HEADER RNA 13-DEC-05 2FCZ TITLE HIV-1 DIS KISSING-LOOP IN COMPLEX WITH RIBOSTAMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 DIS RNA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN SUBTYPE F HIV-1 KEYWDS HIV-1, RNA, AMINOGLYCOSIDE, ANTIBIOTICS EXPDTA X-RAY DIFFRACTION AUTHOR E.ENNIFAR,J.C.PAILLART,R.MARQUET,P.DUMAS REVDAT 3 30-AUG-23 2FCZ 1 REMARK HETSYN LINK REVDAT 2 24-FEB-09 2FCZ 1 VERSN REVDAT 1 16-MAY-06 2FCZ 0 JRNL AUTH E.ENNIFAR,J.C.PAILLART,A.BODLENNER,P.WALTER,J.-M.WEIBEL, JRNL AUTH 2 A.-M.AUBERTIN,P.PALE,P.DUMAS,R.MARQUET JRNL TITL TARGETING THE DIMERIZATION INITIATION SITE OF HIV-1 RNA WITH JRNL TITL 2 AMINOGLYCOSIDES: FROM CRYSTAL TO CELL. JRNL REF NUCLEIC ACIDS RES. V. 34 2328 2006 JRNL REFN ISSN 0305-1048 JRNL PMID 16679451 JRNL DOI 10.1093/NAR/GKL317 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 993174.670 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 18763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1471 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2604 REMARK 3 BIN R VALUE (WORKING SET) : 0.3230 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 8.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 244 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 1960 REMARK 3 HETEROGEN ATOMS : 128 REMARK 3 SOLVENT ATOMS : 209 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.94000 REMARK 3 B22 (A**2) : 1.15000 REMARK 3 B33 (A**2) : 1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.82000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.34 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 13.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.370 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 40.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : BRU_REP.PARAM REMARK 3 PARAMETER FILE 5 : RIBOSTAMYCINE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : WATER.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : BRU.TOP REMARK 3 TOPOLOGY FILE 5 : RIBOSTAMYCINE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FCZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000035730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18764 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 18.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25600 REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 2FCX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, KCL, MGCL2, NA CACODYLATE PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 310K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.06250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 13.59550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.06250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 13.59550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMETRIC UNIT CONTAINS TWO BIOLOGICAL UNITS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G D 7 C5' - C4' - O4' ANGL. DEV. = -7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 26 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 8 OP1 REMARK 620 2 A A 9 OP2 90.9 REMARK 620 3 HOH A 98 O 78.3 85.6 REMARK 620 4 HOH A 111 O 121.2 64.7 143.1 REMARK 620 5 RIO A1024 O7 69.3 115.5 140.9 74.9 REMARK 620 6 HOH B 122 O 126.8 140.5 110.8 83.4 74.5 REMARK 620 7 HOH B 222 O 147.4 105.5 75.2 91.3 124.1 50.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 25 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A B 8 OP1 REMARK 620 2 A B 9 OP2 87.2 REMARK 620 3 HOH B 79 O 63.1 149.5 REMARK 620 4 HOH B 81 O 121.9 57.3 132.0 REMARK 620 5 HOH B 146 O 123.4 124.1 72.8 66.8 REMARK 620 6 HOH B 166 O 94.4 113.9 77.4 139.8 109.2 REMARK 620 7 RIO B2024 O7 69.7 98.1 66.4 71.9 60.8 143.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 27 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A C 8 OP1 REMARK 620 2 A C 9 OP2 98.8 REMARK 620 3 HOH C 119 O 143.0 64.4 REMARK 620 4 HOH C 228 O 53.2 151.2 132.5 REMARK 620 5 RIO C3024 O7 81.0 111.2 76.0 62.6 REMARK 620 6 HOH D 221 O 118.1 140.7 77.5 65.3 65.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 28 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A D 8 OP1 REMARK 620 2 A D 9 OP2 89.8 REMARK 620 3 HOH D 89 O 123.8 53.8 REMARK 620 4 HOH D 103 O 119.2 128.8 75.1 REMARK 620 5 RIO D4024 O7 63.9 100.4 80.8 64.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 25 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 26 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 27 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K D 28 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIO A 1024 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIO B 2024 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIO C 3024 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIO D 4024 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FCX RELATED DB: PDB REMARK 900 HIV-1 DIS KISSING-LOOP IN COMPLEX WITH NEAMINE REMARK 900 RELATED ID: 2FCY RELATED DB: PDB REMARK 900 HIV-1 DIS KISSING-LOOP IN COMPLEX WITH NEOMYCIN REMARK 900 RELATED ID: 1XP7 RELATED DB: PDB REMARK 900 SUBTYPE F HIV-1 DIS KISSING-LOOP REMARK 900 RELATED ID: 1Y3S RELATED DB: PDB REMARK 900 SUBTYPE F HIV-1 DIS KISSING-LOOP REMARK 900 RELATED ID: 2FD0 RELATED DB: PDB REMARK 900 HIV-1 DIS KISSING-LOOP IN COMPLEX WITH LIVIDOMYCIN DBREF 2FCZ A 1 23 PDB 2FCZ 2FCZ 1 23 DBREF 2FCZ B 1 23 PDB 2FCZ 2FCZ 1 23 DBREF 2FCZ C 1 23 PDB 2FCZ 2FCZ 1 23 DBREF 2FCZ D 1 23 PDB 2FCZ 2FCZ 1 23 SEQRES 1 A 23 C U 5BU G C U G A A G U G C SEQRES 2 A 23 A C A C A G C A A G SEQRES 1 B 23 C U 5BU G C U G A A G U G C SEQRES 2 B 23 A C A C A G C A A G SEQRES 1 C 23 C U 5BU G C U G A A G U G C SEQRES 2 C 23 A C A C A G C A A G SEQRES 1 D 23 C U 5BU G C U G A A G U G C SEQRES 2 D 23 A C A C A G C A A G MODRES 2FCZ 5BU A 3 U 5-BROMO-URIDINE-5'-MONOPHOSPHATE MODRES 2FCZ 5BU B 3 U 5-BROMO-URIDINE-5'-MONOPHOSPHATE MODRES 2FCZ 5BU C 3 U 5-BROMO-URIDINE-5'-MONOPHOSPHATE MODRES 2FCZ 5BU D 3 U 5-BROMO-URIDINE-5'-MONOPHOSPHATE HET 5BU A 3 21 HET 5BU B 3 21 HET 5BU C 3 21 HET 5BU D 3 21 HET K A 26 1 HET RIO A1024 31 HET K B 25 1 HET RIO B2024 31 HET K C 27 1 HET RIO C3024 31 HET K D 28 1 HET RIO D4024 31 HETNAM 5BU 5-BROMO-URIDINE-5'-MONOPHOSPHATE HETNAM K POTASSIUM ION HETNAM RIO RIBOSTAMYCIN HETSYN RIO 5-AMINO-2-AMINOMETHYL-6-[4,6-DIAMINO-2-(3,4-DIHYDROXY- HETSYN 2 RIO 5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-3-HYDROXY- HETSYN 3 RIO CYCLOHEXYLOXY ]-TETRAHYDRO-PYRAN-3,4-DIOL; (1R,2R,3S, HETSYN 4 RIO 4R,6S)-4,6-DIAMINO-3-HYDROXY-2-(BETA-D- HETSYN 5 RIO RIBOFURANOSYLOXY)CYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY- HETSYN 6 RIO ALPHA-D-GLUCOPYRANOSIDE FORMUL 1 5BU 4(C9 H12 BR N2 O9 P) FORMUL 5 K 4(K 1+) FORMUL 6 RIO 4(C17 H34 N4 O10) FORMUL 13 HOH *209(H2 O) LINK O3' U A 2 P 5BU A 3 1555 1555 1.61 LINK O3' 5BU A 3 P G A 4 1555 1555 1.61 LINK O3' U B 2 P 5BU B 3 1555 1555 1.60 LINK O3' 5BU B 3 P G B 4 1555 1555 1.60 LINK O3' U C 2 P 5BU C 3 1555 1555 1.60 LINK O3' 5BU C 3 P G C 4 1555 1555 1.60 LINK O3' U D 2 P 5BU D 3 1555 1555 1.60 LINK O3' 5BU D 3 P G D 4 1555 1555 1.61 LINK OP1 A A 8 K K A 26 1555 1555 2.53 LINK OP2 A A 9 K K A 26 1555 1555 2.72 LINK K K A 26 O HOH A 98 1555 1555 3.25 LINK K K A 26 O HOH A 111 1555 1555 3.12 LINK K K A 26 O7 RIO A1024 1555 1555 2.88 LINK K K A 26 O HOH B 122 1555 1555 3.37 LINK K K A 26 O HOH B 222 1555 1555 3.47 LINK OP1 A B 8 K K B 25 1555 1555 2.63 LINK OP2 A B 9 K K B 25 1555 1555 2.73 LINK K K B 25 O HOH B 79 1555 1555 2.77 LINK K K B 25 O HOH B 81 1555 1555 3.15 LINK K K B 25 O HOH B 146 1555 1555 2.96 LINK K K B 25 O HOH B 166 1555 1555 2.83 LINK K K B 25 O7 RIO B2024 1555 1555 3.15 LINK OP1 A C 8 K K C 27 1555 1555 2.71 LINK OP2 A C 9 K K C 27 1555 1555 2.55 LINK K K C 27 O HOH C 119 1555 1555 3.09 LINK K K C 27 O HOH C 228 1555 1555 3.48 LINK K K C 27 O7 RIO C3024 1555 1555 3.06 LINK K K C 27 O HOH D 221 1555 1555 3.45 LINK OP1 A D 8 K K D 28 1555 1555 2.66 LINK OP2 A D 9 K K D 28 1555 1555 2.62 LINK K K D 28 O HOH D 89 1555 1555 3.00 LINK K K D 28 O HOH D 103 1555 1555 2.81 LINK K K D 28 O7 RIO D4024 1555 1555 3.17 SITE 1 AC1 6 A B 8 A B 9 HOH B 79 HOH B 146 SITE 2 AC1 6 HOH B 166 RIO B2024 SITE 1 AC2 3 A A 8 A A 9 RIO A1024 SITE 1 AC3 4 A C 8 A C 9 HOH C 119 RIO C3024 SITE 1 AC4 5 A D 8 A D 9 HOH D 89 HOH D 103 SITE 2 AC4 5 RIO D4024 SITE 1 AC5 21 G A 7 A A 8 C A 13 A A 14 SITE 2 AC5 21 C A 15 A A 16 K A 26 HOH A 40 SITE 3 AC5 21 HOH A 53 HOH A 68 HOH A 83 HOH A 85 SITE 4 AC5 21 HOH A 111 HOH A 149 HOH A 155 HOH A 157 SITE 5 AC5 21 HOH A 186 G B 10 U B 11 G B 12 SITE 6 AC5 21 HOH B 33 SITE 1 AC6 20 G A 10 U A 11 HOH A 39 HOH A 53 SITE 2 AC6 20 HOH A 186 G B 7 A B 8 A B 9 SITE 3 AC6 20 A B 14 C B 15 A B 16 K B 25 SITE 4 AC6 20 HOH B 31 HOH B 48 HOH B 61 HOH B 65 SITE 5 AC6 20 HOH B 81 HOH B 105 HOH B 146 HOH B 154 SITE 1 AC7 19 G C 7 A C 8 A C 9 C C 13 SITE 2 AC7 19 A C 14 C C 15 A C 16 K C 27 SITE 3 AC7 19 HOH C 32 HOH C 54 HOH C 64 HOH C 72 SITE 4 AC7 19 HOH C 73 HOH C 88 HOH C 119 G D 10 SITE 5 AC7 19 U D 11 HOH D 38 HOH D 117 SITE 1 AC8 17 G C 10 U C 11 HOH C 63 G D 7 SITE 2 AC8 17 A D 8 A D 9 A D 14 C D 15 SITE 3 AC8 17 A D 16 K D 28 HOH D 41 HOH D 60 SITE 4 AC8 17 HOH D 89 HOH D 101 HOH D 109 HOH D 117 SITE 5 AC8 17 HOH D 202 CRYST1 112.125 27.191 106.909 90.00 116.72 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008919 0.000000 0.004489 0.00000 SCALE2 0.000000 0.036777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010472 0.00000