HEADER SIGNALING PROTEIN 28-NOV-05 2F5Y TITLE CRYSTAL STRUCTURE OF THE PDZ DOMAIN FROM HUMAN RGS-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATOR OF G-PROTEIN SIGNALLING 3 ISOFORM 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PDZ DOMAIN (RESIDUES 15-103); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 STRAIN: BL21 (DE3); SOURCE 6 GENE: RGS3; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS PDZ DOMAIN, RGS-3, HUMAN, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.UGOCHUKWU,G.BERRIDGE,C.JOHANSSON,C.SMEE,P.SAVITSKY,N.BURGESS, AUTHOR 2 S.COLEBROOK,X.YANG,J.ELKINS,D.DOYLE,A.TURNBULL,E.PAPAGRIGORIOU, AUTHOR 3 J.DEBRECZENI,G.BUNKOCZI,F.GORREC,F.VON DELFT,C.ARROWSMITH, AUTHOR 4 M.SUNDSTROM,J.WEIGELT,A.EDWARDS,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 6 16-OCT-24 2F5Y 1 REMARK REVDAT 5 23-AUG-23 2F5Y 1 REMARK SEQADV REVDAT 4 13-JUL-11 2F5Y 1 VERSN REVDAT 3 28-APR-10 2F5Y 1 AUTHOR JRNL REVDAT 2 24-FEB-09 2F5Y 1 VERSN REVDAT 1 13-DEC-05 2F5Y 0 JRNL AUTH E.UGOCHUKWU,G.BERRIDGE,C.JOHANSSON,C.SMEE,P.SAVITSKY, JRNL AUTH 2 N.BURGESS,S.COLEBROOK,X.YANG,J.ELKINS,D.DOYLE,A.TURNBULL, JRNL AUTH 3 E.PAPAGRIGORIOU,J.DEBRECZENI,G.BUNKOCZI,F.GORREC, JRNL AUTH 4 F.VON DELFT,C.ARROWSMITH,M.SUNDSTROM,J.WEIGELT,A.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF THE PDZ DOMAIN FROM HUMAN RGS-3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 7967 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 386 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 559 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1267 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.18000 REMARK 3 B22 (A**2) : 4.63000 REMARK 3 B33 (A**2) : -2.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.369 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.263 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.045 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1310 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 921 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1779 ; 1.484 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2223 ; 1.524 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 164 ;10.573 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;36.290 ;21.964 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 223 ;15.598 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;13.663 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 201 ; 0.203 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1437 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 268 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 223 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1020 ; 0.201 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 612 ; 0.166 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 763 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 54 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.137 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.093 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 856 ; 3.122 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 331 ; 1.058 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1327 ; 4.152 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 523 ; 6.807 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 451 ; 8.990 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 14 A 95 4 REMARK 3 1 B 14 B 95 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1042 ; 0.55 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1042 ; 0.83 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 95 REMARK 3 ORIGIN FOR THE GROUP (A): 11.5012 -4.6324 -21.7192 REMARK 3 T TENSOR REMARK 3 T11: -0.2384 T22: -0.1788 REMARK 3 T33: -0.1983 T12: -0.0032 REMARK 3 T13: -0.0152 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 3.3408 L22: 5.4178 REMARK 3 L33: 6.5406 L12: 0.8394 REMARK 3 L13: 1.0520 L23: 2.0034 REMARK 3 S TENSOR REMARK 3 S11: 0.1600 S12: -0.1435 S13: -0.0045 REMARK 3 S21: 0.1205 S22: -0.2332 S23: -0.0215 REMARK 3 S31: 0.1048 S32: 0.0070 S33: 0.0732 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 14 B 95 REMARK 3 ORIGIN FOR THE GROUP (A): 11.1807 -16.5929 -43.8321 REMARK 3 T TENSOR REMARK 3 T11: -0.1728 T22: -0.1803 REMARK 3 T33: -0.1289 T12: -0.0071 REMARK 3 T13: -0.0487 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 4.5605 L22: 6.6532 REMARK 3 L33: 6.0421 L12: -1.2058 REMARK 3 L13: 0.3362 L23: 1.5861 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: 0.3398 S13: -0.0193 REMARK 3 S21: -0.3723 S22: -0.1232 S23: 0.6764 REMARK 3 S31: -0.0952 S32: -0.2881 S33: 0.1456 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035491. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9788 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8381 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 49.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1I92.PDB, 1QAU.PDB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULPHATE, 0.1M MES, 10% REMARK 280 DIOXANE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 45.55500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.07000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.55500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.07000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 13 REMARK 465 PRO A 96 REMARK 465 GLN A 97 REMARK 465 VAL A 98 REMARK 465 LYS A 99 REMARK 465 PRO A 100 REMARK 465 GLY A 101 REMARK 465 PRO A 102 REMARK 465 ASP A 103 REMARK 465 SER B 13 REMARK 465 PRO B 96 REMARK 465 GLN B 97 REMARK 465 VAL B 98 REMARK 465 LYS B 99 REMARK 465 PRO B 100 REMARK 465 GLY B 101 REMARK 465 PRO B 102 REMARK 465 ASP B 103 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 LYS A 72 NZ REMARK 470 MET A 94 CE REMARK 470 ARG B 17 NE CZ NH1 NH2 REMARK 470 LYS B 25 CG CD CE NZ REMARK 470 ASP B 26 CG OD1 OD2 REMARK 470 GLN B 56 OE1 NE2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 GLU B 86 OE1 OE2 REMARK 470 TRP B 92 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 92 CZ3 CH2 REMARK 470 MET B 94 CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 34 159.42 72.56 REMARK 500 LEU A 57 -9.31 78.19 REMARK 500 ASN A 64 -124.76 53.20 REMARK 500 HIS A 70 -14.28 -160.35 REMARK 500 CYS B 34 161.48 80.97 REMARK 500 LEU B 57 -3.28 75.27 REMARK 500 SER B 85 -61.50 -108.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 69 HIS A 70 -105.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1I92 RELATED DB: PDB REMARK 900 STRUCTURAL BASIS OF THE NHERF PDZ1-CFTR INTERACTION REMARK 900 RELATED ID: 1QAU RELATED DB: PDB REMARK 900 UNEXPECTED MODES OF PDZ DOMAIN SCAFFOLDING REVEALED BY STRUCTURE OF REMARK 900 NNOS-SYNTROPHIN COMPLEX DBREF 2F5Y A 15 103 UNP P49796 RGS3_HUMAN 15 103 DBREF 2F5Y B 15 103 UNP P49796 RGS3_HUMAN 15 103 SEQADV 2F5Y SER A 13 UNP P49796 CLONING ARTIFACT SEQADV 2F5Y MET A 14 UNP P49796 CLONING ARTIFACT SEQADV 2F5Y SER B 13 UNP P49796 CLONING ARTIFACT SEQADV 2F5Y MET B 14 UNP P49796 CLONING ARTIFACT SEQRES 1 A 91 SER MET ARG TYR ARG GLN ILE THR ILE PRO ARG GLY LYS SEQRES 2 A 91 ASP GLY PHE GLY PHE THR ILE CYS CYS ASP SER PRO VAL SEQRES 3 A 91 ARG VAL GLN ALA VAL ASP SER GLY GLY PRO ALA GLU ARG SEQRES 4 A 91 ALA GLY LEU GLN GLN LEU ASP THR VAL LEU GLN LEU ASN SEQRES 5 A 91 GLU ARG PRO VAL GLU HIS TRP LYS CYS VAL GLU LEU ALA SEQRES 6 A 91 HIS GLU ILE ARG SER CYS PRO SER GLU ILE ILE LEU LEU SEQRES 7 A 91 VAL TRP ARG MET VAL PRO GLN VAL LYS PRO GLY PRO ASP SEQRES 1 B 91 SER MET ARG TYR ARG GLN ILE THR ILE PRO ARG GLY LYS SEQRES 2 B 91 ASP GLY PHE GLY PHE THR ILE CYS CYS ASP SER PRO VAL SEQRES 3 B 91 ARG VAL GLN ALA VAL ASP SER GLY GLY PRO ALA GLU ARG SEQRES 4 B 91 ALA GLY LEU GLN GLN LEU ASP THR VAL LEU GLN LEU ASN SEQRES 5 B 91 GLU ARG PRO VAL GLU HIS TRP LYS CYS VAL GLU LEU ALA SEQRES 6 B 91 HIS GLU ILE ARG SER CYS PRO SER GLU ILE ILE LEU LEU SEQRES 7 B 91 VAL TRP ARG MET VAL PRO GLN VAL LYS PRO GLY PRO ASP HET SO4 A 1 5 HET SO4 A 2 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *42(H2 O) HELIX 1 1 GLY A 47 GLY A 53 1 7 HELIX 2 2 LYS A 72 SER A 82 1 11 HELIX 3 3 GLY B 47 GLY B 53 1 7 HELIX 4 4 LYS B 72 SER B 82 1 11 SHEET 1 A 4 ARG A 15 PRO A 22 0 SHEET 2 A 4 GLU A 86 ARG A 93 -1 O VAL A 91 N ARG A 17 SHEET 3 A 4 THR A 59 LEU A 63 -1 N THR A 59 O TRP A 92 SHEET 4 A 4 ARG A 66 PRO A 67 -1 O ARG A 66 N LEU A 63 SHEET 1 B 2 PHE A 30 CYS A 33 0 SHEET 2 B 2 ARG A 39 VAL A 43 -1 O ARG A 39 N CYS A 33 SHEET 1 C 5 ARG B 15 PRO B 22 0 SHEET 2 C 5 GLU B 86 ARG B 93 -1 O ILE B 87 N ILE B 21 SHEET 3 C 5 THR B 59 LEU B 63 -1 N LEU B 61 O LEU B 90 SHEET 4 C 5 VAL B 38 VAL B 43 -1 N VAL B 38 O VAL B 60 SHEET 5 C 5 PHE B 30 CYS B 33 -1 N CYS B 33 O ARG B 39 SHEET 1 D 4 ARG B 15 PRO B 22 0 SHEET 2 D 4 GLU B 86 ARG B 93 -1 O ILE B 87 N ILE B 21 SHEET 3 D 4 THR B 59 LEU B 63 -1 N LEU B 61 O LEU B 90 SHEET 4 D 4 ARG B 66 PRO B 67 -1 O ARG B 66 N LEU B 63 SSBOND 1 CYS A 33 CYS B 34 1555 1555 2.03 SSBOND 2 CYS A 34 CYS B 33 1555 1555 2.04 SSBOND 3 CYS A 34 CYS B 34 1555 1555 2.73 CISPEP 1 SER A 36 PRO A 37 0 -0.18 CISPEP 2 SER B 36 PRO B 37 0 -1.41 CISPEP 3 MET B 94 VAL B 95 0 -4.97 SITE 1 AC1 7 GLY A 24 LYS A 25 PRO A 48 ARG A 51 SITE 2 AC1 7 GLY B 24 LYS B 25 ASP B 26 SITE 1 AC2 6 VAL A 74 ALA A 77 HIS A 78 ARG A 81 SITE 2 AC2 6 HOH A 122 LYS B 72 CRYST1 91.110 44.140 49.857 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010976 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020057 0.00000