data_2FOL # _entry.id 2FOL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FOL pdb_00002fol 10.2210/pdb2fol/pdb RCSB RCSB036123 ? ? WWPDB D_1000036123 ? ? # _pdbx_database_status.entry_id 2FOL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-01-13 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, J.' 1 'Tempel, W.' 2 'Shen, Y.' 3 'Shen, L.' 4 'Arrowsmith, C.' 5 'Edwards, A.' 6 'Sundstrom, M.' 7 'Weigelt, J.' 8 'Bochkarev, A.' 9 'Park, H.' 10 'Structural Genomics Consortium (SGC)' 11 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of human RAB1A in complex with GDP' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'Real-Space Protein-Model Completion: an Inverse-Kinematics Approach.' 'Acta Crystallogr.,Sect.D' 61 2 13 2005 ABCRE6 DK 0907-4449 0766 ? 15608370 10.1107/S0907444904025697 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, J.' 1 ? primary 'Tempel, W.' 2 ? primary 'Shen, Y.' 3 ? primary 'Shen, L.' 4 ? primary 'Arrowsmith, C.' 5 ? primary 'Edwards, A.' 6 ? primary 'Sundstrom, M.' 7 ? primary 'Weigelt, J.' 8 ? primary 'Bochkarev, A.' 9 ? primary 'Park, H.' 10 ? primary 'Structural Genomics Consortium (SGC)' 11 ? 1 'van den Bedem, H.' 12 ? 1 'Lotan, I.' 13 ? 1 'Latombe, J.-C.' 14 ? 1 'Deacon, A.M.' 15 ? # _cell.length_a 75.790 _cell.length_b 75.790 _cell.length_c 49.080 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.entry_id 2FOL _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.Int_Tables_number 154 _symmetry.entry_id 2FOL _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-1A' 21567.354 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 2 ? ? ? ? 5 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'YPT1-related protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSL GIPFLETSAKNATNVEQSFMTMAAEIKKRMG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSL GIPFLETSAKNATNVEQSFMTMAAEIKKRMG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 PRO n 1 21 GLU n 1 22 TYR n 1 23 ASP n 1 24 TYR n 1 25 LEU n 1 26 PHE n 1 27 LYS n 1 28 LEU n 1 29 LEU n 1 30 LEU n 1 31 ILE n 1 32 GLY n 1 33 ASP n 1 34 SER n 1 35 GLY n 1 36 VAL n 1 37 GLY n 1 38 LYS n 1 39 SER n 1 40 CYS n 1 41 LEU n 1 42 LEU n 1 43 LEU n 1 44 ARG n 1 45 PHE n 1 46 ALA n 1 47 ASP n 1 48 ASP n 1 49 THR n 1 50 TYR n 1 51 THR n 1 52 GLU n 1 53 SER n 1 54 TYR n 1 55 ILE n 1 56 SER n 1 57 THR n 1 58 ILE n 1 59 GLY n 1 60 VAL n 1 61 ASP n 1 62 PHE n 1 63 LYS n 1 64 ILE n 1 65 ARG n 1 66 THR n 1 67 ILE n 1 68 GLU n 1 69 LEU n 1 70 ASP n 1 71 GLY n 1 72 LYS n 1 73 THR n 1 74 ILE n 1 75 LYS n 1 76 LEU n 1 77 GLN n 1 78 ILE n 1 79 TRP n 1 80 ASP n 1 81 THR n 1 82 ALA n 1 83 GLY n 1 84 GLN n 1 85 GLU n 1 86 ARG n 1 87 PHE n 1 88 ARG n 1 89 THR n 1 90 ILE n 1 91 THR n 1 92 SER n 1 93 SER n 1 94 TYR n 1 95 TYR n 1 96 ARG n 1 97 GLY n 1 98 ALA n 1 99 HIS n 1 100 GLY n 1 101 ILE n 1 102 ILE n 1 103 VAL n 1 104 VAL n 1 105 TYR n 1 106 ASP n 1 107 VAL n 1 108 THR n 1 109 ASP n 1 110 GLN n 1 111 GLU n 1 112 SER n 1 113 PHE n 1 114 ASN n 1 115 ASN n 1 116 VAL n 1 117 LYS n 1 118 GLN n 1 119 TRP n 1 120 LEU n 1 121 GLN n 1 122 GLU n 1 123 ILE n 1 124 ASP n 1 125 ARG n 1 126 TYR n 1 127 ALA n 1 128 SER n 1 129 GLU n 1 130 ASN n 1 131 VAL n 1 132 ASN n 1 133 LYS n 1 134 LEU n 1 135 LEU n 1 136 VAL n 1 137 GLY n 1 138 ASN n 1 139 LYS n 1 140 CYS n 1 141 ASP n 1 142 LEU n 1 143 THR n 1 144 THR n 1 145 LYS n 1 146 LYS n 1 147 VAL n 1 148 VAL n 1 149 ASP n 1 150 TYR n 1 151 THR n 1 152 THR n 1 153 ALA n 1 154 LYS n 1 155 GLU n 1 156 PHE n 1 157 ALA n 1 158 ASP n 1 159 SER n 1 160 LEU n 1 161 GLY n 1 162 ILE n 1 163 PRO n 1 164 PHE n 1 165 LEU n 1 166 GLU n 1 167 THR n 1 168 SER n 1 169 ALA n 1 170 LYS n 1 171 ASN n 1 172 ALA n 1 173 THR n 1 174 ASN n 1 175 VAL n 1 176 GLU n 1 177 GLN n 1 178 SER n 1 179 PHE n 1 180 MET n 1 181 THR n 1 182 MET n 1 183 ALA n 1 184 ALA n 1 185 GLU n 1 186 ILE n 1 187 LYS n 1 188 LYS n 1 189 ARG n 1 190 MET n 1 191 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RAB1A, RAB1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus (DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB1A_HUMAN _struct_ref.pdbx_db_accession P62820 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAH GIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSF MTMAAEIKKRMG ; _struct_ref.pdbx_align_begin 5 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2FOL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P62820 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 176 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2FOL MET A 1 ? UNP P62820 ? ? 'cloning artifact' -16 1 1 2FOL GLY A 2 ? UNP P62820 ? ? 'cloning artifact' -15 2 1 2FOL SER A 3 ? UNP P62820 ? ? 'cloning artifact' -14 3 1 2FOL SER A 4 ? UNP P62820 ? ? 'cloning artifact' -13 4 1 2FOL HIS A 5 ? UNP P62820 ? ? 'expression tag' -12 5 1 2FOL HIS A 6 ? UNP P62820 ? ? 'expression tag' -11 6 1 2FOL HIS A 7 ? UNP P62820 ? ? 'expression tag' -10 7 1 2FOL HIS A 8 ? UNP P62820 ? ? 'expression tag' -9 8 1 2FOL HIS A 9 ? UNP P62820 ? ? 'expression tag' -8 9 1 2FOL HIS A 10 ? UNP P62820 ? ? 'expression tag' -7 10 1 2FOL SER A 11 ? UNP P62820 ? ? 'cloning artifact' -6 11 1 2FOL SER A 12 ? UNP P62820 ? ? 'cloning artifact' -5 12 1 2FOL GLY A 13 ? UNP P62820 ? ? 'cloning artifact' -4 13 1 2FOL LEU A 14 ? UNP P62820 ? ? 'cloning artifact' -3 14 1 2FOL VAL A 15 ? UNP P62820 ? ? 'cloning artifact' -2 15 1 2FOL PRO A 16 ? UNP P62820 ? ? 'cloning artifact' -1 16 1 2FOL ARG A 17 ? UNP P62820 ? ? 'cloning artifact' 0 17 1 2FOL GLY A 18 ? UNP P62820 ? ? 'cloning artifact' 1 18 1 2FOL SER A 19 ? UNP P62820 ? ? 'cloning artifact' 2 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2FOL # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 46.5 _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '25% PEG3350, 0.2M magnesium chloride, 0.1M Tris, pH 8.5, vapor diffusion, sitting drop, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2006-01-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2FOL _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 2.62 _reflns.number_obs 5102 _reflns.percent_possible_obs 100.000 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_chi_squared 1.022 _reflns.pdbx_redundancy 10.600 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_all _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.71 2.62 494 100.000 0.826 0.544 10.500 ? ? ? ? ? ? 1 1 2.82 2.71 509 100.000 0.644 0.510 10.700 ? ? ? ? ? ? 2 1 2.95 2.82 493 100.000 0.423 0.580 10.800 ? ? ? ? ? ? 3 1 3.11 2.95 502 100.000 0.288 0.644 10.800 ? ? ? ? ? ? 4 1 3.30 3.11 509 100.000 0.201 0.766 10.800 ? ? ? ? ? ? 5 1 3.55 3.30 500 100.000 0.135 1.004 10.800 ? ? ? ? ? ? 6 1 3.91 3.55 508 100.000 0.097 1.321 10.700 ? ? ? ? ? ? 7 1 4.48 3.91 518 100.000 0.067 1.487 10.700 ? ? ? ? ? ? 8 1 5.63 4.48 519 100.000 0.055 1.633 10.600 ? ? ? ? ? ? 9 1 30.00 5.63 550 99.800 0.034 1.689 10.000 ? ? ? ? ? ? 10 1 # _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.B_iso_mean 36.747 _refine.aniso_B[1][1] -0.603 _refine.aniso_B[2][2] -0.603 _refine.aniso_B[3][3] 0.905 _refine.aniso_B[1][2] -0.302 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_d_res_high 2.631 _refine.ls_d_res_low 30.000 _refine.ls_number_reflns_R_free 233 _refine.ls_number_reflns_obs 5048 _refine.ls_R_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.2523 _refine.ls_R_factor_all 0.201 _refine.ls_wR_factor_R_work 0.167 _refine.ls_wR_factor_R_free 0.223 _refine.ls_percent_reflns_obs 99.980 _refine.ls_percent_reflns_R_free 4.616 _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.347 _refine.overall_SU_ML 0.302 _refine.overall_SU_B 32.488 _refine.entry_id 2FOL _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entries 1YZN, 1UKV' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1240 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 1276 _refine_hist.d_res_high 2.631 _refine_hist.d_res_low 30.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1289 0.019 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 852 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1745 1.397 1.988 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2087 0.797 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 153 4.754 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 38.020 25.088 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 235 16.052 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 24.925 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 201 0.075 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1386 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 257 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 302 0.223 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 879 0.209 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 615 0.191 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 655 0.097 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 66 0.190 0.500 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 1 0.137 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 14 0.167 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 26 0.277 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 2 0.227 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 994 0.459 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 317 0.069 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1237 0.599 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_other 1019 0.268 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 640 0.990 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_other 766 0.287 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 508 1.662 4.500 ? 'X-RAY DIFFRACTION' ? r_scangle_other 1068 0.753 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 20 2.699 2.631 369 100.000 356 0.406 0.405 13 0.396 . . . . 'X-RAY DIFFRACTION' 20 2.772 2.699 342 100.000 324 0.342 0.337 18 0.251 . . . . 'X-RAY DIFFRACTION' 20 2.852 2.772 357 100.000 343 0.336 0.334 14 0.282 . . . . 'X-RAY DIFFRACTION' 20 2.938 2.852 330 100.000 312 0.304 0.303 18 0.278 . . . . 'X-RAY DIFFRACTION' 20 3.034 2.938 335 100.000 315 0.263 0.265 20 0.301 . . . . 'X-RAY DIFFRACTION' 20 3.139 3.034 310 100.000 292 0.276 0.284 18 0.407 . . . . 'X-RAY DIFFRACTION' 20 3.256 3.139 301 100.000 293 0.25 0.249 8 0.225 . . . . 'X-RAY DIFFRACTION' 20 3.388 3.256 290 100.000 277 0.204 0.204 13 0.213 . . . . 'X-RAY DIFFRACTION' 20 3.536 3.388 289 100.000 276 0.219 0.221 13 0.256 . . . . 'X-RAY DIFFRACTION' 20 3.706 3.536 271 100.000 258 0.201 0.207 13 0.322 . . . . 'X-RAY DIFFRACTION' 20 3.903 3.706 264 100.000 249 0.188 0.191 15 0.245 . . . . 'X-RAY DIFFRACTION' 20 4.136 3.903 251 100.000 241 0.183 0.183 10 0.185 . . . . 'X-RAY DIFFRACTION' 20 4.415 4.136 222 100.000 210 0.14 0.142 12 0.173 . . . . 'X-RAY DIFFRACTION' 20 4.761 4.415 227 100.000 214 0.127 0.131 13 0.183 . . . . 'X-RAY DIFFRACTION' 20 5.202 4.761 193 100.000 184 0.158 0.165 9 0.31 . . . . 'X-RAY DIFFRACTION' 20 5.794 5.202 187 100.000 178 0.173 0.178 9 0.275 . . . . 'X-RAY DIFFRACTION' 20 6.649 5.794 166 100.000 159 0.167 0.171 7 0.288 . . . . 'X-RAY DIFFRACTION' 20 8.046 6.649 145 100.000 140 0.186 0.189 5 0.275 . . . . 'X-RAY DIFFRACTION' 20 10.990 8.046 119 100.000 116 0.122 0.124 3 0.34 . . . . 'X-RAY DIFFRACTION' 20 30.000 10.990 81 98.765 78 0.216 0.211 2 0.015 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2FOL _struct.title 'Crystal structure of human RAB1A in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;G-PROTEIN, RAB, GTP ANALOGUE, STRUCTURAL GENOMICS, STRUCT URAL GENOMICS CONSORTIUM, SGC, Structural Genomics Consortium, PROTEIN TRANSPORT ; _struct_keywords.entry_id 2FOL _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details 'not known' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 37 ? ASP A 48 ? GLY A 20 ASP A 31 1 ? 12 HELX_P HELX_P2 2 ASP A 109 ? ASN A 115 ? ASP A 92 ASN A 98 1 ? 7 HELX_P HELX_P3 3 ASN A 115 ? TYR A 126 ? ASN A 98 TYR A 109 1 ? 12 HELX_P HELX_P4 4 ASP A 149 ? GLY A 161 ? ASP A 132 GLY A 144 1 ? 13 HELX_P HELX_P5 5 ASN A 174 ? MET A 190 ? ASN A 157 MET A 173 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 39 OG ? ? ? 1_555 B MG . MG ? ? A SER 22 A MG 202 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc2 metalc ? ? C GDP . O1B ? ? ? 1_555 B MG . MG ? ? A GDP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.698 ? ? metalc3 metalc ? ? C GDP . O3B ? ? ? 1_555 B MG . MG ? ? A GDP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 301 1_555 ? ? ? ? ? ? ? 1.853 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 302 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 306 1_555 ? ? ? ? ? ? ? 2.317 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 63 ? LEU A 69 ? LYS A 46 LEU A 52 A 2 LYS A 72 ? TRP A 79 ? LYS A 55 TRP A 62 A 3 TYR A 24 ? GLY A 32 ? TYR A 7 GLY A 15 A 4 GLY A 100 ? ASP A 106 ? GLY A 83 ASP A 89 A 5 ASN A 132 ? ASN A 138 ? ASN A 115 ASN A 121 A 6 PHE A 164 ? GLU A 166 ? PHE A 147 GLU A 149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 63 ? N LYS A 46 O ILE A 78 ? O ILE A 61 A 2 3 O LYS A 75 ? O LYS A 58 N PHE A 26 ? N PHE A 9 A 3 4 N LEU A 29 ? N LEU A 12 O ILE A 102 ? O ILE A 85 A 4 5 N ILE A 101 ? N ILE A 84 O ASN A 132 ? O ASN A 115 A 5 6 N LEU A 135 ? N LEU A 118 O LEU A 165 ? O LEU A 148 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 202 ? 5 'BINDING SITE FOR RESIDUE MG A 202' AC2 Software A GDP 201 ? 21 'BINDING SITE FOR RESIDUE GDP A 201' AC3 Software A UNX 401 ? 2 'BINDING SITE FOR RESIDUE UNX A 401' AC4 Software A UNX 402 ? 6 'BINDING SITE FOR RESIDUE UNX A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 39 ? SER A 22 . ? 1_555 ? 2 AC1 5 GDP C . ? GDP A 201 . ? 1_555 ? 3 AC1 5 HOH F . ? HOH A 301 . ? 1_555 ? 4 AC1 5 HOH F . ? HOH A 302 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 306 . ? 1_555 ? 6 AC2 21 ASP A 33 ? ASP A 16 . ? 1_555 ? 7 AC2 21 SER A 34 ? SER A 17 . ? 1_555 ? 8 AC2 21 GLY A 35 ? GLY A 18 . ? 1_555 ? 9 AC2 21 VAL A 36 ? VAL A 19 . ? 1_555 ? 10 AC2 21 GLY A 37 ? GLY A 20 . ? 1_555 ? 11 AC2 21 LYS A 38 ? LYS A 21 . ? 1_555 ? 12 AC2 21 SER A 39 ? SER A 22 . ? 1_555 ? 13 AC2 21 CYS A 40 ? CYS A 23 . ? 1_555 ? 14 AC2 21 TYR A 50 ? TYR A 33 . ? 1_555 ? 15 AC2 21 GLU A 52 ? GLU A 35 . ? 1_555 ? 16 AC2 21 ASN A 138 ? ASN A 121 . ? 1_555 ? 17 AC2 21 LYS A 139 ? LYS A 122 . ? 1_555 ? 18 AC2 21 ASP A 141 ? ASP A 124 . ? 1_555 ? 19 AC2 21 LEU A 142 ? LEU A 125 . ? 1_555 ? 20 AC2 21 SER A 168 ? SER A 151 . ? 1_555 ? 21 AC2 21 ALA A 169 ? ALA A 152 . ? 1_555 ? 22 AC2 21 LYS A 170 ? LYS A 153 . ? 1_555 ? 23 AC2 21 MG B . ? MG A 202 . ? 1_555 ? 24 AC2 21 HOH F . ? HOH A 301 . ? 1_555 ? 25 AC2 21 HOH F . ? HOH A 302 . ? 1_555 ? 26 AC2 21 HOH F . ? HOH A 306 . ? 1_555 ? 27 AC3 2 ASP A 109 ? ASP A 92 . ? 1_555 ? 28 AC3 2 ASP A 109 ? ASP A 92 . ? 5_555 ? 29 AC4 6 GLY A 59 ? GLY A 42 . ? 1_555 ? 30 AC4 6 VAL A 60 ? VAL A 43 . ? 1_555 ? 31 AC4 6 ALA A 98 ? ALA A 81 . ? 3_455 ? 32 AC4 6 HIS A 99 ? HIS A 82 . ? 3_455 ? 33 AC4 6 SER A 128 ? SER A 111 . ? 3_455 ? 34 AC4 6 ARG A 189 ? ARG A 172 . ? 3_455 ? # _atom_sites.entry_id 2FOL _atom_sites.fract_transf_matrix[1][1] 0.01319 _atom_sites.fract_transf_matrix[1][2] 0.00762 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01524 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02038 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -16 ? ? ? A . n A 1 2 GLY 2 -15 ? ? ? A . n A 1 3 SER 3 -14 ? ? ? A . n A 1 4 SER 4 -13 ? ? ? A . n A 1 5 HIS 5 -12 ? ? ? A . n A 1 6 HIS 6 -11 ? ? ? A . n A 1 7 HIS 7 -10 ? ? ? A . n A 1 8 HIS 8 -9 ? ? ? A . n A 1 9 HIS 9 -8 ? ? ? A . n A 1 10 HIS 10 -7 ? ? ? A . n A 1 11 SER 11 -6 ? ? ? A . n A 1 12 SER 12 -5 ? ? ? A . n A 1 13 GLY 13 -4 ? ? ? A . n A 1 14 LEU 14 -3 ? ? ? A . n A 1 15 VAL 15 -2 ? ? ? A . n A 1 16 PRO 16 -1 ? ? ? A . n A 1 17 ARG 17 0 ? ? ? A . n A 1 18 GLY 18 1 ? ? ? A . n A 1 19 SER 19 2 ? ? ? A . n A 1 20 PRO 20 3 ? ? ? A . n A 1 21 GLU 21 4 ? ? ? A . n A 1 22 TYR 22 5 5 TYR TYR A . n A 1 23 ASP 23 6 6 ASP ASP A . n A 1 24 TYR 24 7 7 TYR TYR A . n A 1 25 LEU 25 8 8 LEU LEU A . n A 1 26 PHE 26 9 9 PHE PHE A . n A 1 27 LYS 27 10 10 LYS LYS A . n A 1 28 LEU 28 11 11 LEU LEU A . n A 1 29 LEU 29 12 12 LEU LEU A . n A 1 30 LEU 30 13 13 LEU LEU A . n A 1 31 ILE 31 14 14 ILE ILE A . n A 1 32 GLY 32 15 15 GLY GLY A . n A 1 33 ASP 33 16 16 ASP ASP A . n A 1 34 SER 34 17 17 SER SER A . n A 1 35 GLY 35 18 18 GLY GLY A . n A 1 36 VAL 36 19 19 VAL VAL A . n A 1 37 GLY 37 20 20 GLY GLY A . n A 1 38 LYS 38 21 21 LYS LYS A . n A 1 39 SER 39 22 22 SER SER A . n A 1 40 CYS 40 23 23 CYS CYS A . n A 1 41 LEU 41 24 24 LEU LEU A . n A 1 42 LEU 42 25 25 LEU LEU A . n A 1 43 LEU 43 26 26 LEU LEU A . n A 1 44 ARG 44 27 27 ARG ARG A . n A 1 45 PHE 45 28 28 PHE PHE A . n A 1 46 ALA 46 29 29 ALA ALA A . n A 1 47 ASP 47 30 30 ASP ASP A . n A 1 48 ASP 48 31 31 ASP ASP A . n A 1 49 THR 49 32 32 THR THR A . n A 1 50 TYR 50 33 33 TYR TYR A . n A 1 51 THR 51 34 34 THR THR A . n A 1 52 GLU 52 35 35 GLU GLU A . n A 1 53 SER 53 36 36 SER SER A . n A 1 54 TYR 54 37 37 TYR TYR A . n A 1 55 ILE 55 38 38 ILE ILE A . n A 1 56 SER 56 39 39 SER SER A . n A 1 57 THR 57 40 40 THR THR A . n A 1 58 ILE 58 41 41 ILE ILE A . n A 1 59 GLY 59 42 42 GLY GLY A . n A 1 60 VAL 60 43 43 VAL VAL A . n A 1 61 ASP 61 44 44 ASP ASP A . n A 1 62 PHE 62 45 45 PHE PHE A . n A 1 63 LYS 63 46 46 LYS LYS A . n A 1 64 ILE 64 47 47 ILE ILE A . n A 1 65 ARG 65 48 48 ARG ARG A . n A 1 66 THR 66 49 49 THR THR A . n A 1 67 ILE 67 50 50 ILE ILE A . n A 1 68 GLU 68 51 51 GLU GLU A . n A 1 69 LEU 69 52 52 LEU LEU A . n A 1 70 ASP 70 53 53 ASP ASP A . n A 1 71 GLY 71 54 54 GLY GLY A . n A 1 72 LYS 72 55 55 LYS LYS A . n A 1 73 THR 73 56 56 THR THR A . n A 1 74 ILE 74 57 57 ILE ILE A . n A 1 75 LYS 75 58 58 LYS LYS A . n A 1 76 LEU 76 59 59 LEU LEU A . n A 1 77 GLN 77 60 60 GLN GLN A . n A 1 78 ILE 78 61 61 ILE ILE A . n A 1 79 TRP 79 62 62 TRP TRP A . n A 1 80 ASP 80 63 63 ASP ASP A . n A 1 81 THR 81 64 ? ? ? A . n A 1 82 ALA 82 65 ? ? ? A . n A 1 83 GLY 83 66 ? ? ? A . n A 1 84 GLN 84 67 ? ? ? A . n A 1 85 GLU 85 68 ? ? ? A . n A 1 86 ARG 86 69 ? ? ? A . n A 1 87 PHE 87 70 ? ? ? A . n A 1 88 ARG 88 71 ? ? ? A . n A 1 89 THR 89 72 ? ? ? A . n A 1 90 ILE 90 73 ? ? ? A . n A 1 91 THR 91 74 ? ? ? A . n A 1 92 SER 92 75 ? ? ? A . n A 1 93 SER 93 76 ? ? ? A . n A 1 94 TYR 94 77 ? ? ? A . n A 1 95 TYR 95 78 78 TYR TYR A . n A 1 96 ARG 96 79 79 ARG ARG A . n A 1 97 GLY 97 80 80 GLY GLY A . n A 1 98 ALA 98 81 81 ALA ALA A . n A 1 99 HIS 99 82 82 HIS HIS A . n A 1 100 GLY 100 83 83 GLY GLY A . n A 1 101 ILE 101 84 84 ILE ILE A . n A 1 102 ILE 102 85 85 ILE ILE A . n A 1 103 VAL 103 86 86 VAL VAL A . n A 1 104 VAL 104 87 87 VAL VAL A . n A 1 105 TYR 105 88 88 TYR TYR A . n A 1 106 ASP 106 89 89 ASP ASP A . n A 1 107 VAL 107 90 90 VAL VAL A . n A 1 108 THR 108 91 91 THR THR A . n A 1 109 ASP 109 92 92 ASP ASP A . n A 1 110 GLN 110 93 93 GLN GLN A . n A 1 111 GLU 111 94 94 GLU GLU A . n A 1 112 SER 112 95 95 SER SER A . n A 1 113 PHE 113 96 96 PHE PHE A . n A 1 114 ASN 114 97 97 ASN ASN A . n A 1 115 ASN 115 98 98 ASN ASN A . n A 1 116 VAL 116 99 99 VAL VAL A . n A 1 117 LYS 117 100 100 LYS LYS A . n A 1 118 GLN 118 101 101 GLN GLN A . n A 1 119 TRP 119 102 102 TRP TRP A . n A 1 120 LEU 120 103 103 LEU LEU A . n A 1 121 GLN 121 104 104 GLN GLN A . n A 1 122 GLU 122 105 105 GLU GLU A . n A 1 123 ILE 123 106 106 ILE ILE A . n A 1 124 ASP 124 107 107 ASP ASP A . n A 1 125 ARG 125 108 108 ARG ARG A . n A 1 126 TYR 126 109 109 TYR TYR A . n A 1 127 ALA 127 110 110 ALA ALA A . n A 1 128 SER 128 111 111 SER SER A . n A 1 129 GLU 129 112 112 GLU GLU A . n A 1 130 ASN 130 113 113 ASN ASN A . n A 1 131 VAL 131 114 114 VAL VAL A . n A 1 132 ASN 132 115 115 ASN ASN A . n A 1 133 LYS 133 116 116 LYS LYS A . n A 1 134 LEU 134 117 117 LEU LEU A . n A 1 135 LEU 135 118 118 LEU LEU A . n A 1 136 VAL 136 119 119 VAL VAL A . n A 1 137 GLY 137 120 120 GLY GLY A . n A 1 138 ASN 138 121 121 ASN ASN A . n A 1 139 LYS 139 122 122 LYS LYS A . n A 1 140 CYS 140 123 123 CYS CYS A . n A 1 141 ASP 141 124 124 ASP ASP A . n A 1 142 LEU 142 125 125 LEU LEU A . n A 1 143 THR 143 126 126 THR THR A . n A 1 144 THR 144 127 127 THR THR A . n A 1 145 LYS 145 128 128 LYS LYS A . n A 1 146 LYS 146 129 129 LYS LYS A . n A 1 147 VAL 147 130 130 VAL VAL A . n A 1 148 VAL 148 131 131 VAL VAL A . n A 1 149 ASP 149 132 132 ASP ASP A . n A 1 150 TYR 150 133 133 TYR TYR A . n A 1 151 THR 151 134 134 THR THR A . n A 1 152 THR 152 135 135 THR THR A . n A 1 153 ALA 153 136 136 ALA ALA A . n A 1 154 LYS 154 137 137 LYS LYS A . n A 1 155 GLU 155 138 138 GLU GLU A . n A 1 156 PHE 156 139 139 PHE PHE A . n A 1 157 ALA 157 140 140 ALA ALA A . n A 1 158 ASP 158 141 141 ASP ASP A . n A 1 159 SER 159 142 142 SER SER A . n A 1 160 LEU 160 143 143 LEU LEU A . n A 1 161 GLY 161 144 144 GLY GLY A . n A 1 162 ILE 162 145 145 ILE ILE A . n A 1 163 PRO 163 146 146 PRO PRO A . n A 1 164 PHE 164 147 147 PHE PHE A . n A 1 165 LEU 165 148 148 LEU LEU A . n A 1 166 GLU 166 149 149 GLU GLU A . n A 1 167 THR 167 150 150 THR THR A . n A 1 168 SER 168 151 151 SER SER A . n A 1 169 ALA 169 152 152 ALA ALA A . n A 1 170 LYS 170 153 153 LYS LYS A . n A 1 171 ASN 171 154 154 ASN ASN A . n A 1 172 ALA 172 155 155 ALA ALA A . n A 1 173 THR 173 156 156 THR THR A . n A 1 174 ASN 174 157 157 ASN ASN A . n A 1 175 VAL 175 158 158 VAL VAL A . n A 1 176 GLU 176 159 159 GLU GLU A . n A 1 177 GLN 177 160 160 GLN GLN A . n A 1 178 SER 178 161 161 SER SER A . n A 1 179 PHE 179 162 162 PHE PHE A . n A 1 180 MET 180 163 163 MET MET A . n A 1 181 THR 181 164 164 THR THR A . n A 1 182 MET 182 165 165 MET MET A . n A 1 183 ALA 183 166 166 ALA ALA A . n A 1 184 ALA 184 167 167 ALA ALA A . n A 1 185 GLU 185 168 168 GLU GLU A . n A 1 186 ILE 186 169 169 ILE ILE A . n A 1 187 LYS 187 170 170 LYS LYS A . n A 1 188 LYS 188 171 171 LYS LYS A . n A 1 189 ARG 189 172 172 ARG ARG A . n A 1 190 MET 190 173 173 MET MET A . n A 1 191 GLY 191 174 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 202 202 MG MG A . C 3 GDP 1 201 201 GDP GDP A . D 4 UNX 1 401 401 UNX UNX A . E 4 UNX 1 402 402 UNX UNX A . F 5 HOH 1 301 301 HOH HOH A . F 5 HOH 2 302 302 HOH HOH A . F 5 HOH 3 303 303 HOH HOH A . F 5 HOH 4 305 305 HOH HOH A . F 5 HOH 5 306 306 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id UNX _pdbx_struct_special_symmetry.auth_seq_id 401 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id UNX _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O1B ? C GDP . ? A GDP 201 ? 1_555 139.5 ? 2 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O3B ? C GDP . ? A GDP 201 ? 1_555 84.9 ? 3 O1B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O3B ? C GDP . ? A GDP 201 ? 1_555 58.6 ? 4 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 88.7 ? 5 O1B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 90.9 ? 6 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 113.9 ? 7 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 74.1 ? 8 O1B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 114.7 ? 9 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 84.0 ? 10 O ? F HOH . ? A HOH 301 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 154.3 ? 11 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 306 ? 1_555 149.2 ? 12 O1B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 306 ? 1_555 58.7 ? 13 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 306 ? 1_555 94.3 ? 14 O ? F HOH . ? A HOH 301 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 306 ? 1_555 119.1 ? 15 O ? F HOH . ? A HOH 302 ? 1_555 MG ? B MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 306 ? 1_555 75.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-31 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 5 'Structure model' '_struct_ref_seq_dif.details' 39 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details . _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -20.8949 _pdbx_refine_tls.origin_y 16.5437 _pdbx_refine_tls.origin_z 5.9051 _pdbx_refine_tls.T[1][1] 0.1055 _pdbx_refine_tls.T[2][2] 0.1480 _pdbx_refine_tls.T[3][3] 0.0975 _pdbx_refine_tls.T[1][2] -0.0740 _pdbx_refine_tls.T[1][3] -0.0405 _pdbx_refine_tls.T[2][3] -0.1592 _pdbx_refine_tls.L[1][1] 3.6219 _pdbx_refine_tls.L[2][2] 3.4933 _pdbx_refine_tls.L[3][3] 1.2636 _pdbx_refine_tls.L[1][2] -0.2086 _pdbx_refine_tls.L[1][3] -0.2542 _pdbx_refine_tls.L[2][3] -1.0124 _pdbx_refine_tls.S[1][1] -0.0599 _pdbx_refine_tls.S[2][2] 0.1536 _pdbx_refine_tls.S[3][3] -0.0937 _pdbx_refine_tls.S[1][2] 0.5078 _pdbx_refine_tls.S[1][3] -0.3102 _pdbx_refine_tls.S[2][3] -0.1911 _pdbx_refine_tls.S[2][1] -0.0694 _pdbx_refine_tls.S[3][1] -0.0182 _pdbx_refine_tls.S[3][2] 0.0678 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 22 A 190 ALL A 5 A 173 'X-RAY DIFFRACTION' ? 2 1 C 1 B 1 ALL A 201 A 202 'X-RAY DIFFRACTION' ? # _phasing.method mr # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? program 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 4 PDB_EXTRACT 1.700 'Jul. 11, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. ; 42 ;MOLPROBITY STRUCTURE VALIDATION PROGRAMS : MOLPROBITY (KING, REDUCE, AND PROBE) AUTHORS : I.W.DAVIS,J.M.WORD URL : HTTP://KINEMAGE.BIOCHEM.DUKE.EDU/MOLPROBITY/ AUTHORS : J.S.RICHARDSON,W.B.ARENDALL,D.C.RICHARDSON REFERENCE : NEW TOOLS AND DATA FOR IMPROVING : STRUCTURES, USING ALL-ATOM CONTACTS : METHODS IN ENZYMOLOGY. 2003;374:385-412. MOLPROBITY OUTPUT SCORES: ALL-ATOM CLASHSCORE : 18.17 (0.00 B<40) BAD ROTAMERS : 6.6% 9/137 (TARGET 0-1%) RAMACHANDRAN OUTLIERS : 0.0% 0/151 (TARGET 0.2%) RAMACHANDRAN FAVORED : 95.4% 144/151 (TARGET 98.0%) ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 92 ? ? UNK A UNX 401 ? ? 2.12 2 1 O A GLY 42 ? ? UNK A UNX 402 ? ? 2.12 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 160 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 160 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.649 _pdbx_validate_rmsd_bond.bond_target_value 1.506 _pdbx_validate_rmsd_bond.bond_deviation 0.143 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 33 ? ? -170.29 138.85 2 1 LEU A 52 ? ? -164.13 118.73 3 1 TYR A 109 ? ? -109.80 66.94 4 1 ALA A 110 ? ? -174.03 140.91 5 1 SER A 111 ? ? -34.71 134.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -16 ? A MET 1 2 1 Y 1 A GLY -15 ? A GLY 2 3 1 Y 1 A SER -14 ? A SER 3 4 1 Y 1 A SER -13 ? A SER 4 5 1 Y 1 A HIS -12 ? A HIS 5 6 1 Y 1 A HIS -11 ? A HIS 6 7 1 Y 1 A HIS -10 ? A HIS 7 8 1 Y 1 A HIS -9 ? A HIS 8 9 1 Y 1 A HIS -8 ? A HIS 9 10 1 Y 1 A HIS -7 ? A HIS 10 11 1 Y 1 A SER -6 ? A SER 11 12 1 Y 1 A SER -5 ? A SER 12 13 1 Y 1 A GLY -4 ? A GLY 13 14 1 Y 1 A LEU -3 ? A LEU 14 15 1 Y 1 A VAL -2 ? A VAL 15 16 1 Y 1 A PRO -1 ? A PRO 16 17 1 Y 1 A ARG 0 ? A ARG 17 18 1 Y 1 A GLY 1 ? A GLY 18 19 1 Y 1 A SER 2 ? A SER 19 20 1 Y 1 A PRO 3 ? A PRO 20 21 1 Y 1 A GLU 4 ? A GLU 21 22 1 Y 1 A THR 64 ? A THR 81 23 1 Y 1 A ALA 65 ? A ALA 82 24 1 Y 1 A GLY 66 ? A GLY 83 25 1 Y 1 A GLN 67 ? A GLN 84 26 1 Y 1 A GLU 68 ? A GLU 85 27 1 Y 1 A ARG 69 ? A ARG 86 28 1 Y 1 A PHE 70 ? A PHE 87 29 1 Y 1 A ARG 71 ? A ARG 88 30 1 Y 1 A THR 72 ? A THR 89 31 1 Y 1 A ILE 73 ? A ILE 90 32 1 Y 1 A THR 74 ? A THR 91 33 1 Y 1 A SER 75 ? A SER 92 34 1 Y 1 A SER 76 ? A SER 93 35 1 Y 1 A TYR 77 ? A TYR 94 36 1 Y 1 A GLY 174 ? A GLY 191 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1YZN 'pdb entries 1YZN, 1UKV' 2 ? 'experimental model' PDB 1UKV 'pdb entries 1YZN, 1UKV' #