HEADER TRANSFERASE 04-NOV-05 2EWM TITLE CRYSTAL STRUCTURE OF THE (S)-SPECIFIC 1-PHENYLETHANOL DEHYDROGENASE OF TITLE 2 THE DENITRIFYING BACTERIUM STRAIN EBN1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: (S)-1-PHENYLETHANOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AZOARCUS; SOURCE 3 ORGANISM_TAXID: 12960; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: TG1; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PJOE2702 KEYWDS DEHYDROGENASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.W.HOEFFKEN REVDAT 6 23-AUG-23 2EWM 1 REMARK REVDAT 5 18-OCT-17 2EWM 1 REMARK REVDAT 4 13-JUL-11 2EWM 1 VERSN REVDAT 3 19-JAN-10 2EWM 1 REMARK REVDAT 2 24-FEB-09 2EWM 1 VERSN REVDAT 1 14-MAR-06 2EWM 0 JRNL AUTH H.W.HOEFFKEN,M.DUONG,T.FRIEDRICH,M.BREUER,B.HAUER, JRNL AUTH 2 R.REINHARDT,R.RABUS,J.HEIDER JRNL TITL CRYSTAL STRUCTURE AND ENZYME KINETICS OF THE (S)-SPECIFIC JRNL TITL 2 1-PHENYLETHANOL DEHYDROGENASE OF THE DENITRIFYING BACTERIUM JRNL TITL 3 STRAIN EBN1 JRNL REF BIOCHEMISTRY V. 45 82 2006 JRNL REFN ISSN 0006-2960 JRNL PMID 16388583 JRNL DOI 10.1021/BI051596B REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 5.0 REMARK 3 NUMBER OF REFLECTIONS : 15349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 804 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 4.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 122 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.30 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.610 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EWM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00885 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16156 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 28.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.12200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: PDB ENTRY 2EW8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12-18% PEG 8000, 0.05M POTASSIUM REMARK 280 PHASPHATE, 3% 2-METHYL-2,4-PENTANEDIOL CRYSTAL WAS SOAKED WITH REMARK 280 5MM NAD+ AND 5MM (R)-1-PHENYLETHANOL, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 118.10000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.20000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 177.15000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.20000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 59.05000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.20000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.20000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 177.15000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.20000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.20000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 59.05000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 118.10000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE TETRAMER GENERATED BY A TWO REMARK 300 FOLD AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 19860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -175.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 116.80000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -116.80000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -236.20000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 702 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 B 701 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 750 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 193 REMARK 465 ALA A 194 REMARK 465 SER A 195 REMARK 465 ALA A 196 REMARK 465 LEU A 197 REMARK 465 SER A 198 REMARK 465 ALA A 199 REMARK 465 MET A 200 REMARK 465 PHE A 201 REMARK 465 ASP A 202 REMARK 465 VAL A 203 REMARK 465 LEU A 204 REMARK 465 PRO A 205 REMARK 465 ASN A 206 REMARK 465 MET A 207 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR B 144 OH TYR B 144 7734 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 63 0.98 -59.54 REMARK 500 ARG A 82 161.93 178.95 REMARK 500 TYR A 93 57.73 -141.82 REMARK 500 THR A 140 -150.92 -120.35 REMARK 500 SER A 185 -137.00 -90.15 REMARK 500 PRO A 212 99.72 -67.43 REMARK 500 ARG A 213 143.91 174.33 REMARK 500 ALA B 42 54.42 -117.05 REMARK 500 TYR B 93 60.39 -152.83 REMARK 500 THR B 140 -159.68 -123.46 REMARK 500 TYR B 151 25.66 -141.47 REMARK 500 SER B 185 -148.96 -81.06 REMARK 500 SER B 198 -19.28 -49.50 REMARK 500 VAL B 203 -73.23 -93.82 REMARK 500 ASN B 206 33.48 -84.29 REMARK 500 MET B 207 -58.05 -141.67 REMARK 500 PRO B 212 70.22 -68.81 REMARK 500 ASP B 243 21.99 -141.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 257 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2EW8 RELATED DB: PDB REMARK 900 SAME PROTEIN WITHOUT NAD+ DBREF 2EWM A 1 249 GB 56476740 YP_158329 1 249 DBREF 2EWM B 1 249 GB 56476740 YP_158329 1 249 SEQRES 1 A 249 MET THR GLN ARG LEU LYS ASP LYS LEU ALA VAL ILE THR SEQRES 2 A 249 GLY GLY ALA ASN GLY ILE GLY ARG ALA ILE ALA GLU ARG SEQRES 3 A 249 PHE ALA VAL GLU GLY ALA ASP ILE ALA ILE ALA ASP LEU SEQRES 4 A 249 VAL PRO ALA PRO GLU ALA GLU ALA ALA ILE ARG ASN LEU SEQRES 5 A 249 GLY ARG ARG VAL LEU THR VAL LYS CYS ASP VAL SER GLN SEQRES 6 A 249 PRO GLY ASP VAL GLU ALA PHE GLY LYS GLN VAL ILE SER SEQRES 7 A 249 THR PHE GLY ARG CYS ASP ILE LEU VAL ASN ASN ALA GLY SEQRES 8 A 249 ILE TYR PRO LEU ILE PRO PHE ASP GLU LEU THR PHE GLU SEQRES 9 A 249 GLN TRP LYS LYS THR PHE GLU ILE ASN VAL ASP SER GLY SEQRES 10 A 249 PHE LEU MET ALA LYS ALA PHE VAL PRO GLY MET LYS ARG SEQRES 11 A 249 ASN GLY TRP GLY ARG ILE ILE ASN LEU THR SER THR THR SEQRES 12 A 249 TYR TRP LEU LYS ILE GLU ALA TYR THR HIS TYR ILE SER SEQRES 13 A 249 THR LYS ALA ALA ASN ILE GLY PHE THR ARG ALA LEU ALA SEQRES 14 A 249 SER ASP LEU GLY LYS ASP GLY ILE THR VAL ASN ALA ILE SEQRES 15 A 249 ALA PRO SER LEU VAL ARG THR ALA THR THR GLU ALA SER SEQRES 16 A 249 ALA LEU SER ALA MET PHE ASP VAL LEU PRO ASN MET LEU SEQRES 17 A 249 GLN ALA ILE PRO ARG LEU GLN VAL PRO LEU ASP LEU THR SEQRES 18 A 249 GLY ALA ALA ALA PHE LEU ALA SER ASP ASP ALA SER PHE SEQRES 19 A 249 ILE THR GLY GLN THR LEU ALA VAL ASP GLY GLY MET VAL SEQRES 20 A 249 ARG HIS SEQRES 1 B 249 MET THR GLN ARG LEU LYS ASP LYS LEU ALA VAL ILE THR SEQRES 2 B 249 GLY GLY ALA ASN GLY ILE GLY ARG ALA ILE ALA GLU ARG SEQRES 3 B 249 PHE ALA VAL GLU GLY ALA ASP ILE ALA ILE ALA ASP LEU SEQRES 4 B 249 VAL PRO ALA PRO GLU ALA GLU ALA ALA ILE ARG ASN LEU SEQRES 5 B 249 GLY ARG ARG VAL LEU THR VAL LYS CYS ASP VAL SER GLN SEQRES 6 B 249 PRO GLY ASP VAL GLU ALA PHE GLY LYS GLN VAL ILE SER SEQRES 7 B 249 THR PHE GLY ARG CYS ASP ILE LEU VAL ASN ASN ALA GLY SEQRES 8 B 249 ILE TYR PRO LEU ILE PRO PHE ASP GLU LEU THR PHE GLU SEQRES 9 B 249 GLN TRP LYS LYS THR PHE GLU ILE ASN VAL ASP SER GLY SEQRES 10 B 249 PHE LEU MET ALA LYS ALA PHE VAL PRO GLY MET LYS ARG SEQRES 11 B 249 ASN GLY TRP GLY ARG ILE ILE ASN LEU THR SER THR THR SEQRES 12 B 249 TYR TRP LEU LYS ILE GLU ALA TYR THR HIS TYR ILE SER SEQRES 13 B 249 THR LYS ALA ALA ASN ILE GLY PHE THR ARG ALA LEU ALA SEQRES 14 B 249 SER ASP LEU GLY LYS ASP GLY ILE THR VAL ASN ALA ILE SEQRES 15 B 249 ALA PRO SER LEU VAL ARG THR ALA THR THR GLU ALA SER SEQRES 16 B 249 ALA LEU SER ALA MET PHE ASP VAL LEU PRO ASN MET LEU SEQRES 17 B 249 GLN ALA ILE PRO ARG LEU GLN VAL PRO LEU ASP LEU THR SEQRES 18 B 249 GLY ALA ALA ALA PHE LEU ALA SER ASP ASP ALA SER PHE SEQRES 19 B 249 ILE THR GLY GLN THR LEU ALA VAL ASP GLY GLY MET VAL SEQRES 20 B 249 ARG HIS HET SO4 A 702 5 HET NAD A 257 44 HET SO4 B 701 5 HET NAD B 256 44 HETNAM SO4 SULFATE ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 NAD 2(C21 H27 N7 O14 P2) FORMUL 7 HOH *167(H2 O) HELIX 1 1 ASN A 17 GLU A 30 1 14 HELIX 2 2 ALA A 42 ASN A 51 1 10 HELIX 3 3 GLN A 65 GLY A 81 1 17 HELIX 4 4 PRO A 97 LEU A 101 5 5 HELIX 5 5 THR A 102 VAL A 114 1 13 HELIX 6 6 VAL A 114 GLY A 132 1 19 HELIX 7 7 SER A 141 LEU A 146 5 6 HELIX 8 8 TYR A 151 GLY A 173 1 23 HELIX 9 9 PRO A 217 ALA A 228 1 12 HELIX 10 10 SER A 229 SER A 233 5 5 HELIX 11 11 ASN B 17 GLU B 30 1 14 HELIX 12 12 ALA B 42 ASN B 51 1 10 HELIX 13 13 GLN B 65 SER B 78 1 14 HELIX 14 14 THR B 102 VAL B 114 1 13 HELIX 15 15 VAL B 114 ASN B 131 1 18 HELIX 16 16 SER B 141 LEU B 146 5 6 HELIX 17 17 TYR B 151 GLY B 173 1 23 HELIX 18 18 THR B 189 ALA B 194 1 6 HELIX 19 19 SER B 195 VAL B 203 5 9 HELIX 20 20 LEU B 204 GLN B 209 1 6 HELIX 21 21 PRO B 217 ALA B 228 1 12 HELIX 22 22 SER B 229 SER B 233 5 5 SHEET 1 A 7 VAL A 56 LYS A 60 0 SHEET 2 A 7 ASP A 33 ASP A 38 1 N ILE A 36 O LEU A 57 SHEET 3 A 7 LEU A 9 THR A 13 1 N ALA A 10 O ASP A 33 SHEET 4 A 7 ILE A 85 ASN A 88 1 O ILE A 85 N VAL A 11 SHEET 5 A 7 GLY A 134 LEU A 139 1 O ARG A 135 N LEU A 86 SHEET 6 A 7 ILE A 177 PRO A 184 1 O THR A 178 N ILE A 136 SHEET 7 A 7 THR A 239 VAL A 242 1 O LEU A 240 N ALA A 181 SHEET 1 B 7 VAL B 56 LYS B 60 0 SHEET 2 B 7 ALA B 32 ASP B 38 1 N ILE B 36 O LEU B 57 SHEET 3 B 7 LYS B 8 THR B 13 1 N LYS B 8 O ASP B 33 SHEET 4 B 7 ILE B 85 ASN B 88 1 O ILE B 85 N VAL B 11 SHEET 5 B 7 GLY B 134 LEU B 139 1 O ARG B 135 N LEU B 86 SHEET 6 B 7 ILE B 177 PRO B 184 1 O ASN B 180 N ASN B 138 SHEET 7 B 7 THR B 239 VAL B 242 1 O LEU B 240 N ALA B 181 SITE 1 AC1 4 HIS A 249 TYR B 144 TRP B 145 ARG B 166 SITE 1 AC2 4 TYR A 144 TRP A 145 ARG A 166 HIS B 249 SITE 1 AC3 26 GLY B 14 ASN B 17 GLY B 18 ILE B 19 SITE 2 AC3 26 ASP B 38 LEU B 39 CYS B 61 ASP B 62 SITE 3 AC3 26 VAL B 63 ASN B 89 ALA B 90 TYR B 93 SITE 4 AC3 26 ILE B 112 THR B 140 SER B 141 TYR B 154 SITE 5 AC3 26 LYS B 158 PRO B 184 SER B 185 LEU B 186 SITE 6 AC3 26 VAL B 187 THR B 189 THR B 191 THR B 192 SITE 7 AC3 26 HOH B 742 HOH B 786 SITE 1 AC4 23 GLY A 14 ASN A 17 GLY A 18 ILE A 19 SITE 2 AC4 23 ASP A 38 LEU A 39 CYS A 61 ASP A 62 SITE 3 AC4 23 VAL A 63 ASN A 89 TYR A 93 THR A 140 SITE 4 AC4 23 SER A 141 TYR A 154 LYS A 158 PRO A 184 SITE 5 AC4 23 SER A 185 LEU A 186 VAL A 187 THR A 189 SITE 6 AC4 23 THR A 191 THR A 192 HOH A 760 CRYST1 58.400 58.400 236.200 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017123 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017123 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004234 0.00000