HEADER CELL CYCLE 14-FEB-06 2G1Q TITLE CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 9H COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF11; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KINESIN-RELATED MOTOR PROTEIN EG5, KINESIN-LIKE SPINDLE COMPND 5 PROTEIN HKSP, THYROID RECEPTOR-INTERACTING PROTEIN 5, TRIP5, KINESIN- COMPND 6 LIKE PROTEIN 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIF11, EG5, KNSL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS KSP, KSP-INHIBITOR COMPLEX, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR Y.YAN REVDAT 3 14-FEB-24 2G1Q 1 REMARK LINK REVDAT 2 24-FEB-09 2G1Q 1 VERSN REVDAT 1 03-OCT-06 2G1Q 0 JRNL AUTH C.D.COX,M.TORRENT,M.J.BRESLIN,B.J.MARIANO,D.B.WHITMAN, JRNL AUTH 2 P.J.COLEMAN,C.A.BUSER,E.S.WALSH,K.HAMILTON,M.D.SCHABER, JRNL AUTH 3 R.B.LOBELL,W.TAO,V.J.SOUTH,N.E.KOHL,Y.YAN,L.C.KUO, JRNL AUTH 4 T.PRUEKSARITANONT,D.E.SLAUGHTER,C.LI,E.MAHAN,B.LU, JRNL AUTH 5 G.D.HARTMAN JRNL TITL KINESIN SPINDLE PROTEIN (KSP) INHIBITORS. PART 4: JRNL TITL 2 STRUCTURE-BASED DESIGN OF JRNL TITL 3 5-ALKYLAMINO-3,5-DIARYL-4,5-DIHYDROPYRAZOLES AS POTENT, JRNL TITL 4 WATER-SOLUBLE INHIBITORS OF THE MITOTIC KINESIN KSP. JRNL REF BIOORG.MED.CHEM.LETT. V. 16 3175 2006 JRNL REFN ISSN 0960-894X JRNL PMID 16603356 JRNL DOI 10.1016/J.BMCL.2006.03.040 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 29732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2980 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 112 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.660 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2G1Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30097 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 34.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.11200 REMARK 200 R SYM FOR SHELL (I) : 0.11200 REMARK 200 FOR SHELL : 7.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, POTASSIUM PHOSPHATE, PH 8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.34000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.35000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.82000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.35000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.34000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.82000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS MOTOR DOMAIN IS A PART OF A MULTI-DOMAIN PROTEIN (KSP) REMARK 300 THAT FORMS A TETRAMER. THERE ARE TWO MOTOR DOMAIN MONOMERS IN AN REMARK 300 ASYMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 PRO A 5 REMARK 465 ASN A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 ALA A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 LYS A 12 REMARK 465 GLU A 13 REMARK 465 GLU A 14 REMARK 465 LYS A 15 REMARK 465 GLY A 16 REMARK 465 LYS A 17 REMARK 465 ILE A 272 REMARK 465 GLY A 273 REMARK 465 ARG A 274 REMARK 465 SER A 275 REMARK 465 GLY A 276 REMARK 465 ALA A 277 REMARK 465 VAL A 278 REMARK 465 ASP A 279 REMARK 465 LYS A 280 REMARK 465 ARG A 281 REMARK 465 ALA A 282 REMARK 465 ARG A 283 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 GLY A 286 REMARK 465 PRO A 363 REMARK 465 GLU A 364 REMARK 465 VAL A 365 REMARK 465 ASN A 366 REMARK 465 GLN A 367 REMARK 465 LYS A 368 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 PRO B 5 REMARK 465 ASN B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 ALA B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 LYS B 12 REMARK 465 GLU B 13 REMARK 465 GLU B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 16 REMARK 465 LYS B 17 REMARK 465 ILE B 272 REMARK 465 GLY B 273 REMARK 465 ARG B 274 REMARK 465 SER B 275 REMARK 465 GLY B 276 REMARK 465 ALA B 277 REMARK 465 VAL B 278 REMARK 465 ASP B 279 REMARK 465 LYS B 280 REMARK 465 ARG B 281 REMARK 465 ALA B 282 REMARK 465 ARG B 283 REMARK 465 GLU B 284 REMARK 465 ALA B 285 REMARK 465 GLY B 286 REMARK 465 PRO B 363 REMARK 465 GLU B 364 REMARK 465 VAL B 365 REMARK 465 ASN B 366 REMARK 465 GLN B 367 REMARK 465 LYS B 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 34 CB - CG - CD ANGL. DEV. = 16.1 DEGREES REMARK 500 ARG B 192 CB - CG - CD ANGL. DEV. = 21.8 DEGREES REMARK 500 LYS B 207 CB - CG - CD ANGL. DEV. = -16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 36 73.90 48.48 REMARK 500 LEU A 57 119.41 73.39 REMARK 500 ASP A 149 33.89 -78.19 REMARK 500 ASN A 150 8.27 -161.40 REMARK 500 ARG A 189 -82.92 -66.34 REMARK 500 THR A 249 -178.22 -59.42 REMARK 500 ASP A 251 -83.01 -94.60 REMARK 500 ARG A 305 26.22 44.88 REMARK 500 PRO A 310 41.31 -71.17 REMARK 500 ASN B 29 -168.73 -73.85 REMARK 500 SER B 36 73.44 46.30 REMARK 500 SER B 75 34.49 -89.82 REMARK 500 ASP B 149 37.63 -164.46 REMARK 500 ARG B 189 -78.40 -60.05 REMARK 500 ARG B 305 18.48 50.12 REMARK 500 PRO B 310 43.11 -75.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 112 OG1 REMARK 620 2 ADP A 601 O1B 120.6 REMARK 620 3 ADP A 601 O3B 68.4 52.7 REMARK 620 4 HOH A 609 O 73.5 97.7 76.5 REMARK 620 5 HOH A 611 O 74.4 97.7 90.9 147.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 112 OG1 REMARK 620 2 ADP B 600 O1B 118.9 REMARK 620 3 ADP B 600 O3B 68.9 50.0 REMARK 620 4 HOH B 607 O 68.7 92.3 71.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N9H A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N9H B 605 DBREF 2G1Q A 1 368 UNP P52732 KIF11_HUMAN 1 368 DBREF 2G1Q B 1 368 UNP P52732 KIF11_HUMAN 1 368 SEQRES 1 A 368 MET ALA SER GLN PRO ASN SER SER ALA LYS LYS LYS GLU SEQRES 2 A 368 GLU LYS GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG SEQRES 3 A 368 PRO PHE ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER SEQRES 4 A 368 ILE VAL GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL SEQRES 5 A 368 ARG THR GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR SEQRES 6 A 368 TYR THR PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN SEQRES 7 A 368 ILE ASP VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP SEQRES 8 A 368 GLU VAL ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR SEQRES 9 A 368 GLY GLN THR GLY THR GLY LYS THR PHE THR MET GLU GLY SEQRES 10 A 368 GLU ARG SER PRO ASN GLU GLU TYR THR TRP GLU GLU ASP SEQRES 11 A 368 PRO LEU ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE SEQRES 12 A 368 PHE GLU LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL SEQRES 13 A 368 LYS VAL SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE SEQRES 14 A 368 ASP LEU LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU SEQRES 15 A 368 GLN MET PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE SEQRES 16 A 368 ILE LYS GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP SEQRES 17 A 368 GLU VAL TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG SEQRES 18 A 368 THR THR ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SEQRES 19 A 368 SER HIS SER VAL PHE SER VAL THR ILE HIS MET LYS GLU SEQRES 20 A 368 THR THR ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS SEQRES 21 A 368 LEU ASN LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY SEQRES 22 A 368 ARG SER GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY SEQRES 23 A 368 ASN ILE ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE SEQRES 24 A 368 THR ALA LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG SEQRES 25 A 368 GLU SER LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY SEQRES 26 A 368 GLY ARG THR ARG THR SER ILE ILE ALA THR ILE SER PRO SEQRES 27 A 368 ALA SER LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU SEQRES 28 A 368 TYR ALA HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO GLU SEQRES 29 A 368 VAL ASN GLN LYS SEQRES 1 B 368 MET ALA SER GLN PRO ASN SER SER ALA LYS LYS LYS GLU SEQRES 2 B 368 GLU LYS GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG SEQRES 3 B 368 PRO PHE ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER SEQRES 4 B 368 ILE VAL GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL SEQRES 5 B 368 ARG THR GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR SEQRES 6 B 368 TYR THR PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN SEQRES 7 B 368 ILE ASP VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP SEQRES 8 B 368 GLU VAL ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR SEQRES 9 B 368 GLY GLN THR GLY THR GLY LYS THR PHE THR MET GLU GLY SEQRES 10 B 368 GLU ARG SER PRO ASN GLU GLU TYR THR TRP GLU GLU ASP SEQRES 11 B 368 PRO LEU ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE SEQRES 12 B 368 PHE GLU LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL SEQRES 13 B 368 LYS VAL SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE SEQRES 14 B 368 ASP LEU LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU SEQRES 15 B 368 GLN MET PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE SEQRES 16 B 368 ILE LYS GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP SEQRES 17 B 368 GLU VAL TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG SEQRES 18 B 368 THR THR ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SEQRES 19 B 368 SER HIS SER VAL PHE SER VAL THR ILE HIS MET LYS GLU SEQRES 20 B 368 THR THR ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS SEQRES 21 B 368 LEU ASN LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY SEQRES 22 B 368 ARG SER GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY SEQRES 23 B 368 ASN ILE ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE SEQRES 24 B 368 THR ALA LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG SEQRES 25 B 368 GLU SER LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY SEQRES 26 B 368 GLY ARG THR ARG THR SER ILE ILE ALA THR ILE SER PRO SEQRES 27 B 368 ALA SER LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU SEQRES 28 B 368 TYR ALA HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO GLU SEQRES 29 B 368 VAL ASN GLN LYS HET MG A 603 1 HET ADP A 601 27 HET N9H A 604 28 HET MG B 602 1 HET ADP B 600 27 HET N9H B 605 28 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM N9H (5S)-5-(3-AMINOPROPYL)-3-(2,5-DIFLUOROPHENYL)-N-ETHYL- HETNAM 2 N9H 5-PHENYL-4,5-DIHYDRO-1H-PYRAZOLE-1-CARBOXAMIDE FORMUL 3 MG 2(MG 2+) FORMUL 4 ADP 2(C10 H15 N5 O10 P2) FORMUL 5 N9H 2(C21 H24 F2 N4 O) FORMUL 9 HOH *169(H2 O) HELIX 1 1 ASN A 29 ALA A 35 1 7 HELIX 2 2 LYS A 77 VAL A 85 1 9 HELIX 3 3 VAL A 85 MET A 95 1 11 HELIX 4 4 GLY A 110 GLU A 116 1 7 HELIX 5 5 SER A 120 GLU A 124 5 5 HELIX 6 6 GLY A 134 PHE A 144 1 11 HELIX 7 7 GLU A 145 LYS A 146 5 2 HELIX 8 8 LEU A 147 GLY A 151 5 5 HELIX 9 9 ASN A 206 MET A 228 1 23 HELIX 10 10 ALA A 230 SER A 235 1 6 HELIX 11 11 ASN A 289 GLU A 304 1 16 HELIX 12 12 PRO A 310 GLU A 313 5 4 HELIX 13 13 SER A 314 LEU A 320 1 7 HELIX 14 14 GLN A 321 LEU A 324 5 4 HELIX 15 15 ALA A 339 LEU A 341 5 3 HELIX 16 16 ASN A 342 ALA A 356 1 15 HELIX 17 17 LYS A 357 ILE A 359 5 3 HELIX 18 18 ASN B 29 ALA B 35 1 7 HELIX 19 19 LYS B 77 VAL B 85 1 9 HELIX 20 20 VAL B 85 MET B 95 1 11 HELIX 21 21 GLY B 110 GLU B 116 1 7 HELIX 22 22 SER B 120 GLU B 124 5 5 HELIX 23 23 THR B 126 ASP B 130 5 5 HELIX 24 24 GLY B 134 LEU B 147 1 14 HELIX 25 25 GLU B 209 MET B 228 1 20 HELIX 26 26 ALA B 230 SER B 235 1 6 HELIX 27 27 ASN B 289 GLU B 304 1 16 HELIX 28 28 PRO B 310 GLU B 313 5 4 HELIX 29 29 SER B 314 LEU B 320 1 7 HELIX 30 30 GLN B 321 LEU B 324 5 4 HELIX 31 31 ALA B 339 LEU B 341 5 3 HELIX 32 32 ASN B 342 LYS B 357 1 16 SHEET 1 A 8 MET A 70 PHE A 72 0 SHEET 2 A 8 GLN A 20 CYS A 25 1 N VAL A 23 O PHE A 72 SHEET 3 A 8 ARG A 329 ILE A 336 1 O ALA A 334 N VAL A 22 SHEET 4 A 8 ASN A 98 GLY A 105 1 N TYR A 104 O THR A 335 SHEET 5 A 8 GLU A 254 ASP A 265 1 O VAL A 264 N ILE A 101 SHEET 6 A 8 HIS A 236 THR A 248 -1 N ILE A 243 O GLY A 259 SHEET 7 A 8 GLU A 153 TYR A 164 -1 N SER A 159 O SER A 240 SHEET 8 A 8 GLU A 167 ASP A 170 -1 O PHE A 169 N GLU A 162 SHEET 1 B 8 MET A 70 PHE A 72 0 SHEET 2 B 8 GLN A 20 CYS A 25 1 N VAL A 23 O PHE A 72 SHEET 3 B 8 ARG A 329 ILE A 336 1 O ALA A 334 N VAL A 22 SHEET 4 B 8 ASN A 98 GLY A 105 1 N TYR A 104 O THR A 335 SHEET 5 B 8 GLU A 254 ASP A 265 1 O VAL A 264 N ILE A 101 SHEET 6 B 8 HIS A 236 THR A 248 -1 N ILE A 243 O GLY A 259 SHEET 7 B 8 GLU A 153 TYR A 164 -1 N SER A 159 O SER A 240 SHEET 8 B 8 ILE A 202 VAL A 204 -1 O VAL A 204 N VAL A 156 SHEET 1 C 3 VAL A 41 ASP A 44 0 SHEET 2 C 3 GLU A 49 ARG A 53 -1 O SER A 51 N GLU A 42 SHEET 3 C 3 ARG A 63 THR A 67 -1 O LYS A 64 N VAL A 52 SHEET 1 D 2 GLN A 183 ASP A 186 0 SHEET 2 D 2 VAL A 194 LYS A 197 -1 O ILE A 195 N PHE A 185 SHEET 1 E 8 MET B 70 PHE B 72 0 SHEET 2 E 8 GLN B 20 CYS B 25 1 N VAL B 23 O PHE B 72 SHEET 3 E 8 ARG B 329 ILE B 336 1 O ALA B 334 N VAL B 22 SHEET 4 E 8 CYS B 99 TYR B 104 1 N PHE B 102 O ILE B 333 SHEET 5 E 8 GLU B 254 ASP B 265 1 O ASN B 262 N CYS B 99 SHEET 6 E 8 HIS B 236 THR B 248 -1 N ILE B 243 O GLY B 259 SHEET 7 E 8 THR B 152 TYR B 164 -1 N LEU B 161 O VAL B 238 SHEET 8 E 8 GLU B 167 ASP B 170 -1 O PHE B 169 N GLU B 162 SHEET 1 F 8 MET B 70 PHE B 72 0 SHEET 2 F 8 GLN B 20 CYS B 25 1 N VAL B 23 O PHE B 72 SHEET 3 F 8 ARG B 329 ILE B 336 1 O ALA B 334 N VAL B 22 SHEET 4 F 8 CYS B 99 TYR B 104 1 N PHE B 102 O ILE B 333 SHEET 5 F 8 GLU B 254 ASP B 265 1 O ASN B 262 N CYS B 99 SHEET 6 F 8 HIS B 236 THR B 248 -1 N ILE B 243 O GLY B 259 SHEET 7 F 8 THR B 152 TYR B 164 -1 N LEU B 161 O VAL B 238 SHEET 8 F 8 ILE B 202 VAL B 204 -1 O VAL B 204 N VAL B 156 SHEET 1 G 3 VAL B 41 ASP B 44 0 SHEET 2 G 3 GLU B 49 LEU B 57 -1 O GLU B 49 N ASP B 44 SHEET 3 G 3 LYS B 60 THR B 67 -1 O LYS B 64 N VAL B 52 SHEET 1 H 2 GLN B 183 ASP B 186 0 SHEET 2 H 2 VAL B 194 LYS B 197 -1 O ILE B 195 N PHE B 185 LINK OG1 THR A 112 MG MG A 603 1555 1555 2.54 LINK O1B ADP A 601 MG MG A 603 1555 1555 2.90 LINK O3B ADP A 601 MG MG A 603 1555 1555 2.55 LINK MG MG A 603 O HOH A 609 1555 1555 2.48 LINK MG MG A 603 O HOH A 611 1555 1555 2.54 LINK OG1 THR B 112 MG MG B 602 1555 1555 2.56 LINK O1B ADP B 600 MG MG B 602 1555 1555 3.14 LINK O3B ADP B 600 MG MG B 602 1555 1555 2.53 LINK MG MG B 602 O HOH B 607 1555 1555 2.60 SITE 1 AC1 3 THR B 112 ADP B 600 HOH B 607 SITE 1 AC2 4 THR A 112 ADP A 601 HOH A 609 HOH A 611 SITE 1 AC3 16 ARG A 24 ARG A 26 PRO A 27 GLN A 106 SITE 2 AC3 16 THR A 107 GLY A 108 THR A 109 GLY A 110 SITE 3 AC3 16 LYS A 111 THR A 112 PHE A 113 GLU A 118 SITE 4 AC3 16 MG A 603 HOH A 611 HOH A 626 HOH A 673 SITE 1 AC4 17 ARG B 24 ARG B 26 PRO B 27 GLN B 106 SITE 2 AC4 17 THR B 107 GLY B 108 THR B 109 GLY B 110 SITE 3 AC4 17 LYS B 111 THR B 112 PHE B 113 GLU B 118 SITE 4 AC4 17 MG B 602 HOH B 607 HOH B 637 HOH B 646 SITE 5 AC4 17 HOH B 684 SITE 1 AC5 12 GLU A 116 GLY A 117 GLU A 118 ARG A 119 SITE 2 AC5 12 TRP A 127 ILE A 136 PRO A 137 LEU A 160 SITE 3 AC5 12 TYR A 211 LEU A 214 GLY A 217 ALA A 218 SITE 1 AC6 12 GLU B 116 GLY B 117 GLU B 118 ARG B 119 SITE 2 AC6 12 TRP B 127 ALA B 133 ILE B 136 PRO B 137 SITE 3 AC6 12 LEU B 214 GLY B 217 ALA B 218 ARG B 221 CRYST1 68.680 79.640 158.700 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014560 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012557 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006301 0.00000