HEADER HYDROLASE 13-FEB-06 2G0W TITLE CRYSTAL STRUCTURE OF A PUTATIVE SUGAR ISOMERASE (LMO2234) FROM TITLE 2 LISTERIA MONOCYTOGENES AT 1.70 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LMO2234 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 STRAIN: LI2; SOURCE 5 GENE: 16411704; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PUTATIVE SUGAR ISOMERASE, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 25-JAN-23 2G0W 1 REMARK SEQADV LINK REVDAT 3 28-JUL-10 2G0W 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2G0W 1 VERSN REVDAT 1 07-MAR-06 2G0W 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF LMO2234 PROTEIN (16411704) FROM JRNL TITL 2 LISTERIA MONOCYTOGENES LI2 AT 1.70 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 58148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2940 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3592 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 189 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4345 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 484 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.34000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : -0.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.75000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.824 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4476 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4073 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6055 ; 1.640 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9482 ; 0.884 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 560 ; 5.957 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 206 ;33.328 ;24.757 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 775 ;14.562 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;18.940 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 684 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4980 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 853 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1040 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4340 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2206 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2469 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 429 ; 0.193 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.061 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.236 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 66 ; 0.224 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 40 ; 0.183 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3055 ; 1.657 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1144 ; 0.333 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4489 ; 2.337 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1866 ; 4.323 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1565 ; 5.524 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. RESIDUES 1-9 IN CHAIN A AND 284 IN CHAIN B REMARK 3 WERE DISORDERED AND NOT INCLUDED IN THE MODEL. 4. 2 HIS RESIDUES REMARK 3 OF THE HIS-TAG ARE ORDERED IN CHAIN B. REMARK 4 REMARK 4 2G0W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036548. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999, 0.9797 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58181 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 28.894 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.82700 REMARK 200 R SYM FOR SHELL (I) : 0.82700 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.0% PEG-3350, 0.2M MAGNESIUM REMARK 280 ACETATE, 0.1M TRIS, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.62450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 ALA A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 6 REMARK 465 ASN A 7 REMARK 465 LEU A 8 REMARK 465 LYS A 9 REMARK 465 MSE B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 ARG B 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 470 GLU A 90 CD OE1 OE2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 LYS A 271 CD CE NZ REMARK 470 LYS A 272 NZ REMARK 470 GLU B 85 CD OE1 OE2 REMARK 470 GLU B 116 CB CG CD OE1 OE2 REMARK 470 GLU B 121 CD OE1 OE2 REMARK 470 LYS B 208 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 128 N CYS B 131 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 172 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 135 -112.09 57.86 REMARK 500 CYS A 200 -158.78 -177.89 REMARK 500 HIS A 216 -24.18 -143.29 REMARK 500 ASP A 217 54.68 -148.32 REMARK 500 TRP A 278 63.97 -158.11 REMARK 500 GLU B 135 -113.95 58.91 REMARK 500 CYS B 200 -158.53 -179.06 REMARK 500 HIS B 216 -16.31 -140.30 REMARK 500 ASP B 217 56.08 -149.43 REMARK 500 TRP B 278 60.57 -162.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 142 OE2 REMARK 620 2 ASP A 172 OD2 93.1 REMARK 620 3 GLN A 198 OE1 89.0 88.5 REMARK 620 4 GLU A 248 OE1 173.8 88.1 85.0 REMARK 620 5 HOH A 774 O 87.6 174.9 86.4 90.7 REMARK 620 6 HOH A 775 O 92.7 87.2 175.4 93.4 97.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 280 OE2 REMARK 620 2 HOH A 510 O 85.2 REMARK 620 3 HOH A 511 O 86.8 92.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 504 O REMARK 620 2 HOH A 505 O 92.5 REMARK 620 3 HOH A 506 O 93.7 99.2 REMARK 620 4 HOH A 507 O 176.4 87.5 82.7 REMARK 620 5 HOH A 508 O 81.5 174.0 82.2 98.5 REMARK 620 6 HOH A 509 O 86.1 86.0 174.9 97.5 92.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 142 OE2 REMARK 620 2 ASP B 172 OD2 97.1 REMARK 620 3 GLN B 198 NE2 95.0 89.3 REMARK 620 4 GLU B 248 OE1 168.0 94.7 82.9 REMARK 620 5 HOH B 506 O 81.3 177.9 89.6 86.9 REMARK 620 6 HOH B 507 O 84.8 97.6 173.1 95.9 83.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 358685 RELATED DB: TARGETDB DBREF 2G0W A 1 284 UNP Q4EPT5 Q4EPT5_LISMO 1 284 DBREF 2G0W B 1 284 UNP Q4EPT5 Q4EPT5_LISMO 1 284 SEQADV 2G0W MSE A -11 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W GLY A -10 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W SER A -9 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W ASP A -8 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W LYS A -7 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W ILE A -6 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS A -5 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS A -4 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS A -3 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS A -2 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS A -1 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS A 0 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W MSE A 1 UNP Q4EPT5 MET 1 MODIFIED RESIDUE SEQADV 2G0W MSE A 61 UNP Q4EPT5 MET 61 MODIFIED RESIDUE SEQADV 2G0W MSE A 70 UNP Q4EPT5 MET 70 MODIFIED RESIDUE SEQADV 2G0W MSE A 101 UNP Q4EPT5 MET 101 MODIFIED RESIDUE SEQADV 2G0W MSE A 144 UNP Q4EPT5 MET 144 MODIFIED RESIDUE SEQADV 2G0W MSE A 245 UNP Q4EPT5 MET 245 MODIFIED RESIDUE SEQADV 2G0W MSE A 254 UNP Q4EPT5 MET 254 MODIFIED RESIDUE SEQADV 2G0W MSE B -11 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W GLY B -10 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W SER B -9 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W ASP B -8 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W LYS B -7 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W ILE B -6 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS B -5 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS B -4 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS B -3 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS B -2 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS B -1 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W HIS B 0 UNP Q4EPT5 EXPRESSION TAG SEQADV 2G0W MSE B 1 UNP Q4EPT5 MET 1 MODIFIED RESIDUE SEQADV 2G0W MSE B 61 UNP Q4EPT5 MET 61 MODIFIED RESIDUE SEQADV 2G0W MSE B 70 UNP Q4EPT5 MET 70 MODIFIED RESIDUE SEQADV 2G0W MSE B 101 UNP Q4EPT5 MET 101 MODIFIED RESIDUE SEQADV 2G0W MSE B 144 UNP Q4EPT5 MET 144 MODIFIED RESIDUE SEQADV 2G0W MSE B 245 UNP Q4EPT5 MET 245 MODIFIED RESIDUE SEQADV 2G0W MSE B 254 UNP Q4EPT5 MET 254 MODIFIED RESIDUE SEQRES 1 A 296 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 296 THR ASN ALA ASN GLY ASN LEU LYS LYS CYS PRO ILE THR SEQRES 3 A 296 ILE SER SER TYR THR LEU GLY THR GLU VAL SER PHE PRO SEQRES 4 A 296 LYS ARG VAL LYS VAL ALA ALA GLU ASN GLY PHE ASP GLY SEQRES 5 A 296 ILE GLY LEU ARG ALA GLU ASN TYR VAL ASP ALA LEU ALA SEQRES 6 A 296 ALA GLY LEU THR ASP GLU ASP MSE LEU ARG ILE LEU ASP SEQRES 7 A 296 GLU HIS ASN MSE LYS VAL THR GLU VAL GLU TYR ILE THR SEQRES 8 A 296 GLN TRP GLY THR ALA GLU ASP ARG THR ALA GLU GLN GLN SEQRES 9 A 296 LYS LYS GLU GLN THR THR PHE HIS MSE ALA ARG LEU PHE SEQRES 10 A 296 GLY VAL LYS HIS ILE ASN CYS GLY LEU LEU GLU LYS ILE SEQRES 11 A 296 PRO GLU GLU GLN ILE ILE VAL ALA LEU GLY GLU LEU CYS SEQRES 12 A 296 ASP ARG ALA GLU GLU LEU ILE ILE GLY LEU GLU PHE MSE SEQRES 13 A 296 PRO TYR SER GLY VAL ALA ASP LEU GLN ALA ALA TRP ARG SEQRES 14 A 296 VAL ALA GLU ALA CYS GLY ARG ASP ASN ALA GLN LEU ILE SEQRES 15 A 296 CYS ASP THR TRP HIS TRP ALA ARG ALA ASN GLN THR ALA SEQRES 16 A 296 GLU SER ILE LYS ASN VAL PRO ALA ASP ARG ILE VAL SER SEQRES 17 A 296 ILE GLN LEU CYS ASP VAL HIS GLU THR PRO TYR LYS GLU SEQRES 18 A 296 LEU ARG GLU GLU SER LEU HIS ASP ARG LEU ALA PRO GLY SEQRES 19 A 296 GLU GLY TYR GLY ASP THR VAL GLY PHE ALA LYS ILE LEU SEQRES 20 A 296 LYS GLU HIS GLY VAL ASN PRO ARG VAL MSE GLY VAL GLU SEQRES 21 A 296 VAL ILE SER ASP SER MSE VAL ALA THR GLY LEU GLU TYR SEQRES 22 A 296 ALA ALA LEU LYS VAL TYR ASN ALA THR LYS LYS VAL LEU SEQRES 23 A 296 ASP GLU ALA TRP PRO GLU ILE SER PRO ARG SEQRES 1 B 296 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 B 296 THR ASN ALA ASN GLY ASN LEU LYS LYS CYS PRO ILE THR SEQRES 3 B 296 ILE SER SER TYR THR LEU GLY THR GLU VAL SER PHE PRO SEQRES 4 B 296 LYS ARG VAL LYS VAL ALA ALA GLU ASN GLY PHE ASP GLY SEQRES 5 B 296 ILE GLY LEU ARG ALA GLU ASN TYR VAL ASP ALA LEU ALA SEQRES 6 B 296 ALA GLY LEU THR ASP GLU ASP MSE LEU ARG ILE LEU ASP SEQRES 7 B 296 GLU HIS ASN MSE LYS VAL THR GLU VAL GLU TYR ILE THR SEQRES 8 B 296 GLN TRP GLY THR ALA GLU ASP ARG THR ALA GLU GLN GLN SEQRES 9 B 296 LYS LYS GLU GLN THR THR PHE HIS MSE ALA ARG LEU PHE SEQRES 10 B 296 GLY VAL LYS HIS ILE ASN CYS GLY LEU LEU GLU LYS ILE SEQRES 11 B 296 PRO GLU GLU GLN ILE ILE VAL ALA LEU GLY GLU LEU CYS SEQRES 12 B 296 ASP ARG ALA GLU GLU LEU ILE ILE GLY LEU GLU PHE MSE SEQRES 13 B 296 PRO TYR SER GLY VAL ALA ASP LEU GLN ALA ALA TRP ARG SEQRES 14 B 296 VAL ALA GLU ALA CYS GLY ARG ASP ASN ALA GLN LEU ILE SEQRES 15 B 296 CYS ASP THR TRP HIS TRP ALA ARG ALA ASN GLN THR ALA SEQRES 16 B 296 GLU SER ILE LYS ASN VAL PRO ALA ASP ARG ILE VAL SER SEQRES 17 B 296 ILE GLN LEU CYS ASP VAL HIS GLU THR PRO TYR LYS GLU SEQRES 18 B 296 LEU ARG GLU GLU SER LEU HIS ASP ARG LEU ALA PRO GLY SEQRES 19 B 296 GLU GLY TYR GLY ASP THR VAL GLY PHE ALA LYS ILE LEU SEQRES 20 B 296 LYS GLU HIS GLY VAL ASN PRO ARG VAL MSE GLY VAL GLU SEQRES 21 B 296 VAL ILE SER ASP SER MSE VAL ALA THR GLY LEU GLU TYR SEQRES 22 B 296 ALA ALA LEU LYS VAL TYR ASN ALA THR LYS LYS VAL LEU SEQRES 23 B 296 ASP GLU ALA TRP PRO GLU ILE SER PRO ARG MODRES 2G0W MSE A 61 MET SELENOMETHIONINE MODRES 2G0W MSE A 70 MET SELENOMETHIONINE MODRES 2G0W MSE A 101 MET SELENOMETHIONINE MODRES 2G0W MSE A 144 MET SELENOMETHIONINE MODRES 2G0W MSE A 245 MET SELENOMETHIONINE MODRES 2G0W MSE A 254 MET SELENOMETHIONINE MODRES 2G0W MSE B 1 MET SELENOMETHIONINE MODRES 2G0W MSE B 61 MET SELENOMETHIONINE MODRES 2G0W MSE B 70 MET SELENOMETHIONINE MODRES 2G0W MSE B 101 MET SELENOMETHIONINE MODRES 2G0W MSE B 144 MET SELENOMETHIONINE MODRES 2G0W MSE B 245 MET SELENOMETHIONINE MODRES 2G0W MSE B 254 MET SELENOMETHIONINE HET MSE A 61 8 HET MSE A 70 8 HET MSE A 101 8 HET MSE A 144 8 HET MSE A 245 8 HET MSE A 254 8 HET MSE B 1 8 HET MSE B 61 8 HET MSE B 70 8 HET MSE B 101 8 HET MSE B 144 8 HET MSE B 245 8 HET MSE B 254 11 HET MG A 501 1 HET MG A 502 1 HET MG A 503 1 HET MG B 501 1 HET PG4 B 502 13 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 3 MG 4(MG 2+) FORMUL 7 PG4 C8 H18 O5 FORMUL 8 HOH *484(H2 O) HELIX 1 1 SER A 17 GLY A 21 5 5 HELIX 2 2 SER A 25 ASN A 36 1 12 HELIX 3 3 ALA A 45 ALA A 54 1 10 HELIX 4 4 THR A 57 HIS A 68 1 12 HELIX 5 5 THR A 88 GLY A 106 1 19 HELIX 6 6 PRO A 119 GLU A 135 1 17 HELIX 7 7 ASP A 151 GLY A 163 1 13 HELIX 8 8 THR A 173 ALA A 179 1 7 HELIX 9 9 THR A 182 LYS A 187 5 6 HELIX 10 10 PRO A 190 ASP A 192 5 3 HELIX 11 11 GLU A 209 ASP A 217 1 9 HELIX 12 12 ASP A 227 GLY A 239 1 13 HELIX 13 13 SER A 251 GLY A 258 1 8 HELIX 14 14 GLY A 258 TRP A 278 1 21 HELIX 15 15 PRO A 279 SER A 282 5 4 HELIX 16 16 SER B 17 GLY B 21 5 5 HELIX 17 17 SER B 25 ASN B 36 1 12 HELIX 18 18 ALA B 45 ALA B 54 1 10 HELIX 19 19 THR B 57 HIS B 68 1 12 HELIX 20 20 THR B 88 GLY B 106 1 19 HELIX 21 21 PRO B 119 GLU B 135 1 17 HELIX 22 22 ASP B 151 GLY B 163 1 13 HELIX 23 23 THR B 173 ALA B 179 1 7 HELIX 24 24 PRO B 190 ASP B 192 5 3 HELIX 25 25 GLU B 209 ASP B 217 1 9 HELIX 26 26 ASP B 227 GLY B 239 1 13 HELIX 27 27 SER B 251 GLY B 258 1 8 HELIX 28 28 GLY B 258 TRP B 278 1 21 HELIX 29 29 PRO B 279 SER B 282 5 4 SHEET 1 A 8 LYS A 71 GLU A 76 0 SHEET 2 A 8 GLY A 40 ARG A 44 1 N ILE A 41 O THR A 73 SHEET 3 A 8 ILE A 13 ILE A 15 1 N ILE A 15 O GLY A 42 SHEET 4 A 8 MSE A 245 VAL A 247 1 O MSE A 245 N THR A 14 SHEET 5 A 8 ILE A 194 LEU A 199 1 N LEU A 199 O GLY A 246 SHEET 6 A 8 ALA A 167 ASP A 172 1 N CYS A 171 O GLN A 198 SHEET 7 A 8 ILE A 138 GLU A 142 1 N ILE A 139 O GLN A 168 SHEET 8 A 8 HIS A 109 CYS A 112 1 N CYS A 112 O GLU A 142 SHEET 1 B 2 HIS B 0 THR B 2 0 SHEET 2 B 2 LEU B 8 LYS B 10 -1 O LYS B 9 N MSE B 1 SHEET 1 C 9 ILE B 13 ILE B 15 0 SHEET 2 C 9 GLY B 40 ARG B 44 1 O GLY B 42 N ILE B 15 SHEET 3 C 9 LYS B 71 ILE B 78 1 O GLU B 74 N LEU B 43 SHEET 4 C 9 HIS B 109 CYS B 112 1 O ASN B 111 N VAL B 75 SHEET 5 C 9 ILE B 138 GLU B 142 1 O GLY B 140 N ILE B 110 SHEET 6 C 9 ALA B 167 ASP B 172 1 O GLN B 168 N ILE B 139 SHEET 7 C 9 ILE B 194 LEU B 199 1 O GLN B 198 N CYS B 171 SHEET 8 C 9 VAL B 244 VAL B 247 1 O GLY B 246 N LEU B 199 SHEET 9 C 9 ILE B 13 ILE B 15 1 N THR B 14 O MSE B 245 LINK C ASP A 60 N MSE A 61 1555 1555 1.34 LINK C MSE A 61 N LEU A 62 1555 1555 1.31 LINK C ASN A 69 N MSE A 70 1555 1555 1.34 LINK C MSE A 70 N LYS A 71 1555 1555 1.34 LINK C HIS A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N ALA A 102 1555 1555 1.30 LINK C PHE A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N PRO A 145 1555 1555 1.37 LINK C VAL A 244 N MSE A 245 1555 1555 1.33 LINK C MSE A 245 N GLY A 246 1555 1555 1.32 LINK C SER A 253 N MSE A 254 1555 1555 1.34 LINK C MSE A 254 N VAL A 255 1555 1555 1.33 LINK C HIS B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N THR B 2 1555 1555 1.33 LINK C ASP B 60 N MSE B 61 1555 1555 1.32 LINK C MSE B 61 N LEU B 62 1555 1555 1.33 LINK C ASN B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N LYS B 71 1555 1555 1.34 LINK C HIS B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N ALA B 102 1555 1555 1.33 LINK C PHE B 143 N MSE B 144 1555 1555 1.34 LINK C MSE B 144 N PRO B 145 1555 1555 1.33 LINK C VAL B 244 N MSE B 245 1555 1555 1.33 LINK C MSE B 245 N GLY B 246 1555 1555 1.33 LINK C SER B 253 N MSE B 254 1555 1555 1.34 LINK C MSE B 254 N VAL B 255 1555 1555 1.34 LINK OE2 GLU A 142 MG MG A 501 1555 1555 2.12 LINK OD2 ASP A 172 MG MG A 501 1555 1555 2.15 LINK OE1 GLN A 198 MG MG A 501 1555 1555 2.15 LINK OE1 GLU A 248 MG MG A 501 1555 1555 2.15 LINK OE2 GLU A 280 MG MG A 503 1555 1555 2.17 LINK MG MG A 501 O HOH A 774 1555 1555 2.14 LINK MG MG A 501 O HOH A 775 1555 1555 2.18 LINK MG MG A 502 O HOH A 504 1555 1555 2.17 LINK MG MG A 502 O HOH A 505 1555 1555 2.02 LINK MG MG A 502 O HOH A 506 1555 1555 2.17 LINK MG MG A 502 O HOH A 507 1555 1555 2.09 LINK MG MG A 502 O HOH A 508 1555 1555 2.25 LINK MG MG A 502 O HOH A 509 1555 1555 2.10 LINK MG MG A 503 O HOH A 510 1555 1555 2.12 LINK MG MG A 503 O HOH A 511 1555 1555 2.25 LINK OE2 GLU B 142 MG MG B 501 1555 1555 2.17 LINK OD2 ASP B 172 MG MG B 501 1555 1555 2.14 LINK NE2 GLN B 198 MG MG B 501 1555 1555 1.97 LINK OE1 GLU B 248 MG MG B 501 1555 1555 2.15 LINK MG MG B 501 O HOH B 506 1555 1555 2.49 LINK MG MG B 501 O HOH B 507 1555 1555 2.01 CISPEP 1 GLU A 76 TYR A 77 0 -1.40 CISPEP 2 GLU B 76 TYR B 77 0 1.42 SITE 1 AC1 6 GLU A 142 ASP A 172 GLN A 198 GLU A 248 SITE 2 AC1 6 HOH A 774 HOH A 775 SITE 1 AC2 6 GLU B 142 ASP B 172 GLN B 198 GLU B 248 SITE 2 AC2 6 HOH B 506 HOH B 507 SITE 1 AC3 6 HOH A 504 HOH A 505 HOH A 506 HOH A 507 SITE 2 AC3 6 HOH A 508 HOH A 509 SITE 1 AC4 3 GLU A 280 HOH A 510 HOH A 511 SITE 1 AC5 2 LYS B 93 GLN B 96 CRYST1 62.832 61.249 70.428 90.00 91.10 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015915 0.000000 0.000306 0.00000 SCALE2 0.000000 0.016327 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014202 0.00000