HEADER TRANSFERASE 04-JAN-06 2FK7 TITLE CRYSTAL STRUCTURE OF HMA (MMAA4) FROM MYCOBACTERIUM TUBERCULOSIS, APO- TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHOXY MYCOLIC ACID SYNTHASE 4; COMPND 3 CHAIN: A; COMPND 4 EC: 2.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MMAA4 (RV0642C); SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.BOISSIER,V.GUILLET,L.MOUREY REVDAT 6 30-AUG-23 2FK7 1 SEQADV REVDAT 5 22-NOV-17 2FK7 1 REMARK REVDAT 4 13-JUL-11 2FK7 1 VERSN REVDAT 3 24-FEB-09 2FK7 1 VERSN REVDAT 2 04-APR-06 2FK7 1 JRNL REVDAT 1 17-JAN-06 2FK7 0 JRNL AUTH F.BOISSIER,F.BARDOU,V.GUILLET,S.UTTENWEILER-JOSEPH,M.DAFFE, JRNL AUTH 2 A.QUEMARD,L.MOUREY JRNL TITL FURTHER INSIGHT INTO S-ADENOSYLMETHIONINE-DEPENDENT JRNL TITL 2 METHYLTRANSFERASES: STRUCTURAL CHARACTERIZATION OF HMA, AN JRNL TITL 3 ENZYME ESSENTIAL FOR THE BIOSYNTHESIS OF OXYGENATED MYCOLIC JRNL TITL 4 ACIDS IN MYCOBACTERIUM TUBERCULOSIS. JRNL REF J.BIOL.CHEM. V. 281 4434 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16356931 JRNL DOI 10.1074/JBC.M510250200 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 21535 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1173 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1570 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2218 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 42.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.55000 REMARK 3 B22 (A**2) : 0.55000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.185 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.165 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.445 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2271 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3076 ; 1.736 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 275 ; 5.854 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;30.047 ;23.482 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 378 ;13.795 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;23.723 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 333 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1749 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1044 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1564 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 139 ; 0.123 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.111 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.235 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1448 ; 1.176 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2227 ; 1.636 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 972 ; 2.788 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 849 ; 3.950 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4802 7.9661 16.6698 REMARK 3 T TENSOR REMARK 3 T11: -0.2665 T22: -0.3381 REMARK 3 T33: -0.3243 T12: -0.0280 REMARK 3 T13: -0.0105 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 1.1806 L22: 2.7730 REMARK 3 L33: 3.6220 L12: -0.2999 REMARK 3 L13: -0.5293 L23: 0.1309 REMARK 3 S TENSOR REMARK 3 S11: -0.1961 S12: -0.0416 S13: 0.1041 REMARK 3 S21: -0.1965 S22: 0.3472 S23: -0.1513 REMARK 3 S31: -0.4255 S32: -0.1731 S33: -0.1511 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FK7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035975. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931000 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22776 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 44.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.18600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1KP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4-28% PEG 3350, PH 5.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 285.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.74000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 137.48000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 137.48000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.74000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE MONOMER FOUND IN THE REMARK 300 ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -16 REMARK 465 GLY A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 TYR A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 SER A -6 REMARK 465 SER A -5 REMARK 465 GLY A -4 REMARK 465 LEU A -3 REMARK 465 VAL A -2 REMARK 465 PRO A -1 REMARK 465 ARG A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 7 REMARK 465 PRO A 8 REMARK 465 ILE A 9 REMARK 465 SER A 10 REMARK 465 PRO A 11 REMARK 465 THR A 12 REMARK 465 LYS A 13 REMARK 465 THR A 14 REMARK 465 ARG A 15 REMARK 465 THR A 16 REMARK 465 ARG A 17 REMARK 465 PHE A 18 REMARK 465 GLU A 19 REMARK 465 ASP A 20 REMARK 465 ILE A 21 REMARK 465 PHE A 151 REMARK 465 GLY A 152 REMARK 465 HIS A 153 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 GLU A 149 CG CD OE1 OE2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 LYS A 258 CG CD CE NZ REMARK 470 GLU A 261 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 189 CG ARG A 189 CD 0.188 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 90 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 90 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 189 CD - NE - CZ ANGL. DEV. = 9.8 DEGREES REMARK 500 ARG A 189 NE - CZ - NH1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 189 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 199 CG - CD - NE ANGL. DEV. = -16.5 DEGREES REMARK 500 ARG A 199 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 199 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 42 53.66 -106.57 REMARK 500 ALA A 136 43.25 -146.10 REMARK 500 PHE A 209 73.43 -117.50 REMARK 500 THR A 263 -92.77 -129.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KP9 RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1, APO-FORM REMARK 900 RELATED ID: 1KPI RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA2 COMPLEXED WITH SAH AND REMARK 900 DDDMAB REMARK 900 RELATED ID: 1L1E RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE PCAA COMPLEXED WITH SAH REMARK 900 RELATED ID: 1TPY RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE MMAA2 COMPLEXED WITH SAH AND CTAB REMARK 900 RELATED ID: 2FK8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HMA (MMAA4) FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 COMPLEXED WITH S-ADENOSYLMETHIONINE REMARK 900 RELATED ID: 1KPG RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1, COMPLEXED WITH SAH AND REMARK 900 CTAB REMARK 900 RELATED ID: 1KPH RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1, COMPLEXED WITH SAH AND REMARK 900 DDDMAB DBREF 2FK7 A 4 301 GB 13880191 AAK44896 18 315 SEQADV 2FK7 MET A -16 GB 13880191 EXPRESSION TAG SEQADV 2FK7 GLY A -15 GB 13880191 EXPRESSION TAG SEQADV 2FK7 SER A -14 GB 13880191 EXPRESSION TAG SEQADV 2FK7 SER A -13 GB 13880191 EXPRESSION TAG SEQADV 2FK7 HIS A -12 GB 13880191 EXPRESSION TAG SEQADV 2FK7 TYR A -11 GB 13880191 EXPRESSION TAG SEQADV 2FK7 HIS A -10 GB 13880191 EXPRESSION TAG SEQADV 2FK7 HIS A -9 GB 13880191 EXPRESSION TAG SEQADV 2FK7 HIS A -8 GB 13880191 EXPRESSION TAG SEQADV 2FK7 HIS A -7 GB 13880191 EXPRESSION TAG SEQADV 2FK7 SER A -6 GB 13880191 EXPRESSION TAG SEQADV 2FK7 SER A -5 GB 13880191 EXPRESSION TAG SEQADV 2FK7 GLY A -4 GB 13880191 EXPRESSION TAG SEQADV 2FK7 LEU A -3 GB 13880191 EXPRESSION TAG SEQADV 2FK7 VAL A -2 GB 13880191 EXPRESSION TAG SEQADV 2FK7 PRO A -1 GB 13880191 EXPRESSION TAG SEQADV 2FK7 ARG A 0 GB 13880191 EXPRESSION TAG SEQADV 2FK7 GLY A 1 GB 13880191 EXPRESSION TAG SEQADV 2FK7 SER A 2 GB 13880191 EXPRESSION TAG SEQADV 2FK7 HIS A 3 GB 13880191 EXPRESSION TAG SEQRES 1 A 318 MET GLY SER SER HIS TYR HIS HIS HIS HIS SER SER GLY SEQRES 2 A 318 LEU VAL PRO ARG GLY SER HIS MET ALA GLU LYS PRO ILE SEQRES 3 A 318 SER PRO THR LYS THR ARG THR ARG PHE GLU ASP ILE GLN SEQRES 4 A 318 ALA HIS TYR ASP VAL SER ASP ASP PHE PHE ALA LEU PHE SEQRES 5 A 318 GLN ASP PRO THR ARG THR TYR SER CYS ALA TYR PHE GLU SEQRES 6 A 318 PRO PRO GLU LEU THR LEU GLU GLU ALA GLN TYR ALA LYS SEQRES 7 A 318 VAL ASP LEU ASN LEU ASP LYS LEU ASP LEU LYS PRO GLY SEQRES 8 A 318 MET THR LEU LEU ASP ILE GLY CYS GLY TRP GLY THR THR SEQRES 9 A 318 MET ARG ARG ALA VAL GLU ARG PHE ASP VAL ASN VAL ILE SEQRES 10 A 318 GLY LEU THR LEU SER LYS ASN GLN HIS ALA ARG CYS GLU SEQRES 11 A 318 GLN VAL LEU ALA SER ILE ASP THR ASN ARG SER ARG GLN SEQRES 12 A 318 VAL LEU LEU GLN GLY TRP GLU ASP PHE ALA GLU PRO VAL SEQRES 13 A 318 ASP ARG ILE VAL SER ILE GLU ALA PHE GLU HIS PHE GLY SEQRES 14 A 318 HIS GLU ASN TYR ASP ASP PHE PHE LYS ARG CYS PHE ASN SEQRES 15 A 318 ILE MET PRO ALA ASP GLY ARG MET THR VAL GLN SER SER SEQRES 16 A 318 VAL SER TYR HIS PRO TYR GLU MET ALA ALA ARG GLY LYS SEQRES 17 A 318 LYS LEU SER PHE GLU THR ALA ARG PHE ILE LYS PHE ILE SEQRES 18 A 318 VAL THR GLU ILE PHE PRO GLY GLY ARG LEU PRO SER THR SEQRES 19 A 318 GLU MET MET VAL GLU HIS GLY GLU LYS ALA GLY PHE THR SEQRES 20 A 318 VAL PRO GLU PRO LEU SER LEU ARG PRO HIS TYR ILE LYS SEQRES 21 A 318 THR LEU ARG ILE TRP GLY ASP THR LEU GLN SER ASN LYS SEQRES 22 A 318 ASP LYS ALA ILE GLU VAL THR SER GLU GLU VAL TYR ASN SEQRES 23 A 318 ARG TYR MET LYS TYR LEU ARG GLY CYS GLU HIS TYR PHE SEQRES 24 A 318 THR ASP GLU MET LEU ASP CYS SER LEU VAL THR TYR LEU SEQRES 25 A 318 LYS PRO GLY ALA ALA ALA FORMUL 2 HOH *124(H2 O) HELIX 1 1 SER A 28 ALA A 33 1 6 HELIX 2 2 THR A 53 LYS A 68 1 16 HELIX 3 3 GLY A 85 ASP A 96 1 12 HELIX 4 4 SER A 105 SER A 118 1 14 HELIX 5 5 GLY A 131 PHE A 135 5 5 HELIX 6 6 ASN A 155 MET A 167 1 13 HELIX 7 7 HIS A 182 ARG A 189 1 8 HELIX 8 8 GLY A 190 ILE A 208 1 19 HELIX 9 9 SER A 216 GLY A 228 1 13 HELIX 10 10 LEU A 237 ASN A 255 1 19 HELIX 11 11 ASN A 255 THR A 263 1 9 HELIX 12 12 SER A 264 ASP A 284 1 21 SHEET 1 A 7 ARG A 125 LEU A 129 0 SHEET 2 A 7 ASN A 98 THR A 103 1 N GLY A 101 O LEU A 128 SHEET 3 A 7 THR A 76 ILE A 80 1 N ASP A 79 O ILE A 100 SHEET 4 A 7 ARG A 141 ILE A 145 1 O VAL A 143 N LEU A 78 SHEET 5 A 7 ARG A 172 VAL A 179 1 O GLN A 176 N SER A 144 SHEET 6 A 7 ASP A 288 LEU A 295 -1 O TYR A 294 N MET A 173 SHEET 7 A 7 LEU A 235 SER A 236 -1 N LEU A 235 O LEU A 291 CISPEP 1 GLU A 48 PRO A 49 0 -0.29 CRYST1 56.715 56.715 206.220 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017632 0.010180 0.000000 0.00000 SCALE2 0.000000 0.020360 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004849 0.00000