HEADER LYASE 03-JAN-06 2FJT TITLE ADENYLYL CYCLASE CLASS IV FROM YERSINIA PESTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLYL CYCLASE CLASS IV; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: COG1437: ADENYLATE CYCLASE, CLASS 4; COMPND 5 EC: 4.6.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: TRICLINIC FORM, PH 4.6 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 187410; SOURCE 4 STRAIN: KIM; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CYCLASE; BETA BARREL; DIMER, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR D.T.GALLAGHER,N.N.SMITH,S.-K.KIM,P.T.REDDY,H.ROBINSON,A.HEROUX REVDAT 5 03-APR-24 2FJT 1 REMARK SEQADV LINK REVDAT 4 31-JAN-18 2FJT 1 REMARK REVDAT 3 13-JUL-11 2FJT 1 VERSN REVDAT 2 24-FEB-09 2FJT 1 VERSN REVDAT 1 14-NOV-06 2FJT 0 JRNL AUTH D.T.GALLAGHER,N.N.SMITH,S.-K.KIM,A.HEROUX,H.ROBINSON, JRNL AUTH 2 P.T.REDDY JRNL TITL STRUCTURE OF THE CLASS IV ADENYLYL CYCLASE REVEALS A NOVEL JRNL TITL 2 FOLD JRNL REF J.MOL.BIOL. V. 362 114 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16905149 JRNL DOI 10.1016/J.JMB.2006.07.008 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.N.SMITH,S.-K.KIM,P.T.REDDY,D.T.GALLAGHER REMARK 1 TITL CRYSTALLIZATION OF THE CLASS IV ADENYLYL CYCLASE FROM REMARK 1 TITL 2 YERSINIA PESTIS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 62 2006 REMARK 1 REFN ESSN 1744-3091 REMARK 1 DOI 10.1107/S1744309106002855 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 9.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 19540 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1280 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1279 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.3470 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.4560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2804 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50000 REMARK 3 B22 (A**2) : -0.14000 REMARK 3 B33 (A**2) : 0.52000 REMARK 3 B12 (A**2) : 0.23000 REMARK 3 B13 (A**2) : -0.29000 REMARK 3 B23 (A**2) : 0.08000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.286 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.221 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.166 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.679 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2862 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3864 ; 1.685 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 351 ; 7.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;40.146 ;24.861 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 506 ;17.877 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.196 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 429 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2167 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1218 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1836 ; 0.298 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 208 ; 0.215 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 75 ; 0.218 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.275 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1819 ; 1.030 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2809 ; 1.531 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1178 ; 2.450 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1055 ; 3.736 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FJT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000035961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20986 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 200 DATA REDUNDANCY : 2.040 REMARK 200 R MERGE (I) : 0.02600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.04 REMARK 200 R MERGE FOR SHELL (I) : 0.17000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: ORTHORHOMBIC CRYSTAL FORM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM AMMONIUM SULFATE, 100 MM SODIUM REMARK 280 ACETATE, 14% PEG 4000, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 QUATERNARY STRUCTURE FOR THIS ENTRY: DIMER REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC REMARK 300 ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAINS REMARK 300 (1 BIOLOGICAL DIMER). REMARK 300 SEE REMARK 350 FOR INFORMATION ON GENERATING REMARK 300 THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 HIS B 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 2 CB OG REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 PHE B 5 CB CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 7 N GLY A 7 CA 0.111 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 80 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 ARG A 113 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 113 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 6 -158.41 -117.60 REMARK 500 ASN A 49 -142.45 62.31 REMARK 500 ALA A 80 -79.65 -34.59 REMARK 500 VAL B 6 86.70 164.73 REMARK 500 GLN B 51 20.15 -152.73 REMARK 500 CSX B 83 123.76 -174.88 REMARK 500 LEU B 131 -57.53 -132.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 DBREF 2FJT A 1 179 UNP Q7CH76 Q7CH76_YERPE 1 179 DBREF 2FJT B 1 179 UNP Q7CH76 Q7CH76_YERPE 1 179 SEQADV 2FJT GLY A -2 UNP Q7CH76 CLONING ARTIFACT SEQADV 2FJT SER A -1 UNP Q7CH76 CLONING ARTIFACT SEQADV 2FJT HIS A 0 UNP Q7CH76 CLONING ARTIFACT SEQADV 2FJT CSX A 83 UNP Q7CH76 CYS 83 MODIFIED RESIDUE SEQADV 2FJT GLY B -2 UNP Q7CH76 CLONING ARTIFACT SEQADV 2FJT SER B -1 UNP Q7CH76 CLONING ARTIFACT SEQADV 2FJT HIS B 0 UNP Q7CH76 CLONING ARTIFACT SEQADV 2FJT CSX B 83 UNP Q7CH76 CYS 83 MODIFIED RESIDUE SEQRES 1 A 182 GLY SER HIS MET SER GLU HIS PHE VAL GLY LYS TYR GLU SEQRES 2 A 182 VAL GLU LEU LYS PHE ARG VAL MET ASP LEU THR THR LEU SEQRES 3 A 182 HIS GLU GLN LEU VAL ALA GLN LYS ALA THR ALA PHE THR SEQRES 4 A 182 LEU ASN ASN HIS GLU LYS ASP ILE TYR LEU ASP ALA ASN SEQRES 5 A 182 GLY GLN ASP LEU ALA ASP GLN GLN ILE SER MET VAL LEU SEQRES 6 A 182 ARG GLU MET ASN PRO SER GLY ILE ARG LEU TRP ILE VAL SEQRES 7 A 182 LYS GLY PRO GLY ALA GLU ARG CSX GLU ALA SER ASN ILE SEQRES 8 A 182 GLU ASP VAL SER LYS VAL GLN SER MET LEU ALA THR LEU SEQRES 9 A 182 GLY TYR HIS PRO ALA PHE THR ILE GLU LYS GLN ARG SER SEQRES 10 A 182 ILE TYR PHE VAL GLY LYS PHE HIS ILE THR VAL ASP HIS SEQRES 11 A 182 LEU THR GLY LEU GLY ASP PHE ALA GLU ILE ALA ILE MET SEQRES 12 A 182 THR ASP ASP ALA THR GLU LEU ASP LYS LEU LYS ALA GLU SEQRES 13 A 182 CYS ARG ASP PHE ALA ASN THR PHE GLY LEU GLN VAL ASP SEQRES 14 A 182 GLN GLN GLU PRO ARG SER TYR ARG GLN LEU LEU GLY PHE SEQRES 1 B 182 GLY SER HIS MET SER GLU HIS PHE VAL GLY LYS TYR GLU SEQRES 2 B 182 VAL GLU LEU LYS PHE ARG VAL MET ASP LEU THR THR LEU SEQRES 3 B 182 HIS GLU GLN LEU VAL ALA GLN LYS ALA THR ALA PHE THR SEQRES 4 B 182 LEU ASN ASN HIS GLU LYS ASP ILE TYR LEU ASP ALA ASN SEQRES 5 B 182 GLY GLN ASP LEU ALA ASP GLN GLN ILE SER MET VAL LEU SEQRES 6 B 182 ARG GLU MET ASN PRO SER GLY ILE ARG LEU TRP ILE VAL SEQRES 7 B 182 LYS GLY PRO GLY ALA GLU ARG CSX GLU ALA SER ASN ILE SEQRES 8 B 182 GLU ASP VAL SER LYS VAL GLN SER MET LEU ALA THR LEU SEQRES 9 B 182 GLY TYR HIS PRO ALA PHE THR ILE GLU LYS GLN ARG SER SEQRES 10 B 182 ILE TYR PHE VAL GLY LYS PHE HIS ILE THR VAL ASP HIS SEQRES 11 B 182 LEU THR GLY LEU GLY ASP PHE ALA GLU ILE ALA ILE MET SEQRES 12 B 182 THR ASP ASP ALA THR GLU LEU ASP LYS LEU LYS ALA GLU SEQRES 13 B 182 CYS ARG ASP PHE ALA ASN THR PHE GLY LEU GLN VAL ASP SEQRES 14 B 182 GLN GLN GLU PRO ARG SER TYR ARG GLN LEU LEU GLY PHE MODRES 2FJT CSX A 83 CYS S-OXY CYSTEINE MODRES 2FJT CSX B 83 CYS S-OXY CYSTEINE HET CSX A 83 7 HET CSX B 83 7 HET SO4 A 201 5 HET SO4 B 202 5 HETNAM CSX S-OXY CYSTEINE HETNAM SO4 SULFATE ION FORMUL 1 CSX 2(C3 H7 N O3 S) FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *304(H2 O) HELIX 1 1 LEU A 20 GLN A 30 1 11 HELIX 2 2 LEU A 53 GLN A 57 5 5 HELIX 3 3 ASP A 90 LEU A 101 1 12 HELIX 4 4 ASP A 143 THR A 145 5 3 HELIX 5 5 GLU A 146 PHE A 161 1 16 HELIX 6 6 GLN A 164 GLN A 168 5 5 HELIX 7 7 SER A 172 GLY A 178 1 7 HELIX 8 8 ASP B 19 GLN B 30 1 12 HELIX 9 9 LEU B 53 GLN B 57 5 5 HELIX 10 10 ASP B 90 LEU B 101 1 12 HELIX 11 11 ASP B 143 THR B 145 5 3 HELIX 12 12 GLU B 146 PHE B 161 1 16 HELIX 13 13 GLN B 164 GLN B 168 5 5 SHEET 1 A 8 TYR A 9 VAL A 17 0 SHEET 2 A 8 GLY A 132 THR A 141 -1 O ALA A 135 N PHE A 15 SHEET 3 A 8 PHE A 121 LEU A 128 -1 N ASP A 126 O PHE A 134 SHEET 4 A 8 HIS A 104 VAL A 118 -1 N TYR A 116 O ILE A 123 SHEET 5 A 8 THR A 33 ASP A 47 -1 N TYR A 45 O ALA A 106 SHEET 6 A 8 SER A 59 ASN A 66 -1 O MET A 60 N LEU A 46 SHEET 7 A 8 ARG A 71 LYS A 76 -1 O LYS A 76 N SER A 59 SHEET 8 A 8 CSX A 83 ASN A 87 -1 O SER A 86 N TRP A 73 SHEET 1 B 8 TYR B 9 ARG B 16 0 SHEET 2 B 8 GLY B 132 THR B 141 -1 O ILE B 137 N LEU B 13 SHEET 3 B 8 PHE B 121 LEU B 128 -1 N ASP B 126 O PHE B 134 SHEET 4 B 8 HIS B 104 VAL B 118 -1 N TYR B 116 O ILE B 123 SHEET 5 B 8 THR B 33 ASP B 47 -1 N ASN B 39 O ARG B 113 SHEET 6 B 8 SER B 59 ASN B 66 -1 O ASN B 66 N HIS B 40 SHEET 7 B 8 ILE B 70 LYS B 76 -1 O LYS B 76 N SER B 59 SHEET 8 B 8 CSX B 83 ASN B 87 -1 O GLU B 84 N VAL B 75 LINK C ARG A 82 N CSX A 83 1555 1555 1.32 LINK C CSX A 83 N GLU A 84 1555 1555 1.34 LINK C ARG B 82 N CSX B 83 1555 1555 1.33 LINK C CSX B 83 N GLU B 84 1555 1555 1.33 CISPEP 1 ASN A 66 PRO A 67 0 10.77 CISPEP 2 GLY A 77 PRO A 78 0 -1.96 CISPEP 3 ASN B 66 PRO B 67 0 9.85 CISPEP 4 GLY B 77 PRO B 78 0 -1.64 SITE 1 AC1 9 ARG A 63 LYS A 76 LYS A 111 ARG A 113 SITE 2 AC1 9 GLU A 136 TYR A 173 HOH A 398 HOH A 421 SITE 3 AC1 9 HOH A 507 SITE 1 AC2 7 LYS B 76 LYS B 111 ARG B 113 GLU B 136 SITE 2 AC2 7 TYR B 173 HOH B 379 HOH B 492 CRYST1 33.529 35.548 71.985 88.89 82.63 65.47 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029825 -0.013611 -0.004372 0.00000 SCALE2 0.000000 0.030922 0.001162 0.00000 SCALE3 0.000000 0.000000 0.014017 0.00000