HEADER PROTEIN BINDING 10-MAR-06 2GBM TITLE CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANT OF UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRS KEYWDS LOOP INSERTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.M.FERRARO,D.J.FERRARO,S.RAMASWAMY,A.D.ROBERTSON REVDAT 4 30-AUG-23 2GBM 1 REMARK SEQADV LINK REVDAT 3 18-OCT-17 2GBM 1 REMARK REVDAT 2 24-FEB-09 2GBM 1 VERSN REVDAT 1 16-MAY-06 2GBM 0 JRNL AUTH D.M.FERRARO,D.J.FERRARO,S.RAMASWAMY,A.D.ROBERTSON JRNL TITL STRUCTURES OF UBIQUITIN INSERTION MUTANTS SUPPORT JRNL TITL 2 SITE-SPECIFIC REFLEX RESPONSE TO INSERTIONS HYPOTHESIS. JRNL REF J.MOL.BIOL. V. 359 390 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16647719 JRNL DOI 10.1016/J.JMB.2006.03.047 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 44135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2223 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3041 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.1610 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 361 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : 0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.092 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.199 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2475 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1725 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3321 ; 1.391 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4270 ; 0.796 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 317 ; 5.066 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;34.790 ;26.296 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 486 ;12.598 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;13.995 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 381 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2723 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 417 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 510 ; 0.313 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1782 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1187 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1357 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 235 ; 0.163 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.141 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 53 ; 0.224 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.168 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2021 ; 1.660 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 674 ; 0.569 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2522 ; 2.013 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 995 ; 3.597 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 799 ; 5.007 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GBM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036925. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SI(111) REMARK 200 DOUBLE-CRYSTAL SYSTEM REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : JDIRECTOR REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44135 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 19.511 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.17900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 10.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1UBQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25-30% PEG 4000, 50 MM SODIUM REMARK 280 CACODYLATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K, PH 5.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.40850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.57350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.89300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.57350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.40850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.89300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE MONOMER IS BELIEVED TO BE THE ACTIVE BIOLOGICAL REMARK 300 ASSEMBLY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 82 REMARK 465 GLY A 83 REMARK 465 GLY A 84 REMARK 465 LEU B 81 REMARK 465 ARG B 82 REMARK 465 GLY B 83 REMARK 465 GLY B 84 REMARK 465 LEU C 81 REMARK 465 ARG C 82 REMARK 465 GLY C 83 REMARK 465 GLY C 84 REMARK 465 LEU D 81 REMARK 465 ARG D 82 REMARK 465 GLY D 83 REMARK 465 GLY D 84 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP D 66 O HOH D 506 2.06 REMARK 500 NE2 HIS C 76 O HOH C 525 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ARS B 503 AS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 24 OE1 REMARK 620 2 ASP B 60 OD2 95.1 REMARK 620 3 HOH B 589 O 175.8 89.0 REMARK 620 4 HOH B 590 O 94.9 101.2 83.2 REMARK 620 5 ASP C 47 OD1 84.3 160.4 92.2 98.3 REMARK 620 6 ASP C 47 OD2 91.3 102.2 88.8 155.1 58.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ARS C 501 AS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 47 OD2 REMARK 620 2 ASP B 47 OD1 58.8 REMARK 620 3 GLU C 24 OE1 91.8 85.7 REMARK 620 4 ASP C 60 OD2 101.0 159.7 96.3 REMARK 620 5 HOH C 588 O 156.9 99.0 92.5 101.0 REMARK 620 6 HOH C 589 O 90.2 90.7 174.1 88.7 83.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ARS D 502 AS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 24 OE1 REMARK 620 2 ASP D 60 OD2 95.2 REMARK 620 3 HOH D 591 O 125.8 98.5 REMARK 620 4 HOH D 592 O 108.0 114.1 113.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARS C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARS D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARS B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GBJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 9-10 8 GLYCINE INSERTION MUTANT OF REMARK 900 UBIQUITIN REMARK 900 RELATED ID: 2GBK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 9-10 MOAD INSERTION MUTANT OF THE SAME REMARK 900 PROTEIN REMARK 900 RELATED ID: 2GBN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANT OF THE REMARK 900 SAME PROTEIN REMARK 900 RELATED ID: 2GBR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 35-36 MOAD INSERTION MUTANT OF THE SAME REMARK 900 PROTEIN DBREF 2GBM A 1 84 UNP P62988 UBIQ_HUMAN 1 76 DBREF 2GBM B 1 84 UNP P62988 UBIQ_HUMAN 1 76 DBREF 2GBM C 1 84 UNP P62988 UBIQ_HUMAN 1 76 DBREF 2GBM D 1 84 UNP P62988 UBIQ_HUMAN 1 76 SEQADV 2GBM GLY A 35 UNP P62988 INSERTION SEQADV 2GBM GLY A 36 UNP P62988 INSERTION SEQADV 2GBM GLY A 37 UNP P62988 INSERTION SEQADV 2GBM GLY A 38 UNP P62988 INSERTION SEQADV 2GBM GLY A 39 UNP P62988 INSERTION SEQADV 2GBM GLY A 40 UNP P62988 INSERTION SEQADV 2GBM GLY A 41 UNP P62988 INSERTION SEQADV 2GBM GLY A 42 UNP P62988 INSERTION SEQADV 2GBM GLY B 35 UNP P62988 INSERTION SEQADV 2GBM GLY B 36 UNP P62988 INSERTION SEQADV 2GBM GLY B 37 UNP P62988 INSERTION SEQADV 2GBM GLY B 38 UNP P62988 INSERTION SEQADV 2GBM GLY B 39 UNP P62988 INSERTION SEQADV 2GBM GLY B 40 UNP P62988 INSERTION SEQADV 2GBM GLY B 41 UNP P62988 INSERTION SEQADV 2GBM GLY B 42 UNP P62988 INSERTION SEQADV 2GBM GLY C 35 UNP P62988 INSERTION SEQADV 2GBM GLY C 36 UNP P62988 INSERTION SEQADV 2GBM GLY C 37 UNP P62988 INSERTION SEQADV 2GBM GLY C 38 UNP P62988 INSERTION SEQADV 2GBM GLY C 39 UNP P62988 INSERTION SEQADV 2GBM GLY C 40 UNP P62988 INSERTION SEQADV 2GBM GLY C 41 UNP P62988 INSERTION SEQADV 2GBM GLY C 42 UNP P62988 INSERTION SEQADV 2GBM GLY D 35 UNP P62988 INSERTION SEQADV 2GBM GLY D 36 UNP P62988 INSERTION SEQADV 2GBM GLY D 37 UNP P62988 INSERTION SEQADV 2GBM GLY D 38 UNP P62988 INSERTION SEQADV 2GBM GLY D 39 UNP P62988 INSERTION SEQADV 2GBM GLY D 40 UNP P62988 INSERTION SEQADV 2GBM GLY D 41 UNP P62988 INSERTION SEQADV 2GBM GLY D 42 UNP P62988 INSERTION SEQRES 1 A 84 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 A 84 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 A 84 LYS ALA LYS ILE GLN ASP LYS GLU GLY GLY GLY GLY GLY SEQRES 4 A 84 GLY GLY GLY GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE SEQRES 5 A 84 PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 A 84 ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL SEQRES 7 A 84 LEU ARG LEU ARG GLY GLY SEQRES 1 B 84 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 B 84 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 B 84 LYS ALA LYS ILE GLN ASP LYS GLU GLY GLY GLY GLY GLY SEQRES 4 B 84 GLY GLY GLY GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE SEQRES 5 B 84 PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 B 84 ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL SEQRES 7 B 84 LEU ARG LEU ARG GLY GLY SEQRES 1 C 84 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 C 84 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 C 84 LYS ALA LYS ILE GLN ASP LYS GLU GLY GLY GLY GLY GLY SEQRES 4 C 84 GLY GLY GLY GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE SEQRES 5 C 84 PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 C 84 ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL SEQRES 7 C 84 LEU ARG LEU ARG GLY GLY SEQRES 1 D 84 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 D 84 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 84 LYS ALA LYS ILE GLN ASP LYS GLU GLY GLY GLY GLY GLY SEQRES 4 D 84 GLY GLY GLY GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE SEQRES 5 D 84 PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 D 84 ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL SEQRES 7 D 84 LEU ARG LEU ARG GLY GLY HET ARS B 503 1 HET ARS C 501 1 HET ARS D 502 1 HETNAM ARS ARSENIC FORMUL 5 ARS 3(AS) FORMUL 8 HOH *361(H2 O) HELIX 1 1 THR A 22 GLU A 34 1 13 HELIX 2 2 PRO A 45 ASP A 47 5 3 HELIX 3 3 LEU A 64 ASN A 68 5 5 HELIX 4 4 THR B 22 GLU B 34 1 13 HELIX 5 5 PRO B 45 ASP B 47 5 3 HELIX 6 6 LEU B 64 ASN B 68 5 5 HELIX 7 7 THR C 22 GLU C 34 1 13 HELIX 8 8 PRO C 45 ASP C 47 5 3 HELIX 9 9 LEU C 64 ASN C 68 5 5 HELIX 10 10 THR D 22 GLY D 36 1 15 HELIX 11 11 PRO D 45 ASP D 47 5 3 HELIX 12 12 LEU D 64 ASN D 68 5 5 SHEET 1 A 5 THR A 12 GLU A 16 0 SHEET 2 A 5 GLN A 2 LYS A 6 -1 N ILE A 3 O LEU A 15 SHEET 3 A 5 THR A 74 LEU A 79 1 O LEU A 77 N LYS A 6 SHEET 4 A 5 GLN A 49 PHE A 53 -1 N ARG A 50 O VAL A 78 SHEET 5 A 5 LYS A 56 GLN A 57 -1 O LYS A 56 N PHE A 53 SHEET 1 B 5 THR B 12 GLU B 16 0 SHEET 2 B 5 GLN B 2 LYS B 6 -1 N ILE B 3 O LEU B 15 SHEET 3 B 5 THR B 74 LEU B 79 1 O LEU B 75 N PHE B 4 SHEET 4 B 5 GLN B 49 PHE B 53 -1 N ILE B 52 O HIS B 76 SHEET 5 B 5 LYS B 56 GLN B 57 -1 O LYS B 56 N PHE B 53 SHEET 1 C 5 THR C 12 GLU C 16 0 SHEET 2 C 5 GLN C 2 LYS C 6 -1 N VAL C 5 O ILE C 13 SHEET 3 C 5 THR C 74 LEU C 79 1 O LEU C 77 N LYS C 6 SHEET 4 C 5 GLN C 49 PHE C 53 -1 N ARG C 50 O VAL C 78 SHEET 5 C 5 LYS C 56 GLN C 57 -1 O LYS C 56 N PHE C 53 SHEET 1 D 5 THR D 12 GLU D 16 0 SHEET 2 D 5 GLN D 2 LYS D 6 -1 N ILE D 3 O LEU D 15 SHEET 3 D 5 THR D 74 LEU D 79 1 O LEU D 77 N LYS D 6 SHEET 4 D 5 GLN D 49 PHE D 53 -1 N ARG D 50 O VAL D 78 SHEET 5 D 5 LYS D 56 GLN D 57 -1 O LYS D 56 N PHE D 53 LINK OE1 GLU B 24 AS ARS B 503 1555 1555 2.14 LINK OD2 ASP B 47 AS ARS C 501 1555 1555 2.13 LINK OD1 ASP B 47 AS ARS C 501 1555 1555 2.35 LINK OD2 ASP B 60 AS ARS B 503 1555 1555 1.99 LINK AS ARS B 503 O HOH B 589 1555 1555 2.12 LINK AS ARS B 503 O HOH B 590 1555 1555 2.01 LINK AS ARS B 503 OD1 ASP C 47 1555 1555 2.40 LINK AS ARS B 503 OD2 ASP C 47 1555 1555 2.13 LINK OE1 GLU C 24 AS ARS C 501 1555 1555 2.05 LINK OD2 ASP C 60 AS ARS C 501 1555 1555 1.99 LINK AS ARS C 501 O HOH C 588 1555 1555 2.04 LINK AS ARS C 501 O HOH C 589 1555 1555 2.19 LINK OE1 GLU D 24 AS ARS D 502 1555 1555 2.05 LINK OD2 ASP D 60 AS ARS D 502 1555 1555 2.02 LINK AS ARS D 502 O HOH D 591 1555 1555 2.21 LINK AS ARS D 502 O HOH D 592 1555 1555 2.26 SITE 1 AC1 5 ASP B 47 GLU C 24 ASP C 60 HOH C 588 SITE 2 AC1 5 HOH C 589 SITE 1 AC2 4 GLU D 24 ASP D 60 HOH D 591 HOH D 592 SITE 1 AC3 5 GLU B 24 ASP B 60 HOH B 589 HOH B 590 SITE 2 AC3 5 ASP C 47 CRYST1 48.817 49.786 123.147 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020485 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020086 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008120 0.00000