HEADER GENE REGULATION 30-NOV-05 2F7C TITLE CATM EFFECTOR BINDING DOMAIN WITH ITS EFFECTOR CIS,CIS-MUCONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR CATM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAT OPERON TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAYLYI; SOURCE 3 ORGANISM_TAXID: 202950; SOURCE 4 STRAIN: ADP1; SOURCE 5 GENE: CATM, CATR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS LTTR, LYSR-TYPE TRANSCRIPTIONAL REGULATOR, INDUCER BINDING DOMAIN, KEYWDS 2 EFFECTOR BINDING DOMAIN, MUCONATE, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR T.CLARK,S.HADDAD,O.EZEZIKA,E.NEIDLE,C.MOMANY REVDAT 6 23-AUG-23 2F7C 1 REMARK SEQADV REVDAT 5 18-OCT-17 2F7C 1 REMARK REVDAT 4 13-JUL-11 2F7C 1 VERSN REVDAT 3 24-FEB-09 2F7C 1 VERSN REVDAT 2 20-MAR-07 2F7C 1 JRNL REVDAT 1 31-OCT-06 2F7C 0 JRNL AUTH O.C.EZEZIKA,S.HADDAD,T.J.CLARK,E.L.NEIDLE,C.MOMANY JRNL TITL DISTINCT EFFECTOR-BINDING SITES ENABLE SYNERGISTIC JRNL TITL 2 TRANSCRIPTIONAL ACTIVATION BY BENM, A LYSR-TYPE REGULATOR. JRNL REF J.MOL.BIOL. V. 367 616 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17291527 JRNL DOI 10.1016/J.JMB.2006.09.090 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.CLARK,S.HADDAD,E.NEIDLE,C.MOMANY REMARK 1 TITL CRYSTALLIZATION OF THE EFFECTOR-BINDING DOMAINS OF BENM AND REMARK 1 TITL 2 CATM, LYSR-TYPE TRANSCRIPTIONAL REGULATORS FROM REMARK 1 TITL 3 ACINETOBACTER SP. ADP1. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 105 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 12611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.952 REMARK 3 FREE R VALUE TEST SET COUNT : 657 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.22 REMARK 3 REFLECTION IN BIN (WORKING SET) : 809 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1700 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 44.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59700 REMARK 3 B22 (A**2) : 1.70300 REMARK 3 B33 (A**2) : -1.10600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.253 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.210 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.168 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.986 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1761 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1795 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2390 ; 1.159 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4091 ; 0.751 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 215 ; 5.663 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;36.658 ;24.324 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 315 ;12.130 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;21.112 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 281 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1949 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 385 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 339 ; 0.185 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1887 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 832 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1076 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 154 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.249 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 104 ; 0.221 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.147 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1413 ; 0.845 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 436 ; 0.089 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1765 ; 1.281 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1476 ; 0.551 ; 5.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 759 ; 2.650 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1552 ; 0.907 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 625 ; 3.447 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2615 ; 1.365 ;10.000 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 89 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 50.2180 18.0260 55.4720 REMARK 3 T TENSOR REMARK 3 T11: -0.0628 T22: 0.0402 REMARK 3 T33: -0.1760 T12: 0.0017 REMARK 3 T13: 0.0100 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 7.1307 L22: 3.5480 REMARK 3 L33: 2.0991 L12: 1.5183 REMARK 3 L13: 1.0914 L23: 2.1877 REMARK 3 S TENSOR REMARK 3 S11: -0.0871 S12: 0.2248 S13: -0.0036 REMARK 3 S21: -0.1487 S22: -0.0414 S23: 0.1176 REMARK 3 S31: -0.1368 S32: 0.0141 S33: 0.1286 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 40.1250 17.4130 50.2970 REMARK 3 T TENSOR REMARK 3 T11: -0.2450 T22: 0.2143 REMARK 3 T33: 0.0093 T12: 0.0048 REMARK 3 T13: -0.1291 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 9.8492 L22: 25.4231 REMARK 3 L33: 13.8922 L12: 5.6871 REMARK 3 L13: 5.7674 L23: 3.2004 REMARK 3 S TENSOR REMARK 3 S11: -0.3429 S12: 0.8940 S13: 0.1316 REMARK 3 S21: -0.9596 S22: -0.1474 S23: 0.4665 REMARK 3 S31: -0.5486 S32: 0.3688 S33: 0.4903 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): 52.6750 27.2190 62.1400 REMARK 3 T TENSOR REMARK 3 T11: -0.0720 T22: -0.0572 REMARK 3 T33: -0.0697 T12: 0.0248 REMARK 3 T13: -0.0354 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 4.5132 L22: 5.9942 REMARK 3 L33: 2.0939 L12: 0.3306 REMARK 3 L13: -1.4184 L23: 0.1830 REMARK 3 S TENSOR REMARK 3 S11: -0.0508 S12: -0.2895 S13: 0.6760 REMARK 3 S21: -0.2245 S22: -0.0759 S23: 0.0028 REMARK 3 S31: -0.2657 S32: 0.0426 S33: 0.1267 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 149 A 156 REMARK 3 ORIGIN FOR THE GROUP (A): 50.1690 27.0510 72.3770 REMARK 3 T TENSOR REMARK 3 T11: -0.0957 T22: 0.2015 REMARK 3 T33: -0.1019 T12: -0.0348 REMARK 3 T13: 0.0245 T23: -0.1153 REMARK 3 L TENSOR REMARK 3 L11: 5.1107 L22: 8.9593 REMARK 3 L33: 9.0554 L12: 0.9244 REMARK 3 L13: -0.1666 L23: 5.3735 REMARK 3 S TENSOR REMARK 3 S11: -0.1121 S12: -1.2207 S13: 0.2614 REMARK 3 S21: 0.4751 S22: -0.2142 S23: -0.0562 REMARK 3 S31: -0.4168 S32: 0.3903 S33: 0.3263 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): 54.9030 12.5670 69.3790 REMARK 3 T TENSOR REMARK 3 T11: -0.0610 T22: 0.0308 REMARK 3 T33: -0.1469 T12: -0.0273 REMARK 3 T13: 0.0272 T23: -0.0646 REMARK 3 L TENSOR REMARK 3 L11: 30.8723 L22: 5.5788 REMARK 3 L33: 8.7319 L12: -3.8275 REMARK 3 L13: -8.9790 L23: 0.2483 REMARK 3 S TENSOR REMARK 3 S11: -0.0514 S12: -1.4821 S13: -1.3956 REMARK 3 S21: 0.1079 S22: 0.1431 S23: 0.1481 REMARK 3 S31: 0.2840 S32: -0.1510 S33: -0.0917 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 164 A 175 REMARK 3 ORIGIN FOR THE GROUP (A): 78.3250 7.1720 62.6760 REMARK 3 T TENSOR REMARK 3 T11: -0.1044 T22: 0.0047 REMARK 3 T33: -0.1109 T12: -0.0091 REMARK 3 T13: -0.0429 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 10.0492 L22: 6.2290 REMARK 3 L33: 6.0422 L12: -1.1624 REMARK 3 L13: -4.2153 L23: 2.2920 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: 0.0044 S13: -0.2164 REMARK 3 S21: 0.0141 S22: 0.0630 S23: -0.4046 REMARK 3 S31: -0.0455 S32: 0.1506 S33: -0.0844 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 176 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 78.2220 8.0450 71.8340 REMARK 3 T TENSOR REMARK 3 T11: -0.0482 T22: 0.1018 REMARK 3 T33: -0.0960 T12: -0.0302 REMARK 3 T13: -0.0759 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 3.4086 L22: 11.8970 REMARK 3 L33: 4.3125 L12: 1.5896 REMARK 3 L13: -1.0496 L23: 6.1817 REMARK 3 S TENSOR REMARK 3 S11: -0.0569 S12: -0.6932 S13: -0.0888 REMARK 3 S21: 0.2676 S22: 0.0466 S23: -0.4676 REMARK 3 S31: 0.1545 S32: 0.3621 S33: 0.0103 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 73.4060 22.2720 63.9840 REMARK 3 T TENSOR REMARK 3 T11: -0.0305 T22: 0.0086 REMARK 3 T33: -0.1435 T12: -0.0367 REMARK 3 T13: 0.0019 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 10.2181 L22: 3.8908 REMARK 3 L33: 1.9205 L12: -3.8498 REMARK 3 L13: -0.8882 L23: -0.7820 REMARK 3 S TENSOR REMARK 3 S11: 0.1259 S12: -0.4042 S13: 0.1480 REMARK 3 S21: -0.2743 S22: -0.0301 S23: -0.1501 REMARK 3 S31: -0.0647 S32: 0.0874 S33: -0.0957 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 200 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): 71.9110 21.7000 72.2710 REMARK 3 T TENSOR REMARK 3 T11: -0.0684 T22: 0.1276 REMARK 3 T33: -0.0781 T12: -0.0301 REMARK 3 T13: -0.0050 T23: -0.1007 REMARK 3 L TENSOR REMARK 3 L11: 5.4784 L22: 1.3571 REMARK 3 L33: 5.8720 L12: -2.3582 REMARK 3 L13: 5.6548 L23: -2.3248 REMARK 3 S TENSOR REMARK 3 S11: -0.1752 S12: -0.4293 S13: 0.3781 REMARK 3 S21: 0.1131 S22: 0.1069 S23: -0.0689 REMARK 3 S31: -0.3382 S32: -0.1041 S33: 0.0683 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 221 A 237 REMARK 3 ORIGIN FOR THE GROUP (A): 73.3560 19.9650 57.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: 0.0643 REMARK 3 T33: -0.1040 T12: 0.0276 REMARK 3 T13: 0.0041 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.8365 L22: 3.0635 REMARK 3 L33: 5.0149 L12: 0.0137 REMARK 3 L13: -1.9928 L23: 0.8724 REMARK 3 S TENSOR REMARK 3 S11: 0.0273 S12: 0.0966 S13: 0.2897 REMARK 3 S21: -0.3298 S22: -0.0326 S23: -0.1521 REMARK 3 S31: -0.3501 S32: 0.1004 S33: 0.0053 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 238 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): 69.8450 12.3090 60.8180 REMARK 3 T TENSOR REMARK 3 T11: -0.0221 T22: 0.0076 REMARK 3 T33: -0.1314 T12: 0.0458 REMARK 3 T13: -0.0152 T23: 0.0825 REMARK 3 L TENSOR REMARK 3 L11: 19.4844 L22: 5.5924 REMARK 3 L33: 4.8199 L12: 5.7705 REMARK 3 L13: -1.8791 L23: 3.6878 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: 0.1541 S13: 0.0408 REMARK 3 S21: -0.2361 S22: -0.0015 S23: -0.0478 REMARK 3 S31: -0.0953 S32: -0.1635 S33: 0.0242 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 251 A 266 REMARK 3 ORIGIN FOR THE GROUP (A): 71.1290 8.0330 64.5900 REMARK 3 T TENSOR REMARK 3 T11: -0.0857 T22: 0.0959 REMARK 3 T33: -0.1390 T12: -0.0575 REMARK 3 T13: -0.0111 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 1.7858 L22: 2.8423 REMARK 3 L33: 5.8343 L12: 0.4183 REMARK 3 L13: -2.1305 L23: -2.3053 REMARK 3 S TENSOR REMARK 3 S11: -0.0550 S12: -0.0168 S13: -0.0483 REMARK 3 S21: 0.1981 S22: -0.1485 S23: -0.0738 REMARK 3 S31: 0.4406 S32: -0.4222 S33: 0.2035 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 267 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 43.8580 20.7690 64.8280 REMARK 3 T TENSOR REMARK 3 T11: -0.1233 T22: 0.1021 REMARK 3 T33: -0.0862 T12: 0.0425 REMARK 3 T13: 0.0718 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 2.1937 L22: 3.7071 REMARK 3 L33: 3.8195 L12: -1.4275 REMARK 3 L13: 2.5069 L23: -0.1554 REMARK 3 S TENSOR REMARK 3 S11: -0.0729 S12: -0.4267 S13: 0.0731 REMARK 3 S21: 0.0100 S22: -0.0787 S23: 0.2874 REMARK 3 S31: -0.2828 S32: -0.4325 S33: 0.1516 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 290 A 304 REMARK 3 ORIGIN FOR THE GROUP (A): 47.6140 6.4910 65.9770 REMARK 3 T TENSOR REMARK 3 T11: 0.0039 T22: 0.0555 REMARK 3 T33: -0.0547 T12: -0.0106 REMARK 3 T13: 0.1305 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 4.2206 L22: 14.9131 REMARK 3 L33: 1.1510 L12: -0.9941 REMARK 3 L13: 2.1213 L23: -1.6159 REMARK 3 S TENSOR REMARK 3 S11: -0.1035 S12: -0.2633 S13: -0.0168 REMARK 3 S21: 0.8898 S22: 0.0711 S23: 1.2481 REMARK 3 S31: 0.1383 S32: -0.4376 S33: 0.0324 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F7C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035541. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13349 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 59.549 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.53700 REMARK 200 R SYM FOR SHELL (I) : 0.53700 REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2F7B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULFATE, SODIUM REMARK 280 ACETATE, NACL, TRIS, GLYCEROL, IMIDAZOLE, MICROBATCH UNDER OIL, REMARK 280 TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.78400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.55400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.31350 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.78400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.55400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.31350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.78400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.55400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.31350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.78400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 36.55400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.31350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT (EFFECTOR BINDING DOMAIN) IS A DIMER REMARK 300 GENERATED FROM THE MONOMER IN THE ASYMMETRIC UNIT BY THE OPERATION, REMARK 300 1-X, Y, -Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 131.13600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 102.62700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 428 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 81 REMARK 465 ALA A 82 REMARK 465 LYS A 83 REMARK 465 ARG A 84 REMARK 465 ILE A 85 REMARK 465 ALA A 86 REMARK 465 THR A 87 REMARK 465 VAL A 88 REMARK 465 ILE A 305 REMARK 465 LEU A 306 REMARK 465 GLU A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CCU A 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F6G RELATED DB: PDB REMARK 900 RELATED ID: 2F6P RELATED DB: PDB REMARK 900 RELATED ID: 2F78 RELATED DB: PDB REMARK 900 RELATED ID: 2F7A RELATED DB: PDB REMARK 900 RELATED ID: 2F7B RELATED DB: PDB REMARK 900 RELATED ID: 2F8D RELATED DB: PDB REMARK 900 RELATED ID: 2F97 RELATED DB: PDB DBREF 2F7C A 81 303 UNP P07774 CATM_ACIAD 81 303 SEQADV 2F7C PRO A 174 UNP P07774 LEU 174 CLONING ARTIFACT SEQADV 2F7C SER A 304 UNP P07774 CLONING ARTIFACT SEQADV 2F7C ILE A 305 UNP P07774 CLONING ARTIFACT SEQADV 2F7C LEU A 306 UNP P07774 CLONING ARTIFACT SEQADV 2F7C GLU A 307 UNP P07774 CLONING ARTIFACT SEQADV 2F7C HIS A 308 UNP P07774 EXPRESSION TAG SEQADV 2F7C HIS A 309 UNP P07774 EXPRESSION TAG SEQADV 2F7C HIS A 310 UNP P07774 EXPRESSION TAG SEQADV 2F7C HIS A 311 UNP P07774 EXPRESSION TAG SEQADV 2F7C HIS A 312 UNP P07774 EXPRESSION TAG SEQADV 2F7C HIS A 313 UNP P07774 EXPRESSION TAG SEQRES 1 A 233 MET ALA LYS ARG ILE ALA THR VAL SER GLN THR LEU ARG SEQRES 2 A 233 ILE GLY TYR VAL SER SER LEU LEU TYR GLY LEU LEU PRO SEQRES 3 A 233 GLU ILE ILE TYR LEU PHE ARG GLN GLN ASN PRO GLU ILE SEQRES 4 A 233 HIS ILE GLU LEU ILE GLU CYS GLY THR LYS ASP GLN ILE SEQRES 5 A 233 ASN ALA LEU LYS GLN GLY LYS ILE ASP LEU GLY PHE GLY SEQRES 6 A 233 ARG LEU LYS ILE THR ASP PRO ALA ILE ARG ARG ILE VAL SEQRES 7 A 233 LEU HIS LYS GLU GLN LEU LYS LEU ALA ILE HIS LYS HIS SEQRES 8 A 233 HIS HIS PRO ASN GLN PHE ALA ALA THR GLY VAL HIS LEU SEQRES 9 A 233 SER GLN ILE ILE ASP GLU PRO MET LEU LEU TYR PRO VAL SEQRES 10 A 233 SER GLN LYS PRO ASN PHE ALA THR PHE ILE GLN SER LEU SEQRES 11 A 233 PHE THR GLU LEU GLY LEU VAL PRO SER LYS LEU THR GLU SEQRES 12 A 233 ILE ARG GLU ILE GLN LEU ALA LEU GLY LEU VAL ALA ALA SEQRES 13 A 233 GLY GLU GLY VAL CYS ILE VAL PRO ALA SER ALA MET ASP SEQRES 14 A 233 ILE GLY VAL LYS ASN LEU LEU TYR ILE PRO ILE LEU ASP SEQRES 15 A 233 ASP ASP ALA TYR SER PRO ILE SER LEU ALA VAL ARG ASN SEQRES 16 A 233 MET ASP HIS SER ASN TYR ILE PRO LYS ILE LEU ALA CYS SEQRES 17 A 233 VAL GLN GLU VAL PHE ALA THR HIS HIS ILE ARG PRO LEU SEQRES 18 A 233 ILE GLU SER ILE LEU GLU HIS HIS HIS HIS HIS HIS HET SO4 A 1 5 HET CCU A 2 10 HETNAM SO4 SULFATE ION HETNAM CCU (2Z,4Z)-HEXA-2,4-DIENEDIOIC ACID HETSYN CCU CIS,CIS-MUCONIC ACID FORMUL 2 SO4 O4 S 2- FORMUL 3 CCU C6 H6 O4 FORMUL 4 HOH *202(H2 O) HELIX 1 1 SER A 98 GLY A 103 5 6 HELIX 2 2 LEU A 104 ASN A 116 1 13 HELIX 3 3 GLY A 127 GLN A 137 1 11 HELIX 4 4 HIS A 183 ILE A 188 5 6 HELIX 5 5 ASN A 202 GLU A 213 1 12 HELIX 6 6 GLU A 226 GLY A 237 1 12 HELIX 7 7 SER A 246 ILE A 250 5 5 HELIX 8 8 ASN A 280 HIS A 296 1 17 SHEET 1 A 8 HIS A 120 GLU A 125 0 SHEET 2 A 8 THR A 91 TYR A 96 1 N ILE A 94 O ILE A 124 SHEET 3 A 8 LEU A 142 GLY A 145 1 O PHE A 144 N GLY A 95 SHEET 4 A 8 TYR A 266 ARG A 274 -1 O ALA A 272 N GLY A 143 SHEET 5 A 8 ILE A 154 HIS A 169 -1 N ARG A 155 O VAL A 273 SHEET 6 A 8 VAL A 240 PRO A 244 -1 O CYS A 241 N ALA A 167 SHEET 7 A 8 PRO A 191 LEU A 194 1 N LEU A 193 O VAL A 240 SHEET 8 A 8 LYS A 220 GLU A 223 1 O THR A 222 N LEU A 194 SHEET 1 B 6 HIS A 120 GLU A 125 0 SHEET 2 B 6 THR A 91 TYR A 96 1 N ILE A 94 O ILE A 124 SHEET 3 B 6 LEU A 142 GLY A 145 1 O PHE A 144 N GLY A 95 SHEET 4 B 6 TYR A 266 ARG A 274 -1 O ALA A 272 N GLY A 143 SHEET 5 B 6 ILE A 154 HIS A 169 -1 N ARG A 155 O VAL A 273 SHEET 6 B 6 LEU A 255 PRO A 259 -1 O ILE A 258 N LEU A 166 CISPEP 1 TYR A 195 PRO A 196 0 -8.31 CISPEP 2 LYS A 200 PRO A 201 0 -2.94 SITE 1 AC1 4 HIS A 173 PRO A 174 ASN A 175 GLN A 176 SITE 1 AC2 12 VAL A 97 SER A 99 THR A 128 ARG A 146 SITE 2 AC2 12 LEU A 147 PRO A 196 ASN A 202 PHE A 203 SITE 3 AC2 12 HOH A 324 HOH A 327 HOH A 329 HOH A 342 CRYST1 65.568 73.108 102.627 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009740 0.00000