HEADER TRANSFERASE 04-JAN-06 2FK8 TITLE CRYSTAL STRUCTURE OF HMA (MMAA4) FROM MYCOBACTERIUM TUBERCULOSIS TITLE 2 COMPLEXED WITH S-ADENOSYLMETHIONINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHOXY MYCOLIC ACID SYNTHASE 4; COMPND 3 CHAIN: A; COMPND 4 EC: 2.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MMAA4 (RV0642C); SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.BOISSIER,V.GUILLET,L.MOUREY REVDAT 5 30-AUG-23 2FK8 1 REMARK SEQADV REVDAT 4 13-JUL-11 2FK8 1 VERSN REVDAT 3 24-FEB-09 2FK8 1 VERSN REVDAT 2 04-APR-06 2FK8 1 JRNL REVDAT 1 17-JAN-06 2FK8 0 JRNL AUTH F.BOISSIER,F.BARDOU,V.GUILLET,S.UTTENWEILER-JOSEPH,M.DAFFE, JRNL AUTH 2 A.QUEMARD,L.MOUREY JRNL TITL FURTHER INSIGHT INTO S-ADENOSYLMETHIONINE-DEPENDENT JRNL TITL 2 METHYLTRANSFERASES: STRUCTURAL CHARACTERIZATION OF HMA, AN JRNL TITL 3 ENZYME ESSENTIAL FOR THE BIOSYNTHESIS OF OXYGENATED MYCOLIC JRNL TITL 4 ACIDS IN MYCOBACTERIUM TUBERCULOSIS. JRNL REF J.BIOL.CHEM. V. 281 4434 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16356931 JRNL DOI 10.1074/JBC.M510250200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 24184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1302 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1482 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2236 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 30.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : -0.78000 REMARK 3 B12 (A**2) : 0.26000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.150 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.911 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2319 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3146 ; 1.539 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 5.550 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;33.269 ;23.540 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 376 ;13.197 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;21.181 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1787 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1063 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1590 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 136 ; 0.170 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.202 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1454 ; 0.975 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2263 ; 1.489 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1000 ; 2.566 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 883 ; 3.916 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1462 -4.9533 16.7397 REMARK 3 T TENSOR REMARK 3 T11: -0.1101 T22: -0.1127 REMARK 3 T33: -0.0881 T12: -0.0615 REMARK 3 T13: -0.0032 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.9274 L22: 1.4665 REMARK 3 L33: 1.7997 L12: 0.1372 REMARK 3 L13: 0.0944 L23: -0.3333 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: -0.1336 S13: -0.0938 REMARK 3 S21: 0.0704 S22: 0.0546 S23: -0.0361 REMARK 3 S31: 0.1114 S32: -0.0829 S33: -0.0704 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FK8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979171 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) OR REMARK 200 SI(311) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25549 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 4.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.22300 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2FK7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4-28% PEG 3350, PH 5.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 285.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.34500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 132.69000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 132.69000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 66.34500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE MONOMER FOUND IN THE REMARK 300 ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -16 REMARK 465 GLY A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 TYR A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 SER A -6 REMARK 465 SER A -5 REMARK 465 GLY A -4 REMARK 465 LEU A -3 REMARK 465 VAL A -2 REMARK 465 PRO A -1 REMARK 465 ARG A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 7 REMARK 465 PRO A 8 REMARK 465 ILE A 9 REMARK 465 SER A 10 REMARK 465 PRO A 11 REMARK 465 THR A 12 REMARK 465 LYS A 13 REMARK 465 THR A 14 REMARK 465 ARG A 15 REMARK 465 THR A 16 REMARK 465 ARG A 17 REMARK 465 PHE A 18 REMARK 465 GLU A 19 REMARK 465 ASP A 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 21 CG1 CG2 CD1 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 HIS A 182 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 184 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 GLU A 261 CG CD OE1 OE2 REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 90 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 90 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 125 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 125 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 199 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 199 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 42 63.72 -114.70 REMARK 500 ALA A 136 58.06 -143.97 REMARK 500 THR A 263 -101.88 -131.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FK7 RELATED DB: PDB REMARK 900 HMA (MMAA4), APO-FORM REMARK 900 RELATED ID: 1KP9 RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1, APO-FORM REMARK 900 RELATED ID: 1KPG RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1, COMPLEXED WITH SAH AND REMARK 900 CTAB REMARK 900 RELATED ID: 1KPH RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA1, APO-FORM AND COMPLEXED REMARK 900 WITH DDDMAB REMARK 900 RELATED ID: 1KPI RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE CMAA2 COMPLEXED WITH SAH AND REMARK 900 DDDMAB REMARK 900 RELATED ID: 1L1E RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE PCAA COMPLEXED WITH SAH REMARK 900 RELATED ID: 1TPY RELATED DB: PDB REMARK 900 MYCOLIC ACID CYCLOPROPANE SYNTHASE MMAA2 COMPLEXED WITH SAH AND CTAB DBREF 2FK8 A 4 301 GB 13880191 AAK44896 18 315 SEQADV 2FK8 MET A -16 GB 13880191 EXPRESSION TAG SEQADV 2FK8 GLY A -15 GB 13880191 EXPRESSION TAG SEQADV 2FK8 SER A -14 GB 13880191 EXPRESSION TAG SEQADV 2FK8 SER A -13 GB 13880191 EXPRESSION TAG SEQADV 2FK8 HIS A -12 GB 13880191 EXPRESSION TAG SEQADV 2FK8 TYR A -11 GB 13880191 EXPRESSION TAG SEQADV 2FK8 HIS A -10 GB 13880191 EXPRESSION TAG SEQADV 2FK8 HIS A -9 GB 13880191 EXPRESSION TAG SEQADV 2FK8 HIS A -8 GB 13880191 EXPRESSION TAG SEQADV 2FK8 HIS A -7 GB 13880191 EXPRESSION TAG SEQADV 2FK8 SER A -6 GB 13880191 EXPRESSION TAG SEQADV 2FK8 SER A -5 GB 13880191 EXPRESSION TAG SEQADV 2FK8 GLY A -4 GB 13880191 EXPRESSION TAG SEQADV 2FK8 LEU A -3 GB 13880191 EXPRESSION TAG SEQADV 2FK8 VAL A -2 GB 13880191 EXPRESSION TAG SEQADV 2FK8 PRO A -1 GB 13880191 EXPRESSION TAG SEQADV 2FK8 ARG A 0 GB 13880191 EXPRESSION TAG SEQADV 2FK8 GLY A 1 GB 13880191 EXPRESSION TAG SEQADV 2FK8 SER A 2 GB 13880191 EXPRESSION TAG SEQADV 2FK8 HIS A 3 GB 13880191 EXPRESSION TAG SEQRES 1 A 318 MET GLY SER SER HIS TYR HIS HIS HIS HIS SER SER GLY SEQRES 2 A 318 LEU VAL PRO ARG GLY SER HIS MET ALA GLU LYS PRO ILE SEQRES 3 A 318 SER PRO THR LYS THR ARG THR ARG PHE GLU ASP ILE GLN SEQRES 4 A 318 ALA HIS TYR ASP VAL SER ASP ASP PHE PHE ALA LEU PHE SEQRES 5 A 318 GLN ASP PRO THR ARG THR TYR SER CYS ALA TYR PHE GLU SEQRES 6 A 318 PRO PRO GLU LEU THR LEU GLU GLU ALA GLN TYR ALA LYS SEQRES 7 A 318 VAL ASP LEU ASN LEU ASP LYS LEU ASP LEU LYS PRO GLY SEQRES 8 A 318 MET THR LEU LEU ASP ILE GLY CYS GLY TRP GLY THR THR SEQRES 9 A 318 MET ARG ARG ALA VAL GLU ARG PHE ASP VAL ASN VAL ILE SEQRES 10 A 318 GLY LEU THR LEU SER LYS ASN GLN HIS ALA ARG CYS GLU SEQRES 11 A 318 GLN VAL LEU ALA SER ILE ASP THR ASN ARG SER ARG GLN SEQRES 12 A 318 VAL LEU LEU GLN GLY TRP GLU ASP PHE ALA GLU PRO VAL SEQRES 13 A 318 ASP ARG ILE VAL SER ILE GLU ALA PHE GLU HIS PHE GLY SEQRES 14 A 318 HIS GLU ASN TYR ASP ASP PHE PHE LYS ARG CYS PHE ASN SEQRES 15 A 318 ILE MET PRO ALA ASP GLY ARG MET THR VAL GLN SER SER SEQRES 16 A 318 VAL SER TYR HIS PRO TYR GLU MET ALA ALA ARG GLY LYS SEQRES 17 A 318 LYS LEU SER PHE GLU THR ALA ARG PHE ILE LYS PHE ILE SEQRES 18 A 318 VAL THR GLU ILE PHE PRO GLY GLY ARG LEU PRO SER THR SEQRES 19 A 318 GLU MET MET VAL GLU HIS GLY GLU LYS ALA GLY PHE THR SEQRES 20 A 318 VAL PRO GLU PRO LEU SER LEU ARG PRO HIS TYR ILE LYS SEQRES 21 A 318 THR LEU ARG ILE TRP GLY ASP THR LEU GLN SER ASN LYS SEQRES 22 A 318 ASP LYS ALA ILE GLU VAL THR SER GLU GLU VAL TYR ASN SEQRES 23 A 318 ARG TYR MET LYS TYR LEU ARG GLY CYS GLU HIS TYR PHE SEQRES 24 A 318 THR ASP GLU MET LEU ASP CYS SER LEU VAL THR TYR LEU SEQRES 25 A 318 LYS PRO GLY ALA ALA ALA HET SAM A 302 27 HETNAM SAM S-ADENOSYLMETHIONINE FORMUL 2 SAM C15 H22 N6 O5 S FORMUL 3 HOH *153(H2 O) HELIX 1 1 ILE A 21 ASP A 26 5 6 HELIX 2 2 SER A 28 ALA A 33 1 6 HELIX 3 3 THR A 53 ASP A 67 1 15 HELIX 4 4 GLY A 85 ASP A 96 1 12 HELIX 5 5 SER A 105 SER A 118 1 14 HELIX 6 6 GLY A 131 PHE A 135 5 5 HELIX 7 7 ALA A 147 PHE A 151 5 5 HELIX 8 8 GLY A 152 GLU A 154 5 3 HELIX 9 9 ASN A 155 MET A 167 1 13 HELIX 10 10 HIS A 182 ALA A 188 1 7 HELIX 11 11 GLY A 190 ILE A 208 1 19 HELIX 12 12 SER A 216 ALA A 227 1 12 HELIX 13 13 LEU A 237 ASN A 255 1 19 HELIX 14 14 ASN A 255 THR A 263 1 9 HELIX 15 15 SER A 264 ASP A 284 1 21 SHEET 1 A 7 ARG A 125 LEU A 129 0 SHEET 2 A 7 ASN A 98 THR A 103 1 N GLY A 101 O LEU A 128 SHEET 3 A 7 THR A 76 ILE A 80 1 N ASP A 79 O ILE A 100 SHEET 4 A 7 ARG A 141 ILE A 145 1 O VAL A 143 N LEU A 78 SHEET 5 A 7 ARG A 172 VAL A 179 1 O GLN A 176 N SER A 144 SHEET 6 A 7 ASP A 288 LEU A 295 -1 O VAL A 292 N VAL A 175 SHEET 7 A 7 LEU A 235 SER A 236 -1 N LEU A 235 O LEU A 291 CISPEP 1 GLU A 48 PRO A 49 0 5.35 SITE 1 AC1 21 THR A 41 TYR A 42 SER A 43 GLY A 81 SITE 2 AC1 21 GLY A 83 THR A 103 LEU A 104 GLN A 108 SITE 3 AC1 21 GLY A 131 TRP A 132 GLU A 133 ILE A 145 SITE 4 AC1 21 GLU A 146 ALA A 147 HIS A 150 HOH A 307 SITE 5 AC1 21 HOH A 317 HOH A 343 HOH A 375 HOH A 443 SITE 6 AC1 21 HOH A 454 CRYST1 56.779 56.779 199.035 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017612 0.010168 0.000000 0.00000 SCALE2 0.000000 0.020337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005024 0.00000