HELX_P HELX_P7 7 VAL A 88 ? ASP A 113 ? VAL A 88 ASP A 113 1 ? 26 HELX_P HELX_P8 8 ILE A 124 ? LEU A 136 ? ILE A 124 LEU A 136 1 ? 13 HELX_P HELX_P9 9 LYS A 137 ? HIS A 140 ? LYS A 137 HIS A 140 5 ? 4 HELX_P HELX_P10 10 GLY A 141 ? LEU A 152 ? GLY A 141 LEU A 152 1 ? 12 HELX_P HELX_P11 11 TYR A 153 ? ALA A 155 ? TYR A 153 ALA A 155 5 ? 3 HELX_P HELX_P12 12 TYR A 157 ? LEU A 165 ? TYR A 157 LEU A 165 1 ? 9 HELX_P HELX_P13 13 THR A 172 ? MET A 201 ? THR A 172 MET A 201 1 ? 30 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? C SPH . N2 ? ? ? 1_555 D DAO . C1 ? ? A SPH 301 A DAO 302 1_555 ? ? ? ? ? ? ? 1.260 ? ? covale2 covale one ? C SPH . C1 ? ? ? 1_555 B BGC . O1 ? ? A SPH 301 B BGC 1 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale3 covale both ? B BGC . O4 ? ? ? 1_555 B GAL . C1 ? ? B BGC 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.415 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 85 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 85 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 86 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 86 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.49 # _atom_sites.entry_id 2EVD _atom_sites.fract_transf_matrix[1][1] 0.013229 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008389 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020259 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017253 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'BGC B 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'SPH A 301 HAS WRONG CHIRALITY AT ATOM C2' 3 'SPH A 301 HAS WRONG CHIRALITY AT ATOM C3' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 HIS 29 29 29 HIS HIS A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 MET 80 80 80 MET MET A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 TRP 85 85 85 TRP TRP A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 PRO 121 121 121 PRO PRO A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 MET 134 134 134 MET MET A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 TRP 142 142 142 TRP TRP A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 PHE 148 148 148 PHE PHE A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 LYS 167 167 ? ? ? A . n A 1 168 GLY 168 168 ? ? ? A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 CYS 176 176 176 CYS CYS A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 PHE 183 183 183 PHE PHE A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 ASN 186 186 186 ASN ASN A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 TYR 195 195 195 TYR TYR A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 MET 197 197 197 MET MET A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 THR 199 199 199 THR THR A . n A 1 200 GLN 200 200 200 GLN GLN A . n A 1 201 MET 201 201 201 MET MET A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 TYR 207 207 207 TYR TYR A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 VAL 209 209 209 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SPH 1 301 301 SPH SPH A . D 4 DAO 1 302 302 DAO LAU A . E 5 OCT 1 303 303 OCT OCT A . F 6 D10 1 304 304 D10 D10 A . G 7 HOH 1 305 1 HOH HOH A . G 7 HOH 2 306 2 HOH HOH A . G 7 HOH 3 307 3 HOH HOH A . G 7 HOH 4 308 4 HOH HOH A . G 7 HOH 5 309 5 HOH HOH A . G 7 HOH 6 310 6 HOH HOH A . G 7 HOH 7 311 7 HOH HOH A . G 7 HOH 8 312 8 HOH HOH A . G 7 HOH 9 313 9 HOH HOH A . G 7 HOH 10 314 10 HOH HOH A . G 7 HOH 11 315 11 HOH HOH A . G 7 HOH 12 316 12 HOH HOH A . G 7 HOH 13 317 13 HOH HOH A . G 7 HOH 14 318 14 HOH HOH A . G 7 HOH 15 319 15 HOH HOH A . G 7 HOH 16 320 16 HOH HOH A . G 7 HOH 17 321 17 HOH HOH A . G 7 HOH 18 322 18 HOH HOH A . G 7 HOH 19 323 19 HOH HOH A . G 7 HOH 20 324 20 HOH HOH A . G 7 HOH 21 325 21 HOH HOH A . G 7 HOH 22 326 22 HOH HOH A . G 7 HOH 23 327 23 HOH HOH A . G 7 HOH 24 328 24 HOH HOH A . G 7 HOH 25 329 25 HOH HOH A . G 7 HOH 26 330 26 HOH HOH A . G 7 HOH 27 331 27 HOH HOH A . G 7 HOH 28 332 28 HOH HOH A . G 7 HOH 29 333 29 HOH HOH A . G 7 HOH 30 334 30 HOH HOH A . G 7 HOH 31 335 31 HOH HOH A . G 7 HOH 32 336 32 HOH HOH A . G 7 HOH 33 337 33 HOH HOH A . G 7 HOH 34 338 34 HOH HOH A . G 7 HOH 35 339 35 HOH HOH A . G 7 HOH 36 340 36 HOH HOH A . G 7 HOH 37 341 37 HOH HOH A . G 7 HOH 38 342 38 HOH HOH A . G 7 HOH 39 343 39 HOH HOH A . G 7 HOH 40 344 40 HOH HOH A . G 7 HOH 41 345 41 HOH HOH A . G 7 HOH 42 346 42 HOH HOH A . G 7 HOH 43 347 44 HOH HOH A . G 7 HOH 44 348 45 HOH HOH A . G 7 HOH 45 349 46 HOH HOH A . G 7 HOH 46 350 47 HOH HOH A . G 7 HOH 47 351 48 HOH HOH A . G 7 HOH 48 352 49 HOH HOH A . G 7 HOH 49 353 50 HOH HOH A . G 7 HOH 50 354 51 HOH HOH A . G 7 HOH 51 355 52 HOH HOH A . G 7 HOH 52 356 53 HOH HOH A . G 7 HOH 53 357 54 HOH HOH A . G 7 HOH 54 358 55 HOH HOH A . G 7 HOH 55 359 56 HOH HOH A . G 7 HOH 56 360 57 HOH HOH A . G 7 HOH 57 361 59 HOH HOH A . G 7 HOH 58 362 62 HOH HOH A . G 7 HOH 59 363 63 HOH HOH A . G 7 HOH 60 364 64 HOH HOH A . G 7 HOH 61 365 65 HOH HOH A . G 7 HOH 62 366 66 HOH HOH A . G 7 HOH 63 367 67 HOH HOH A . G 7 HOH 64 368 68 HOH HOH A . G 7 HOH 65 369 69 HOH HOH A . G 7 HOH 66 370 70 HOH HOH A . G 7 HOH 67 371 72 HOH HOH A . G 7 HOH 68 372 73 HOH HOH A . G 7 HOH 69 373 74 HOH HOH A . G 7 HOH 70 374 76 HOH HOH A . G 7 HOH 71 375 77 HOH HOH A . G 7 HOH 72 376 78 HOH HOH A . G 7 HOH 73 377 79 HOH HOH A . G 7 HOH 74 378 80 HOH HOH A . G 7 HOH 75 379 81 HOH HOH A . G 7 HOH 76 380 82 HOH HOH A . G 7 HOH 77 381 83 HOH HOH A . G 7 HOH 78 382 84 HOH HOH A . G 7 HOH 79 383 85 HOH HOH A . G 7 HOH 80 384 86 HOH HOH A . G 7 HOH 81 385 87 HOH HOH A . G 7 HOH 82 386 88 HOH HOH A . G 7 HOH 83 387 91 HOH HOH A . G 7 HOH 84 388 92 HOH HOH A . G 7 HOH 85 389 93 HOH HOH A . G 7 HOH 86 390 94 HOH HOH A . G 7 HOH 87 391 96 HOH HOH A . G 7 HOH 88 392 101 HOH HOH A . G 7 HOH 89 393 102 HOH HOH A . G 7 HOH 90 394 103 HOH HOH A . G 7 HOH 91 395 105 HOH HOH A . G 7 HOH 92 396 106 HOH HOH A . G 7 HOH 93 397 107 HOH HOH A . G 7 HOH 94 398 108 HOH HOH A . G 7 HOH 95 399 109 HOH HOH A . G 7 HOH 96 400 111 HOH HOH A . G 7 HOH 97 401 112 HOH HOH A . G 7 HOH 98 402 113 HOH HOH A . G 7 HOH 99 403 116 HOH HOH A . G 7 HOH 100 404 118 HOH HOH A . G 7 HOH 101 405 122 HOH HOH A . G 7 HOH 102 406 124 HOH HOH A . G 7 HOH 103 407 125 HOH HOH A . G 7 HOH 104 408 129 HOH HOH A . G 7 HOH 105 409 131 HOH HOH A . G 7 HOH 106 410 132 HOH HOH A . G 7 HOH 107 411 134 HOH HOH A . G 7 HOH 108 412 136 HOH HOH A . G 7 HOH 109 413 137 HOH HOH A . G 7 HOH 110 414 140 HOH HOH A . G 7 HOH 111 415 144 HOH HOH A . G 7 HOH 112 416 148 HOH HOH A . G 7 HOH 113 417 149 HOH HOH A . G 7 HOH 114 418 151 HOH HOH A . G 7 HOH 115 419 153 HOH HOH A . G 7 HOH 116 420 154 HOH HOH A . G 7 HOH 117 421 155 HOH HOH A . G 7 HOH 118 422 157 HOH HOH A . G 7 HOH 119 423 159 HOH HOH A . G 7 HOH 120 424 166 HOH HOH A . G 7 HOH 121 425 167 HOH HOH A . G 7 HOH 122 426 168 HOH HOH A . G 7 HOH 123 427 169 HOH HOH A . G 7 HOH 124 428 170 HOH HOH A . G 7 HOH 125 429 172 HOH HOH A . G 7 HOH 126 430 173 HOH HOH A . G 7 HOH 127 431 174 HOH HOH A . G 7 HOH 128 432 175 HOH HOH A . G 7 HOH 129 433 176 HOH HOH A . G 7 HOH 130 434 177 HOH HOH A . G 7 HOH 131 435 180 HOH HOH A . G 7 HOH 132 436 181 HOH HOH A . G 7 HOH 133 437 183 HOH HOH A . G 7 HOH 134 438 200 HOH HOH A . G 7 HOH 135 439 203 HOH HOH A . G 7 HOH 136 440 204 HOH HOH A . G 7 HOH 137 441 207 HOH HOH A . G 7 HOH 138 442 208 HOH HOH A . G 7 HOH 139 443 211 HOH HOH A . G 7 HOH 140 444 212 HOH HOH A . G 7 HOH 141 445 213 HOH HOH A . G 7 HOH 142 446 216 HOH HOH A . G 7 HOH 143 447 217 HOH HOH A . G 7 HOH 144 448 218 HOH HOH A . G 7 HOH 145 449 219 HOH HOH A . G 7 HOH 146 450 220 HOH HOH A . G 7 HOH 147 451 221 HOH HOH A . G 7 HOH 148 452 222 HOH HOH A . G 7 HOH 149 453 223 HOH HOH A . G 7 HOH 150 454 224 HOH HOH A . G 7 HOH 151 455 225 HOH HOH A . G 7 HOH 152 456 226 HOH HOH A . G 7 HOH 153 457 227 HOH HOH A . G 7 HOH 154 458 229 HOH HOH A . G 7 HOH 155 459 230 HOH HOH A . G 7 HOH 156 460 231 HOH HOH A . G 7 HOH 157 461 232 HOH HOH A . G 7 HOH 158 462 233 HOH HOH A . G 7 HOH 159 463 234 HOH HOH A . G 7 HOH 160 464 235 HOH HOH A . G 7 HOH 161 465 236 HOH HOH A . G 7 HOH 162 466 238 HOH HOH A . G 7 HOH 163 467 239 HOH HOH A . G 7 HOH 164 468 241 HOH HOH A . G 7 HOH 165 469 242 HOH HOH A . G 7 HOH 166 470 243 HOH HOH A . G 7 HOH 167 471 244 HOH HOH A . G 7 HOH 168 472 245 HOH HOH A . G 7 HOH 169 473 246 HOH HOH A . G 7 HOH 170 474 247 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900004 _pdbx_molecule_features.name beta-lactose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900004 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-14 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2018-01-24 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2023-08-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Structure summary' 6 6 'Structure model' Advisory 7 6 'Structure model' 'Atomic model' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Non-polymer description' 11 6 'Structure model' 'Structure summary' 12 7 'Structure model' 'Data collection' 13 7 'Structure model' 'Database references' 14 7 'Structure model' 'Derived calculations' 15 7 'Structure model' 'Refinement description' 16 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' audit_author 3 6 'Structure model' atom_site 4 6 'Structure model' chem_comp 5 6 'Structure model' database_PDB_caveat 6 6 'Structure model' entity 7 6 'Structure model' entity_name_com 8 6 'Structure model' pdbx_branch_scheme 9 6 'Structure model' pdbx_chem_comp_identifier 10 6 'Structure model' pdbx_entity_branch 11 6 'Structure model' pdbx_entity_branch_descriptor 12 6 'Structure model' pdbx_entity_branch_link 13 6 'Structure model' pdbx_entity_branch_list 14 6 'Structure model' pdbx_entity_nonpoly 15 6 'Structure model' pdbx_molecule_features 16 6 'Structure model' pdbx_nonpoly_scheme 17 6 'Structure model' pdbx_validate_chiral 18 6 'Structure model' struct_conn 19 6 'Structure model' struct_site 20 6 'Structure model' struct_site_gen 21 7 'Structure model' chem_comp 22 7 'Structure model' chem_comp_atom 23 7 'Structure model' chem_comp_bond 24 7 'Structure model' database_2 25 7 'Structure model' pdbx_initial_refinement_model 26 7 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_audit_author.name' 11 6 'Structure model' '_atom_site.B_iso_or_equiv' 12 6 'Structure model' '_atom_site.Cartn_x' 13 6 'Structure model' '_atom_site.Cartn_y' 14 6 'Structure model' '_atom_site.Cartn_z' 15 6 'Structure model' '_atom_site.auth_asym_id' 16 6 'Structure model' '_atom_site.auth_atom_id' 17 6 'Structure model' '_atom_site.auth_comp_id' 18 6 'Structure model' '_atom_site.auth_seq_id' 19 6 'Structure model' '_atom_site.label_atom_id' 20 6 'Structure model' '_atom_site.label_comp_id' 21 6 'Structure model' '_chem_comp.formula' 22 6 'Structure model' '_chem_comp.formula_weight' 23 6 'Structure model' '_chem_comp.id' 24 6 'Structure model' '_chem_comp.mon_nstd_flag' 25 6 'Structure model' '_chem_comp.name' 26 6 'Structure model' '_chem_comp.type' 27 6 'Structure model' '_entity.formula_weight' 28 6 'Structure model' '_entity.pdbx_description' 29 6 'Structure model' '_entity.type' 30 6 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 31 6 'Structure model' '_pdbx_validate_chiral.auth_atom_id' 32 6 'Structure model' '_pdbx_validate_chiral.auth_comp_id' 33 6 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 34 7 'Structure model' '_chem_comp.pdbx_synonyms' 35 7 'Structure model' '_database_2.pdbx_DOI' 36 7 'Structure model' '_database_2.pdbx_database_accession' 37 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 3 PDB_EXTRACT 1.701 'OCT. 28, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 CrystalClear '(MSC/RIGAKU)' ? ? ? ? 'data reduction' ? ? ? 5 AMoRE . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 305 ? ? O A HOH 407 ? ? 1.84 2 1 N A LEU 4 ? ? O A HOH 438 ? ? 2.08 3 1 O A HOH 348 ? ? O A HOH 454 ? ? 2.12 4 1 N2 A SPH 301 ? ? O1 A DAO 302 ? ? 2.13 5 1 OE2 A GLU 6 ? ? O A HOH 440 ? ? 2.16 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 63 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -164.83 _pdbx_validate_torsion.psi 82.96 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? B BGC 1 ? 'WRONG HAND' . 2 1 C2 ? A SPH 301 ? 'WRONG HAND' . 3 1 C3 ? A SPH 301 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 169 ? CG ? A GLN 169 CG 2 1 Y 1 A GLN 169 ? CD ? A GLN 169 CD 3 1 Y 1 A GLN 169 ? OE1 ? A GLN 169 OE1 4 1 Y 1 A GLN 169 ? NE2 ? A GLN 169 NE2 5 1 N 1 A OCT 303 ? C7 ? E OCT 1 C7 6 1 N 1 A OCT 303 ? C8 ? E OCT 1 C8 7 1 N 1 A D10 304 ? C10 ? F D10 1 C10 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A LYS 167 ? A LYS 167 5 1 Y 1 A GLY 168 ? A GLY 168 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BGC C2 C N R 74 BGC C3 C N S 75 BGC C4 C N S 76 BGC C5 C N R 77 BGC C6 C N N 78 BGC C1 C N R 79 BGC O1 O N N 80 BGC O2 O N N 81 BGC O3 O N N 82 BGC O4 O N N 83 BGC O5 O N N 84 BGC O6 O N N 85 BGC H2 H N N 86 BGC H3 H N N 87 BGC H4 H N N 88 BGC H5 H N N 89 BGC H61 H N N 90 BGC H62 H N N 91 BGC H1 H N N 92 BGC HO1 H N N 93 BGC HO2 H N N 94 BGC HO3 H N N 95 BGC HO4 H N N 96 BGC HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 D10 C1 C N N 112 D10 C2 C N N 113 D10 C3 C N N 114 D10 C4 C N N 115 D10 C5 C N N 116 D10 C6 C N N 117 D10 C7 C N N 118 D10 C8 C N N 119 D10 C9 C N N 120 D10 C10 C N N 121 D10 H11 H N N 122 D10 H12 H N N 123 D10 H13 H N N 124 D10 H21 H N N 125 D10 H22 H N N 126 D10 H31 H N N 127 D10 H32 H N N 128 D10 H41 H N N 129 D10 H42 H N N 130 D10 H51 H N N 131 D10 H52 H N N 132 D10 H61 H N N 133 D10 H62 H N N 134 D10 H71 H N N 135 D10 H72 H N N 136 D10 H81 H N N 137 D10 H82 H N N 138 D10 H91 H N N 139 D10 H92 H N N 140 D10 H101 H N N 141 D10 H102 H N N 142 D10 H103 H N N 143 DAO O1 O N N 144 DAO O2 O N N 145 DAO C1 C N N 146 DAO C2 C N N 147 DAO C3 C N N 148 DAO C4 C N N 149 DAO C5 C N N 150 DAO C6 C N N 151 DAO C7 C N N 152 DAO C8 C N N 153 DAO C9 C N N 154 DAO C10 C N N 155 DAO C11 C N N 156 DAO C12 C N N 157 DAO HO2 H N N 158 DAO H21 H N N 159 DAO H22 H N N 160 DAO H31 H N N 161 DAO H32 H N N 162 DAO H41 H N N 163 DAO H42 H N N 164 DAO H51 H N N 165 DAO H52 H N N 166 DAO H61 H N N 167 DAO H62 H N N 168 DAO H71 H N N 169 DAO H72 H N N 170 DAO H81 H N N 171 DAO H82 H N N 172 DAO H91 H N N 173 DAO H92 H N N 174 DAO H101 H N N 175 DAO H102 H N N 176 DAO H111 H N N 177 DAO H112 H N N 178 DAO H121 H N N 179 DAO H122 H N N 180 DAO H123 H N N 181 GAL C1 C N R 182 GAL C2 C N R 183 GAL C3 C N S 184 GAL C4 C N R 185 GAL C5 C N R 186 GAL C6 C N N 187 GAL O1 O N N 188 GAL O2 O N N 189 GAL O3 O N N 190 GAL O4 O N N 191 GAL O5 O N N 192 GAL O6 O N N 193 GAL H1 H N N 194 GAL H2 H N N 195 GAL H3 H N N 196 GAL H4 H N N 197 GAL H5 H N N 198 GAL H61 H N N 199 GAL H62 H N N 200 GAL HO1 H N N 201 GAL HO2 H N N 202 GAL HO3 H N N 203 GAL HO4 H N N 204 GAL HO6 H N N 205 GLN N N N N 206 GLN CA C N S 207 GLN C C N N 208 GLN O O N N 209 GLN CB C N N 210 GLN CG C N N 211 GLN CD C N N 212 GLN OE1 O N N 213 GLN NE2 N N N 214 GLN OXT O N N 215 GLN H H N N 216 GLN H2 H N N 217 GLN HA H N N 218 GLN HB2 H N N 219 GLN HB3 H N N 220 GLN HG2 H N N 221 GLN HG3 H N N 222 GLN HE21 H N N 223 GLN HE22 H N N 224 GLN HXT H N N 225 GLU N N N N 226 GLU CA C N S 227 GLU C C N N 228 GLU O O N N 229 GLU CB C N N 230 GLU CG C N N 231 GLU CD C N N 232 GLU OE1 O N N 233 GLU OE2 O N N 234 GLU OXT O N N 235 GLU H H N N 236 GLU H2 H N N 237 GLU HA H N N 238 GLU HB2 H N N 239 GLU HB3 H N N 240 GLU HG2 H N N 241 GLU HG3 H N N 242 GLU HE2 H N N 243 GLU HXT H N N 244 GLY N N N N 245 GLY CA C N N 246 GLY C C N N 247 GLY O O N N 248 GLY OXT O N N 249 GLY H H N N 250 GLY H2 H N N 251 GLY HA2 H N N 252 GLY HA3 H N N 253 GLY HXT H N N 254 HIS N N N N 255 HIS CA C N S 256 HIS C C N N 257 HIS O O N N 258 HIS CB C N N 259 HIS CG C Y N 260 HIS ND1 N Y N 261 HIS CD2 C Y N 262 HIS CE1 C Y N 263 HIS NE2 N Y N 264 HIS OXT O N N 265 HIS H H N N 266 HIS H2 H N N 267 HIS HA H N N 268 HIS HB2 H N N 269 HIS HB3 H N N 270 HIS HD1 H N N 271 HIS HD2 H N N 272 HIS HE1 H N N 273 HIS HE2 H N N 274 HIS HXT H N N 275 HOH O O N N 276 HOH H1 H N N 277 HOH H2 H N N 278 ILE N N N N 279 ILE CA C N S 280 ILE C C N N 281 ILE O O N N 282 ILE CB C N S 283 ILE CG1 C N N 284 ILE CG2 C N N 285 ILE CD1 C N N 286 ILE OXT O N N 287 ILE H H N N 288 ILE H2 H N N 289 ILE HA H N N 290 ILE HB H N N 291 ILE HG12 H N N 292 ILE HG13 H N N 293 ILE HG21 H N N 294 ILE HG22 H N N 295 ILE HG23 H N N 296 ILE HD11 H N N 297 ILE HD12 H N N 298 ILE HD13 H N N 299 ILE HXT H N N 300 LEU N N N N 301 LEU CA C N S 302 LEU C C N N 303 LEU O O N N 304 LEU CB C N N 305 LEU CG C N N 306 LEU CD1 C N N 307 LEU CD2 C N N 308 LEU OXT O N N 309 LEU H H N N 310 LEU H2 H N N 311 LEU HA H N N 312 LEU HB2 H N N 313 LEU HB3 H N N 314 LEU HG H N N 315 LEU HD11 H N N 316 LEU HD12 H N N 317 LEU HD13 H N N 318 LEU HD21 H N N 319 LEU HD22 H N N 320 LEU HD23 H N N 321 LEU HXT H N N 322 LYS N N N N 323 LYS CA C N S 324 LYS C C N N 325 LYS O O N N 326 LYS CB C N N 327 LYS CG C N N 328 LYS CD C N N 329 LYS CE C N N 330 LYS NZ N N N 331 LYS OXT O N N 332 LYS H H N N 333 LYS H2 H N N 334 LYS HA H N N 335 LYS HB2 H N N 336 LYS HB3 H N N 337 LYS HG2 H N N 338 LYS HG3 H N N 339 LYS HD2 H N N 340 LYS HD3 H N N 341 LYS HE2 H N N 342 LYS HE3 H N N 343 LYS HZ1 H N N 344 LYS HZ2 H N N 345 LYS HZ3 H N N 346 LYS HXT H N N 347 MET N N N N 348 MET CA C N S 349 MET C C N N 350 MET O O N N 351 MET CB C N N 352 MET CG C N N 353 MET SD S N N 354 MET CE C N N 355 MET OXT O N N 356 MET H H N N 357 MET H2 H N N 358 MET HA H N N 359 MET HB2 H N N 360 MET HB3 H N N 361 MET HG2 H N N 362 MET HG3 H N N 363 MET HE1 H N N 364 MET HE2 H N N 365 MET HE3 H N N 366 MET HXT H N N 367 OCT C1 C N N 368 OCT C2 C N N 369 OCT C3 C N N 370 OCT C4 C N N 371 OCT C5 C N N 372 OCT C6 C N N 373 OCT C7 C N N 374 OCT C8 C N N 375 OCT H11 H N N 376 OCT H12 H N N 377 OCT H13 H N N 378 OCT H21 H N N 379 OCT H22 H N N 380 OCT H31 H N N 381 OCT H32 H N N 382 OCT H41 H N N 383 OCT H42 H N N 384 OCT H51 H N N 385 OCT H52 H N N 386 OCT H61 H N N 387 OCT H62 H N N 388 OCT H71 H N N 389 OCT H72 H N N 390 OCT H81 H N N 391 OCT H82 H N N 392 OCT H83 H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 SPH C1 C N N 448 SPH O1 O N N 449 SPH C2 C N R 450 SPH N2 N N N 451 SPH C3 C N S 452 SPH O3 O N N 453 SPH C4 C N N 454 SPH C5 C N N 455 SPH C6 C N N 456 SPH C7 C N N 457 SPH C8 C N N 458 SPH C9 C N N 459 SPH C10 C N N 460 SPH C11 C N N 461 SPH C12 C N N 462 SPH C13 C N N 463 SPH C14 C N N 464 SPH C15 C N N 465 SPH C16 C N N 466 SPH C17 C N N 467 SPH C18 C N N 468 SPH H11 H N N 469 SPH H12 H N N 470 SPH HO1 H N N 471 SPH H2 H N N 472 SPH HN21 H N N 473 SPH HN22 H N N 474 SPH H3 H N N 475 SPH HO3 H N N 476 SPH H4 H N N 477 SPH H5 H N N 478 SPH H61 H N N 479 SPH H62 H N N 480 SPH H71 H N N 481 SPH H72 H N N 482 SPH H81 H N N 483 SPH H82 H N N 484 SPH H91 H N N 485 SPH H92 H N N 486 SPH H101 H N N 487 SPH H102 H N N 488 SPH H111 H N N 489 SPH H112 H N N 490 SPH H121 H N N 491 SPH H122 H N N 492 SPH H131 H N N 493 SPH H132 H N N 494 SPH H141 H N N 495 SPH H142 H N N 496 SPH H151 H N N 497 SPH H152 H N N 498 SPH H161 H N N 499 SPH H162 H N N 500 SPH H171 H N N 501 SPH H172 H N N 502 SPH H181 H N N 503 SPH H182 H N N 504 SPH H183 H N N 505 THR N N N N 506 THR CA C N S 507 THR C C N N 508 THR O O N N 509 THR CB C N R 510 THR OG1 O N N 511 THR CG2 C N N 512 THR OXT O N N 513 THR H H N N 514 THR H2 H N N 515 THR HA H N N 516 THR HB H N N 517 THR HG1 H N N 518 THR HG21 H N N 519 THR HG22 H N N 520 THR HG23 H N N 521 THR HXT H N N 522 TRP N N N N 523 TRP CA C N S 524 TRP C C N N 525 TRP O O N N 526 TRP CB C N N 527 TRP CG C Y N 528 TRP CD1 C Y N 529 TRP CD2 C Y N 530 TRP NE1 N Y N 531 TRP CE2 C Y N 532 TRP CE3 C Y N 533 TRP CZ2 C Y N 534 TRP CZ3 C Y N 535 TRP CH2 C Y N 536 TRP OXT O N N 537 TRP H H N N 538 TRP H2 H N N 539 TRP HA H N N 540 TRP HB2 H N N 541 TRP HB3 H N N 542 TRP HD1 H N N 543 TRP HE1 H N N 544 TRP HE3 H N N 545 TRP HZ2 H N N 546 TRP HZ3 H N N 547 TRP HH2 H N N 548 TRP HXT H N N 549 TYR N N N N 550 TYR CA C N S 551 TYR C C N N 552 TYR O O N N 553 TYR CB C N N 554 TYR CG C Y N 555 TYR CD1 C Y N 556 TYR CD2 C Y N 557 TYR CE1 C Y N 558 TYR CE2 C Y N 559 TYR CZ C Y N 560 TYR OH O N N 561 TYR OXT O N N 562 TYR H H N N 563 TYR H2 H N N 564 TYR HA H N N 565 TYR HB2 H N N 566 TYR HB3 H N N 567 TYR HD1 H N N 568 TYR HD2 H N N 569 TYR HE1 H N N 570 TYR HE2 H N N 571 TYR HH H N N 572 TYR HXT H N N 573 VAL N N N N 574 VAL CA C N S 575 VAL C C N N 576 VAL O O N N 577 VAL CB C N N 578 VAL CG1 C N N 579 VAL CG2 C N N 580 VAL OXT O N N 581 VAL H H N N 582 VAL H2 H N N 583 VAL HA H N N 584 VAL HB H N N 585 VAL HG11 H N N 586 VAL HG12 H N N 587 VAL HG13 H N N 588 VAL HG21 H N N 589 VAL HG22 H N N 590 VAL HG23 H N N 591 VAL HXT H N N 592 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BGC C2 C3 sing N N 70 BGC C2 C1 sing N N 71 BGC C2 O2 sing N N 72 BGC C2 H2 sing N N 73 BGC C3 C4 sing N N 74 BGC C3 O3 sing N N 75 BGC C3 H3 sing N N 76 BGC C4 C5 sing N N 77 BGC C4 O4 sing N N 78 BGC C4 H4 sing N N 79 BGC C5 C6 sing N N 80 BGC C5 O5 sing N N 81 BGC C5 H5 sing N N 82 BGC C6 O6 sing N N 83 BGC C6 H61 sing N N 84 BGC C6 H62 sing N N 85 BGC C1 O1 sing N N 86 BGC C1 O5 sing N N 87 BGC C1 H1 sing N N 88 BGC O1 HO1 sing N N 89 BGC O2 HO2 sing N N 90 BGC O3 HO3 sing N N 91 BGC O4 HO4 sing N N 92 BGC O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 D10 C1 C2 sing N N 107 D10 C1 H11 sing N N 108 D10 C1 H12 sing N N 109 D10 C1 H13 sing N N 110 D10 C2 C3 sing N N 111 D10 C2 H21 sing N N 112 D10 C2 H22 sing N N 113 D10 C3 C4 sing N N 114 D10 C3 H31 sing N N 115 D10 C3 H32 sing N N 116 D10 C4 C5 sing N N 117 D10 C4 H41 sing N N 118 D10 C4 H42 sing N N 119 D10 C5 C6 sing N N 120 D10 C5 H51 sing N N 121 D10 C5 H52 sing N N 122 D10 C6 C7 sing N N 123 D10 C6 H61 sing N N 124 D10 C6 H62 sing N N 125 D10 C7 C8 sing N N 126 D10 C7 H71 sing N N 127 D10 C7 H72 sing N N 128 D10 C8 C9 sing N N 129 D10 C8 H81 sing N N 130 D10 C8 H82 sing N N 131 D10 C9 C10 sing N N 132 D10 C9 H91 sing N N 133 D10 C9 H92 sing N N 134 D10 C10 H101 sing N N 135 D10 C10 H102 sing N N 136 D10 C10 H103 sing N N 137 DAO O1 C1 doub N N 138 DAO O2 C1 sing N N 139 DAO O2 HO2 sing N N 140 DAO C1 C2 sing N N 141 DAO C2 C3 sing N N 142 DAO C2 H21 sing N N 143 DAO C2 H22 sing N N 144 DAO C3 C4 sing N N 145 DAO C3 H31 sing N N 146 DAO C3 H32 sing N N 147 DAO C4 C5 sing N N 148 DAO C4 H41 sing N N 149 DAO C4 H42 sing N N 150 DAO C5 C6 sing N N 151 DAO C5 H51 sing N N 152 DAO C5 H52 sing N N 153 DAO C6 C7 sing N N 154 DAO C6 H61 sing N N 155 DAO C6 H62 sing N N 156 DAO C7 C8 sing N N 157 DAO C7 H71 sing N N 158 DAO C7 H72 sing N N 159 DAO C8 C9 sing N N 160 DAO C8 H81 sing N N 161 DAO C8 H82 sing N N 162 DAO C9 C10 sing N N 163 DAO C9 H91 sing N N 164 DAO C9 H92 sing N N 165 DAO C10 C11 sing N N 166 DAO C10 H101 sing N N 167 DAO C10 H102 sing N N 168 DAO C11 C12 sing N N 169 DAO C11 H111 sing N N 170 DAO C11 H112 sing N N 171 DAO C12 H121 sing N N 172 DAO C12 H122 sing N N 173 DAO C12 H123 sing N N 174 GAL C1 C2 sing N N 175 GAL C1 O1 sing N N 176 GAL C1 O5 sing N N 177 GAL C1 H1 sing N N 178 GAL C2 C3 sing N N 179 GAL C2 O2 sing N N 180 GAL C2 H2 sing N N 181 GAL C3 C4 sing N N 182 GAL C3 O3 sing N N 183 GAL C3 H3 sing N N 184 GAL C4 C5 sing N N 185 GAL C4 O4 sing N N 186 GAL C4 H4 sing N N 187 GAL C5 C6 sing N N 188 GAL C5 O5 sing N N 189 GAL C5 H5 sing N N 190 GAL C6 O6 sing N N 191 GAL C6 H61 sing N N 192 GAL C6 H62 sing N N 193 GAL O1 HO1 sing N N 194 GAL O2 HO2 sing N N 195 GAL O3 HO3 sing N N 196 GAL O4 HO4 sing N N 197 GAL O6 HO6 sing N N 198 GLN N CA sing N N 199 GLN N H sing N N 200 GLN N H2 sing N N 201 GLN CA C sing N N 202 GLN CA CB sing N N 203 GLN CA HA sing N N 204 GLN C O doub N N 205 GLN C OXT sing N N 206 GLN CB CG sing N N 207 GLN CB HB2 sing N N 208 GLN CB HB3 sing N N 209 GLN CG CD sing N N 210 GLN CG HG2 sing N N 211 GLN CG HG3 sing N N 212 GLN CD OE1 doub N N 213 GLN CD NE2 sing N N 214 GLN NE2 HE21 sing N N 215 GLN NE2 HE22 sing N N 216 GLN OXT HXT sing N N 217 GLU N CA sing N N 218 GLU N H sing N N 219 GLU N H2 sing N N 220 GLU CA C sing N N 221 GLU CA CB sing N N 222 GLU CA HA sing N N 223 GLU C O doub N N 224 GLU C OXT sing N N 225 GLU CB CG sing N N 226 GLU CB HB2 sing N N 227 GLU CB HB3 sing N N 228 GLU CG CD sing N N 229 GLU CG HG2 sing N N 230 GLU CG HG3 sing N N 231 GLU CD OE1 doub N N 232 GLU CD OE2 sing N N 233 GLU OE2 HE2 sing N N 234 GLU OXT HXT sing N N 235 GLY N CA sing N N 236 GLY N H sing N N 237 GLY N H2 sing N N 238 GLY CA C sing N N 239 GLY CA HA2 sing N N 240 GLY CA HA3 sing N N 241 GLY C O doub N N 242 GLY C OXT sing N N 243 GLY OXT HXT sing N N 244 HIS N CA sing N N 245 HIS N H sing N N 246 HIS N H2 sing N N 247 HIS CA C sing N N 248 HIS CA CB sing N N 249 HIS CA HA sing N N 250 HIS C O doub N N 251 HIS C OXT sing N N 252 HIS CB CG sing N N 253 HIS CB HB2 sing N N 254 HIS CB HB3 sing N N 255 HIS CG ND1 sing Y N 256 HIS CG CD2 doub Y N 257 HIS ND1 CE1 doub Y N 258 HIS ND1 HD1 sing N N 259 HIS CD2 NE2 sing Y N 260 HIS CD2 HD2 sing N N 261 HIS CE1 NE2 sing Y N 262 HIS CE1 HE1 sing N N 263 HIS NE2 HE2 sing N N 264 HIS OXT HXT sing N N 265 HOH O H1 sing N N 266 HOH O H2 sing N N 267 ILE N CA sing N N 268 ILE N H sing N N 269 ILE N H2 sing N N 270 ILE CA C sing N N 271 ILE CA CB sing N N 272 ILE CA HA sing N N 273 ILE C O doub N N 274 ILE C OXT sing N N 275 ILE CB CG1 sing N N 276 ILE CB CG2 sing N N 277 ILE CB HB sing N N 278 ILE CG1 CD1 sing N N 279 ILE CG1 HG12 sing N N 280 ILE CG1 HG13 sing N N 281 ILE CG2 HG21 sing N N 282 ILE CG2 HG22 sing N N 283 ILE CG2 HG23 sing N N 284 ILE CD1 HD11 sing N N 285 ILE CD1 HD12 sing N N 286 ILE CD1 HD13 sing N N 287 ILE OXT HXT sing N N 288 LEU N CA sing N N 289 LEU N H sing N N 290 LEU N H2 sing N N 291 LEU CA C sing N N 292 LEU CA CB sing N N 293 LEU CA HA sing N N 294 LEU C O doub N N 295 LEU C OXT sing N N 296 LEU CB CG sing N N 297 LEU CB HB2 sing N N 298 LEU CB HB3 sing N N 299 LEU CG CD1 sing N N 300 LEU CG CD2 sing N N 301 LEU CG HG sing N N 302 LEU CD1 HD11 sing N N 303 LEU CD1 HD12 sing N N 304 LEU CD1 HD13 sing N N 305 LEU CD2 HD21 sing N N 306 LEU CD2 HD22 sing N N 307 LEU CD2 HD23 sing N N 308 LEU OXT HXT sing N N 309 LYS N CA sing N N 310 LYS N H sing N N 311 LYS N H2 sing N N 312 LYS CA C sing N N 313 LYS CA CB sing N N 314 LYS CA HA sing N N 315 LYS C O doub N N 316 LYS C OXT sing N N 317 LYS CB CG sing N N 318 LYS CB HB2 sing N N 319 LYS CB HB3 sing N N 320 LYS CG CD sing N N 321 LYS CG HG2 sing N N 322 LYS CG HG3 sing N N 323 LYS CD CE sing N N 324 LYS CD HD2 sing N N 325 LYS CD HD3 sing N N 326 LYS CE NZ sing N N 327 LYS CE HE2 sing N N 328 LYS CE HE3 sing N N 329 LYS NZ HZ1 sing N N 330 LYS NZ HZ2 sing N N 331 LYS NZ HZ3 sing N N 332 LYS OXT HXT sing N N 333 MET N CA sing N N 334 MET N H sing N N 335 MET N H2 sing N N 336 MET CA C sing N N 337 MET CA CB sing N N 338 MET CA HA sing N N 339 MET C O doub N N 340 MET C OXT sing N N 341 MET CB CG sing N N 342 MET CB HB2 sing N N 343 MET CB HB3 sing N N 344 MET CG SD sing N N 345 MET CG HG2 sing N N 346 MET CG HG3 sing N N 347 MET SD CE sing N N 348 MET CE HE1 sing N N 349 MET CE HE2 sing N N 350 MET CE HE3 sing N N 351 MET OXT HXT sing N N 352 OCT C1 C2 sing N N 353 OCT C1 H11 sing N N 354 OCT C1 H12 sing N N 355 OCT C1 H13 sing N N 356 OCT C2 C3 sing N N 357 OCT C2 H21 sing N N 358 OCT C2 H22 sing N N 359 OCT C3 C4 sing N N 360 OCT C3 H31 sing N N 361 OCT C3 H32 sing N N 362 OCT C4 C5 sing N N 363 OCT C4 H41 sing N N 364 OCT C4 H42 sing N N 365 OCT C5 C6 sing N N 366 OCT C5 H51 sing N N 367 OCT C5 H52 sing N N 368 OCT C6 C7 sing N N 369 OCT C6 H61 sing N N 370 OCT C6 H62 sing N N 371 OCT C7 C8 sing N N 372 OCT C7 H71 sing N N 373 OCT C7 H72 sing N N 374 OCT C8 H81 sing N N 375 OCT C8 H82 sing N N 376 OCT C8 H83 sing N N 377 PHE N CA sing N N 378 PHE N H sing N N 379 PHE N H2 sing N N 380 PHE CA C sing N N 381 PHE CA CB sing N N 382 PHE CA HA sing N N 383 PHE C O doub N N 384 PHE C OXT sing N N 385 PHE CB CG sing N N 386 PHE CB HB2 sing N N 387 PHE CB HB3 sing N N 388 PHE CG CD1 doub Y N 389 PHE CG CD2 sing Y N 390 PHE CD1 CE1 sing Y N 391 PHE CD1 HD1 sing N N 392 PHE CD2 CE2 doub Y N 393 PHE CD2 HD2 sing N N 394 PHE CE1 CZ doub Y N 395 PHE CE1 HE1 sing N N 396 PHE CE2 CZ sing Y N 397 PHE CE2 HE2 sing N N 398 PHE CZ HZ sing N N 399 PHE OXT HXT sing N N 400 PRO N CA sing N N 401 PRO N CD sing N N 402 PRO N H sing N N 403 PRO CA C sing N N 404 PRO CA CB sing N N 405 PRO CA HA sing N N 406 PRO C O doub N N 407 PRO C OXT sing N N 408 PRO CB CG sing N N 409 PRO CB HB2 sing N N 410 PRO CB HB3 sing N N 411 PRO CG CD sing N N 412 PRO CG HG2 sing N N 413 PRO CG HG3 sing N N 414 PRO CD HD2 sing N N 415 PRO CD HD3 sing N N 416 PRO OXT HXT sing N N 417 SER N CA sing N N 418 SER N H sing N N 419 SER N H2 sing N N 420 SER CA C sing N N 421 SER CA CB sing N N 422 SER CA HA sing N N 423 SER C O doub N N 424 SER C OXT sing N N 425 SER CB OG sing N N 426 SER CB HB2 sing N N 427 SER CB HB3 sing N N 428 SER OG HG sing N N 429 SER OXT HXT sing N N 430 SPH C1 O1 sing N N 431 SPH C1 C2 sing N N 432 SPH C1 H11 sing N N 433 SPH C1 H12 sing N N 434 SPH O1 HO1 sing N N 435 SPH C2 N2 sing N N 436 SPH C2 C3 sing N N 437 SPH C2 H2 sing N N 438 SPH N2 HN21 sing N N 439 SPH N2 HN22 sing N N 440 SPH C3 O3 sing N N 441 SPH C3 C4 sing N N 442 SPH C3 H3 sing N N 443 SPH O3 HO3 sing N N 444 SPH C4 C5 doub N Z 445 SPH C4 H4 sing N N 446 SPH C5 C6 sing N N 447 SPH C5 H5 sing N N 448 SPH C6 C7 sing N N 449 SPH C6 H61 sing N N 450 SPH C6 H62 sing N N 451 SPH C7 C8 sing N N 452 SPH C7 H71 sing N N 453 SPH C7 H72 sing N N 454 SPH C8 C9 sing N N 455 SPH C8 H81 sing N N 456 SPH C8 H82 sing N N 457 SPH C9 C10 sing N N 458 SPH C9 H91 sing N N 459 SPH C9 H92 sing N N 460 SPH C10 C11 sing N N 461 SPH C10 H101 sing N N 462 SPH C10 H102 sing N N 463 SPH C11 C12 sing N N 464 SPH C11 H111 sing N N 465 SPH C11 H112 sing N N 466 SPH C12 C13 sing N N 467 SPH C12 H121 sing N N 468 SPH C12 H122 sing N N 469 SPH C13 C14 sing N N 470 SPH C13 H131 sing N N 471 SPH C13 H132 sing N N 472 SPH C14 C15 sing N N 473 SPH C14 H141 sing N N 474 SPH C14 H142 sing N N 475 SPH C15 C16 sing N N 476 SPH C15 H151 sing N N 477 SPH C15 H152 sing N N 478 SPH C16 C17 sing N N 479 SPH C16 H161 sing N N 480 SPH C16 H162 sing N N 481 SPH C17 C18 sing N N 482 SPH C17 H171 sing N N 483 SPH C17 H172 sing N N 484 SPH C18 H181 sing N N 485 SPH C18 H182 sing N N 486 SPH C18 H183 sing N N 487 THR N CA sing N N 488 THR N H sing N N 489 THR N H2 sing N N 490 THR CA C sing N N 491 THR CA CB sing N N 492 THR CA HA sing N N 493 THR C O doub N N 494 THR C OXT sing N N 495 THR CB OG1 sing N N 496 THR CB CG2 sing N N 497 THR CB HB sing N N 498 THR OG1 HG1 sing N N 499 THR CG2 HG21 sing N N 500 THR CG2 HG22 sing N N 501 THR CG2 HG23 sing N N 502 THR OXT HXT sing N N 503 TRP N CA sing N N 504 TRP N H sing N N 505 TRP N H2 sing N N 506 TRP CA C sing N N 507 TRP CA CB sing N N 508 TRP CA HA sing N N 509 TRP C O doub N N 510 TRP C OXT sing N N 511 TRP CB CG sing N N 512 TRP CB HB2 sing N N 513 TRP CB HB3 sing N N 514 TRP CG CD1 doub Y N 515 TRP CG CD2 sing Y N 516 TRP CD1 NE1 sing Y N 517 TRP CD1 HD1 sing N N 518 TRP CD2 CE2 doub Y N 519 TRP CD2 CE3 sing Y N 520 TRP NE1 CE2 sing Y N 521 TRP NE1 HE1 sing N N 522 TRP CE2 CZ2 sing Y N 523 TRP CE3 CZ3 doub Y N 524 TRP CE3 HE3 sing N N 525 TRP CZ2 CH2 doub Y N 526 TRP CZ2 HZ2 sing N N 527 TRP CZ3 CH2 sing Y N 528 TRP CZ3 HZ3 sing N N 529 TRP CH2 HH2 sing N N 530 TRP OXT HXT sing N N 531 TYR N CA sing N N 532 TYR N H sing N N 533 TYR N H2 sing N N 534 TYR CA C sing N N 535 TYR CA CB sing N N 536 TYR CA HA sing N N 537 TYR C O doub N N 538 TYR C OXT sing N N 539 TYR CB CG sing N N 540 TYR CB HB2 sing N N 541 TYR CB HB3 sing N N 542 TYR CG CD1 doub Y N 543 TYR CG CD2 sing Y N 544 TYR CD1 CE1 sing Y N 545 TYR CD1 HD1 sing N N 546 TYR CD2 CE2 doub Y N 547 TYR CD2 HD2 sing N N 548 TYR CE1 CZ doub Y N 549 TYR CE1 HE1 sing N N 550 TYR CE2 CZ sing Y N 551 TYR CE2 HE2 sing N N 552 TYR CZ OH sing N N 553 TYR OH HH sing N N 554 TYR OXT HXT sing N N 555 VAL N CA sing N N 556 VAL N H sing N N 557 VAL N H2 sing N N 558 VAL CA C sing N N 559 VAL CA CB sing N N 560 VAL CA HA sing N N 561 VAL C O doub N N 562 VAL C OXT sing N N 563 VAL CB CG1 sing N N 564 VAL CB CG2 sing N N 565 VAL CB HB sing N N 566 VAL CG1 HG11 sing N N 567 VAL CG1 HG12 sing N N 568 VAL CG1 HG13 sing N N 569 VAL CG2 HG21 sing N N 570 VAL CG2 HG22 sing N N 571 VAL CG2 HG23 sing N N 572 VAL OXT HXT sing N N 573 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 BGC 1 B BGC 1 B LAT 300 n B 2 GAL 2 B GAL 2 B LAT 300 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-Glcp]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BGC 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 SPHINGOSINE SPH 4 'LAURIC ACID' DAO 5 N-OCTANE OCT 6 DECANE D10 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2EUM _pdbx_initial_refinement_model.details 'PDB ENTRY 2EUM' #