HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-MAR-06 2GBO TITLE PROTEIN OF UNKNOWN FUNCTION EF2458 FROM ENTEROCOCCUS FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0358 PROTEIN EF2458; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: V583; SOURCE 5 GENE: EF_2458; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, HYPOTHETICAL PROTEIN, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,R.WU,M.BARGASSA,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 13-NOV-24 2GBO 1 SEQADV LINK REVDAT 3 13-JUL-11 2GBO 1 VERSN REVDAT 2 24-FEB-09 2GBO 1 VERSN REVDAT 1 11-APR-06 2GBO 0 JRNL AUTH J.OSIPIUK,R.WU,M.BARGASSA,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN JRNL TITL 2 EF_2458 FROM ENTEROCOCCUS FAECALIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 11997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1176 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 807 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1326 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 49.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.58000 REMARK 3 B22 (A**2) : 2.58000 REMARK 3 B33 (A**2) : -3.87000 REMARK 3 B12 (A**2) : 1.29000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.203 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.843 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1338 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1790 ; 1.535 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 162 ; 8.210 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;41.429 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 274 ;18.885 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.058 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 202 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 986 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 595 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 946 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 57 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 86 ; 0.262 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.118 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 835 ; 1.270 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1300 ; 1.804 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 549 ; 2.694 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 490 ; 4.241 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4221 -27.9028 28.4759 REMARK 3 T TENSOR REMARK 3 T11: 0.1141 T22: -0.1684 REMARK 3 T33: -0.0795 T12: -0.1388 REMARK 3 T13: -0.0086 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.8678 L22: 4.4821 REMARK 3 L33: 11.3801 L12: 1.9236 REMARK 3 L13: -1.6312 L23: -2.2682 REMARK 3 S TENSOR REMARK 3 S11: 0.0407 S12: -0.0417 S13: -0.2365 REMARK 3 S21: 0.1866 S22: -0.1441 S23: -0.5892 REMARK 3 S31: 0.8413 S32: -0.0650 S33: 0.1034 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 56 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5067 -22.3442 -14.7413 REMARK 3 T TENSOR REMARK 3 T11: -0.1938 T22: 0.1768 REMARK 3 T33: -0.1078 T12: 0.0026 REMARK 3 T13: 0.0251 T23: -0.0476 REMARK 3 L TENSOR REMARK 3 L11: 0.9680 L22: 1.5877 REMARK 3 L33: 12.7264 L12: 0.4766 REMARK 3 L13: -3.2052 L23: 0.1132 REMARK 3 S TENSOR REMARK 3 S11: 0.1332 S12: 0.2269 S13: 0.3122 REMARK 3 S21: 0.3268 S22: -0.2567 S23: 0.1521 REMARK 3 S31: 0.1525 S32: -0.0304 S33: 0.1234 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 57 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5779 -11.8899 -29.2720 REMARK 3 T TENSOR REMARK 3 T11: -0.1493 T22: -0.0042 REMARK 3 T33: 0.0020 T12: -0.0102 REMARK 3 T13: 0.0035 T23: 0.0779 REMARK 3 L TENSOR REMARK 3 L11: 6.1611 L22: 0.5902 REMARK 3 L33: 6.8416 L12: 1.7993 REMARK 3 L13: 1.0486 L23: -0.3503 REMARK 3 S TENSOR REMARK 3 S11: 0.2868 S12: 0.5598 S13: 1.1974 REMARK 3 S21: 0.0623 S22: -0.3857 S23: -0.1979 REMARK 3 S31: -0.6436 S32: -0.0563 S33: 0.0989 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 30 REMARK 3 ORIGIN FOR THE GROUP (A): 11.8490 -18.2260 -28.3251 REMARK 3 T TENSOR REMARK 3 T11: -0.2317 T22: 0.1540 REMARK 3 T33: -0.0778 T12: 0.0405 REMARK 3 T13: -0.0055 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 5.4009 L22: 0.5437 REMARK 3 L33: 15.4828 L12: -0.6593 REMARK 3 L13: 2.9314 L23: 2.1787 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: 0.1966 S13: 0.6026 REMARK 3 S21: -0.0160 S22: -0.0397 S23: -0.1528 REMARK 3 S31: -0.1338 S32: -0.6598 S33: -0.0038 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 31 B 56 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7474 -17.4795 14.8207 REMARK 3 T TENSOR REMARK 3 T11: 0.0960 T22: -0.0904 REMARK 3 T33: -0.1246 T12: -0.1657 REMARK 3 T13: 0.0251 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 0.8472 L22: 0.9555 REMARK 3 L33: 12.0568 L12: 0.1887 REMARK 3 L13: 0.4916 L23: 3.3887 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.3016 S13: -0.1854 REMARK 3 S21: 0.1374 S22: -0.1065 S23: -0.1455 REMARK 3 S31: -0.0878 S32: -0.2837 S33: 0.1180 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 57 B 82 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2884 -23.5608 29.4065 REMARK 3 T TENSOR REMARK 3 T11: -0.0757 T22: -0.0829 REMARK 3 T33: 0.0229 T12: -0.0583 REMARK 3 T13: -0.0857 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 2.5219 L22: 4.9058 REMARK 3 L33: 15.7627 L12: 3.4913 REMARK 3 L13: 0.0909 L23: 1.1934 REMARK 3 S TENSOR REMARK 3 S11: 0.0261 S12: 0.1770 S13: -0.5180 REMARK 3 S21: 0.5914 S22: -0.1330 S23: -1.1677 REMARK 3 S31: 0.2014 S32: 1.3277 S33: 0.1070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. R-FACTOR-ALL REMARK 3 CORRESPONDS TO REMARK 3 DEPOSITED FILE. R-WORK AND R-FREE FACTORS ARE TAKEN FROM SECOND TO REMARK 3 LAST ROUND OF REFINEMENT WHICH USED TEST DATA SET. REMARK 4 REMARK 4 2GBO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036927. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12040 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 39.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 15.90 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.2 REMARK 200 DATA REDUNDANCY IN SHELL : 8.40 REMARK 200 R MERGE FOR SHELL (I) : 0.66900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, MLPHARE, DM, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% (V/V) 2-METHYL-2,4-PENTANEDIOL, REMARK 280 0.1 M HEPES, 0.2 M NACL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.74733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.37367 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 94.74733 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.37367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE AUTHORS STATE THE REMARK 300 BIOLOGICAL UNIT IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 27.30700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -47.29711 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 109 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 119 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 LEU A 83 REMARK 465 TYR A 84 REMARK 465 THR A 85 REMARK 465 ASP A 86 REMARK 465 VAL A 87 REMARK 465 TYR A 88 REMARK 465 GLU A 89 REMARK 465 GLU A 90 REMARK 465 THR A 91 REMARK 465 GLN A 92 REMARK 465 GLU A 93 REMARK 465 LYS A 94 REMARK 465 ASN A 95 REMARK 465 GLU A 96 REMARK 465 ILE A 97 REMARK 465 GLY A 98 REMARK 465 LYS A 99 REMARK 465 GLU A 100 REMARK 465 GLY A 101 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 LEU B 83 REMARK 465 TYR B 84 REMARK 465 THR B 85 REMARK 465 ASP B 86 REMARK 465 VAL B 87 REMARK 465 TYR B 88 REMARK 465 GLU B 89 REMARK 465 GLU B 90 REMARK 465 THR B 91 REMARK 465 GLN B 92 REMARK 465 GLU B 93 REMARK 465 LYS B 94 REMARK 465 ASN B 95 REMARK 465 GLU B 96 REMARK 465 ILE B 97 REMARK 465 GLY B 98 REMARK 465 LYS B 99 REMARK 465 GLU B 100 REMARK 465 GLY B 101 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 122 O HOH A 127 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 3 -18.60 163.49 REMARK 500 ASN A 81 42.07 -92.04 REMARK 500 GLU B 3 -34.60 126.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 3 GLY A 4 143.61 REMARK 500 ASP B 2 GLU B 3 -124.68 REMARK 500 GLU B 3 GLY B 4 140.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC85101 RELATED DB: TARGETDB DBREF 2GBO A 1 101 UNP Q831P3 Y2458_ENTFA 1 101 DBREF 2GBO B 1 101 UNP Q831P3 Y2458_ENTFA 1 101 SEQADV 2GBO SER A -2 UNP Q831P3 CLONING ARTIFACT SEQADV 2GBO ASN A -1 UNP Q831P3 CLONING ARTIFACT SEQADV 2GBO ALA A 0 UNP Q831P3 CLONING ARTIFACT SEQADV 2GBO MSE A 1 UNP Q831P3 MET 1 MODIFIED RESIDUE SEQADV 2GBO MSE A 23 UNP Q831P3 MET 23 MODIFIED RESIDUE SEQADV 2GBO MSE A 48 UNP Q831P3 MET 48 MODIFIED RESIDUE SEQADV 2GBO SER B -2 UNP Q831P3 CLONING ARTIFACT SEQADV 2GBO ASN B -1 UNP Q831P3 CLONING ARTIFACT SEQADV 2GBO ALA B 0 UNP Q831P3 CLONING ARTIFACT SEQADV 2GBO MSE B 1 UNP Q831P3 MET 1 MODIFIED RESIDUE SEQADV 2GBO MSE B 23 UNP Q831P3 MET 23 MODIFIED RESIDUE SEQADV 2GBO MSE B 48 UNP Q831P3 MET 48 MODIFIED RESIDUE SEQRES 1 A 104 SER ASN ALA MSE ASP GLU GLY ILE SER LYS LYS PHE ALA SEQRES 2 A 104 ILE GLN LEU LEU GLU ASP ASP ALA GLU ARG ILE LYS MSE SEQRES 3 A 104 LEU ILE ARG ASN GLN LYS ASN SER LEU CYS ILE SER GLN SEQRES 4 A 104 CYS LYS ALA PHE GLU GLU VAL VAL ASP THR GLN MSE TYR SEQRES 5 A 104 GLY PHE SER ARG GLN VAL THR TYR ALA THR ARG LEU GLY SEQRES 6 A 104 ILE LEU THR ASN ASP GLU GLY HIS ARG LEU LEU SER ASP SEQRES 7 A 104 LEU GLU ARG GLU LEU ASN GLN LEU TYR THR ASP VAL TYR SEQRES 8 A 104 GLU GLU THR GLN GLU LYS ASN GLU ILE GLY LYS GLU GLY SEQRES 1 B 104 SER ASN ALA MSE ASP GLU GLY ILE SER LYS LYS PHE ALA SEQRES 2 B 104 ILE GLN LEU LEU GLU ASP ASP ALA GLU ARG ILE LYS MSE SEQRES 3 B 104 LEU ILE ARG ASN GLN LYS ASN SER LEU CYS ILE SER GLN SEQRES 4 B 104 CYS LYS ALA PHE GLU GLU VAL VAL ASP THR GLN MSE TYR SEQRES 5 B 104 GLY PHE SER ARG GLN VAL THR TYR ALA THR ARG LEU GLY SEQRES 6 B 104 ILE LEU THR ASN ASP GLU GLY HIS ARG LEU LEU SER ASP SEQRES 7 B 104 LEU GLU ARG GLU LEU ASN GLN LEU TYR THR ASP VAL TYR SEQRES 8 B 104 GLU GLU THR GLN GLU LYS ASN GLU ILE GLY LYS GLU GLY MODRES 2GBO MSE A 1 MET SELENOMETHIONINE MODRES 2GBO MSE A 23 MET SELENOMETHIONINE MODRES 2GBO MSE A 48 MET SELENOMETHIONINE MODRES 2GBO MSE B 1 MET SELENOMETHIONINE MODRES 2GBO MSE B 23 MET SELENOMETHIONINE MODRES 2GBO MSE B 48 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 23 8 HET MSE A 48 8 HET MSE B 1 8 HET MSE B 23 8 HET MSE B 48 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *56(H2 O) HELIX 1 1 GLU A 3 ASN A 30 1 28 HELIX 2 2 LEU A 32 LEU A 61 1 30 HELIX 3 3 THR A 65 ASN A 81 1 17 HELIX 4 4 GLU B 3 ASN B 30 1 28 HELIX 5 5 LEU B 32 LEU B 61 1 30 HELIX 6 6 THR B 65 ASN B 81 1 17 SSBOND 1 CYS A 33 CYS B 37 1555 1555 2.10 SSBOND 2 CYS A 37 CYS B 33 1555 1555 2.07 LINK C MSE A 1 N ASP A 2 1555 1555 1.33 LINK C LYS A 22 N MSE A 23 1555 1555 1.33 LINK C MSE A 23 N LEU A 24 1555 1555 1.33 LINK C GLN A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N TYR A 49 1555 1555 1.33 LINK C MSE B 1 N ASP B 2 1555 1555 1.34 LINK C LYS B 22 N MSE B 23 1555 1555 1.34 LINK C MSE B 23 N LEU B 24 1555 1555 1.34 LINK C GLN B 47 N MSE B 48 1555 1555 1.33 LINK C MSE B 48 N TYR B 49 1555 1555 1.33 CRYST1 54.614 54.614 142.121 90.00 90.00 120.00 P 62 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018310 0.010571 0.000000 0.00000 SCALE2 0.000000 0.021143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007036 0.00000 HETATM 1 N MSE A 1 14.593 -26.204 52.552 1.00 90.01 N HETATM 2 CA MSE A 1 13.193 -26.424 52.082 1.00 90.25 C HETATM 3 C MSE A 1 13.164 -27.117 50.718 1.00 88.66 C HETATM 4 O MSE A 1 14.011 -26.838 49.855 1.00 88.75 O HETATM 5 CB MSE A 1 12.448 -25.082 52.005 1.00 90.49 C HETATM 6 CG MSE A 1 10.926 -25.215 52.164 1.00 91.97 C HETATM 7 SE MSE A 1 9.993 -23.504 52.466 0.50 92.63 SE HETATM 8 CE MSE A 1 8.169 -24.220 52.669 1.00 92.24 C