HEADER TRANSFERASE 30-NOV-05 2F7F TITLE CRYSTAL STRUCTURE OF ENTEROCOCCUS FAECALIS PUTATIVE NICOTINATE TITLE 2 PHOSPHORIBOSYLTRANSFERASE, NEW YORK STRUCTURAL GENOMICS CONSORTIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICOTINATE PHOSPHORIBOSYLTRANSFERASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.2.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: V583; SOURCE 5 GENE: EF2626; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRANSFERASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,S.C.ALMO,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 23-AUG-23 2F7F 1 REMARK REVDAT 4 03-FEB-21 2F7F 1 AUTHOR REMARK SEQADV REVDAT 3 13-JUL-11 2F7F 1 VERSN REVDAT 2 24-FEB-09 2F7F 1 VERSN REVDAT 1 13-DEC-05 2F7F 0 JRNL AUTH Y.PATSKOVSKY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF ENTEROCOCCUS FAECALIS NICOTINATE JRNL TITL 2 PHOSPHORIBOSYLTRANSFERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 40207 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1308 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2925 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3884 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 73 REMARK 3 SOLVENT ATOMS : 390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 1.63000 REMARK 3 B33 (A**2) : -1.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.821 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4107 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5581 ; 1.365 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 502 ; 8.120 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 208 ;36.703 ;24.663 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 713 ;14.936 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;24.085 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 601 ; 0.226 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3133 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1878 ; 0.185 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2800 ; 0.309 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 578 ; 0.202 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 143 ; 0.158 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 65 ; 0.223 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2511 ; 1.164 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3939 ; 1.763 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1823 ; 1.207 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1632 ; 1.868 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F7F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035544. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41577 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : 0.06600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : 0.66000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1YTD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, 2 M AMMONIUM SULFATE, REMARK 280 10% GLYCEROL, PH 7.50, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.66250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.31350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.09450 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.66250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.31350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 77.09450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.66250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.31350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.09450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.66250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.31350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.09450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HOMODIMER. THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS REMARK 300 GENERATED BY THE TWO FOLD AXIS: -X, -Y, Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 71.32500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 110.62700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 945 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 TYR A 3 REMARK 465 LEU A 486 REMARK 465 THR A 487 REMARK 465 GLU A 488 REMARK 465 THR A 489 REMARK 465 VAL A 490 REMARK 465 ASN A 491 REMARK 465 LYS A 492 REMARK 465 GLU A 493 REMARK 465 ALA A 494 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 167 -177.15 70.80 REMARK 500 THR A 202 -116.96 -127.40 REMARK 500 ASP A 236 113.35 -167.21 REMARK 500 PHE A 284 65.88 -105.97 REMARK 500 SER A 292 -11.36 -144.63 REMARK 500 LYS A 309 64.43 -107.26 REMARK 500 GLN A 325 76.76 -156.19 REMARK 500 PRO A 326 20.08 -77.15 REMARK 500 ASN A 353 101.93 -43.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NIO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NIO A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DPO A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1949 RELATED DB: TARGETDB DBREF 2F7F A 1 494 UNP Q830Y8 Q830Y8_ENTFA 1 494 SEQADV 2F7F HIS A 448 UNP Q830Y8 TRP 448 CLONING ARTIFACT SEQRES 1 A 494 MET ASP TYR THR TYR ALA ASP ASP SER LEU THR LEU HIS SEQRES 2 A 494 THR ASP MET TYR GLN ILE ASN MET MET GLN THR TYR TRP SEQRES 3 A 494 GLU LEU GLY ARG ALA ASP LEU HIS ALA VAL PHE GLU CYS SEQRES 4 A 494 TYR PHE ARG GLU MET PRO PHE ASN HIS GLY TYR ALA ILE SEQRES 5 A 494 PHE ALA GLY LEU GLU ARG LEU VAL ASN TYR LEU GLU ASN SEQRES 6 A 494 LEU THR PHE THR GLU SER ASP ILE ALA TYR LEU ARG GLU SEQRES 7 A 494 VAL GLU GLU TYR PRO GLU ASP PHE LEU THR TYR LEU ALA SEQRES 8 A 494 ASN PHE GLU PHE LYS CYS THR VAL ARG SER ALA LEU GLU SEQRES 9 A 494 GLY ASP LEU VAL PHE ASN ASN GLU PRO LEU ILE GLN ILE SEQRES 10 A 494 GLU GLY PRO LEU ALA GLN CYS GLN LEU VAL GLU THR ALA SEQRES 11 A 494 LEU LEU ASN MET VAL ASN PHE GLN THR LEU ILE ALA THR SEQRES 12 A 494 LYS ALA ALA ARG ILE LYS SER VAL ILE GLY ASP ASP PRO SEQRES 13 A 494 LEU LEU GLU PHE GLY THR ARG ARG ALA GLN GLU LEU ASP SEQRES 14 A 494 ALA ALA ILE TRP GLY THR ARG ALA ALA TYR ILE GLY GLY SEQRES 15 A 494 ALA ASP ALA THR SER ASN VAL ARG ALA GLY LYS ILE PHE SEQRES 16 A 494 GLY ILE PRO VAL SER GLY THR HIS ALA HIS SER LEU VAL SEQRES 17 A 494 GLN SER TYR GLY ASN ASP TYR GLU ALA PHE MET ALA TYR SEQRES 18 A 494 ALA LYS THR HIS ARG ASP CYS VAL PHE LEU VAL ASP THR SEQRES 19 A 494 TYR ASP THR LEU LYS ALA GLY VAL PRO SER ALA ILE ARG SEQRES 20 A 494 VAL ALA ARG GLU MET GLY ASP LYS ILE ASN PHE LEU GLY SEQRES 21 A 494 VAL ARG ILE ASP SER GLY ASP MET ALA TYR ILE SER LYS SEQRES 22 A 494 ARG VAL ARG GLU GLN LEU ASP GLU ALA GLY PHE THR GLU SEQRES 23 A 494 ALA LYS ILE TYR ALA SER ASN ASP LEU ASP GLU ASN THR SEQRES 24 A 494 ILE LEU ASN LEU LYS MET GLN LYS SER LYS ILE ASP VAL SEQRES 25 A 494 TRP GLY VAL GLY THR LYS LEU ILE THR ALA TYR ASP GLN SEQRES 26 A 494 PRO ALA LEU GLY ALA VAL PHE LYS LEU VAL SER ILE GLU SEQRES 27 A 494 GLY GLU ASP GLY GLN MET LYS ASP THR ILE LYS LEU SER SEQRES 28 A 494 SER ASN ALA GLU LYS VAL THR THR PRO GLY LYS LYS GLN SEQRES 29 A 494 VAL TRP ARG ILE THR ARG LYS SER ASP LYS LYS SER GLU SEQRES 30 A 494 GLY ASP TYR VAL THR LEU TRP ASN GLU ASP PRO ARG GLN SEQRES 31 A 494 GLU GLU GLU ILE TYR MET PHE HIS PRO VAL HIS THR PHE SEQRES 32 A 494 ILE ASN LYS TYR VAL ARG ASP PHE GLU ALA ARG PRO VAL SEQRES 33 A 494 LEU GLN ASP ILE PHE VAL GLU GLY LYS ARG VAL TYR GLU SEQRES 34 A 494 LEU PRO THR LEU ASP GLU ILE LYS GLN TYR ALA LYS GLU SEQRES 35 A 494 ASN LEU ASP SER LEU HIS GLU GLU TYR LYS ARG ASP LEU SEQRES 36 A 494 ASN PRO GLN LYS TYR PRO VAL ASP LEU SER THR ASP CYS SEQRES 37 A 494 TRP ASN HIS LYS MET ASN LEU LEU GLU LYS VAL ARG LYS SEQRES 38 A 494 ASP VAL LYS HIS LEU THR GLU THR VAL ASN LYS GLU ALA HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 507 5 HET SO4 A 510 5 HET SO4 A 511 5 HET NIO A 601 9 HET NIO A 602 9 HET DPO A 701 9 HET GOL A 801 6 HETNAM SO4 SULFATE ION HETNAM NIO NICOTINIC ACID HETNAM DPO DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 8(O4 S 2-) FORMUL 10 NIO 2(C6 H5 N O2) FORMUL 12 DPO O7 P2 4- FORMUL 13 GOL C3 H8 O3 FORMUL 14 HOH *390(H2 O) HELIX 1 1 ASP A 15 LEU A 28 1 14 HELIX 2 2 MET A 44 HIS A 48 5 5 HELIX 3 3 GLY A 55 ASN A 65 1 11 HELIX 4 4 THR A 69 VAL A 79 1 11 HELIX 5 5 PRO A 83 ASN A 92 1 10 HELIX 6 6 LEU A 121 GLY A 153 1 33 HELIX 7 7 GLY A 161 ALA A 165 5 5 HELIX 8 8 GLU A 167 GLY A 182 1 16 HELIX 9 9 ASN A 188 GLY A 196 1 9 HELIX 10 10 ALA A 204 GLY A 212 1 9 HELIX 11 11 ASN A 213 HIS A 225 1 13 HELIX 12 12 ALA A 240 GLY A 253 1 14 HELIX 13 13 ASP A 254 ILE A 256 5 3 HELIX 14 14 ASP A 267 ALA A 282 1 16 HELIX 15 15 ASP A 296 GLN A 306 1 11 HELIX 16 16 GLY A 316 THR A 321 1 6 HELIX 17 17 ASP A 387 GLU A 391 5 5 HELIX 18 18 THR A 432 LEU A 447 1 16 HELIX 19 19 HIS A 448 ARG A 453 1 6 HELIX 20 20 SER A 465 VAL A 483 1 19 SHEET 1 A 7 MET A 344 ASP A 346 0 SHEET 2 A 7 VAL A 331 GLU A 338 -1 N ILE A 337 O LYS A 345 SHEET 3 A 7 HIS A 34 TYR A 40 -1 N VAL A 36 O SER A 336 SHEET 4 A 7 ILE A 115 PRO A 120 -1 O ILE A 115 N CYS A 39 SHEET 5 A 7 THR A 98 SER A 101 -1 N THR A 98 O GLU A 118 SHEET 6 A 7 GLN A 418 VAL A 422 -1 O GLN A 418 N SER A 101 SHEET 7 A 7 LYS A 425 ARG A 426 -1 O LYS A 425 N VAL A 422 SHEET 1 B 2 ALA A 51 ILE A 52 0 SHEET 2 B 2 LEU A 107 VAL A 108 -1 O VAL A 108 N ALA A 51 SHEET 1 C 6 ALA A 185 THR A 186 0 SHEET 2 C 6 LEU A 157 GLU A 159 1 N GLU A 159 O ALA A 185 SHEET 3 C 6 VAL A 312 VAL A 315 1 O TRP A 313 N LEU A 158 SHEET 4 C 6 LYS A 288 ALA A 291 1 N ALA A 291 O GLY A 314 SHEET 5 C 6 ASN A 257 ILE A 263 1 N VAL A 261 O TYR A 290 SHEET 6 C 6 ASP A 227 LEU A 231 1 N CYS A 228 O ASN A 257 SHEET 1 D 4 PHE A 411 PRO A 415 0 SHEET 2 D 4 LYS A 363 ARG A 370 -1 N ARG A 367 O ARG A 414 SHEET 3 D 4 SER A 376 LEU A 383 -1 O TYR A 380 N TRP A 366 SHEET 4 D 4 VAL A 462 LEU A 464 1 O ASP A 463 N VAL A 381 SHEET 1 E 2 GLU A 393 PHE A 397 0 SHEET 2 E 2 ASN A 405 ARG A 409 -1 O LYS A 406 N MET A 396 CISPEP 1 THR A 4 TYR A 5 0 -29.99 SITE 1 AC1 3 THR A 69 GLU A 70 HOH A 856 SITE 1 AC2 6 ASN A 293 ASP A 294 GLY A 316 THR A 317 SITE 2 AC2 6 HOH A 835 HOH A1034 SITE 1 AC3 5 HIS A 225 ARG A 226 ASP A 227 HOH A 847 SITE 2 AC3 5 HOH A1059 SITE 1 AC4 2 ARG A 226 ASN A 257 SITE 1 AC5 9 ARG A 276 THR A 285 GLU A 286 ALA A 287 SITE 2 AC5 9 LYS A 288 ASP A 311 SER A 372 HOH A 914 SITE 3 AC5 9 HOH A1175 SITE 1 AC6 4 ILE A 194 PHE A 195 SO4 A 510 HOH A1121 SITE 1 AC7 3 ALA A 6 ASP A 7 SO4 A 507 SITE 1 AC8 3 ARG A 426 GLU A 429 LEU A 430 SITE 1 AC9 8 ASP A 15 TYR A 17 PHE A 160 ARG A 163 SITE 2 AC9 8 GLY A 201 THR A 202 ARG A 262 HOH A 809 SITE 1 BC1 8 MET A 396 HIS A 398 ILE A 404 LYS A 406 SITE 2 BC1 8 PRO A 461 ASP A 463 HOH A 865 HOH A1168 SITE 1 BC2 11 TYR A 17 ARG A 163 ALA A 204 HIS A 205 SITE 2 BC2 11 SER A 206 ARG A 262 ASP A 264 PHE A 332 SITE 3 BC2 11 LYS A 333 HOH A 818 HOH A 875 SITE 1 BC3 7 GLU A 38 TYR A 40 GLU A 112 PRO A 113 SITE 2 BC3 7 THR A 359 LYS A 363 HOH A 976 CRYST1 71.325 110.627 154.189 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014020 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009039 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006486 0.00000