HEADER HYDROLASE 22-MAR-06 2GFO TITLE STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN UBIQUITIN CARBOXYL-TERMINAL TITLE 2 HYDROLASE 8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: UBIQUITIN THIOLESTERASE 8, UBIQUITIN-SPECIFIC PROCESSING COMPND 6 PROTEASE 8, DEUBIQUITINATING ENZYME 8, HUBPY; COMPND 7 EC: 3.1.2.15; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: USP8, KIAA0055, UBPY; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-LIC KEYWDS HYDROLASE, PROTEASE, THIOL PROTEASE, UBL CONJUGATION PATHWAY, KEYWDS 2 DEUBIQUITINATING ENZYME, DUB, ZINC RIBBON, STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,G.V.AVVAKUMOV,S.XUE,E.M.NEWMAN,P.J.FINERTY JR.,C.BUTLER- AUTHOR 2 COLE,J.WEIGELT,M.SUNDSTROM,C.ARROWSMITH,A.EDWARDS,A.BOCHKAREV,S.DHE- AUTHOR 3 PAGANON,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 7 20-NOV-24 2GFO 1 REMARK SEQADV LINK REVDAT 6 24-JAN-18 2GFO 1 AUTHOR REVDAT 5 13-JUL-11 2GFO 1 VERSN REVDAT 4 24-FEB-09 2GFO 1 VERSN REVDAT 3 12-DEC-06 2GFO 1 JRNL REVDAT 2 11-APR-06 2GFO 1 AUTHOR REVDAT 1 04-APR-06 2GFO 0 JRNL AUTH G.V.AVVAKUMOV,J.R.WALKER,S.XUE,P.J.FINERTY JR.,F.MACKENZIE, JRNL AUTH 2 E.M.NEWMAN,S.DHE-PAGANON JRNL TITL AMINO-TERMINAL DIMERIZATION, NRDP1-RHODANESE INTERACTION, JRNL TITL 2 AND INHIBITED CATALYTIC DOMAIN CONFORMATION OF THE JRNL TITL 3 UBIQUITIN-SPECIFIC PROTEASE 8 (USP8). JRNL REF J.BIOL.CHEM. V. 281 38061 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 17035239 JRNL DOI 10.1074/JBC.M606704200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 31452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1684 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2279 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2746 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.12000 REMARK 3 B22 (A**2) : 1.12000 REMARK 3 B33 (A**2) : -1.68000 REMARK 3 B12 (A**2) : 0.56000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.948 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2810 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3789 ; 1.498 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 337 ; 5.855 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;32.312 ;24.184 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;15.072 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;19.789 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 402 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2138 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1131 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1901 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 165 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.127 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.183 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1734 ; 2.245 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2698 ; 3.078 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1237 ; 4.711 ; 5.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1091 ; 6.218 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 762 A 770 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6651 -3.1017 2.2802 REMARK 3 T TENSOR REMARK 3 T11: 0.2195 T22: -0.1038 REMARK 3 T33: 0.0954 T12: 0.0062 REMARK 3 T13: 0.0669 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 24.7502 L22: 7.0729 REMARK 3 L33: 8.3704 L12: -4.8687 REMARK 3 L13: 3.9873 L23: -5.5014 REMARK 3 S TENSOR REMARK 3 S11: 0.2057 S12: 0.4987 S13: -0.9365 REMARK 3 S21: -0.3960 S22: -0.0937 S23: 0.6343 REMARK 3 S31: 0.7285 S32: -0.3733 S33: -0.1121 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 771 A 795 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6052 11.0625 4.1261 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.0370 REMARK 3 T33: 0.0993 T12: 0.0004 REMARK 3 T13: 0.0415 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.7008 L22: 2.9455 REMARK 3 L33: 3.9002 L12: -0.1276 REMARK 3 L13: -0.0734 L23: 0.0321 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: -0.0593 S13: -0.0560 REMARK 3 S21: -0.0488 S22: 0.0526 S23: -0.1054 REMARK 3 S31: 0.1438 S32: 0.2011 S33: 0.0005 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 796 A 822 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8945 8.6524 11.6145 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.0425 REMARK 3 T33: 0.0787 T12: -0.0256 REMARK 3 T13: 0.0292 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 2.5471 L22: 2.3197 REMARK 3 L33: 4.6330 L12: 0.2510 REMARK 3 L13: 0.2248 L23: -0.6259 REMARK 3 S TENSOR REMARK 3 S11: -0.1630 S12: 0.0793 S13: -0.2957 REMARK 3 S21: -0.2863 S22: 0.1285 S23: 0.2907 REMARK 3 S31: 0.3031 S32: -0.5207 S33: 0.0345 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 823 A 860 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3809 6.5660 2.6265 REMARK 3 T TENSOR REMARK 3 T11: 0.1504 T22: 0.0098 REMARK 3 T33: 0.0898 T12: -0.0228 REMARK 3 T13: 0.0466 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.7082 L22: 1.8627 REMARK 3 L33: 3.5092 L12: -0.8268 REMARK 3 L13: 0.3838 L23: -0.7016 REMARK 3 S TENSOR REMARK 3 S11: -0.0954 S12: 0.1138 S13: -0.1271 REMARK 3 S21: -0.0586 S22: -0.0116 S23: 0.0671 REMARK 3 S31: 0.1910 S32: -0.1292 S33: 0.1070 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 861 A 885 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4709 18.0063 0.8463 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.0327 REMARK 3 T33: 0.0320 T12: 0.0068 REMARK 3 T13: 0.0168 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.8389 L22: 0.7628 REMARK 3 L33: 2.1101 L12: 0.5188 REMARK 3 L13: -1.6926 L23: 0.1950 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: 0.1491 S13: 0.0871 REMARK 3 S21: -0.0690 S22: 0.0655 S23: 0.0031 REMARK 3 S31: -0.1745 S32: -0.1949 S33: -0.0626 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 886 A 900 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7086 29.0825 13.7114 REMARK 3 T TENSOR REMARK 3 T11: 0.1188 T22: 0.0940 REMARK 3 T33: 0.1441 T12: 0.1712 REMARK 3 T13: 0.0169 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 5.4124 L22: 72.2246 REMARK 3 L33: 4.3131 L12: -14.1614 REMARK 3 L13: -2.6672 L23: 15.8834 REMARK 3 S TENSOR REMARK 3 S11: 0.0007 S12: 0.1626 S13: -0.1931 REMARK 3 S21: -2.0763 S22: -0.6588 S23: 3.6381 REMARK 3 S31: -0.8635 S32: -0.9042 S33: 0.6581 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 901 A 913 REMARK 3 ORIGIN FOR THE GROUP (A): -17.2816 33.4166 19.3532 REMARK 3 T TENSOR REMARK 3 T11: 0.0476 T22: 0.0663 REMARK 3 T33: 0.0389 T12: 0.1837 REMARK 3 T13: 0.0796 T23: 0.0556 REMARK 3 L TENSOR REMARK 3 L11: 7.1955 L22: 26.5811 REMARK 3 L33: 7.3459 L12: 2.2968 REMARK 3 L13: 0.5520 L23: 6.7481 REMARK 3 S TENSOR REMARK 3 S11: -0.3754 S12: -0.2572 S13: 0.2280 REMARK 3 S21: 0.5436 S22: 0.2513 S23: 0.6335 REMARK 3 S31: -0.4555 S32: -0.6220 S33: 0.1241 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 914 A 929 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3676 21.1667 14.5647 REMARK 3 T TENSOR REMARK 3 T11: 0.0484 T22: 0.0595 REMARK 3 T33: 0.0282 T12: 0.0378 REMARK 3 T13: 0.0472 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: 2.3614 L22: 6.0623 REMARK 3 L33: 2.3831 L12: 1.0832 REMARK 3 L13: 0.9747 L23: 0.6119 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: 0.0840 S13: 0.0270 REMARK 3 S21: 0.2113 S22: -0.0453 S23: 0.4344 REMARK 3 S31: -0.0317 S32: -0.4127 S33: -0.0035 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 930 A 945 REMARK 3 ORIGIN FOR THE GROUP (A): -12.1434 44.7949 7.5008 REMARK 3 T TENSOR REMARK 3 T11: 0.1493 T22: -0.0287 REMARK 3 T33: 0.0713 T12: 0.1191 REMARK 3 T13: 0.1412 T23: 0.0921 REMARK 3 L TENSOR REMARK 3 L11: 3.3206 L22: 11.8780 REMARK 3 L33: 7.4842 L12: -5.2665 REMARK 3 L13: 4.9078 L23: -8.6853 REMARK 3 S TENSOR REMARK 3 S11: -0.2230 S12: -0.0552 S13: -0.0894 REMARK 3 S21: 0.1501 S22: 0.1922 S23: 0.0220 REMARK 3 S31: -0.1909 S32: -0.1963 S33: 0.0308 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 946 A 951 REMARK 3 ORIGIN FOR THE GROUP (A): -6.2266 29.5555 11.0313 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.0335 REMARK 3 T33: 0.0232 T12: 0.0436 REMARK 3 T13: 0.0470 T23: 0.0801 REMARK 3 L TENSOR REMARK 3 L11: 14.3224 L22: 13.1636 REMARK 3 L33: 7.9752 L12: -10.0433 REMARK 3 L13: -8.2298 L23: 7.4513 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: 0.4477 S13: -0.1882 REMARK 3 S21: -0.1713 S22: -0.0309 S23: 0.4006 REMARK 3 S31: -0.0274 S32: -0.2391 S33: 0.0042 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 952 A 973 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8388 38.5453 11.4078 REMARK 3 T TENSOR REMARK 3 T11: 0.1936 T22: -0.1156 REMARK 3 T33: 0.1062 T12: -0.0553 REMARK 3 T13: 0.0787 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 6.4664 L22: 3.5455 REMARK 3 L33: 2.9663 L12: -0.7456 REMARK 3 L13: -1.6856 L23: -0.4503 REMARK 3 S TENSOR REMARK 3 S11: 0.1279 S12: -0.3034 S13: 0.6504 REMARK 3 S21: 0.0485 S22: 0.1878 S23: -0.0531 REMARK 3 S31: -0.7918 S32: 0.1756 S33: -0.3156 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 974 A 983 REMARK 3 ORIGIN FOR THE GROUP (A): -6.5385 42.3709 -1.8580 REMARK 3 T TENSOR REMARK 3 T11: 0.4080 T22: 0.0114 REMARK 3 T33: 0.0600 T12: 0.3300 REMARK 3 T13: 0.3281 T23: 0.0963 REMARK 3 L TENSOR REMARK 3 L11: 25.5465 L22: 9.2222 REMARK 3 L33: 7.1496 L12: 6.1590 REMARK 3 L13: 12.3190 L23: -0.0887 REMARK 3 S TENSOR REMARK 3 S11: 0.4208 S12: 2.7427 S13: -0.6573 REMARK 3 S21: -1.1110 S22: -0.1574 S23: -0.5778 REMARK 3 S31: 1.6225 S32: 2.1013 S33: -0.2634 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 984 A 1002 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6175 41.9923 4.9704 REMARK 3 T TENSOR REMARK 3 T11: 0.1958 T22: -0.1066 REMARK 3 T33: 0.0182 T12: 0.0783 REMARK 3 T13: 0.1107 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 3.9689 L22: 7.5073 REMARK 3 L33: 6.4137 L12: -4.2438 REMARK 3 L13: 4.7386 L23: -5.3309 REMARK 3 S TENSOR REMARK 3 S11: 0.3671 S12: 0.2324 S13: -0.0325 REMARK 3 S21: -0.7923 S22: -0.2398 S23: 0.0566 REMARK 3 S31: 0.5742 S32: 0.1782 S33: -0.1273 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1003 A 1021 REMARK 3 ORIGIN FOR THE GROUP (A): 6.7303 31.4072 2.1651 REMARK 3 T TENSOR REMARK 3 T11: 0.1813 T22: -0.0198 REMARK 3 T33: 0.0496 T12: 0.0255 REMARK 3 T13: 0.0543 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 3.6500 L22: 1.5913 REMARK 3 L33: 6.1379 L12: 0.8872 REMARK 3 L13: -4.4642 L23: -0.7465 REMARK 3 S TENSOR REMARK 3 S11: 0.2237 S12: 0.5438 S13: 0.3199 REMARK 3 S21: -0.3759 S22: 0.1243 S23: -0.0889 REMARK 3 S31: -0.6816 S32: -0.6056 S33: -0.3479 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1022 A 1048 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2544 32.8649 17.9378 REMARK 3 T TENSOR REMARK 3 T11: 0.1281 T22: -0.0529 REMARK 3 T33: 0.0649 T12: -0.0425 REMARK 3 T13: 0.0139 T23: -0.0473 REMARK 3 L TENSOR REMARK 3 L11: 1.9558 L22: 2.1045 REMARK 3 L33: 2.0993 L12: -1.0921 REMARK 3 L13: -0.4729 L23: -0.1880 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: -0.3976 S13: 0.2558 REMARK 3 S21: 0.1645 S22: 0.2363 S23: -0.1441 REMARK 3 S31: -0.2815 S32: 0.3042 S33: -0.2214 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1049 A 1109 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0224 19.6753 11.6985 REMARK 3 T TENSOR REMARK 3 T11: 0.0421 T22: 0.0613 REMARK 3 T33: 0.0995 T12: -0.0182 REMARK 3 T13: 0.0127 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 1.8430 L22: 1.9848 REMARK 3 L33: 2.3273 L12: -0.1267 REMARK 3 L13: -0.5604 L23: 0.3474 REMARK 3 S TENSOR REMARK 3 S11: -0.0165 S12: -0.2107 S13: 0.0362 REMARK 3 S21: -0.0284 S22: 0.0875 S23: -0.2668 REMARK 3 S31: -0.0737 S32: 0.3554 S33: -0.0710 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GFO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000037058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97896 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33281 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 18.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG3350; 0.1 M BIS-TRIS, PH 6.3, REMARK 280 0.2 M KSCN, 1 MM DTT., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.81933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 129.63867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.22900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 162.04833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.40967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 715 REMARK 465 GLY A 716 REMARK 465 SER A 717 REMARK 465 SER A 718 REMARK 465 HIS A 719 REMARK 465 HIS A 720 REMARK 465 HIS A 721 REMARK 465 HIS A 722 REMARK 465 HIS A 723 REMARK 465 HIS A 724 REMARK 465 SER A 725 REMARK 465 SER A 726 REMARK 465 GLY A 727 REMARK 465 LEU A 728 REMARK 465 VAL A 729 REMARK 465 PRO A 730 REMARK 465 ARG A 731 REMARK 465 GLY A 732 REMARK 465 SER A 733 REMARK 465 PRO A 734 REMARK 465 THR A 735 REMARK 465 VAL A 736 REMARK 465 THR A 737 REMARK 465 PRO A 738 REMARK 465 THR A 739 REMARK 465 VAL A 740 REMARK 465 ASN A 741 REMARK 465 ARG A 742 REMARK 465 GLU A 743 REMARK 465 ASN A 744 REMARK 465 LYS A 745 REMARK 465 PRO A 746 REMARK 465 THR A 747 REMARK 465 CYS A 748 REMARK 465 TYR A 749 REMARK 465 PRO A 750 REMARK 465 LYS A 751 REMARK 465 ALA A 752 REMARK 465 GLU A 753 REMARK 465 ILE A 754 REMARK 465 SER A 755 REMARK 465 ARG A 756 REMARK 465 LEU A 757 REMARK 465 SER A 758 REMARK 465 ALA A 759 REMARK 465 SER A 760 REMARK 465 GLN A 761 REMARK 465 ASN A 889 REMARK 465 ARG A 890 REMARK 465 LYS A 891 REMARK 465 ARG A 892 REMARK 465 TYR A 893 REMARK 465 LYS A 894 REMARK 465 GLU A 895 REMARK 465 GLU A 896 REMARK 465 ASN A 897 REMARK 465 GLY A 1110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 796 CB CYS A 796 SG 0.138 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 938 -60.52 -91.88 REMARK 500 ASP A 979 -104.28 -90.81 REMARK 500 ARG A1019 -34.22 -137.55 REMARK 500 LYS A1045 57.80 -114.52 REMARK 500 ASP A1085 -118.35 53.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 936 SG REMARK 620 2 CYS A 939 SG 108.3 REMARK 620 3 CYS A 985 SG 108.7 102.9 REMARK 620 4 CYS A 988 SG 111.5 111.7 113.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A9U RELATED DB: PDB REMARK 900 STRUCTURE OF THE N-TERMINAL DOMAIN OF THE HUMAN UBIQUITIN CARBOXYL- REMARK 900 TERMINAL HYDROLASE 8 (USP8) REMARK 900 RELATED ID: 1WHB RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE RHODANESE-LIKE DOMAIN IN HUMAN UBIQUITIN REMARK 900 SPECIFIC PROTEASE 8 (UBP8) REMARK 900 RELATED ID: 2FZP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE USP8 INTERACTION DOMAIN OF HUMAN NRDP1 DBREF 2GFO A 734 1110 UNP P40818 UBP8_HUMAN 734 1110 SEQADV 2GFO MSE A 715 UNP P40818 CLONING ARTIFACT SEQADV 2GFO GLY A 716 UNP P40818 CLONING ARTIFACT SEQADV 2GFO SER A 717 UNP P40818 CLONING ARTIFACT SEQADV 2GFO SER A 718 UNP P40818 CLONING ARTIFACT SEQADV 2GFO HIS A 719 UNP P40818 EXPRESSION TAG SEQADV 2GFO HIS A 720 UNP P40818 EXPRESSION TAG SEQADV 2GFO HIS A 721 UNP P40818 EXPRESSION TAG SEQADV 2GFO HIS A 722 UNP P40818 EXPRESSION TAG SEQADV 2GFO HIS A 723 UNP P40818 EXPRESSION TAG SEQADV 2GFO HIS A 724 UNP P40818 EXPRESSION TAG SEQADV 2GFO SER A 725 UNP P40818 CLONING ARTIFACT SEQADV 2GFO SER A 726 UNP P40818 CLONING ARTIFACT SEQADV 2GFO GLY A 727 UNP P40818 CLONING ARTIFACT SEQADV 2GFO LEU A 728 UNP P40818 CLONING ARTIFACT SEQADV 2GFO VAL A 729 UNP P40818 CLONING ARTIFACT SEQADV 2GFO PRO A 730 UNP P40818 CLONING ARTIFACT SEQADV 2GFO ARG A 731 UNP P40818 CLONING ARTIFACT SEQADV 2GFO GLY A 732 UNP P40818 CLONING ARTIFACT SEQADV 2GFO SER A 733 UNP P40818 CLONING ARTIFACT SEQADV 2GFO MSE A 788 UNP P40818 MET 788 MODIFIED RESIDUE SEQADV 2GFO MSE A 834 UNP P40818 MET 834 MODIFIED RESIDUE SEQADV 2GFO MSE A 877 UNP P40818 MET 877 MODIFIED RESIDUE SEQADV 2GFO MSE A 950 UNP P40818 MET 950 MODIFIED RESIDUE SEQRES 1 A 396 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 396 LEU VAL PRO ARG GLY SER PRO THR VAL THR PRO THR VAL SEQRES 3 A 396 ASN ARG GLU ASN LYS PRO THR CYS TYR PRO LYS ALA GLU SEQRES 4 A 396 ILE SER ARG LEU SER ALA SER GLN ILE ARG ASN LEU ASN SEQRES 5 A 396 PRO VAL PHE GLY GLY SER GLY PRO ALA LEU THR GLY LEU SEQRES 6 A 396 ARG ASN LEU GLY ASN THR CYS TYR MSE ASN SER ILE LEU SEQRES 7 A 396 GLN CYS LEU CYS ASN ALA PRO HIS LEU ALA ASP TYR PHE SEQRES 8 A 396 ASN ARG ASN CYS TYR GLN ASP ASP ILE ASN ARG SER ASN SEQRES 9 A 396 LEU LEU GLY HIS LYS GLY GLU VAL ALA GLU GLU PHE GLY SEQRES 10 A 396 ILE ILE MSE LYS ALA LEU TRP THR GLY GLN TYR ARG TYR SEQRES 11 A 396 ILE SER PRO LYS ASP PHE LYS ILE THR ILE GLY LYS ILE SEQRES 12 A 396 ASN ASP GLN PHE ALA GLY TYR SER GLN GLN ASP SER GLN SEQRES 13 A 396 GLU LEU LEU LEU PHE LEU MSE ASP GLY LEU HIS GLU ASP SEQRES 14 A 396 LEU ASN LYS ALA ASP ASN ARG LYS ARG TYR LYS GLU GLU SEQRES 15 A 396 ASN ASN ASP HIS LEU ASP ASP PHE LYS ALA ALA GLU HIS SEQRES 16 A 396 ALA TRP GLN LYS HIS LYS GLN LEU ASN GLU SER ILE ILE SEQRES 17 A 396 VAL ALA LEU PHE GLN GLY GLN PHE LYS SER THR VAL GLN SEQRES 18 A 396 CYS LEU THR CYS HIS LYS LYS SER ARG THR PHE GLU ALA SEQRES 19 A 396 PHE MSE TYR LEU SER LEU PRO LEU ALA SER THR SER LYS SEQRES 20 A 396 CYS THR LEU GLN ASP CYS LEU ARG LEU PHE SER LYS GLU SEQRES 21 A 396 GLU LYS LEU THR ASP ASN ASN ARG PHE TYR CYS SER HIS SEQRES 22 A 396 CYS ARG ALA ARG ARG ASP SER LEU LYS LYS ILE GLU ILE SEQRES 23 A 396 TRP LYS LEU PRO PRO VAL LEU LEU VAL HIS LEU LYS ARG SEQRES 24 A 396 PHE SER TYR ASP GLY ARG TRP LYS GLN LYS LEU GLN THR SEQRES 25 A 396 SER VAL ASP PHE PRO LEU GLU ASN LEU ASP LEU SER GLN SEQRES 26 A 396 TYR VAL ILE GLY PRO LYS ASN ASN LEU LYS LYS TYR ASN SEQRES 27 A 396 LEU PHE SER VAL SER ASN HIS TYR GLY GLY LEU ASP GLY SEQRES 28 A 396 GLY HIS TYR THR ALA TYR CYS LYS ASN ALA ALA ARG GLN SEQRES 29 A 396 ARG TRP PHE LYS PHE ASP ASP HIS GLU VAL SER ASP ILE SEQRES 30 A 396 SER VAL SER SER VAL LYS SER SER ALA ALA TYR ILE LEU SEQRES 31 A 396 PHE TYR THR SER LEU GLY MODRES 2GFO MSE A 788 MET SELENOMETHIONINE MODRES 2GFO MSE A 834 MET SELENOMETHIONINE MODRES 2GFO MSE A 877 MET SELENOMETHIONINE MODRES 2GFO MSE A 950 MET SELENOMETHIONINE HET MSE A 788 8 HET MSE A 834 8 HET MSE A 877 8 HET MSE A 950 8 HET ZN A1200 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *191(H2 O) HELIX 1 1 ILE A 762 ASN A 766 5 5 HELIX 2 2 THR A 785 ASN A 797 1 13 HELIX 3 3 ALA A 798 ARG A 807 1 10 HELIX 4 4 CYS A 809 ILE A 814 1 6 HELIX 5 5 GLY A 824 GLY A 840 1 17 HELIX 6 6 PRO A 847 ASN A 858 1 12 HELIX 7 7 ASP A 859 ALA A 862 5 4 HELIX 8 8 ASP A 868 ASN A 885 1 18 HELIX 9 9 ASP A 902 ASN A 918 1 17 HELIX 10 10 SER A 920 GLN A 927 1 8 HELIX 11 11 LEU A 964 SER A 972 1 9 HELIX 12 12 LEU A 1037 VAL A 1041 5 5 HELIX 13 13 SER A 1092 VAL A 1096 5 5 SHEET 1 A 3 VAL A 768 PHE A 769 0 SHEET 2 A 3 TYR A 842 ILE A 845 -1 O ARG A 843 N VAL A 768 SHEET 3 A 3 GLY A 778 LEU A 779 1 N GLY A 778 O ARG A 843 SHEET 1 B 4 LYS A 942 PHE A 949 0 SHEET 2 B 4 GLY A 928 CYS A 936 -1 N SER A 932 O THR A 945 SHEET 3 B 4 SER A 994 LYS A1002 -1 O LEU A 995 N GLN A 935 SHEET 4 B 4 GLU A 975 LEU A 977 -1 N LEU A 977 O SER A 994 SHEET 1 C 7 LEU A 952 LEU A 954 0 SHEET 2 C 7 VAL A1006 LEU A1011 1 O HIS A1010 N LEU A 952 SHEET 3 C 7 ALA A1101 THR A1107 -1 O LEU A1104 N VAL A1009 SHEET 4 C 7 ASN A1052 TYR A1060 -1 N PHE A1054 O PHE A1105 SHEET 5 C 7 HIS A1067 ASN A1074 -1 O LYS A1073 N PHE A1054 SHEET 6 C 7 ARG A1079 ASP A1084 -1 O PHE A1083 N ALA A1070 SHEET 7 C 7 GLU A1087 ASP A1090 -1 O SER A1089 N LYS A1082 SHEET 1 D 2 LYS A 961 THR A 963 0 SHEET 2 D 2 SER A1027 ASP A1029 1 O ASP A1029 N CYS A 962 SHEET 1 E 2 PHE A 983 CYS A 985 0 SHEET 2 E 2 ALA A 990 ARG A 992 -1 O ARG A 992 N PHE A 983 SHEET 1 F 2 PHE A1014 TYR A1016 0 SHEET 2 F 2 LYS A1021 LYS A1023 -1 O GLN A1022 N SER A1015 LINK C TYR A 787 N MSE A 788 1555 1555 1.34 LINK C MSE A 788 N ASN A 789 1555 1555 1.33 LINK C ILE A 833 N MSE A 834 1555 1555 1.33 LINK C MSE A 834 N LYS A 835 1555 1555 1.31 LINK C LEU A 876 N MSE A 877 1555 1555 1.32 LINK C MSE A 877 N ASP A 878 1555 1555 1.33 LINK C PHE A 949 N MSE A 950 1555 1555 1.34 LINK C MSE A 950 N TYR A 951 1555 1555 1.33 LINK SG CYS A 936 ZN ZN A1200 1555 1555 2.28 LINK SG CYS A 939 ZN ZN A1200 1555 1555 2.32 LINK SG CYS A 985 ZN ZN A1200 1555 1555 2.43 LINK SG CYS A 988 ZN ZN A1200 1555 1555 2.41 SITE 1 AC1 4 CYS A 936 CYS A 939 CYS A 985 CYS A 988 CRYST1 67.173 67.173 194.458 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014887 0.008595 0.000000 0.00000 SCALE2 0.000000 0.017190 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005142 0.00000