data_2G3A # _entry.id 2G3A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2G3A pdb_00002g3a 10.2210/pdb2g3a/pdb RCSB RCSB036634 ? ? WWPDB D_1000036634 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC5884 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2G3A _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-02-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cymborowski, M.' 1 ? 'Xu, X.' 2 ? 'Chruszcz, M.' 3 ? 'Zheng, H.' 4 ? 'Gu, J.' 5 ? 'Savchenko, A.' 6 ? 'Edwards, A.' 7 ? 'Joachimiak, A.' 8 ? 'Minor, W.' 9 0000-0001-7075-7090 'Midwest Center for Structural Genomics (MCSG)' 10 ? # _citation.id primary _citation.title 'Crystal structure of putative acetyltransferase from Agrobacterium tumefaciens' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cymborowski, M.' 1 ? primary 'Xu, X.' 2 ? primary 'Chruszcz, M.' 3 ? primary 'Zheng, H.' 4 ? primary 'Gu, J.' 5 ? primary 'Savchenko, A.' 6 ? primary 'Edwards, A.' 7 ? primary 'Minor, W.' 8 0000-0001-7075-7090 # _cell.length_a 60.768 _cell.length_b 94.675 _cell.length_c 57.145 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2G3A _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 2G3A _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man acetyltransferase 17203.740 1 ? ? ? ? 2 water nat water 18.015 122 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)KPKSGAVRRLEKNT(MSE)NFVLSDVADAEAEKAIRDPLVAYNLARFGESDKRDLNITIRNDDNSVTGGLVGHTA RGWLYVQLLFVPEA(MSE)RGQGIAPKLLA(MSE)AEEEARKRGC(MSE)GAYIDT(MSE)NPDALRTYERYGFTKIGSL GPLSSGQSITWLEKRF ; _entity_poly.pdbx_seq_one_letter_code_can ;MKPKSGAVRRLEKNTMNFVLSDVADAEAEKAIRDPLVAYNLARFGESDKRDLNITIRNDDNSVTGGLVGHTARGWLYVQL LFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLGPLSSGQSITWLEKRF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC5884 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 LYS n 1 3 PRO n 1 4 LYS n 1 5 SER n 1 6 GLY n 1 7 ALA n 1 8 VAL n 1 9 ARG n 1 10 ARG n 1 11 LEU n 1 12 GLU n 1 13 LYS n 1 14 ASN n 1 15 THR n 1 16 MSE n 1 17 ASN n 1 18 PHE n 1 19 VAL n 1 20 LEU n 1 21 SER n 1 22 ASP n 1 23 VAL n 1 24 ALA n 1 25 ASP n 1 26 ALA n 1 27 GLU n 1 28 ALA n 1 29 GLU n 1 30 LYS n 1 31 ALA n 1 32 ILE n 1 33 ARG n 1 34 ASP n 1 35 PRO n 1 36 LEU n 1 37 VAL n 1 38 ALA n 1 39 TYR n 1 40 ASN n 1 41 LEU n 1 42 ALA n 1 43 ARG n 1 44 PHE n 1 45 GLY n 1 46 GLU n 1 47 SER n 1 48 ASP n 1 49 LYS n 1 50 ARG n 1 51 ASP n 1 52 LEU n 1 53 ASN n 1 54 ILE n 1 55 THR n 1 56 ILE n 1 57 ARG n 1 58 ASN n 1 59 ASP n 1 60 ASP n 1 61 ASN n 1 62 SER n 1 63 VAL n 1 64 THR n 1 65 GLY n 1 66 GLY n 1 67 LEU n 1 68 VAL n 1 69 GLY n 1 70 HIS n 1 71 THR n 1 72 ALA n 1 73 ARG n 1 74 GLY n 1 75 TRP n 1 76 LEU n 1 77 TYR n 1 78 VAL n 1 79 GLN n 1 80 LEU n 1 81 LEU n 1 82 PHE n 1 83 VAL n 1 84 PRO n 1 85 GLU n 1 86 ALA n 1 87 MSE n 1 88 ARG n 1 89 GLY n 1 90 GLN n 1 91 GLY n 1 92 ILE n 1 93 ALA n 1 94 PRO n 1 95 LYS n 1 96 LEU n 1 97 LEU n 1 98 ALA n 1 99 MSE n 1 100 ALA n 1 101 GLU n 1 102 GLU n 1 103 GLU n 1 104 ALA n 1 105 ARG n 1 106 LYS n 1 107 ARG n 1 108 GLY n 1 109 CYS n 1 110 MSE n 1 111 GLY n 1 112 ALA n 1 113 TYR n 1 114 ILE n 1 115 ASP n 1 116 THR n 1 117 MSE n 1 118 ASN n 1 119 PRO n 1 120 ASP n 1 121 ALA n 1 122 LEU n 1 123 ARG n 1 124 THR n 1 125 TYR n 1 126 GLU n 1 127 ARG n 1 128 TYR n 1 129 GLY n 1 130 PHE n 1 131 THR n 1 132 LYS n 1 133 ILE n 1 134 GLY n 1 135 SER n 1 136 LEU n 1 137 GLY n 1 138 PRO n 1 139 LEU n 1 140 SER n 1 141 SER n 1 142 GLY n 1 143 GLN n 1 144 SER n 1 145 ILE n 1 146 THR n 1 147 TRP n 1 148 LEU n 1 149 GLU n 1 150 LYS n 1 151 ARG n 1 152 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Agrobacterium _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Agrobacterium tumefaciens' _entity_src_gen.gene_src_strain 'C58 / ATCC 33970' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Agrobacterium tumefaciens str. C58' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 176299 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21 Gold (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7CXI0_AGRT5 _struct_ref.pdbx_db_accession Q7CXI0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNFVLSDVADAEAEKAIRDPLVAYNLARFGESDKRDLNITIRNDDNSVTGGLVGHTARGWLYVQLLFVPEAMRGQGIAPK LLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLGPLSSGQSITWLEKRF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2G3A _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 16 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7CXI0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 137 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 137 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2G3A MSE A 1 ? UNP Q7CXI0 ? ? 'cloning artifact' -14 1 1 2G3A LYS A 2 ? UNP Q7CXI0 ? ? 'cloning artifact' -13 2 1 2G3A PRO A 3 ? UNP Q7CXI0 ? ? 'cloning artifact' -12 3 1 2G3A LYS A 4 ? UNP Q7CXI0 ? ? 'cloning artifact' -11 4 1 2G3A SER A 5 ? UNP Q7CXI0 ? ? 'cloning artifact' -10 5 1 2G3A GLY A 6 ? UNP Q7CXI0 ? ? 'cloning artifact' -9 6 1 2G3A ALA A 7 ? UNP Q7CXI0 ? ? 'cloning artifact' -8 7 1 2G3A VAL A 8 ? UNP Q7CXI0 ? ? 'cloning artifact' -7 8 1 2G3A ARG A 9 ? UNP Q7CXI0 ? ? 'cloning artifact' -6 9 1 2G3A ARG A 10 ? UNP Q7CXI0 ? ? 'cloning artifact' -5 10 1 2G3A LEU A 11 ? UNP Q7CXI0 ? ? 'cloning artifact' -4 11 1 2G3A GLU A 12 ? UNP Q7CXI0 ? ? 'cloning artifact' -3 12 1 2G3A LYS A 13 ? UNP Q7CXI0 ? ? 'cloning artifact' -2 13 1 2G3A ASN A 14 ? UNP Q7CXI0 ? ? 'cloning artifact' -1 14 1 2G3A THR A 15 ? UNP Q7CXI0 ? ? 'cloning artifact' 0 15 1 2G3A MSE A 16 ? UNP Q7CXI0 MET 1 'modified residue' 1 16 1 2G3A MSE A 87 ? UNP Q7CXI0 MET 72 'modified residue' 72 17 1 2G3A MSE A 99 ? UNP Q7CXI0 MET 84 'modified residue' 84 18 1 2G3A MSE A 110 ? UNP Q7CXI0 MET 95 'modified residue' 95 19 1 2G3A MSE A 117 ? UNP Q7CXI0 MET 102 'modified residue' 102 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2G3A _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Hepes, pH 8.0, 0.1M CaCl2, 28% PEG 400, 3% MPD, 1mM AcetylCOA, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC _diffrn_detector.pdbx_collection_date 2006-02-10 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'SI 111 CHANNEL' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97924 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97924 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.entry_id 2G3A _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50 _reflns.number_all 13028 _reflns.number_obs 13028 _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 32.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.92 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 82.0 _reflns_shell.Rmerge_I_obs 0.39 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 5.6 _reflns_shell.number_unique_all 337 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 1.9 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F ? _refine.ls_percent_reflns_obs 96.740 _refine.ls_number_reflns_obs 13028 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_all 0.188 _refine.ls_R_factor_R_work 0.186 _refine.ls_R_factor_R_free 0.227 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 650 _refine.B_iso_mean 29.492 _refine.aniso_B[1][1] -2.220 _refine.aniso_B[2][2] 4.070 _refine.aniso_B[3][3] -1.850 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.overall_SU_R_Cruickshank_DPI 0.145 _refine.pdbx_overall_ESU_R_Free 0.138 _refine.overall_SU_ML 0.101 _refine.overall_SU_B 6.530 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.entry_id 2G3A _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 13028 _refine.ls_R_factor_obs 0.188 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1067 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 1189 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1108 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.144 1.967 ? 1501 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.399 5.000 ? 144 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.260 22.885 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.674 15.000 ? 194 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.067 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 164 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 849 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.206 0.200 ? 443 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.299 0.200 ? 754 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.135 0.200 ? 90 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.183 0.200 ? 74 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.120 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.095 3.000 ? 718 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.402 5.000 ? 1101 'X-RAY DIFFRACTION' ? r_scbond_it 4.224 8.000 ? 454 'X-RAY DIFFRACTION' ? r_scangle_it 5.822 11.000 ? 396 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.9 _refine_ls_shell.d_res_low 1.943 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 78.430 _refine_ls_shell.number_reflns_R_work 722 _refine_ls_shell.R_factor_R_work 0.198 _refine_ls_shell.R_factor_R_free 0.251 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2G3A _struct.title 'Crystal structure of putative acetyltransferase from Agrobacterium tumefaciens' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2G3A _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;acetyltransferase, structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 25 ? GLY A 45 ? ASP A 10 GLY A 30 1 ? 21 HELX_P HELX_P2 2 PRO A 84 ? ARG A 88 ? PRO A 69 ARG A 73 5 ? 5 HELX_P HELX_P3 3 GLY A 91 ? ARG A 107 ? GLY A 76 ARG A 92 1 ? 17 HELX_P HELX_P4 4 ASN A 118 ? GLY A 129 ? ASN A 103 GLY A 114 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 16 C ? ? ? 1_555 A ASN 17 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A ALA 86 C ? ? ? 1_555 A MSE 87 N ? ? A ALA 71 A MSE 72 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A MSE 87 C ? ? ? 1_555 A ARG 88 N ? ? A MSE 72 A ARG 73 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A ALA 98 C ? ? ? 1_555 A MSE 99 N ? ? A ALA 83 A MSE 84 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A MSE 99 C ? ? ? 1_555 A ALA 100 N ? ? A MSE 84 A ALA 85 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A CYS 109 C ? ? ? 1_555 A MSE 110 N ? ? A CYS 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? A MSE 110 C ? ? ? 1_555 A GLY 111 N ? ? A MSE 95 A GLY 96 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale8 covale both ? A THR 116 C ? ? ? 1_555 A MSE 117 N ? ? A THR 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? A MSE 117 C ? ? ? 1_555 A ASN 118 N ? ? A MSE 102 A ASN 103 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 137 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 122 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 138 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 123 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.84 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 50 ? ARG A 57 ? ARG A 35 ARG A 42 A 2 VAL A 63 ? ALA A 72 ? VAL A 48 ALA A 57 A 3 TRP A 75 ? PHE A 82 ? TRP A 60 PHE A 67 A 4 GLY A 111 ? THR A 116 ? GLY A 96 THR A 101 A 5 ILE A 145 ? ARG A 151 ? ILE A 130 ARG A 136 A 6 THR A 131 ? LEU A 136 ? THR A 116 LEU A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 56 ? N ILE A 41 O THR A 64 ? O THR A 49 A 2 3 N HIS A 70 ? N HIS A 55 O TYR A 77 ? O TYR A 62 A 3 4 N LEU A 76 ? N LEU A 61 O TYR A 113 ? O TYR A 98 A 4 5 N ILE A 114 ? N ILE A 99 O LEU A 148 ? O LEU A 133 A 5 6 O TRP A 147 ? O TRP A 132 N ILE A 133 ? N ILE A 118 # _atom_sites.entry_id 2G3A _atom_sites.fract_transf_matrix[1][1] 0.0165 _atom_sites.fract_transf_matrix[1][2] 0.0000 _atom_sites.fract_transf_matrix[1][3] 0.0000 _atom_sites.fract_transf_matrix[2][1] 0.0000 _atom_sites.fract_transf_matrix[2][2] 0.0106 _atom_sites.fract_transf_matrix[2][3] 0.0000 _atom_sites.fract_transf_matrix[3][1] 0.0000 _atom_sites.fract_transf_matrix[3][2] 0.0000 _atom_sites.fract_transf_matrix[3][3] 0.0175 _atom_sites.fract_transf_vector[1] 0.0000 _atom_sites.fract_transf_vector[2] 0.0000 _atom_sites.fract_transf_vector[3] 0.0000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -14 ? ? ? A . n A 1 2 LYS 2 -13 ? ? ? A . n A 1 3 PRO 3 -12 ? ? ? A . n A 1 4 LYS 4 -11 ? ? ? A . n A 1 5 SER 5 -10 ? ? ? A . n A 1 6 GLY 6 -9 ? ? ? A . n A 1 7 ALA 7 -8 ? ? ? A . n A 1 8 VAL 8 -7 ? ? ? A . n A 1 9 ARG 9 -6 ? ? ? A . n A 1 10 ARG 10 -5 ? ? ? A . n A 1 11 LEU 11 -4 ? ? ? A . n A 1 12 GLU 12 -3 ? ? ? A . n A 1 13 LYS 13 -2 ? ? ? A . n A 1 14 ASN 14 -1 ? ? ? A . n A 1 15 THR 15 0 ? ? ? A . n A 1 16 MSE 16 1 1 MSE MSE A . n A 1 17 ASN 17 2 2 ASN ASN A . n A 1 18 PHE 18 3 3 PHE PHE A . n A 1 19 VAL 19 4 4 VAL VAL A . n A 1 20 LEU 20 5 5 LEU LEU A . n A 1 21 SER 21 6 6 SER SER A . n A 1 22 ASP 22 7 7 ASP ASP A . n A 1 23 VAL 23 8 8 VAL VAL A . n A 1 24 ALA 24 9 9 ALA ALA A . n A 1 25 ASP 25 10 10 ASP ASP A . n A 1 26 ALA 26 11 11 ALA ALA A . n A 1 27 GLU 27 12 12 GLU GLU A . n A 1 28 ALA 28 13 13 ALA ALA A . n A 1 29 GLU 29 14 14 GLU GLU A . n A 1 30 LYS 30 15 15 LYS LYS A . n A 1 31 ALA 31 16 16 ALA ALA A . n A 1 32 ILE 32 17 17 ILE ILE A . n A 1 33 ARG 33 18 18 ARG ARG A . n A 1 34 ASP 34 19 19 ASP ASP A . n A 1 35 PRO 35 20 20 PRO PRO A . n A 1 36 LEU 36 21 21 LEU LEU A . n A 1 37 VAL 37 22 22 VAL VAL A . n A 1 38 ALA 38 23 23 ALA ALA A . n A 1 39 TYR 39 24 24 TYR TYR A . n A 1 40 ASN 40 25 25 ASN ASN A . n A 1 41 LEU 41 26 26 LEU LEU A . n A 1 42 ALA 42 27 27 ALA ALA A . n A 1 43 ARG 43 28 28 ARG ARG A . n A 1 44 PHE 44 29 29 PHE PHE A . n A 1 45 GLY 45 30 30 GLY GLY A . n A 1 46 GLU 46 31 31 GLU GLU A . n A 1 47 SER 47 32 32 SER SER A . n A 1 48 ASP 48 33 33 ASP ASP A . n A 1 49 LYS 49 34 34 LYS LYS A . n A 1 50 ARG 50 35 35 ARG ARG A . n A 1 51 ASP 51 36 36 ASP ASP A . n A 1 52 LEU 52 37 37 LEU LEU A . n A 1 53 ASN 53 38 38 ASN ASN A . n A 1 54 ILE 54 39 39 ILE ILE A . n A 1 55 THR 55 40 40 THR THR A . n A 1 56 ILE 56 41 41 ILE ILE A . n A 1 57 ARG 57 42 42 ARG ARG A . n A 1 58 ASN 58 43 43 ASN ASN A . n A 1 59 ASP 59 44 44 ASP ASP A . n A 1 60 ASP 60 45 45 ASP ASP A . n A 1 61 ASN 61 46 46 ASN ASN A . n A 1 62 SER 62 47 47 SER SER A . n A 1 63 VAL 63 48 48 VAL VAL A . n A 1 64 THR 64 49 49 THR THR A . n A 1 65 GLY 65 50 50 GLY GLY A . n A 1 66 GLY 66 51 51 GLY GLY A . n A 1 67 LEU 67 52 52 LEU LEU A . n A 1 68 VAL 68 53 53 VAL VAL A . n A 1 69 GLY 69 54 54 GLY GLY A . n A 1 70 HIS 70 55 55 HIS HIS A . n A 1 71 THR 71 56 56 THR THR A . n A 1 72 ALA 72 57 57 ALA ALA A . n A 1 73 ARG 73 58 58 ARG ARG A . n A 1 74 GLY 74 59 59 GLY GLY A . n A 1 75 TRP 75 60 60 TRP TRP A . n A 1 76 LEU 76 61 61 LEU LEU A . n A 1 77 TYR 77 62 62 TYR TYR A . n A 1 78 VAL 78 63 63 VAL VAL A . n A 1 79 GLN 79 64 64 GLN GLN A . n A 1 80 LEU 80 65 65 LEU LEU A . n A 1 81 LEU 81 66 66 LEU LEU A . n A 1 82 PHE 82 67 67 PHE PHE A . n A 1 83 VAL 83 68 68 VAL VAL A . n A 1 84 PRO 84 69 69 PRO PRO A . n A 1 85 GLU 85 70 70 GLU GLU A . n A 1 86 ALA 86 71 71 ALA ALA A . n A 1 87 MSE 87 72 72 MSE MSE A . n A 1 88 ARG 88 73 73 ARG ARG A . n A 1 89 GLY 89 74 74 GLY GLY A . n A 1 90 GLN 90 75 75 GLN GLN A . n A 1 91 GLY 91 76 76 GLY GLY A . n A 1 92 ILE 92 77 77 ILE ILE A . n A 1 93 ALA 93 78 78 ALA ALA A . n A 1 94 PRO 94 79 79 PRO PRO A . n A 1 95 LYS 95 80 80 LYS LYS A . n A 1 96 LEU 96 81 81 LEU LEU A . n A 1 97 LEU 97 82 82 LEU LEU A . n A 1 98 ALA 98 83 83 ALA ALA A . n A 1 99 MSE 99 84 84 MSE MSE A . n A 1 100 ALA 100 85 85 ALA ALA A . n A 1 101 GLU 101 86 86 GLU GLU A . n A 1 102 GLU 102 87 87 GLU GLU A . n A 1 103 GLU 103 88 88 GLU GLU A . n A 1 104 ALA 104 89 89 ALA ALA A . n A 1 105 ARG 105 90 90 ARG ARG A . n A 1 106 LYS 106 91 91 LYS LYS A . n A 1 107 ARG 107 92 92 ARG ARG A . n A 1 108 GLY 108 93 93 GLY GLY A . n A 1 109 CYS 109 94 94 CYS CYS A . n A 1 110 MSE 110 95 95 MSE MSE A . n A 1 111 GLY 111 96 96 GLY GLY A . n A 1 112 ALA 112 97 97 ALA ALA A . n A 1 113 TYR 113 98 98 TYR TYR A . n A 1 114 ILE 114 99 99 ILE ILE A . n A 1 115 ASP 115 100 100 ASP ASP A . n A 1 116 THR 116 101 101 THR THR A . n A 1 117 MSE 117 102 102 MSE MSE A . n A 1 118 ASN 118 103 103 ASN ASN A . n A 1 119 PRO 119 104 104 PRO PRO A . n A 1 120 ASP 120 105 105 ASP ASP A . n A 1 121 ALA 121 106 106 ALA ALA A . n A 1 122 LEU 122 107 107 LEU LEU A . n A 1 123 ARG 123 108 108 ARG ARG A . n A 1 124 THR 124 109 109 THR THR A . n A 1 125 TYR 125 110 110 TYR TYR A . n A 1 126 GLU 126 111 111 GLU GLU A . n A 1 127 ARG 127 112 112 ARG ARG A . n A 1 128 TYR 128 113 113 TYR TYR A . n A 1 129 GLY 129 114 114 GLY GLY A . n A 1 130 PHE 130 115 115 PHE PHE A . n A 1 131 THR 131 116 116 THR THR A . n A 1 132 LYS 132 117 117 LYS LYS A . n A 1 133 ILE 133 118 118 ILE ILE A . n A 1 134 GLY 134 119 119 GLY GLY A . n A 1 135 SER 135 120 120 SER SER A . n A 1 136 LEU 136 121 121 LEU LEU A . n A 1 137 GLY 137 122 122 GLY GLY A . n A 1 138 PRO 138 123 123 PRO PRO A . n A 1 139 LEU 139 124 124 LEU LEU A . n A 1 140 SER 140 125 125 SER SER A . n A 1 141 SER 141 126 126 SER SER A . n A 1 142 GLY 142 127 127 GLY GLY A . n A 1 143 GLN 143 128 128 GLN GLN A . n A 1 144 SER 144 129 129 SER SER A . n A 1 145 ILE 145 130 130 ILE ILE A . n A 1 146 THR 146 131 131 THR THR A . n A 1 147 TRP 147 132 132 TRP TRP A . n A 1 148 LEU 148 133 133 LEU LEU A . n A 1 149 GLU 149 134 134 GLU GLU A . n A 1 150 LYS 150 135 135 LYS LYS A . n A 1 151 ARG 151 136 136 ARG ARG A . n A 1 152 PHE 152 137 137 PHE PHE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 138 4 HOH HOH A . B 2 HOH 2 139 6 HOH HOH A . B 2 HOH 3 140 7 HOH HOH A . B 2 HOH 4 141 8 HOH HOH A . B 2 HOH 5 142 9 HOH HOH A . B 2 HOH 6 143 10 HOH HOH A . B 2 HOH 7 144 11 HOH HOH A . B 2 HOH 8 145 12 HOH HOH A . B 2 HOH 9 146 13 HOH HOH A . B 2 HOH 10 147 14 HOH HOH A . B 2 HOH 11 148 16 HOH HOH A . B 2 HOH 12 149 17 HOH HOH A . B 2 HOH 13 150 18 HOH HOH A . B 2 HOH 14 151 19 HOH HOH A . B 2 HOH 15 152 20 HOH HOH A . B 2 HOH 16 153 21 HOH HOH A . B 2 HOH 17 154 22 HOH HOH A . B 2 HOH 18 155 23 HOH HOH A . B 2 HOH 19 156 24 HOH HOH A . B 2 HOH 20 157 25 HOH HOH A . B 2 HOH 21 158 26 HOH HOH A . B 2 HOH 22 159 27 HOH HOH A . B 2 HOH 23 160 28 HOH HOH A . B 2 HOH 24 161 29 HOH HOH A . B 2 HOH 25 162 30 HOH HOH A . B 2 HOH 26 163 31 HOH HOH A . B 2 HOH 27 164 32 HOH HOH A . B 2 HOH 28 165 33 HOH HOH A . B 2 HOH 29 166 34 HOH HOH A . B 2 HOH 30 167 35 HOH HOH A . B 2 HOH 31 168 36 HOH HOH A . B 2 HOH 32 169 37 HOH HOH A . B 2 HOH 33 170 38 HOH HOH A . B 2 HOH 34 171 39 HOH HOH A . B 2 HOH 35 172 40 HOH HOH A . B 2 HOH 36 173 42 HOH HOH A . B 2 HOH 37 174 44 HOH HOH A . B 2 HOH 38 175 45 HOH HOH A . B 2 HOH 39 176 46 HOH HOH A . B 2 HOH 40 177 47 HOH HOH A . B 2 HOH 41 178 48 HOH HOH A . B 2 HOH 42 179 49 HOH HOH A . B 2 HOH 43 180 50 HOH HOH A . B 2 HOH 44 181 51 HOH HOH A . B 2 HOH 45 182 52 HOH HOH A . B 2 HOH 46 183 53 HOH HOH A . B 2 HOH 47 184 54 HOH HOH A . B 2 HOH 48 185 55 HOH HOH A . B 2 HOH 49 186 56 HOH HOH A . B 2 HOH 50 187 57 HOH HOH A . B 2 HOH 51 188 58 HOH HOH A . B 2 HOH 52 189 59 HOH HOH A . B 2 HOH 53 190 61 HOH HOH A . B 2 HOH 54 191 63 HOH HOH A . B 2 HOH 55 192 64 HOH HOH A . B 2 HOH 56 193 65 HOH HOH A . B 2 HOH 57 194 66 HOH HOH A . B 2 HOH 58 195 67 HOH HOH A . B 2 HOH 59 196 68 HOH HOH A . B 2 HOH 60 197 69 HOH HOH A . B 2 HOH 61 198 70 HOH HOH A . B 2 HOH 62 199 71 HOH HOH A . B 2 HOH 63 200 72 HOH HOH A . B 2 HOH 64 201 73 HOH HOH A . B 2 HOH 65 202 74 HOH HOH A . B 2 HOH 66 203 77 HOH HOH A . B 2 HOH 67 204 78 HOH HOH A . B 2 HOH 68 205 79 HOH HOH A . B 2 HOH 69 206 80 HOH HOH A . B 2 HOH 70 207 81 HOH HOH A . B 2 HOH 71 208 82 HOH HOH A . B 2 HOH 72 209 83 HOH HOH A . B 2 HOH 73 210 84 HOH HOH A . B 2 HOH 74 211 85 HOH HOH A . B 2 HOH 75 212 86 HOH HOH A . B 2 HOH 76 213 87 HOH HOH A . B 2 HOH 77 214 88 HOH HOH A . B 2 HOH 78 215 89 HOH HOH A . B 2 HOH 79 216 90 HOH HOH A . B 2 HOH 80 217 91 HOH HOH A . B 2 HOH 81 218 92 HOH HOH A . B 2 HOH 82 219 93 HOH HOH A . B 2 HOH 83 220 95 HOH HOH A . B 2 HOH 84 221 96 HOH HOH A . B 2 HOH 85 222 98 HOH HOH A . B 2 HOH 86 223 99 HOH HOH A . B 2 HOH 87 224 100 HOH HOH A . B 2 HOH 88 225 101 HOH HOH A . B 2 HOH 89 226 102 HOH HOH A . B 2 HOH 90 227 103 HOH HOH A . B 2 HOH 91 228 105 HOH HOH A . B 2 HOH 92 229 106 HOH HOH A . B 2 HOH 93 230 107 HOH HOH A . B 2 HOH 94 231 108 HOH HOH A . B 2 HOH 95 232 109 HOH HOH A . B 2 HOH 96 233 110 HOH HOH A . B 2 HOH 97 234 111 HOH HOH A . B 2 HOH 98 235 112 HOH HOH A . B 2 HOH 99 236 113 HOH HOH A . B 2 HOH 100 237 114 HOH HOH A . B 2 HOH 101 238 115 HOH HOH A . B 2 HOH 102 239 117 HOH HOH A . B 2 HOH 103 240 118 HOH HOH A . B 2 HOH 104 241 119 HOH HOH A . B 2 HOH 105 242 120 HOH HOH A . B 2 HOH 106 243 121 HOH HOH A . B 2 HOH 107 244 122 HOH HOH A . B 2 HOH 108 245 123 HOH HOH A . B 2 HOH 109 246 124 HOH HOH A . B 2 HOH 110 247 125 HOH HOH A . B 2 HOH 111 248 126 HOH HOH A . B 2 HOH 112 249 127 HOH HOH A . B 2 HOH 113 250 128 HOH HOH A . B 2 HOH 114 251 129 HOH HOH A . B 2 HOH 115 252 130 HOH HOH A . B 2 HOH 116 253 131 HOH HOH A . B 2 HOH 117 254 132 HOH HOH A . B 2 HOH 118 255 133 HOH HOH A . B 2 HOH 119 256 134 HOH HOH A . B 2 HOH 120 257 135 HOH HOH A . B 2 HOH 121 258 136 HOH HOH A . B 2 HOH 122 259 137 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 16 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 87 A MSE 72 ? MET SELENOMETHIONINE 3 A MSE 99 A MSE 84 ? MET SELENOMETHIONINE 4 A MSE 110 A MSE 95 ? MET SELENOMETHIONINE 5 A MSE 117 A MSE 102 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6320 ? 1 MORE -45 ? 1 'SSA (A^2)' 13400 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 60.7680000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 28.5725000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-03-14 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-10-05 5 'Structure model' 1 4 2022-04-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' audit_author 2 5 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_audit_author.identifier_ORCID' 2 5 'Structure model' '_citation_author.identifier_ORCID' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? ? 43.0679 -9.1691 14.5905 0.0185 -0.1630 0.0906 0.0200 0.0314 0.0665 4.2456 0.8660 7.9678 1.2120 0.2460 1.7827 -0.0411 -0.0440 0.0850 0.3346 0.9140 0.1501 -0.0856 -0.7371 0.1182 'X-RAY DIFFRACTION' 2 ? ? 19.8339 -18.7669 7.5614 -0.0565 -0.0789 -0.0521 -0.0093 0.0089 -0.0083 2.8395 1.0642 2.1922 -0.4869 -0.1055 -0.7160 0.0705 -0.0334 -0.0371 0.0980 0.2383 0.0773 0.0088 -0.1081 -0.0734 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 16 A 48 ALL A 1 A 33 'X-RAY DIFFRACTION' ? 2 2 A 49 A 152 ALL A 34 A 137 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 PDB_EXTRACT 1.401 'March 3, 2004' program H.Yang sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C/C++ ? 2 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 3 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 4 HKL-3000 . ? ? ? ? phasing ? ? ? 5 SHELXD . ? ? ? ? phasing ? ? ? 6 SHELXE . ? ? ? ? 'model building' ? ? ? 7 MLPHARE . ? ? ? ? phasing ? ? ? 8 DM . ? ? ? ? phasing ? ? ? 9 SOLVE . ? ? ? ? phasing ? ? ? 10 RESOLVE . ? ? ? ? phasing ? ? ? 11 Coot . ? ? ? ? 'model building' ? ? ? 12 CCP4 . ? ? ? ? phasing ? ? ? 13 O . ? ? ? ? 'model building' ? ? ? 14 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 75 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -141.19 _pdbx_validate_torsion.psi 21.68 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -14 ? A MSE 1 2 1 Y 1 A LYS -13 ? A LYS 2 3 1 Y 1 A PRO -12 ? A PRO 3 4 1 Y 1 A LYS -11 ? A LYS 4 5 1 Y 1 A SER -10 ? A SER 5 6 1 Y 1 A GLY -9 ? A GLY 6 7 1 Y 1 A ALA -8 ? A ALA 7 8 1 Y 1 A VAL -7 ? A VAL 8 9 1 Y 1 A ARG -6 ? A ARG 9 10 1 Y 1 A ARG -5 ? A ARG 10 11 1 Y 1 A LEU -4 ? A LEU 11 12 1 Y 1 A GLU -3 ? A GLU 12 13 1 Y 1 A LYS -2 ? A LYS 13 14 1 Y 1 A ASN -1 ? A ASN 14 15 1 Y 1 A THR 0 ? A THR 15 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #