HEADER TRANSPORT PROTEIN 03-JAN-06 2FJY TITLE CRYSTAL STRUCTURE OF B-FORM BOMBYX MORI PHEROMONE BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHEROMONE-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PBP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: DOMESTIC SILKWORM; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 GENE: PBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ALPHA HELICAL, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LAUTENSCHLAGER,W.S.LEAL,J.CLARDY REVDAT 5 09-OCT-24 2FJY 1 REMARK REVDAT 4 30-AUG-23 2FJY 1 REMARK REVDAT 3 18-OCT-17 2FJY 1 REMARK REVDAT 2 24-FEB-09 2FJY 1 VERSN REVDAT 1 17-JAN-06 2FJY 0 JRNL AUTH C.LAUTENSCHLAGER,W.S.LEAL,J.CLARDY JRNL TITL COIL-TO-HELIX TRANSITION AND LIGAND RELEASE OF BOMBYX MORI JRNL TITL 2 PHEROMONE-BINDING PROTEIN. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 335 1044 2005 JRNL REFN ISSN 0006-291X JRNL PMID 16111659 JRNL DOI 10.1016/J.BBRC.2005.07.176 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 3 NUMBER OF REFLECTIONS : 12080 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 605 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 790 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 42 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2166 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 95 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.23000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.514 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.290 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.617 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2212 ; 0.048 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1922 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2985 ; 2.533 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4528 ; 1.133 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 5.562 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.174 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2458 ; 0.015 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 394 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 583 ; 0.231 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2147 ; 0.250 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1227 ; 0.098 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.314 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 79 ; 0.365 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.216 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1378 ; 2.324 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2201 ; 4.414 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 834 ; 5.153 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 784 ; 8.050 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FJY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035966. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12094 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1GM0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAF, PEG 3350, PH 7.5, HANGING DROP, REMARK 280 TEMPERATURE 277K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.12000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.74500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.39500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.74500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.12000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.39500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE 2 BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT (CHAINS A & B), WHICH ARE SEPARATED BY REMARK 300 A TRANSLATION OF 0.497 ALONG THE B-AXIS AND 0.051 ALONG THE C-AXIS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 GLU A 3 REMARK 465 VAL A 4 REMARK 465 MET A 5 REMARK 465 LYS A 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 23 CG MET A 23 SD -0.205 REMARK 500 GLU A 31 CD GLU A 31 OE1 0.106 REMARK 500 TYR A 41 CE1 TYR A 41 CZ -0.089 REMARK 500 LYS A 44 CB LYS A 44 CG 0.195 REMARK 500 ARG A 46 CG ARG A 46 CD 0.188 REMARK 500 ARG A 46 CZ ARG A 46 NH2 0.079 REMARK 500 ASP A 63 CB ASP A 63 CG 0.306 REMARK 500 GLN A 89 CG GLN A 89 CD 0.234 REMARK 500 LYS A 124 CE LYS A 124 NZ 0.185 REMARK 500 VAL A 142 CB VAL A 142 CG1 -0.138 REMARK 500 GLN B 2 CB GLN B 2 CG 0.167 REMARK 500 VAL B 4 CA VAL B 4 CB 0.133 REMARK 500 GLU B 18 CD GLU B 18 OE1 -0.093 REMARK 500 GLU B 22 CD GLU B 22 OE2 0.093 REMARK 500 GLU B 31 CD GLU B 31 OE1 0.071 REMARK 500 GLU B 39 CB GLU B 39 CG 0.123 REMARK 500 GLU B 39 CG GLU B 39 CD 0.144 REMARK 500 TYR B 41 CZ TYR B 41 OH 0.114 REMARK 500 GLU B 42 CG GLU B 42 CD 0.107 REMARK 500 LYS B 44 CB LYS B 44 CG 0.168 REMARK 500 MET B 61 SD MET B 61 CE -0.471 REMARK 500 ASP B 63 CB ASP B 63 CG 0.282 REMARK 500 ALA B 77 CA ALA B 77 CB 0.171 REMARK 500 LYS B 78 CD LYS B 78 CE 0.163 REMARK 500 LYS B 79 CD LYS B 79 CE 0.187 REMARK 500 GLN B 89 CG GLN B 89 CD 0.209 REMARK 500 GLN B 89 CD GLN B 89 NE2 0.200 REMARK 500 LYS B 107 CD LYS B 107 CE 0.230 REMARK 500 LYS B 107 CE LYS B 107 NZ 0.265 REMARK 500 ALA B 128 CA ALA B 128 CB 0.128 REMARK 500 VAL B 142 CB VAL B 142 CG1 -0.159 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 8 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 GLU A 31 OE1 - CD - OE2 ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG A 46 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 ASP A 83 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 92 CB - CG - OD1 ANGL. DEV. = 8.7 DEGREES REMARK 500 ASP A 106 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 MET A 131 CG - SD - CE ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP B 17 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 GLU B 39 OE1 - CD - OE2 ANGL. DEV. = -10.8 DEGREES REMARK 500 ARG B 46 NE - CZ - NH2 ANGL. DEV. = 4.9 DEGREES REMARK 500 ASP B 63 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 92 CB - CG - OD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 ASP B 106 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 MET B 131 CG - SD - CE ANGL. DEV. = 10.6 DEGREES REMARK 500 ASP B 132 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 VAL B 133 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 VAL B 135 CG1 - CB - CG2 ANGL. DEV. = -10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 63.91 63.50 REMARK 500 THR A 24 66.62 35.18 REMARK 500 ASN A 72 74.37 -157.50 REMARK 500 ASN A 104 127.40 -173.51 REMARK 500 GLU B 3 -126.05 -146.04 REMARK 500 VAL B 4 60.87 28.40 REMARK 500 LYS B 6 174.66 -42.10 REMARK 500 ASN B 7 94.73 -58.59 REMARK 500 LEU B 8 53.41 105.26 REMARK 500 THR B 24 61.44 37.94 REMARK 500 ASN B 72 74.61 -156.60 REMARK 500 ASP B 83 -167.78 -77.19 REMARK 500 ASN B 104 122.27 -174.46 REMARK 500 REMARK 500 REMARK: NULL DBREF 2FJY A 1 142 UNP P34174 PBP_BOMMO 23 164 DBREF 2FJY B 1 142 UNP P34174 PBP_BOMMO 23 164 SEQRES 1 A 142 SER GLN GLU VAL MET LYS ASN LEU SER LEU ASN PHE GLY SEQRES 2 A 142 LYS ALA LEU ASP GLU CYS LYS LYS GLU MET THR LEU THR SEQRES 3 A 142 ASP ALA ILE ASN GLU ASP PHE TYR ASN PHE TRP LYS GLU SEQRES 4 A 142 GLY TYR GLU ILE LYS ASN ARG GLU THR GLY CYS ALA ILE SEQRES 5 A 142 MET CYS LEU SER THR LYS LEU ASN MET LEU ASP PRO GLU SEQRES 6 A 142 GLY ASN LEU HIS HIS GLY ASN ALA MET GLU PHE ALA LYS SEQRES 7 A 142 LYS HIS GLY ALA ASP GLU THR MET ALA GLN GLN LEU ILE SEQRES 8 A 142 ASP ILE VAL HIS GLY CYS GLU LYS SER THR PRO ALA ASN SEQRES 9 A 142 ASP ASP LYS CYS ILE TRP THR LEU GLY VAL ALA THR CYS SEQRES 10 A 142 PHE LYS ALA GLU ILE HIS LYS LEU ASN TRP ALA PRO SER SEQRES 11 A 142 MET ASP VAL ALA VAL GLY GLU ILE LEU ALA GLU VAL SEQRES 1 B 142 SER GLN GLU VAL MET LYS ASN LEU SER LEU ASN PHE GLY SEQRES 2 B 142 LYS ALA LEU ASP GLU CYS LYS LYS GLU MET THR LEU THR SEQRES 3 B 142 ASP ALA ILE ASN GLU ASP PHE TYR ASN PHE TRP LYS GLU SEQRES 4 B 142 GLY TYR GLU ILE LYS ASN ARG GLU THR GLY CYS ALA ILE SEQRES 5 B 142 MET CYS LEU SER THR LYS LEU ASN MET LEU ASP PRO GLU SEQRES 6 B 142 GLY ASN LEU HIS HIS GLY ASN ALA MET GLU PHE ALA LYS SEQRES 7 B 142 LYS HIS GLY ALA ASP GLU THR MET ALA GLN GLN LEU ILE SEQRES 8 B 142 ASP ILE VAL HIS GLY CYS GLU LYS SER THR PRO ALA ASN SEQRES 9 B 142 ASP ASP LYS CYS ILE TRP THR LEU GLY VAL ALA THR CYS SEQRES 10 B 142 PHE LYS ALA GLU ILE HIS LYS LEU ASN TRP ALA PRO SER SEQRES 11 B 142 MET ASP VAL ALA VAL GLY GLU ILE LEU ALA GLU VAL FORMUL 3 HOH *95(H2 O) HELIX 1 1 PHE A 12 MET A 23 1 12 HELIX 2 2 ALA A 28 PHE A 36 1 9 HELIX 3 3 ASN A 45 SER A 56 1 12 HELIX 4 4 THR A 57 LEU A 62 5 6 HELIX 5 5 ALA A 73 LYS A 79 1 7 HELIX 6 6 ASP A 83 THR A 101 1 19 HELIX 7 7 ASP A 106 HIS A 123 1 18 HELIX 8 8 SER A 130 VAL A 142 1 13 HELIX 9 9 PHE B 12 MET B 23 1 12 HELIX 10 10 ALA B 28 PHE B 36 1 9 HELIX 11 11 ASN B 45 SER B 56 1 12 HELIX 12 12 LYS B 58 ASP B 63 1 6 HELIX 13 13 ALA B 73 LYS B 79 1 7 HELIX 14 14 ASP B 83 THR B 101 1 19 HELIX 15 15 ASP B 106 HIS B 123 1 18 HELIX 16 16 SER B 130 VAL B 142 1 13 SSBOND 1 CYS A 19 CYS A 54 1555 1555 2.11 SSBOND 2 CYS A 50 CYS A 108 1555 1555 2.12 SSBOND 3 CYS A 97 CYS A 117 1555 1555 2.12 SSBOND 4 CYS B 19 CYS B 54 1555 1555 2.09 SSBOND 5 CYS B 50 CYS B 108 1555 1555 2.13 SSBOND 6 CYS B 97 CYS B 117 1555 1555 2.07 CRYST1 54.240 70.790 75.490 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018440 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014130 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013250 0.00000