HEADER LYASE 04-JAN-06 2FK5 TITLE CRYSTAL STRUCTURE OF L-FUCULOSE-1-PHOSPHATE ALDOLASE FROM THERMUS TITLE 2 THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUCULOSE-1-PHOSPHATE ALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CLASS II ALDOLASE PROTEIN; COMPND 5 EC: 4.1.2.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS CLASS II ALDOLASE, METAL BINDING, FUCULOSE PHOSPHATE, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, NPPSFA, NATIONAL KEYWDS 3 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.JEYAKANTHAN,Y.SHIRO,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 2 (RSGI) REVDAT 4 25-OCT-23 2FK5 1 REMARK REVDAT 3 13-JUL-11 2FK5 1 VERSN REVDAT 2 24-JUN-08 2FK5 1 JRNL REMARK DBREF VERSN REVDAT 1 04-JAN-07 2FK5 0 JRNL AUTH J.JEYAKANTHAN,J.TAKA,A.KIKUCHI,C.KUROISHI,K.YUTANI,Y.SHIRO JRNL TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY JRNL TITL 2 CRYSTALLOGRAPHIC STUDY OF THE L-FUCULOSE-1-PHOSPHATE JRNL TITL 3 ALDOLASE (FUCA) FROM THERMUS THERMOPHILUS HB8 JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 61 1075 2005 JRNL REFN ESSN 1744-3091 JRNL PMID 16511238 JRNL DOI 10.1107/S1744309105036766 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 995048.560 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 36132 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1801 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5501 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 315 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2980 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 335 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.14 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.740 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 83.08 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : SO4.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : SO4.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FK5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36580 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1DZW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M LITHIUM SULFATE MONOHYDRATE, 0.1M REMARK 280 NAOH-HEPES, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 100.94400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 100.94400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 100.94400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 100.94400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -140.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 100.94400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 100.94400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 100.94400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 100.94400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -167.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 201.88800 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 100.94400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 100.94400 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -100.94400 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 100.94400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A2003 LIES ON A SPECIAL POSITION. REMARK 375 CL CL B2005 LIES ON A SPECIAL POSITION. REMARK 375 CL CL B2006 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2177 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2157 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 197 REMARK 465 GLY A 198 REMARK 465 GLY A 199 REMARK 465 GLU A 200 REMARK 465 MET B 1 REMARK 465 LEU B 196 REMARK 465 GLY B 197 REMARK 465 GLY B 198 REMARK 465 GLY B 199 REMARK 465 GLU B 200 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 4 NE CZ NH1 REMARK 480 ARG A 10 NH2 REMARK 480 GLN A 19 OE1 NE2 REMARK 480 THR A 25 CG2 REMARK 480 ALA A 26 CB REMARK 480 LYS A 34 CE NZ REMARK 480 GLN A 45 CB REMARK 480 ARG A 48 CG REMARK 480 GLU A 52 CG CD OE1 REMARK 480 LEU A 55 CD1 REMARK 480 GLU A 65 CB CG CD OE1 OE2 REMARK 480 VAL A 72 CG2 REMARK 480 ARG A 92 CD REMARK 480 ARG A 105 NE CZ NH1 NH2 REMARK 480 LEU A 109 CD1 REMARK 480 GLU A 110 CG OE2 REMARK 480 PRO A 123 CB CG REMARK 480 ARG A 141 NH1 REMARK 480 GLU A 142 OE2 REMARK 480 LEU A 148 CD1 REMARK 480 ARG A 149 NH2 REMARK 480 LYS A 159 NZ REMARK 480 GLU A 160 CG CD OE1 OE2 REMARK 480 ARG B 4 CG CD NE CZ NH1 REMARK 480 GLN B 19 NE2 REMARK 480 SER B 23 OG REMARK 480 ALA B 26 CB REMARK 480 ARG B 32 NH2 REMARK 480 LYS B 34 CD CE NZ REMARK 480 GLN B 45 CB REMARK 480 ARG B 48 CG REMARK 480 GLU B 52 CG OE1 REMARK 480 LEU B 55 CD1 REMARK 480 GLU B 60 CD OE1 OE2 REMARK 480 PRO B 62 CG CD REMARK 480 GLU B 65 CG CD OE1 OE2 REMARK 480 VAL B 69 CG1 REMARK 480 VAL B 72 CG2 REMARK 480 ARG B 84 NH1 REMARK 480 ARG B 92 NH1 NH2 REMARK 480 ARG B 105 NE CZ NH1 NH2 REMARK 480 TYR B 114 OH REMARK 480 LYS B 116 CE NZ REMARK 480 LYS B 124 CG CD CE NZ REMARK 480 ARG B 141 CZ NH1 NH2 REMARK 480 GLU B 142 CD OE1 OE2 REMARK 480 ARG B 144 NH1 REMARK 480 LYS B 159 CE NZ REMARK 480 GLU B 160 CB CG CD OE1 OE2 REMARK 480 GLU B 164 OE1 REMARK 480 GLU B 178 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 23 C ALA B 24 N -0.145 REMARK 500 ALA B 24 C THR B 25 N -0.144 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 24 -124.02 46.44 REMARK 500 LYS A 116 -74.81 71.12 REMARK 500 ALA A 128 16.23 56.60 REMARK 500 HIS A 151 -70.26 -114.84 REMARK 500 ALA B 24 -121.15 60.32 REMARK 500 LYS B 116 -72.69 72.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FLF RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN OTHER SPACE GROUP REMARK 900 RELATED ID: TTK003000517.1 RELATED DB: TARGETDB DBREF 2FK5 A 1 200 UNP Q5SHB9 Q5SHB9_THET8 1 200 DBREF 2FK5 B 1 200 UNP Q5SHB9 Q5SHB9_THET8 1 200 SEQRES 1 A 200 MET ARG ALA ARG LEU TYR ALA ALA PHE ARG GLN VAL GLY SEQRES 2 A 200 GLU ASP LEU PHE ALA GLN GLY LEU ILE SER ALA THR ALA SEQRES 3 A 200 GLY ASN PHE SER VAL ARG THR LYS GLY GLY PHE LEU ILE SEQRES 4 A 200 THR LYS SER GLY VAL GLN LYS ALA ARG LEU THR PRO GLU SEQRES 5 A 200 ASP LEU LEU GLU VAL PRO LEU GLU GLY PRO ILE PRO GLU SEQRES 6 A 200 GLY ALA SER VAL GLU SER VAL VAL HIS ARG GLU VAL TYR SEQRES 7 A 200 ARG ARG THR GLY ALA ARG ALA LEU VAL HIS ALA HIS PRO SEQRES 8 A 200 ARG VAL ALA VAL ALA LEU SER PHE HIS LEU SER ARG LEU SEQRES 9 A 200 ARG PRO LEU ASP LEU GLU GLY GLN HIS TYR LEU LYS GLU SEQRES 10 A 200 VAL PRO VAL LEU ALA PRO LYS THR VAL SER ALA THR GLU SEQRES 11 A 200 GLU ALA ALA LEU SER VAL ALA GLU ALA LEU ARG GLU HIS SEQRES 12 A 200 ARG ALA CYS LEU LEU ARG GLY HIS GLY ALA PHE ALA VAL SEQRES 13 A 200 GLY LEU LYS GLU ALA PRO GLU GLU ALA LEU LEU GLU ALA SEQRES 14 A 200 TYR GLY LEU MET THR THR LEU GLU GLU SER ALA GLN ILE SEQRES 15 A 200 LEU LEU TYR HIS ARG LEU TRP GLN GLY ALA GLY PRO ALA SEQRES 16 A 200 LEU GLY GLY GLY GLU SEQRES 1 B 200 MET ARG ALA ARG LEU TYR ALA ALA PHE ARG GLN VAL GLY SEQRES 2 B 200 GLU ASP LEU PHE ALA GLN GLY LEU ILE SER ALA THR ALA SEQRES 3 B 200 GLY ASN PHE SER VAL ARG THR LYS GLY GLY PHE LEU ILE SEQRES 4 B 200 THR LYS SER GLY VAL GLN LYS ALA ARG LEU THR PRO GLU SEQRES 5 B 200 ASP LEU LEU GLU VAL PRO LEU GLU GLY PRO ILE PRO GLU SEQRES 6 B 200 GLY ALA SER VAL GLU SER VAL VAL HIS ARG GLU VAL TYR SEQRES 7 B 200 ARG ARG THR GLY ALA ARG ALA LEU VAL HIS ALA HIS PRO SEQRES 8 B 200 ARG VAL ALA VAL ALA LEU SER PHE HIS LEU SER ARG LEU SEQRES 9 B 200 ARG PRO LEU ASP LEU GLU GLY GLN HIS TYR LEU LYS GLU SEQRES 10 B 200 VAL PRO VAL LEU ALA PRO LYS THR VAL SER ALA THR GLU SEQRES 11 B 200 GLU ALA ALA LEU SER VAL ALA GLU ALA LEU ARG GLU HIS SEQRES 12 B 200 ARG ALA CYS LEU LEU ARG GLY HIS GLY ALA PHE ALA VAL SEQRES 13 B 200 GLY LEU LYS GLU ALA PRO GLU GLU ALA LEU LEU GLU ALA SEQRES 14 B 200 TYR GLY LEU MET THR THR LEU GLU GLU SER ALA GLN ILE SEQRES 15 B 200 LEU LEU TYR HIS ARG LEU TRP GLN GLY ALA GLY PRO ALA SEQRES 16 B 200 LEU GLY GLY GLY GLU HET SO4 A1001 5 HET CL A2003 1 HET SO4 B1002 5 HET CL B2004 1 HET CL B2005 1 HET CL B2006 1 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL 4(CL 1-) FORMUL 9 HOH *335(H2 O) HELIX 1 1 ARG A 2 GLN A 19 1 18 HELIX 2 2 GLN A 45 LEU A 49 5 5 HELIX 3 3 THR A 50 GLU A 52 5 3 HELIX 4 4 GLU A 70 THR A 81 1 12 HELIX 5 5 PRO A 91 PHE A 99 1 9 HELIX 6 6 ASP A 108 LEU A 115 1 8 HELIX 7 7 THR A 129 HIS A 143 1 15 HELIX 8 8 ALA A 161 ALA A 192 1 32 HELIX 9 9 ARG B 2 GLN B 19 1 18 HELIX 10 10 GLN B 45 LEU B 49 5 5 HELIX 11 11 THR B 50 GLU B 52 5 3 HELIX 12 12 GLU B 70 THR B 81 1 12 HELIX 13 13 PRO B 91 PHE B 99 1 9 HELIX 14 14 ASP B 108 LEU B 115 1 8 HELIX 15 15 THR B 129 HIS B 143 1 15 HELIX 16 16 ALA B 161 ALA B 192 1 32 SHEET 1 A 8 LEU A 54 PRO A 58 0 SHEET 2 A 8 GLY A 36 THR A 40 -1 N PHE A 37 O VAL A 57 SHEET 3 A 8 ASN A 28 ARG A 32 -1 N VAL A 31 O LEU A 38 SHEET 4 A 8 ALA A 85 ALA A 89 -1 O HIS A 88 N ASN A 28 SHEET 5 A 8 GLY A 152 GLY A 157 -1 O GLY A 157 N ALA A 85 SHEET 6 A 8 ALA A 145 LEU A 148 -1 N LEU A 148 O GLY A 152 SHEET 7 A 8 VAL A 118 LEU A 121 1 N LEU A 121 O LEU A 147 SHEET 8 A 8 ARG A 103 LEU A 104 -1 N LEU A 104 O VAL A 118 SHEET 1 B 8 LEU B 54 PRO B 58 0 SHEET 2 B 8 GLY B 36 THR B 40 -1 N PHE B 37 O VAL B 57 SHEET 3 B 8 ASN B 28 ARG B 32 -1 N VAL B 31 O LEU B 38 SHEET 4 B 8 ALA B 85 ALA B 89 -1 O HIS B 88 N ASN B 28 SHEET 5 B 8 GLY B 152 GLY B 157 -1 O GLY B 157 N ALA B 85 SHEET 6 B 8 ALA B 145 LEU B 148 -1 N LEU B 148 O GLY B 152 SHEET 7 B 8 VAL B 118 LEU B 121 1 N LEU B 121 O LEU B 147 SHEET 8 B 8 ARG B 103 LEU B 104 -1 N LEU B 104 O VAL B 118 CISPEP 1 GLY A 193 PRO A 194 0 0.47 CISPEP 2 GLY B 193 PRO B 194 0 0.08 SITE 1 AC1 9 THR A 25 GLY A 27 ASN A 28 SER A 42 SITE 2 AC1 9 GLY A 43 LYS A 46 SER A 68 VAL A 69 SITE 3 AC1 9 HOH A2033 SITE 1 AC2 8 THR B 25 GLY B 27 ASN B 28 SER B 42 SITE 2 AC2 8 GLY B 43 SER B 68 VAL B 69 HOH B2019 CRYST1 100.944 100.944 45.870 90.00 90.00 90.00 P 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009906 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021801 0.00000