HEADER IMMUNE SYSTEM 16-JAN-94 2FGW TITLE X-RAY STRUCTURES OF FRAGMENTS FROM BINDING AND NONBINDING VERSIONS OF TITLE 2 A HUMANIZED ANTI-CD18 ANTIBODY: STRUCTURAL INDICATIONS OF THE KEY TITLE 3 ROLE OF VH RESIDUES 59 TO 65 COMPND MOL_ID: 1; COMPND 2 MOLECULE: H52 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: H52 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606 KEYWDS IMMUNOGLOBULIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR C.EIGENBROT,J.KESSLER REVDAT 4 29-NOV-17 2FGW 1 REMARK HELIX REVDAT 3 18-SEP-13 2FGW 1 SOURCE VERSN HEADER REVDAT 2 24-FEB-09 2FGW 1 VERSN REVDAT 1 30-APR-94 2FGW 0 JRNL AUTH C.EIGENBROT,T.GONZALEZ,J.MAYEDA,P.CARTER,W.WERTHER, JRNL AUTH 2 T.HOTALING,J.FOX,J.KESSLER JRNL TITL X-RAY STRUCTURES OF FRAGMENTS FROM BINDING AND NONBINDING JRNL TITL 2 VERSIONS OF A HUMANIZED ANTI-CD18 ANTIBODY: STRUCTURAL JRNL TITL 3 INDICATIONS OF THE KEY ROLE OF VH RESIDUES 59 TO 65. JRNL REF PROTEINS V. 18 49 1994 JRNL REFN ISSN 0887-3585 JRNL PMID 7908437 JRNL DOI 10.1002/PROT.340180107 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3282 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.017 REMARK 3 BOND ANGLES (DEGREES) : 3.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FGW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY H 101 REMARK 465 LEU H 102 REMARK 465 ASN H 103 REMARK 465 TYR H 104 REMARK 465 GLY H 105 REMARK 465 PHE H 106 REMARK 465 ASP H 107 REMARK 465 VAL H 108 REMARK 465 LYS H 229 REMARK 465 THR H 230 REMARK 465 HIS H 231 REMARK 465 THR H 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TRP H 99 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP H 99 CZ3 CH2 REMARK 470 ARG H 100 CG CD NE CZ NH1 NH2 REMARK 470 ARG H 109 CG CD NE CZ NH1 NH2 REMARK 470 GLU H 223 CG CD OE1 OE2 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 SER H 138 REMARK 475 SER H 139 REMARK 475 LYS H 140 REMARK 475 SER H 141 REMARK 475 THR H 142 REMARK 475 SER H 143 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 198 NE2 HIS L 198 CD2 -0.075 REMARK 500 HIS H 35 NE2 HIS H 35 CD2 -0.069 REMARK 500 HIS H 60 NE2 HIS H 60 CD2 -0.081 REMARK 500 HIS H 211 NE2 HIS H 211 CD2 -0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP L 1 CA - C - N ANGL. DEV. = -13.6 DEGREES REMARK 500 VAL L 19 CG1 - CB - CG2 ANGL. DEV. = -11.3 DEGREES REMARK 500 CYS L 23 CA - CB - SG ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG L 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP L 28 CA - C - N ANGL. DEV. = -15.2 DEGREES REMARK 500 TRP L 35 CD1 - CG - CD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 TRP L 35 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 GLN L 38 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 LEU L 46 CA - CB - CG ANGL. DEV. = 21.8 DEGREES REMARK 500 ARG L 61 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 SER L 67 CA - CB - OG ANGL. DEV. = -18.6 DEGREES REMARK 500 GLU L 105 CA - CB - CG ANGL. DEV. = -14.5 DEGREES REMARK 500 ARG L 108 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG L 108 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 CYS L 134 CA - CB - SG ANGL. DEV. = 12.1 DEGREES REMARK 500 TRP L 148 CD1 - CG - CD2 ANGL. DEV. = 9.2 DEGREES REMARK 500 TRP L 148 CG - CD1 - NE1 ANGL. DEV. = -6.8 DEGREES REMARK 500 TRP L 148 CE2 - CD2 - CG ANGL. DEV. = -6.6 DEGREES REMARK 500 GLU L 161 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 ASP L 170 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 TYR L 173 CB - CG - CD1 ANGL. DEV. = -5.2 DEGREES REMARK 500 TYR L 192 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 VAL L 196 CA - CB - CG2 ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG L 211 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 GLY L 212 CA - C - N ANGL. DEV. = -14.4 DEGREES REMARK 500 CYS L 214 CA - CB - SG ANGL. DEV. = 8.0 DEGREES REMARK 500 TRP H 36 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP H 36 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP H 47 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP H 47 CE2 - CD2 - CG ANGL. DEV. = -5.0 DEGREES REMARK 500 ILE H 51 CB - CA - C ANGL. DEV. = -14.3 DEGREES REMARK 500 ARG H 63 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 VAL H 72 CA - CB - CG2 ANGL. DEV. = -9.4 DEGREES REMARK 500 THR H 76 CA - CB - OG1 ANGL. DEV. = -17.4 DEGREES REMARK 500 THR H 76 CA - CB - CG2 ANGL. DEV. = 13.3 DEGREES REMARK 500 MET H 81 CA - CB - CG ANGL. DEV. = -13.0 DEGREES REMARK 500 TRP H 114 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP H 114 CE2 - CD2 - CG ANGL. DEV. = -5.0 DEGREES REMARK 500 LEU H 119 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ASP H 155 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 TYR H 156 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 PRO H 160 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 TRP H 165 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP H 165 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP H 165 CA - C - N ANGL. DEV. = -14.0 DEGREES REMARK 500 THR H 194 CA - C - N ANGL. DEV. = -16.4 DEGREES REMARK 500 VAL H 195 CA - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 TYR H 205 CB - CG - CD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 PRO H 224 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 PRO H 224 N - CA - C ANGL. DEV. = 21.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 31 6.58 84.79 REMARK 500 LEU L 47 -61.99 -94.91 REMARK 500 TYR L 50 72.40 58.86 REMARK 500 THR L 51 -65.11 49.83 REMARK 500 SER L 60 -27.96 -37.38 REMARK 500 VAL L 110 123.38 -32.49 REMARK 500 SER L 121 129.32 -35.79 REMARK 500 SER L 127 20.02 -69.46 REMARK 500 ASN L 158 33.17 -147.67 REMARK 500 ASP L 170 37.31 -149.64 REMARK 500 SER L 171 32.50 39.83 REMARK 500 GLU L 187 -2.77 -59.75 REMARK 500 PRO L 204 122.76 -30.23 REMARK 500 ARG L 211 103.34 81.60 REMARK 500 GLU L 213 80.00 -169.06 REMARK 500 LYS H 43 -165.56 -167.61 REMARK 500 ASN H 55 16.98 -145.48 REMARK 500 ASN H 61 106.56 -57.44 REMARK 500 GLN H 62 -26.75 -32.12 REMARK 500 ALA H 92 173.07 175.23 REMARK 500 TRP H 99 161.72 85.49 REMARK 500 TYR H 110 143.47 174.90 REMARK 500 PRO H 137 88.81 -57.65 REMARK 500 SER H 139 117.92 1.28 REMARK 500 SER H 141 -60.91 -167.34 REMARK 500 SER H 184 -37.88 -31.57 REMARK 500 THR H 202 -7.63 -141.51 REMARK 500 GLN H 203 145.74 -170.01 REMARK 500 PRO H 213 -6.44 -50.01 REMARK 500 ASN H 215 68.41 19.24 REMARK 500 PRO H 224 145.68 -10.16 REMARK 500 LYS H 225 -128.87 69.38 REMARK 500 SER H 226 -107.26 167.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR L 36 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 2FGW L 4 214 EMBL X95750 CAA65061 26 236 DBREF 2FGW H 1 232 PDB 2FGW 2FGW 1 232 SEQADV 2FGW SER L 14 EMBL X95750 PHE 36 CONFLICT SEQADV 2FGW ASP L 28 EMBL X95750 SER 50 CONFLICT SEQADV 2FGW ASN L 30 EMBL X95750 SER 52 CONFLICT SEQADV 2FGW ASN L 31 EMBL X95750 SER 53 CONFLICT SEQADV 2FGW TYR L 50 EMBL X95750 ALA 72 CONFLICT SEQADV 2FGW THR L 51 EMBL X95750 ALA 73 CONFLICT SEQADV 2FGW THR L 53 EMBL X95750 SER 75 CONFLICT SEQADV 2FGW HIS L 55 EMBL X95750 GLN 77 CONFLICT SEQADV 2FGW TYR L 71 EMBL X95750 PHE 93 CONFLICT SEQADV 2FGW GLY L 91 EMBL X95750 SER 113 CONFLICT SEQADV 2FGW ASN L 92 EMBL X95750 HIS 114 CONFLICT SEQADV 2FGW THR L 93 EMBL X95750 SER 115 CONFLICT SEQADV 2FGW LEU L 94 EMBL X95750 THR 116 CONFLICT SEQADV 2FGW PRO L 96 EMBL X95750 TYR 118 CONFLICT SEQADV 2FGW LYS L 103 EMBL X95750 ASN 125 CONFLICT SEQADV 2FGW VAL L 104 EMBL X95750 LEU 126 CONFLICT SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN ASP ILE ASN ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR TYR THR SER SEQRES 5 L 214 THR LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN GLY SEQRES 8 L 214 ASN THR LEU PRO PRO THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 H 232 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 232 PRO GLY GLY SER LEU ARG LEU SER CYS ALA THR SER GLY SEQRES 3 H 232 TYR THR PHE THR GLU TYR THR MET HIS TRP MET ARG GLN SEQRES 4 H 232 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA GLY ILE ASN SEQRES 5 H 232 PRO LYS ASN GLY GLY THR SER HIS ASN GLN ARG PHE MET SEQRES 6 H 232 ASP ARG PHE THR ILE SER VAL ASP LYS SER THR SER THR SEQRES 7 H 232 ALA TYR MET GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 232 ALA VAL TYR TYR CYS ALA ARG TRP ARG GLY LEU ASN TYR SEQRES 9 H 232 GLY PHE ASP VAL ARG TYR PHE ASP VAL TRP GLY GLN GLY SEQRES 10 H 232 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 232 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 232 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 232 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 232 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 232 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 232 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 232 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 H 232 VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR HELIX 1 A1 PRO L 80 ASP L 82 5 3 HELIX 2 A2 ASP L 122 LYS L 126 1 5 HELIX 3 A3 LYS L 183 TYR L 186 1 4 HELIX 4 B1 PHE H 29 GLU H 31 5 3 HELIX 5 B2 PRO H 53 ASN H 55 5 3 HELIX 6 B3 ALA H 88 ASP H 90 5 3 HELIX 7 B4 ASN H 166 GLY H 168 5 3 HELIX 8 B5 SER H 197 THR H 202 5 6 HELIX 9 B6 LYS H 212 SER H 214 5 3 SHEET 1 A1 4 MET L 4 SER L 7 0 SHEET 2 A1 4 VAL L 19 ALA L 25 -1 N THR L 22 O SER L 7 SHEET 3 A1 4 TYR L 71 ILE L 75 -1 N LEU L 73 O ILE L 21 SHEET 4 A1 4 PHE L 62 GLY L 66 -1 O SER L 63 N THR L 74 SHEET 1 A2 6 SER L 10 SER L 14 0 SHEET 2 A2 6 THR L 97 LYS L 107 1 O LYS L 103 N LEU L 11 SHEET 3 A2 6 THR L 85 GLN L 90 -1 O CYS L 88 N GLY L 99 SHEET 4 A2 6 LEU L 33 GLN L 38 -1 O GLN L 38 N THR L 85 SHEET 5 A2 6 LYS L 45 TYR L 49 -1 N LYS L 45 O GLN L 37 SHEET 6 A2 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 A3 4 SER L 114 PHE L 118 0 SHEET 2 A3 4 THR L 129 PHE L 139 1 N ASN L 137 O SER L 114 SHEET 3 A3 4 TYR L 173 SER L 182 -1 N LEU L 175 O LEU L 136 SHEET 4 A3 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 A4 3 LYS L 145 VAL L 150 0 SHEET 2 A4 3 VAL L 191 VAL L 196 -1 N ALA L 193 O LYS L 149 SHEET 3 A4 3 VAL L 205 ASN L 210 -1 N PHE L 209 O TYR L 192 SHEET 1 B1 4 GLN H 3 SER H 7 0 SHEET 2 B1 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 B1 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 B1 4 PHE H 68 ASP H 73 -1 O SER H 71 N TYR H 80 SHEET 1 B2 6 LEU H 11 VAL H 12 0 SHEET 2 B2 6 VAL H 113 VAL H 122 1 O THR H 121 N VAL H 12 SHEET 3 B2 6 ALA H 92 ARG H 98 -1 O ALA H 92 N VAL H 120 SHEET 4 B2 6 MET H 34 GLN H 39 -1 N GLN H 39 O VAL H 93 SHEET 5 B2 6 LEU H 45 ASN H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 B2 6 GLY H 57 HIS H 60 -1 O SER H 59 N GLY H 50 SHEET 1 B3 4 SER H 131 LEU H 135 0 SHEET 2 B3 4 THR H 146 TYR H 156 -1 N LEU H 152 O PHE H 133 SHEET 3 B3 4 TYR H 187 PRO H 196 -1 N SER H 191 O CYS H 151 SHEET 4 B3 4 HIS H 175 LEU H 181 -1 N PHE H 177 O SER H 190 SHEET 1 B4 3 THR H 162 TRP H 165 0 SHEET 2 B4 3 TYR H 205 HIS H 211 -1 O ASN H 210 N THR H 162 SHEET 3 B4 3 THR H 216 VAL H 222 -1 O VAL H 218 N VAL H 209 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.00 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.00 SSBOND 3 CYS L 214 CYS H 227 1555 1555 2.05 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.01 SSBOND 5 CYS H 151 CYS H 207 1555 1555 2.00 CISPEP 1 SER L 7 PRO L 8 0 0.21 CISPEP 2 LEU L 94 PRO L 95 0 -20.58 CISPEP 3 TYR L 140 PRO L 141 0 -5.51 CISPEP 4 PHE H 157 PRO H 158 0 -15.86 CISPEP 5 GLU H 159 PRO H 160 0 -13.29 CRYST1 101.000 101.000 45.500 90.00 90.00 120.00 P 3 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009901 0.005716 0.000000 0.00000 SCALE2 0.000000 0.011433 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021978 0.00000