HEADER DNA BINDING PROTEIN/DNA 13-DEC-05 2FDC TITLE STRUCTURAL BASIS OF DNA DAMAGE RECOGNITION AND PROCESSING BY UVRB: TITLE 2 CRYSTAL STRUCTURE OF A UVRB/DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(P*CP*GP*GP*CP*TP*CP*CP*AP*TP*CP*TP*CP*TP*AP*CP*CP*GP*C COMPND 3 P*AP*A)-3'; COMPND 4 CHAIN: C, D; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: UVRABC SYSTEM PROTEIN B; COMPND 8 CHAIN: A, B; COMPND 9 SYNONYM: UVRB PROTEIN, EXCINUCLEASE ABC SUBUNIT B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: BACILLUS CALDOTENAX; SOURCE 5 ORGANISM_TAXID: 1395; SOURCE 6 GENE: UVRB; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-DNA COMPLEX, UVRB, UVRC, UVRD, UVRA, NER, NUCLEOTIDE EXCISION KEYWDS 2 REPAIR, DNA REPAIR, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.J.TRUGLIO,C.KISKER REVDAT 6 14-FEB-24 2FDC 1 REMARK REVDAT 5 18-OCT-17 2FDC 1 REMARK REVDAT 4 13-JUL-11 2FDC 1 VERSN REVDAT 3 24-FEB-09 2FDC 1 VERSN REVDAT 2 13-JUN-06 2FDC 1 JRNL REVDAT 1 14-MAR-06 2FDC 0 JRNL AUTH J.J.TRUGLIO,E.KARAKAS,B.RHAU,H.WANG,M.J.DELLAVECCHIA, JRNL AUTH 2 B.VAN HOUTEN,C.KISKER JRNL TITL STRUCTURAL BASIS FOR DNA RECOGNITION AND PROCESSING BY UVRB. JRNL REF NAT.STRUCT.MOL.BIOL. V. 13 360 2006 JRNL REFN ISSN 1545-9993 JRNL PMID 16532007 JRNL DOI 10.1038/NSMB1072 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1580 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2048 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8803 REMARK 3 NUCLEIC ACID ATOMS : 343 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.97000 REMARK 3 B22 (A**2) : 1.97000 REMARK 3 B33 (A**2) : -2.95000 REMARK 3 B12 (A**2) : 0.98000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.476 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.320 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 41.024 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9372 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 8552 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12736 ; 1.370 ; 2.028 REMARK 3 BOND ANGLES OTHERS (DEGREES): 19847 ; 0.796 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1085 ; 4.078 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 455 ;34.248 ;23.363 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1633 ;16.420 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 97 ;14.052 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1429 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10122 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1841 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2379 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 9792 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4515 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 5714 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 234 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 3 ; 0.069 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.110 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 109 ; 0.189 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.149 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5725 ; 1.613 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2201 ; 0.229 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8812 ; 2.626 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4402 ; 1.255 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3924 ; 2.174 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 414 A 593 REMARK 3 ORIGIN FOR THE GROUP (A): 41.5030 40.6203 159.7176 REMARK 3 T TENSOR REMARK 3 T11: -0.1007 T22: -0.0270 REMARK 3 T33: -0.0960 T12: 0.1136 REMARK 3 T13: -0.0346 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 2.6991 L22: 1.7923 REMARK 3 L33: 1.4656 L12: -0.6213 REMARK 3 L13: 0.4849 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.0960 S12: -0.3232 S13: -0.3662 REMARK 3 S21: -0.2070 S22: -0.0348 S23: 0.0807 REMARK 3 S31: 0.2029 S32: 0.0986 S33: -0.0612 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 414 B 593 REMARK 3 ORIGIN FOR THE GROUP (A): 41.0969 40.2091 81.4207 REMARK 3 T TENSOR REMARK 3 T11: -0.0430 T22: -0.0867 REMARK 3 T33: -0.0298 T12: 0.1195 REMARK 3 T13: -0.0912 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.5250 L22: 1.0985 REMARK 3 L33: 1.7197 L12: -0.5903 REMARK 3 L13: 0.8650 L23: -0.4818 REMARK 3 S TENSOR REMARK 3 S11: 0.1970 S12: -0.0576 S13: -0.2113 REMARK 3 S21: -0.2122 S22: -0.0067 S23: 0.0316 REMARK 3 S31: 0.3523 S32: 0.0896 S33: -0.1903 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 90 REMARK 3 RESIDUE RANGE : A 117 A 159 REMARK 3 RESIDUE RANGE : A 320 A 413 REMARK 3 ORIGIN FOR THE GROUP (A): 58.6647 36.4918 133.5855 REMARK 3 T TENSOR REMARK 3 T11: 0.2120 T22: -0.1309 REMARK 3 T33: -0.1809 T12: 0.1928 REMARK 3 T13: 0.0854 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.2837 L22: 2.7928 REMARK 3 L33: 0.5454 L12: -2.1939 REMARK 3 L13: -0.6146 L23: 0.5466 REMARK 3 S TENSOR REMARK 3 S11: 0.5176 S12: 0.1188 S13: 0.0570 REMARK 3 S21: -0.6623 S22: -0.3785 S23: -0.1963 REMARK 3 S31: -0.3252 S32: -0.2273 S33: -0.1390 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 156 B 247 REMARK 3 ORIGIN FOR THE GROUP (A): 56.8273 18.6019 27.9459 REMARK 3 T TENSOR REMARK 3 T11: 0.1300 T22: 0.0977 REMARK 3 T33: -0.2343 T12: 0.0731 REMARK 3 T13: -0.0998 T23: -0.1877 REMARK 3 L TENSOR REMARK 3 L11: 2.5331 L22: 2.1024 REMARK 3 L33: 2.3452 L12: 0.6326 REMARK 3 L13: 0.1375 L23: -0.2717 REMARK 3 S TENSOR REMARK 3 S11: -0.1474 S12: 0.8519 S13: -0.1649 REMARK 3 S21: -0.2755 S22: -0.0001 S23: 0.0566 REMARK 3 S31: 0.1778 S32: -0.3225 S33: 0.1475 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 90 REMARK 3 RESIDUE RANGE : B 117 B 155 REMARK 3 RESIDUE RANGE : B 320 B 413 REMARK 3 ORIGIN FOR THE GROUP (A): 59.9615 36.1932 55.3648 REMARK 3 T TENSOR REMARK 3 T11: 0.0090 T22: -0.0910 REMARK 3 T33: -0.0872 T12: 0.1227 REMARK 3 T13: -0.0098 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.1912 L22: 1.7540 REMARK 3 L33: 0.4788 L12: -1.0076 REMARK 3 L13: -0.4078 L23: 0.2929 REMARK 3 S TENSOR REMARK 3 S11: 0.1165 S12: 0.0176 S13: 0.0016 REMARK 3 S21: -0.0988 S22: -0.0602 S23: -0.0042 REMARK 3 S31: -0.1543 S32: -0.1706 S33: -0.0563 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 243 A 319 REMARK 3 ORIGIN FOR THE GROUP (A): 79.9318 12.7035 129.9983 REMARK 3 T TENSOR REMARK 3 T11: 0.1100 T22: -0.1725 REMARK 3 T33: -0.0913 T12: 0.0781 REMARK 3 T13: 0.0601 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 2.2449 L22: 2.1070 REMARK 3 L33: 3.2081 L12: -1.7403 REMARK 3 L13: 1.7918 L23: -0.2283 REMARK 3 S TENSOR REMARK 3 S11: 0.3823 S12: -0.0015 S13: -0.0370 REMARK 3 S21: -0.4340 S22: -0.3690 S23: -0.2306 REMARK 3 S31: -0.0715 S32: -0.0797 S33: -0.0133 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 248 B 319 REMARK 3 ORIGIN FOR THE GROUP (A): 80.5703 9.8091 51.4056 REMARK 3 T TENSOR REMARK 3 T11: -0.0174 T22: -0.1514 REMARK 3 T33: -0.0347 T12: 0.0439 REMARK 3 T13: 0.0019 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 1.1635 L22: 2.3395 REMARK 3 L33: 2.7971 L12: -1.0221 REMARK 3 L13: 1.1769 L23: -1.4106 REMARK 3 S TENSOR REMARK 3 S11: 0.0346 S12: -0.0001 S13: -0.1312 REMARK 3 S21: -0.1393 S22: -0.0197 S23: -0.0226 REMARK 3 S31: 0.0357 S32: 0.0799 S33: -0.0149 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 5 REMARK 3 ORIGIN FOR THE GROUP (A): 64.3501 21.7704 71.6450 REMARK 3 T TENSOR REMARK 3 T11: -0.0253 T22: -0.0967 REMARK 3 T33: -0.0056 T12: 0.0475 REMARK 3 T13: 0.0663 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 4.0804 L22: 3.0227 REMARK 3 L33: 39.0402 L12: -2.3626 REMARK 3 L13: -6.0384 L23: 10.5541 REMARK 3 S TENSOR REMARK 3 S11: 0.8425 S12: 1.1900 S13: 0.4456 REMARK 3 S21: 2.0648 S22: -1.5813 S23: 0.7070 REMARK 3 S31: -0.1038 S32: 0.0145 S33: 0.7388 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 13 C 19 REMARK 3 RESIDUE RANGE : C 473 C 473 REMARK 3 ORIGIN FOR THE GROUP (A): 59.6112 21.0181 62.7406 REMARK 3 T TENSOR REMARK 3 T11: 0.0217 T22: -0.0965 REMARK 3 T33: -0.0100 T12: 0.0070 REMARK 3 T13: 0.0397 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 3.1487 L22: 1.6666 REMARK 3 L33: 9.3971 L12: -2.2884 REMARK 3 L13: -4.1462 L23: 3.1296 REMARK 3 S TENSOR REMARK 3 S11: -0.0791 S12: -0.1947 S13: -0.7152 REMARK 3 S21: 0.2947 S22: 0.0019 S23: 0.3223 REMARK 3 S31: -0.0200 S32: 0.1599 S33: 0.0772 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 15 D 19 REMARK 3 ORIGIN FOR THE GROUP (A): 63.3462 18.7971 137.0519 REMARK 3 T TENSOR REMARK 3 T11: -0.0253 T22: -0.1627 REMARK 3 T33: 0.0891 T12: 0.0028 REMARK 3 T13: 0.0266 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 11.8623 L22: 12.5431 REMARK 3 L33: 15.9109 L12: -11.9243 REMARK 3 L13: -11.9012 L23: 10.4768 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: 0.1594 S13: -1.4463 REMARK 3 S21: -0.2223 S22: -1.0951 S23: 1.1056 REMARK 3 S31: -0.2804 S32: 0.0160 S33: 1.0241 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FDC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000035741. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X26C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33350 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM MGCL2, 14% PEG3000, 80MM SODIUM REMARK 280 CITRATE PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.78000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.39000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.39000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 106.78000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE TWO MONOMERS IN REMARK 300 THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC C 6 REMARK 465 DC C 7 REMARK 465 DA C 8 REMARK 465 DT C 9 REMARK 465 DC C 10 REMARK 465 DT C 11 REMARK 465 DC C 12 REMARK 465 DA C 20 REMARK 465 DC D 1 REMARK 465 DG D 2 REMARK 465 DG D 3 REMARK 465 DC D 4 REMARK 465 DT D 5 REMARK 465 DC D 6 REMARK 465 DC D 7 REMARK 465 DA D 8 REMARK 465 DT D 9 REMARK 465 DC D 10 REMARK 465 DT D 11 REMARK 465 DC D 12 REMARK 465 DT D 13 REMARK 465 DA D 14 REMARK 465 DA D 20 REMARK 465 SER A 160 REMARK 465 LEU A 161 REMARK 465 ARG A 162 REMARK 465 VAL A 163 REMARK 465 GLY A 164 REMARK 465 MET A 165 REMARK 465 GLU A 166 REMARK 465 ILE A 167 REMARK 465 GLU A 168 REMARK 465 ARG A 169 REMARK 465 ASN A 170 REMARK 465 ALA A 171 REMARK 465 LEU A 172 REMARK 465 LEU A 173 REMARK 465 ARG A 174 REMARK 465 ARG A 175 REMARK 465 LEU A 176 REMARK 465 VAL A 177 REMARK 465 ASP A 178 REMARK 465 ILE A 179 REMARK 465 GLN A 180 REMARK 465 TYR A 181 REMARK 465 ASP A 182 REMARK 465 ARG A 183 REMARK 465 ASN A 184 REMARK 465 ASP A 185 REMARK 465 ILE A 186 REMARK 465 ASP A 187 REMARK 465 PHE A 188 REMARK 465 ARG A 189 REMARK 465 ARG A 190 REMARK 465 GLY A 191 REMARK 465 THR A 192 REMARK 465 PHE A 193 REMARK 465 ARG A 194 REMARK 465 VAL A 195 REMARK 465 ARG A 196 REMARK 465 GLY A 197 REMARK 465 ASP A 198 REMARK 465 VAL A 199 REMARK 465 VAL A 200 REMARK 465 GLU A 201 REMARK 465 ILE A 202 REMARK 465 PHE A 203 REMARK 465 PRO A 204 REMARK 465 ALA A 205 REMARK 465 SER A 206 REMARK 465 ARG A 207 REMARK 465 ASP A 208 REMARK 465 GLU A 209 REMARK 465 HIS A 210 REMARK 465 CYS A 211 REMARK 465 ILE A 212 REMARK 465 ARG A 213 REMARK 465 VAL A 214 REMARK 465 GLU A 215 REMARK 465 PHE A 216 REMARK 465 PHE A 217 REMARK 465 GLY A 218 REMARK 465 ASP A 219 REMARK 465 GLU A 220 REMARK 465 ILE A 221 REMARK 465 GLU A 222 REMARK 465 ARG A 223 REMARK 465 ILE A 224 REMARK 465 ARG A 225 REMARK 465 GLU A 226 REMARK 465 VAL A 227 REMARK 465 ASP A 228 REMARK 465 ALA A 229 REMARK 465 LEU A 230 REMARK 465 THR A 231 REMARK 465 GLY A 232 REMARK 465 GLU A 233 REMARK 465 VAL A 234 REMARK 465 LEU A 235 REMARK 465 GLY A 236 REMARK 465 GLU A 237 REMARK 465 ARG A 238 REMARK 465 GLU A 239 REMARK 465 HIS A 240 REMARK 465 VAL A 241 REMARK 465 ALA A 242 REMARK 465 SER A 477 REMARK 465 GLU A 478 REMARK 465 ILE A 479 REMARK 465 LYS A 480 REMARK 465 THR A 481 REMARK 465 LEU A 482 REMARK 465 VAL A 595 REMARK 465 ILE A 596 REMARK 465 ARG A 597 REMARK 465 ALA A 598 REMARK 465 THR A 599 REMARK 465 TYR A 600 REMARK 465 ALA A 601 REMARK 465 ALA A 602 REMARK 465 GLU A 603 REMARK 465 GLU A 604 REMARK 465 THR A 605 REMARK 465 GLU A 606 REMARK 465 MET A 607 REMARK 465 TYR A 608 REMARK 465 GLU A 609 REMARK 465 ALA A 610 REMARK 465 LYS A 611 REMARK 465 PRO A 612 REMARK 465 ALA A 613 REMARK 465 ALA A 614 REMARK 465 ALA A 615 REMARK 465 MET A 616 REMARK 465 THR A 617 REMARK 465 LYS A 618 REMARK 465 GLN A 619 REMARK 465 GLU A 620 REMARK 465 ARG A 621 REMARK 465 GLU A 622 REMARK 465 GLU A 623 REMARK 465 LEU A 624 REMARK 465 ILE A 625 REMARK 465 ARG A 626 REMARK 465 THR A 627 REMARK 465 LEU A 628 REMARK 465 GLU A 629 REMARK 465 ALA A 630 REMARK 465 GLU A 631 REMARK 465 MET A 632 REMARK 465 LYS A 633 REMARK 465 GLU A 634 REMARK 465 ALA A 635 REMARK 465 ALA A 636 REMARK 465 LYS A 637 REMARK 465 ALA A 638 REMARK 465 LEU A 639 REMARK 465 ASP A 640 REMARK 465 PHE A 641 REMARK 465 GLU A 642 REMARK 465 ARG A 643 REMARK 465 ALA A 644 REMARK 465 ALA A 645 REMARK 465 GLN A 646 REMARK 465 LEU A 647 REMARK 465 ARG A 648 REMARK 465 ASP A 649 REMARK 465 ILE A 650 REMARK 465 ILE A 651 REMARK 465 PHE A 652 REMARK 465 GLU A 653 REMARK 465 LEU A 654 REMARK 465 LYS A 655 REMARK 465 ALA A 656 REMARK 465 GLU A 657 REMARK 465 GLY A 658 REMARK 465 SER B 477 REMARK 465 GLU B 478 REMARK 465 ILE B 479 REMARK 465 LYS B 480 REMARK 465 THR B 481 REMARK 465 LEU B 482 REMARK 465 GLU B 483 REMARK 465 ARG B 484 REMARK 465 ASP B 594 REMARK 465 VAL B 595 REMARK 465 ILE B 596 REMARK 465 ARG B 597 REMARK 465 ALA B 598 REMARK 465 THR B 599 REMARK 465 TYR B 600 REMARK 465 ALA B 601 REMARK 465 ALA B 602 REMARK 465 GLU B 603 REMARK 465 GLU B 604 REMARK 465 THR B 605 REMARK 465 GLU B 606 REMARK 465 MET B 607 REMARK 465 TYR B 608 REMARK 465 GLU B 609 REMARK 465 ALA B 610 REMARK 465 LYS B 611 REMARK 465 PRO B 612 REMARK 465 ALA B 613 REMARK 465 ALA B 614 REMARK 465 ALA B 615 REMARK 465 MET B 616 REMARK 465 THR B 617 REMARK 465 LYS B 618 REMARK 465 GLN B 619 REMARK 465 GLU B 620 REMARK 465 ARG B 621 REMARK 465 GLU B 622 REMARK 465 GLU B 623 REMARK 465 LEU B 624 REMARK 465 ILE B 625 REMARK 465 ARG B 626 REMARK 465 THR B 627 REMARK 465 LEU B 628 REMARK 465 GLU B 629 REMARK 465 ALA B 630 REMARK 465 GLU B 631 REMARK 465 MET B 632 REMARK 465 LYS B 633 REMARK 465 GLU B 634 REMARK 465 ALA B 635 REMARK 465 ALA B 636 REMARK 465 LYS B 637 REMARK 465 ALA B 638 REMARK 465 LEU B 639 REMARK 465 ASP B 640 REMARK 465 PHE B 641 REMARK 465 GLU B 642 REMARK 465 ARG B 643 REMARK 465 ALA B 644 REMARK 465 ALA B 645 REMARK 465 GLN B 646 REMARK 465 LEU B 647 REMARK 465 ARG B 648 REMARK 465 ASP B 649 REMARK 465 ILE B 650 REMARK 465 ILE B 651 REMARK 465 PHE B 652 REMARK 465 GLU B 653 REMARK 465 LEU B 654 REMARK 465 LYS B 655 REMARK 465 ALA B 656 REMARK 465 GLU B 657 REMARK 465 GLY B 658 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C 3 O3' DG C 3 C3' -0.060 REMARK 500 DA C 14 O3' DA C 14 C3' -0.043 REMARK 500 DG C 17 O3' DG C 17 C3' -0.050 REMARK 500 DC C 18 O3' DC C 18 C3' -0.038 REMARK 500 DA C 19 C5' DA C 19 C4' 0.049 REMARK 500 CYS B 144 CB CYS B 144 SG -0.104 REMARK 500 GLN B 536 CG GLN B 536 CD 0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC C 1 O4' - C4' - C3' ANGL. DEV. = -3.1 DEGREES REMARK 500 DG C 2 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG C 3 O4' - C1' - N9 ANGL. DEV. = 7.2 DEGREES REMARK 500 DC C 4 O4' - C4' - C3' ANGL. DEV. = -3.2 DEGREES REMARK 500 DC C 4 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT C 5 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT C 13 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DT C 13 N3 - C4 - O4 ANGL. DEV. = 3.7 DEGREES REMARK 500 DA C 19 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA D 19 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 -83.43 -158.42 REMARK 500 ALA A 9 130.36 177.58 REMARK 500 PRO A 10 47.08 -75.25 REMARK 500 GLN A 14 -161.30 -111.73 REMARK 500 ARG A 30 5.29 -69.77 REMARK 500 LEU A 38 70.13 -110.78 REMARK 500 THR A 41 107.59 -45.91 REMARK 500 THR A 43 -155.90 -123.83 REMARK 500 LYS A 45 -81.41 40.20 REMARK 500 ASN A 57 77.92 45.49 REMARK 500 GLU A 79 -32.34 172.83 REMARK 500 GLU A 132 -72.69 -61.78 REMARK 500 PRO A 322 150.69 -48.84 REMARK 500 ASN A 387 -81.93 -88.40 REMARK 500 HIS A 403 41.51 -105.01 REMARK 500 LYS A 428 92.00 -43.02 REMARK 500 LYS A 471 104.30 -50.69 REMARK 500 ILE A 502 -48.73 -153.41 REMARK 500 ASP A 510 59.65 -92.53 REMARK 500 GLU A 525 156.39 -31.60 REMARK 500 ARG A 540 2.74 -68.30 REMARK 500 PRO B 10 52.00 -91.51 REMARK 500 TYR B 11 154.42 178.82 REMARK 500 GLN B 14 -161.88 -103.93 REMARK 500 LYS B 45 -79.37 30.08 REMARK 500 ASP B 106 60.29 37.59 REMARK 500 ASP B 117 -76.77 71.94 REMARK 500 GLU B 132 -74.54 -90.51 REMARK 500 ASP B 135 66.76 -65.45 REMARK 500 VAL B 142 12.39 -69.39 REMARK 500 MET B 165 132.52 67.09 REMARK 500 GLN B 180 60.91 77.42 REMARK 500 ARG B 189 -159.17 -101.42 REMARK 500 ARG B 196 56.82 -118.33 REMARK 500 GLU B 222 -108.74 -83.59 REMARK 500 GLU B 226 -177.08 -68.11 REMARK 500 LEU B 230 -101.74 -70.08 REMARK 500 VAL B 234 84.19 -65.78 REMARK 500 SER B 310 -74.46 -27.18 REMARK 500 LEU B 315 70.14 47.10 REMARK 500 ASN B 387 -68.88 -100.99 REMARK 500 GLU B 486 -96.28 -69.26 REMARK 500 ILE B 487 -39.04 52.98 REMARK 500 LEU B 509 32.81 -88.83 REMARK 500 ILE B 592 -156.80 -94.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 FLQ IS A FLUORESCEIN ADDUCT. REMARK 600 IT IS ONLY PARTIALLY ORDERED IN THE STRUCTURE REMARK 600 AND IS LINKED TO THE THYMINE 11 THROUGH ATOMS REMARK 600 NOT SEEN IN THE DENSITY. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 FLQ C 473 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLQ C 473 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T5L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE Y96A MUTANT UVRB REVEALING DOMAIN 2. REMARK 900 RELATED ID: 1D9X RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE UVRB REMARK 900 RELATED ID: 1D9Z RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE UVRB BOUND TO ATP REMARK 900 RELATED ID: 1YD1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF UVRC BOUND TO REMARK 900 MAGNESIUM REMARK 900 RELATED ID: 1QOJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN (DOMAIN 4) OF UVRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS STATE THE SEQUENCE DATABASE IS REMARK 999 INCORRECT AT THESE RESIDUES. DBREF 2FDC A 1 658 UNP P56981 UVRB_BACCA 1 657 DBREF 2FDC B 1 658 UNP P56981 UVRB_BACCA 1 657 DBREF 2FDC C 1 20 PDB 2FDC 2FDC 1 20 DBREF 2FDC D 1 20 PDB 2FDC 2FDC 1 20 SEQADV 2FDC ARG A 189 UNP P56981 SEE REMARK 999 SEQADV 2FDC GLU A 233 UNP P56981 LYS 232 SEE REMARK 999 SEQADV 2FDC ARG B 189 UNP P56981 SEE REMARK 999 SEQADV 2FDC GLU B 233 UNP P56981 LYS 232 SEE REMARK 999 SEQRES 1 C 20 DC DG DG DC DT DC DC DA DT DC DT DC DT SEQRES 2 C 20 DA DC DC DG DC DA DA SEQRES 1 D 20 DC DG DG DC DT DC DC DA DT DC DT DC DT SEQRES 2 D 20 DA DC DC DG DC DA DA SEQRES 1 A 658 VAL GLU GLY ARG PHE GLN LEU VAL ALA PRO TYR GLU PRO SEQRES 2 A 658 GLN GLY ASP GLN PRO GLN ALA ILE ALA LYS LEU VAL ASP SEQRES 3 A 658 GLY LEU ARG ARG GLY VAL LYS HIS GLN THR LEU LEU GLY SEQRES 4 A 658 ALA THR GLY THR GLY LYS THR PHE THR ILE SER ASN VAL SEQRES 5 A 658 ILE ALA GLN VAL ASN LYS PRO THR LEU VAL ILE ALA HIS SEQRES 6 A 658 ASN LYS THR LEU ALA GLY GLN LEU TYR SER GLU LEU LYS SEQRES 7 A 658 GLU PHE PHE PRO HIS ASN ALA VAL GLU TYR PHE VAL SER SEQRES 8 A 658 TYR TYR ASP TYR TYR GLN PRO GLU ALA TYR VAL PRO GLN SEQRES 9 A 658 THR ASP THR TYR ILE GLU LYS ASP ALA LYS ILE ASN ASP SEQRES 10 A 658 GLU ILE ASP LYS LEU ARG HIS SER ALA THR SER ALA LEU SEQRES 11 A 658 PHE GLU ARG ARG ASP VAL ILE ILE VAL ALA SER VAL SER SEQRES 12 A 658 CYS ILE TYR GLY LEU GLY SER PRO GLU GLU TYR ARG GLU SEQRES 13 A 658 LEU VAL VAL SER LEU ARG VAL GLY MET GLU ILE GLU ARG SEQRES 14 A 658 ASN ALA LEU LEU ARG ARG LEU VAL ASP ILE GLN TYR ASP SEQRES 15 A 658 ARG ASN ASP ILE ASP PHE ARG ARG GLY THR PHE ARG VAL SEQRES 16 A 658 ARG GLY ASP VAL VAL GLU ILE PHE PRO ALA SER ARG ASP SEQRES 17 A 658 GLU HIS CYS ILE ARG VAL GLU PHE PHE GLY ASP GLU ILE SEQRES 18 A 658 GLU ARG ILE ARG GLU VAL ASP ALA LEU THR GLY GLU VAL SEQRES 19 A 658 LEU GLY GLU ARG GLU HIS VAL ALA ILE PHE PRO ALA SER SEQRES 20 A 658 HIS PHE VAL THR ARG GLU GLU LYS MET ARG LEU ALA ILE SEQRES 21 A 658 GLN ASN ILE GLU GLN GLU LEU GLU GLU ARG LEU ALA GLU SEQRES 22 A 658 LEU ARG ALA GLN GLY LYS LEU LEU GLU ALA GLN ARG LEU SEQRES 23 A 658 GLU GLN ARG THR ARG TYR ASP LEU GLU MET MET ARG GLU SEQRES 24 A 658 MET GLY PHE CYS SER GLY ILE GLU ASN TYR SER ARG HIS SEQRES 25 A 658 LEU ALA LEU ARG PRO PRO GLY SER THR PRO TYR THR LEU SEQRES 26 A 658 LEU ASP TYR PHE PRO ASP ASP PHE LEU ILE ILE VAL ASP SEQRES 27 A 658 GLU SER HIS VAL THR LEU PRO GLN LEU ARG GLY MET TYR SEQRES 28 A 658 ASN GLY ASP ARG ALA ARG LYS GLN VAL LEU VAL ASP HIS SEQRES 29 A 658 GLY PHE ARG LEU PRO SER ALA LEU ASP ASN ARG PRO LEU SEQRES 30 A 658 THR PHE GLU GLU PHE GLU GLN LYS ILE ASN GLN ILE ILE SEQRES 31 A 658 TYR VAL SER ALA THR PRO GLY PRO TYR GLU LEU GLU HIS SEQRES 32 A 658 SER PRO GLY VAL VAL GLU GLN ILE ILE ARG PRO THR GLY SEQRES 33 A 658 LEU LEU ASP PRO THR ILE ASP VAL ARG PRO THR LYS GLY SEQRES 34 A 658 GLN ILE ASP ASP LEU ILE GLY GLU ILE ARG GLU ARG VAL SEQRES 35 A 658 GLU ARG ASN GLU ARG THR LEU VAL THR THR LEU THR LYS SEQRES 36 A 658 LYS MET ALA GLU ASP LEU THR ASP TYR LEU LYS GLU ALA SEQRES 37 A 658 GLY ILE LYS VAL ALA TYR LEU HIS SER GLU ILE LYS THR SEQRES 38 A 658 LEU GLU ARG ILE GLU ILE ILE ARG ASP LEU ARG LEU GLY SEQRES 39 A 658 LYS TYR ASP VAL LEU VAL GLY ILE ASN LEU LEU ARG GLU SEQRES 40 A 658 GLY LEU ASP ILE PRO GLU VAL SER LEU VAL ALA ILE LEU SEQRES 41 A 658 ASP ALA ASP LYS GLU GLY PHE LEU ARG SER GLU ARG SER SEQRES 42 A 658 LEU ILE GLN THR ILE GLY ARG ALA ALA ARG ASN ALA ASN SEQRES 43 A 658 GLY HIS VAL ILE MET TYR ALA ASP THR ILE THR LYS SER SEQRES 44 A 658 MET GLU ILE ALA ILE GLN GLU THR LYS ARG ARG ARG ALA SEQRES 45 A 658 ILE GLN GLU GLU TYR ASN ARG LYS HIS GLY ILE VAL PRO SEQRES 46 A 658 ARG THR VAL LYS LYS GLU ILE ARG ASP VAL ILE ARG ALA SEQRES 47 A 658 THR TYR ALA ALA GLU GLU THR GLU MET TYR GLU ALA LYS SEQRES 48 A 658 PRO ALA ALA ALA MET THR LYS GLN GLU ARG GLU GLU LEU SEQRES 49 A 658 ILE ARG THR LEU GLU ALA GLU MET LYS GLU ALA ALA LYS SEQRES 50 A 658 ALA LEU ASP PHE GLU ARG ALA ALA GLN LEU ARG ASP ILE SEQRES 51 A 658 ILE PHE GLU LEU LYS ALA GLU GLY SEQRES 1 B 658 VAL GLU GLY ARG PHE GLN LEU VAL ALA PRO TYR GLU PRO SEQRES 2 B 658 GLN GLY ASP GLN PRO GLN ALA ILE ALA LYS LEU VAL ASP SEQRES 3 B 658 GLY LEU ARG ARG GLY VAL LYS HIS GLN THR LEU LEU GLY SEQRES 4 B 658 ALA THR GLY THR GLY LYS THR PHE THR ILE SER ASN VAL SEQRES 5 B 658 ILE ALA GLN VAL ASN LYS PRO THR LEU VAL ILE ALA HIS SEQRES 6 B 658 ASN LYS THR LEU ALA GLY GLN LEU TYR SER GLU LEU LYS SEQRES 7 B 658 GLU PHE PHE PRO HIS ASN ALA VAL GLU TYR PHE VAL SER SEQRES 8 B 658 TYR TYR ASP TYR TYR GLN PRO GLU ALA TYR VAL PRO GLN SEQRES 9 B 658 THR ASP THR TYR ILE GLU LYS ASP ALA LYS ILE ASN ASP SEQRES 10 B 658 GLU ILE ASP LYS LEU ARG HIS SER ALA THR SER ALA LEU SEQRES 11 B 658 PHE GLU ARG ARG ASP VAL ILE ILE VAL ALA SER VAL SER SEQRES 12 B 658 CYS ILE TYR GLY LEU GLY SER PRO GLU GLU TYR ARG GLU SEQRES 13 B 658 LEU VAL VAL SER LEU ARG VAL GLY MET GLU ILE GLU ARG SEQRES 14 B 658 ASN ALA LEU LEU ARG ARG LEU VAL ASP ILE GLN TYR ASP SEQRES 15 B 658 ARG ASN ASP ILE ASP PHE ARG ARG GLY THR PHE ARG VAL SEQRES 16 B 658 ARG GLY ASP VAL VAL GLU ILE PHE PRO ALA SER ARG ASP SEQRES 17 B 658 GLU HIS CYS ILE ARG VAL GLU PHE PHE GLY ASP GLU ILE SEQRES 18 B 658 GLU ARG ILE ARG GLU VAL ASP ALA LEU THR GLY GLU VAL SEQRES 19 B 658 LEU GLY GLU ARG GLU HIS VAL ALA ILE PHE PRO ALA SER SEQRES 20 B 658 HIS PHE VAL THR ARG GLU GLU LYS MET ARG LEU ALA ILE SEQRES 21 B 658 GLN ASN ILE GLU GLN GLU LEU GLU GLU ARG LEU ALA GLU SEQRES 22 B 658 LEU ARG ALA GLN GLY LYS LEU LEU GLU ALA GLN ARG LEU SEQRES 23 B 658 GLU GLN ARG THR ARG TYR ASP LEU GLU MET MET ARG GLU SEQRES 24 B 658 MET GLY PHE CYS SER GLY ILE GLU ASN TYR SER ARG HIS SEQRES 25 B 658 LEU ALA LEU ARG PRO PRO GLY SER THR PRO TYR THR LEU SEQRES 26 B 658 LEU ASP TYR PHE PRO ASP ASP PHE LEU ILE ILE VAL ASP SEQRES 27 B 658 GLU SER HIS VAL THR LEU PRO GLN LEU ARG GLY MET TYR SEQRES 28 B 658 ASN GLY ASP ARG ALA ARG LYS GLN VAL LEU VAL ASP HIS SEQRES 29 B 658 GLY PHE ARG LEU PRO SER ALA LEU ASP ASN ARG PRO LEU SEQRES 30 B 658 THR PHE GLU GLU PHE GLU GLN LYS ILE ASN GLN ILE ILE SEQRES 31 B 658 TYR VAL SER ALA THR PRO GLY PRO TYR GLU LEU GLU HIS SEQRES 32 B 658 SER PRO GLY VAL VAL GLU GLN ILE ILE ARG PRO THR GLY SEQRES 33 B 658 LEU LEU ASP PRO THR ILE ASP VAL ARG PRO THR LYS GLY SEQRES 34 B 658 GLN ILE ASP ASP LEU ILE GLY GLU ILE ARG GLU ARG VAL SEQRES 35 B 658 GLU ARG ASN GLU ARG THR LEU VAL THR THR LEU THR LYS SEQRES 36 B 658 LYS MET ALA GLU ASP LEU THR ASP TYR LEU LYS GLU ALA SEQRES 37 B 658 GLY ILE LYS VAL ALA TYR LEU HIS SER GLU ILE LYS THR SEQRES 38 B 658 LEU GLU ARG ILE GLU ILE ILE ARG ASP LEU ARG LEU GLY SEQRES 39 B 658 LYS TYR ASP VAL LEU VAL GLY ILE ASN LEU LEU ARG GLU SEQRES 40 B 658 GLY LEU ASP ILE PRO GLU VAL SER LEU VAL ALA ILE LEU SEQRES 41 B 658 ASP ALA ASP LYS GLU GLY PHE LEU ARG SER GLU ARG SER SEQRES 42 B 658 LEU ILE GLN THR ILE GLY ARG ALA ALA ARG ASN ALA ASN SEQRES 43 B 658 GLY HIS VAL ILE MET TYR ALA ASP THR ILE THR LYS SER SEQRES 44 B 658 MET GLU ILE ALA ILE GLN GLU THR LYS ARG ARG ARG ALA SEQRES 45 B 658 ILE GLN GLU GLU TYR ASN ARG LYS HIS GLY ILE VAL PRO SEQRES 46 B 658 ARG THR VAL LYS LYS GLU ILE ARG ASP VAL ILE ARG ALA SEQRES 47 B 658 THR TYR ALA ALA GLU GLU THR GLU MET TYR GLU ALA LYS SEQRES 48 B 658 PRO ALA ALA ALA MET THR LYS GLN GLU ARG GLU GLU LEU SEQRES 49 B 658 ILE ARG THR LEU GLU ALA GLU MET LYS GLU ALA ALA LYS SEQRES 50 B 658 ALA LEU ASP PHE GLU ARG ALA ALA GLN LEU ARG ASP ILE SEQRES 51 B 658 ILE PHE GLU LEU LYS ALA GLU GLY HET FLQ C 473 32 HETNAM FLQ N-[6-(ACETYLAMINO)HEXYL]-3',6'-DIHYDROXY-3-OXO-3H- HETNAM 2 FLQ SPIRO[2-BENZOFURAN-1,9'-XANTHENE]-6-CARBOXAMIDE HETSYN FLQ FLUORESCEIN ADDUCT FORMUL 5 FLQ C29 H28 N2 O7 HELIX 1 1 ASP A 16 ARG A 30 1 15 HELIX 2 2 LYS A 45 ASN A 57 1 13 HELIX 3 3 ASN A 66 PHE A 81 1 16 HELIX 4 4 ASN A 116 ARG A 133 1 18 HELIX 5 5 VAL A 142 ILE A 145 5 4 HELIX 6 6 SER A 150 GLU A 156 1 7 HELIX 7 7 ARG A 252 ALA A 276 1 25 HELIX 8 8 LYS A 279 GLY A 301 1 23 HELIX 9 9 GLY A 305 ASN A 308 5 4 HELIX 10 10 TYR A 309 ALA A 314 1 6 HELIX 11 11 LEU A 326 PHE A 329 5 4 HELIX 12 12 GLU A 339 HIS A 364 1 26 HELIX 13 13 LEU A 368 ASN A 374 5 7 HELIX 14 14 THR A 378 ILE A 386 1 9 HELIX 15 15 GLY A 397 HIS A 403 1 7 HELIX 16 16 GLY A 429 ARG A 444 1 16 HELIX 17 17 THR A 454 ALA A 468 1 15 HELIX 18 18 GLU A 483 GLY A 494 1 12 HELIX 19 19 SER A 530 ARG A 540 1 11 HELIX 20 20 THR A 557 HIS A 581 1 25 HELIX 21 21 ASP B 16 ARG B 30 1 15 HELIX 22 22 LYS B 45 ASN B 57 1 13 HELIX 23 23 ASN B 66 PHE B 81 1 16 HELIX 24 24 ASP B 117 ARG B 133 1 17 HELIX 25 25 VAL B 142 ILE B 145 5 4 HELIX 26 26 SER B 150 LEU B 157 1 8 HELIX 27 27 ASN B 170 ILE B 179 1 10 HELIX 28 28 ARG B 252 GLN B 277 1 26 HELIX 29 29 LYS B 279 GLY B 301 1 23 HELIX 30 30 GLY B 305 ASN B 308 5 4 HELIX 31 31 TYR B 309 ALA B 314 1 6 HELIX 32 32 LEU B 326 PHE B 329 5 4 HELIX 33 33 GLU B 339 HIS B 364 1 26 HELIX 34 34 LEU B 368 ASN B 374 5 7 HELIX 35 35 THR B 378 LYS B 385 1 8 HELIX 36 36 GLY B 397 SER B 404 1 8 HELIX 37 37 GLY B 429 ARG B 444 1 16 HELIX 38 38 THR B 454 GLY B 469 1 16 HELIX 39 39 ILE B 487 LEU B 493 1 7 HELIX 40 40 SER B 530 GLY B 539 1 10 HELIX 41 41 ARG B 540 ALA B 542 5 3 HELIX 42 42 THR B 557 GLY B 582 1 26 SHEET 1 A 7 ALA A 85 PHE A 89 0 SHEET 2 A 7 VAL A 136 ALA A 140 1 O VAL A 139 N GLU A 87 SHEET 3 A 7 THR A 60 ILE A 63 1 N VAL A 62 O ALA A 140 SHEET 4 A 7 LEU A 334 ASP A 338 1 O ILE A 336 N LEU A 61 SHEET 5 A 7 GLN A 388 VAL A 392 1 O ILE A 390 N ILE A 335 SHEET 6 A 7 HIS A 34 GLY A 39 1 N LEU A 37 O TYR A 391 SHEET 7 A 7 VAL A 408 GLN A 410 1 O VAL A 408 N LEU A 38 SHEET 1 B 2 TYR A 93 GLN A 97 0 SHEET 2 B 2 ASP A 112 ILE A 115 -1 O LYS A 114 N TYR A 95 SHEET 1 C 2 ALA A 100 VAL A 102 0 SHEET 2 C 2 THR A 107 ILE A 109 -1 O THR A 107 N VAL A 102 SHEET 1 D 2 GLY A 147 LEU A 148 0 SHEET 2 D 2 TYR A 323 THR A 324 -1 O TYR A 323 N LEU A 148 SHEET 1 E 6 THR A 421 ARG A 425 0 SHEET 2 E 6 HIS A 548 TYR A 552 1 O MET A 551 N ASP A 423 SHEET 3 E 6 VAL A 514 LEU A 520 1 N ILE A 519 O ILE A 550 SHEET 4 E 6 ARG A 447 THR A 451 1 N LEU A 449 O ALA A 518 SHEET 5 E 6 VAL A 498 GLY A 501 1 O GLY A 501 N VAL A 450 SHEET 6 E 6 VAL A 472 TYR A 474 1 N ALA A 473 O VAL A 500 SHEET 1 F 7 ALA B 85 PHE B 89 0 SHEET 2 F 7 VAL B 136 ALA B 140 1 O ILE B 137 N GLU B 87 SHEET 3 F 7 THR B 60 ILE B 63 1 N THR B 60 O ILE B 138 SHEET 4 F 7 LEU B 334 ASP B 338 1 O ILE B 336 N LEU B 61 SHEET 5 F 7 GLN B 388 VAL B 392 1 O ILE B 390 N ILE B 335 SHEET 6 F 7 HIS B 34 GLY B 39 1 N LEU B 37 O TYR B 391 SHEET 7 F 7 VAL B 408 GLN B 410 1 O VAL B 408 N LEU B 38 SHEET 1 G 2 TYR B 93 GLN B 97 0 SHEET 2 G 2 ASP B 112 ILE B 115 -1 O ASP B 112 N GLN B 97 SHEET 1 H 2 ALA B 100 VAL B 102 0 SHEET 2 H 2 THR B 107 ILE B 109 -1 O ILE B 109 N ALA B 100 SHEET 1 I 2 GLY B 147 LEU B 148 0 SHEET 2 I 2 TYR B 323 THR B 324 -1 O TYR B 323 N LEU B 148 SHEET 1 J 2 VAL B 159 ARG B 162 0 SHEET 2 J 2 HIS B 240 ILE B 243 -1 O ILE B 243 N VAL B 159 SHEET 1 K 5 ASP B 182 ARG B 183 0 SHEET 2 K 5 THR B 192 VAL B 195 1 O PHE B 193 N ASP B 182 SHEET 3 K 5 VAL B 200 PHE B 203 -1 O GLU B 201 N ARG B 194 SHEET 4 K 5 ILE B 212 PHE B 217 -1 O VAL B 214 N VAL B 200 SHEET 5 K 5 GLU B 220 ARG B 225 -1 O GLU B 222 N GLU B 215 SHEET 1 L 6 THR B 421 ARG B 425 0 SHEET 2 L 6 HIS B 548 TYR B 552 1 O MET B 551 N ASP B 423 SHEET 3 L 6 VAL B 514 ILE B 519 1 N VAL B 517 O HIS B 548 SHEET 4 L 6 ARG B 447 THR B 451 1 N LEU B 449 O ALA B 518 SHEET 5 L 6 VAL B 498 GLY B 501 1 O LEU B 499 N VAL B 450 SHEET 6 L 6 VAL B 472 TYR B 474 1 N ALA B 473 O VAL B 500 SITE 1 AC1 10 HIS B 65 ASN B 66 PRO B 345 GLN B 346 SITE 2 AC1 10 ASN B 503 LEU B 505 DC C 4 DT C 5 SITE 3 AC1 10 DT C 13 DA C 14 CRYST1 153.265 153.265 160.170 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006530 0.003770 0.000000 0.00000 SCALE2 0.000000 0.007530 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006240 0.00000